Name 2CYKDmKoMH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmWNELDmGQzmRo_1
Workunit 239509353
Created 2 Mar 2026, 21:16:05 UTC
Sent 2 Mar 2026, 21:28:16 UTC
Report deadline 10 Mar 2026, 21:28:16 UTC
Received 4 Mar 2026, 0:37:55 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 11036243
Run time 1 hours 40 min 31 sec
CPU time 6 hours 27 min 32 sec
Priority 28
Validate state Valid
Credit 394.65
Device peak FLOPS 4.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.43 GB
Peak swap size 2.84 GB
Peak disk usage 753.21 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:56:08 (681354): wrapper (7.7.26015): starting
22:56:08 (681354): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 22:56:08] Arguments: --nthreads 4
[2026-03-03 22:56:08] Threads: 4
[2026-03-03 22:56:08] Checking for CVMFS
[2026-03-03 22:56:08] No cvmfs_config command found, will try listing directly
[2026-03-03 22:56:08] CVMFS is ok
[2026-03-03 22:56:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 22:56:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 22:56:08] Further information can be found at the LHC@home message board.
[2026-03-03 22:56:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 22:56:08] Checking for apptainer binary...
[2026-03-03 22:56:08] which: no apptainer in ((null))
[2026-03-03 22:56:08] apptainer is not installed, using version from CVMFS
[2026-03-03 22:56:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 22:56:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-03 22:56:09] apptainer works
[2026-03-03 22:56:09] Set ATHENA_PROC_NUMBER=4
[2026-03-03 22:56:09] Set ATHENA_CORE_NUMBER=4
[2026-03-03 22:56:09] Starting ATLAS job with PandaID=7036056757
[2026-03-03 22:56:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 00:36:37]  *** The last 200 lines of the pilot log: ***
[2026-03-04 00:36:37]  lfn=log.48838586._002015.job.log.tgz.1
[2026-03-04 00:36:37]  mtime=0
[2026-03-04 00:36:37]  protocol_id=None
[2026-03-04 00:36:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-04 00:36:37]  replicas=None
[2026-03-04 00:36:37]  scope=mc23_13p6TeV
[2026-03-04 00:36:37]  status=None
[2026-03-04 00:36:37]  status_code=0
[2026-03-04 00:36:37]  storage_token=
[2026-03-04 00:36:37]  surl=/var/lib/boinc/var/slot92/slots/0/PanDA_Pilot-7036056757/log.48838586._002015.job.log.tgz.1
[2026-03-04 00:36:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/0c/log.48838586._002015.job.log.tgz.1
[2026-03-04 00:36:37]  workdir=None
[2026-03-04 00:36:37] ]
[2026-03-04 00:36:37] 2026-03-03 23:35:26,276 | INFO     | transferring file log.48838586._002015.job.log.tgz.1 from /var/lib/boinc/var/slot92/slots/0/PanDA_Pilot-7036056757/log.48838586._002015.job.log.tgz.1 to /var/lib/b
[2026-03-04 00:36:37] 2026-03-03 23:35:26,276 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot92/slots/0/PanDA_Pilot-7036056757/log.48838586._002015.job.log.tgz.1 /var/lib/boinc/var/slot92/slots/0/lo
[2026-03-04 00:36:37] 2026-03-03 23:35:26,291 | INFO     | adding to output.list: log.48838586._002015.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/0c/log.48838586._002015.job.log.tg
[2026-03-04 00:36:37] 2026-03-03 23:35:26,292 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-04 00:36:37] 2026-03-03 23:35:26,292 | INFO     | summary of transferred files:
[2026-03-04 00:36:37] 2026-03-03 23:35:26,292 | INFO     |  -- lfn=log.48838586._002015.job.log.tgz.1, status_code=0, status=transferred
[2026-03-04 00:36:37] 2026-03-03 23:35:26,292 | INFO     | stage-out finished correctly
[2026-03-04 00:36:37] 2026-03-03 23:35:26,509 | WARNING  | process 698891 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 00:36:37] 2026-03-03 23:35:26,509 | INFO     | using path: /var/lib/boinc/var/slot92/slots/0/PanDA_Pilot-7036056757/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 00:36:37] 2026-03-03 23:35:26,973 | INFO     | number of running child processes to parent process 698891: 1
[2026-03-04 00:36:37] 2026-03-03 23:35:26,974 | INFO     | maximum number of monitored processes: 6
[2026-03-04 00:36:37] 2026-03-03 23:35:27,674 | INFO     | time since job start (5946s) is within the limit (349056.0s)
[2026-03-04 00:36:37] 2026-03-03 23:35:29,477 | INFO     | monitor loop #424: job 0:7036056757 is in state 'finished'
[2026-03-04 00:36:37] 2026-03-03 23:35:29,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-04 00:36:37] 2026-03-03 23:35:29,568 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-04 00:36:37] 2026-03-03 23:35:29,679 | INFO     | time since job start (5948s) is within the limit (349056.0s)
[2026-03-04 00:36:37] 2026-03-03 23:35:30,016 | INFO     | job 7036056757 has state=finished
[2026-03-04 00:36:37] 2026-03-03 23:35:30,016 | INFO     | preparing for final server update for job 7036056757 in state='finished'
[2026-03-04 00:36:37] 2026-03-03 23:35:30,016 | INFO     | reading metadata from: /var/lib/boinc/var/slot92/slots/0/PanDA_Pilot-7036056757/jobReport.json
[2026-03-04 00:36:37] 2026-03-03 23:35:30,021 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot92/slots/0/workernode_map.json
[2026-03-04 00:36:37] 2026-03-03 23:35:30,021 | INFO     | this job has now completed (state=finished)
[2026-03-04 00:36:37] 2026-03-03 23:35:30,021 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 00:36:37] 2026-03-03 23:35:30,021 | INFO     | log transfer has been attempted: DONE
[2026-03-04 00:36:37] 2026-03-03 23:35:30,021 | INFO     | job 7036056757 has finished - writing final server update
[2026-03-04 00:36:37] 2026-03-03 23:35:30,022 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_59524/.job.ad'
[2026-03-04 00:36:37] 2026-03-03 23:35:30,022 | INFO     | total number of processed events: 400 (read)
[2026-03-04 00:36:37] 2026-03-03 23:35:30,040 | INFO     | using path: /var/lib/boinc/var/slot92/slots/0/PanDA_Pilot-7036056757/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 00:36:37] 2026-03-03 23:35:30,040 | INFO     | extracted standard info from prmon json
[2026-03-04 00:36:37] 2026-03-03 23:35:30,041 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 00:36:37] 2026-03-03 23:35:30,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 00:36:37] 2026-03-03 23:35:30,041 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 00:36:37] 2026-03-03 23:35:30,041 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 00:36:37] 2026-03-03 23:35:30,042 | INFO     | fitting pss+swap vs Time
[2026-03-04 00:36:37] 2026-03-03 23:35:30,042 | INFO     | sum of square deviations: 233641590.0
[2026-03-04 00:36:37] 2026-03-03 23:35:30,043 | INFO     | sum of deviations: 528034482.99999994
[2026-03-04 00:36:37] 2026-03-03 23:35:30,043 | INFO     | mean x: 1772578052.0
[2026-03-04 00:36:37] 2026-03-03 23:35:30,043 | INFO     | mean y: 2347452.3076923075
[2026-03-04 00:36:37] 2026-03-03 23:35:30,043 | INFO     | intersect: -4003713006.6412773
[2026-03-04 00:36:37] 2026-03-03 23:35:30,043 | INFO     | chi2: 0.0003771511883919974
[2026-03-04 00:36:37] 2026-03-03 23:35:30,043 | INFO     | current memory leak: 2.26 B/s (using 91 data points, chi2=0.00)
[2026-03-04 00:36:37] 2026-03-03 23:35:30,043 | INFO     | could have reported an average CPU frequency of 3579 MHz (7 samples)
[2026-03-04 00:36:37] 2026-03-03 23:35:30,043 | INFO     | ..............................
[2026-03-04 00:36:37] 2026-03-03 23:35:30,043 | INFO     | . Timing measurements:
[2026-03-04 00:36:37] 2026-03-03 23:35:30,043 | INFO     | . get job = 0 s
[2026-03-04 00:36:37] 2026-03-03 23:35:30,043 | INFO     | . initial setup = 5 s
[2026-03-04 00:36:37] 2026-03-03 23:35:30,043 | INFO     | . payload setup = 4 s
[2026-03-04 00:36:37] 2026-03-03 23:35:30,043 | INFO     | . stage-in = 0 s
[2026-03-04 00:36:37] 2026-03-03 23:35:30,043 | INFO     | . payload execution = 5924 s
[2026-03-04 00:36:37] 2026-03-03 23:35:30,043 | INFO     | . stage-out = 0 s
[2026-03-04 00:36:37] 2026-03-03 23:35:30,044 | INFO     | . log creation = 0 s
[2026-03-04 00:36:37] 2026-03-03 23:35:30,044 | INFO     | ..............................
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | 
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | job summary report
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | --------------------------------------------------
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | PanDA job id: 7036056757
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | task id: 48838586
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | errors: (none)
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | pilot state: finished 
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | transexitcode: 0
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | exeerrorcode: 0
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | exeerrordiag: 
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | exitcode: 0
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | exitmsg: OK
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | cpuconsumptiontime: 22730 s
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | nevents: 400
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | neventsw: 0
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | pid: 698891
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | pgrp: 698891
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | corecount: 4
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | event service: False
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | sizes: {0: 2286599, 1: 2287060, 11: 2287060, 5933: 2313895, 5934: 2322915, 5937: 2322971, 5938: 2323293}
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | --------------------------------------------------
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | 
[2026-03-04 00:36:37] 2026-03-03 23:35:30,096 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot92/slots/0
[2026-03-04 00:36:37] 2026-03-03 23:35:30,115 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,115 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,115 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,115 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | job 7036056757 has completed (purged errors)
[2026-03-04 00:36:37] 2026-03-03 23:35:30,116 | INFO     | overall cleanup function is called
[2026-03-04 00:36:37] 2026-03-03 23:35:31,122 | INFO     | --- collectZombieJob: --- 10, [698891]
[2026-03-04 00:36:37] 2026-03-03 23:35:31,123 | INFO     | zombie collector waiting for pid 698891
[2026-03-04 00:36:37] 2026-03-03 23:35:31,123 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 00:36:37] 2026-03-03 23:35:31,123 | INFO     | collected zombie processes
[2026-03-04 00:36:37] 2026-03-03 23:35:31,123 | INFO     | will attempt to kill all subprocesses of pid=698891
[2026-03-04 00:36:37] 2026-03-03 23:35:31,599 | INFO     | process IDs to be killed: [698891] (in reverse order)
[2026-03-04 00:36:37] 2026-03-03 23:35:31,843 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 00:36:37] 2026-03-03 23:35:31,844 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 00:36:37] 2026-03-03 23:35:31,874 | INFO     | did not find any defunct processes belonging to 698891
[2026-03-04 00:36:37] 2026-03-03 23:35:31,904 | INFO     | did not find any defunct processes belonging to 698891
[2026-03-04 00:36:37] 2026-03-03 23:35:31,904 | INFO     | ready for new job
[2026-03-04 00:36:37] 2026-03-03 23:35:31,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 00:36:37] 2026-03-03 23:35:31,905 | INFO     | **************************************
[2026-03-04 00:36:37] 2026-03-03 23:35:31,906 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 00:36:37] 2026-03-03 23:35:31,906 | INFO     | **************************************
[2026-03-04 00:36:37] 2026-03-03 23:35:31,906 | INFO     | 
[2026-03-04 00:36:37] 2026-03-03 23:35:31,912 | INFO     | architecture information:
[2026-03-04 00:36:37] 2026-03-03 23:35:31,912 | INFO     | executing command: cat /etc/os-release
[2026-03-04 00:36:37] 2026-03-03 23:35:31,931 | INFO     | cat /etc/os-release:
[2026-03-04 00:36:37] NAME="CentOS Linux"
[2026-03-04 00:36:37] VERSION="7 (Core)"
[2026-03-04 00:36:37] ID="centos"
[2026-03-04 00:36:37] ID_LIKE="rhel fedora"
[2026-03-04 00:36:37] VERSION_ID="7"
[2026-03-04 00:36:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 00:36:37] ANSI_COLOR="0;31"
[2026-03-04 00:36:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 00:36:37] HOME_URL="https://www.centos.org/"
[2026-03-04 00:36:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 00:36:37] 
[2026-03-04 00:36:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 00:36:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 00:36:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 00:36:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 00:36:37] 
[2026-03-04 00:36:37] 2026-03-03 23:35:31,931 | INFO     | **************************************
[2026-03-04 00:36:37] 2026-03-03 23:35:32,434 | INFO     | executing command: df -mP /var/lib/boinc/var/slot92/slots/0
[2026-03-04 00:36:37] 2026-03-03 23:35:32,447 | INFO     | sufficient remaining disk space (21851275264 B)
[2026-03-04 00:36:37] 2026-03-03 23:35:32,448 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 00:36:37] 2026-03-03 23:35:32,448 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 00:36:37] 2026-03-03 23:35:32,448 | INFO     | update_server=False
[2026-03-04 00:36:37] 2026-03-03 23:35:32,448 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 00:36:37] 2026-03-03 23:35:32,448 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 00:36:37] 2026-03-03 23:35:32,469 | INFO     | all payload control threads have been joined
[2026-03-04 00:36:37] 2026-03-03 23:35:32,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 00:36:37] 2026-03-03 23:35:32,986 | INFO     | aborting loop
[2026-03-04 00:36:37] 2026-03-03 23:35:33,311 | INFO     | all data control threads have been joined
[2026-03-04 00:36:37] 2026-03-03 23:35:33,326 | INFO     | all job control threads have been joined
[2026-03-04 00:36:37] 2026-03-03 23:35:33,453 | INFO     | [job] retrieve thread has finished
[2026-03-04 00:36:37] 2026-03-03 23:35:33,475 | INFO     | [payload] control thread has finished
[2026-03-04 00:36:37] 2026-03-03 23:35:33,900 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 00:36:37] 2026-03-03 23:35:33,935 | INFO     | [job] validate thread has finished
[2026-03-04 00:36:37] 2026-03-03 23:35:33,991 | INFO     | [job] job monitor thread has finished
[2026-03-04 00:36:37] 2026-03-03 23:35:34,000 | INFO     | [payload] validate_post thread has finished
[2026-03-04 00:36:37] 2026-03-03 23:35:34,173 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 00:36:37] 2026-03-03 23:35:34,317 | INFO     | [data] control thread has finished
[2026-03-04 00:36:37] 2026-03-03 23:35:34,332 | INFO     | [job] control thread has finished
[2026-03-04 00:36:37] 2026-03-03 23:35:34,407 | INFO     | [data] copytool_in thread has finished
[2026-03-04 00:36:37] 2026-03-03 23:35:34,452 | INFO     | [data] copytool_out thread has finished
[2026-03-04 00:36:37] 2026-03-03 23:35:34,465 | INFO     | [payload] failed_post thread has finished
[2026-03-04 00:36:37] 2026-03-03 23:35:34,943 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 00:36:37] 2026-03-03 23:35:35,105 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 00:36:37] 2026-03-03 23:35:35,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 00:36:37] 2026-03-03 23:35:36,111 | INFO     | [job] queue monitor thread has finished
[2026-03-04 00:36:37] 2026-03-03 23:35:39,626 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 00:36:37] 2026-03-03 23:35:42,850 | INFO     | job.realtimelogging is not enabled
[2026-03-04 00:36:37] 2026-03-03 23:35:43,854 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 00:36:37] 2026-03-03 23:36:03,316 | INFO     | PID=685949 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-04 00:36:37] 2026-03-03 23:36:03,316 | INFO     | .. there are 52 such processes running
[2026-03-04 00:36:37] 2026-03-03 23:36:03,316 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 00:36:37] 2026-03-03 23:36:03,317 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 00:36:37] 2026-03-03 23:36:03,317 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 00:36:37] 2026-03-03 23:36:31,024 | INFO     | [monitor] cgroup control has ended
[2026-03-04 00:36:37] 2026-03-03 23:36:31,732 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22934900193088)>', '<ExcThread(monitor, started 22934588487424)>']
[2026-03-04 00:36:37] 2026-03-03 23:36:32,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 00:36:37] 2026-03-03 23:36:32,462 | INFO     | [monitor] control thread has ended
[2026-03-04 00:36:37] 2026-03-03 23:36:36,756 | INFO     | all workflow threads have been joined
[2026-03-04 00:36:37] 2026-03-03 23:36:36,757 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 00:36:37] 2026-03-03 23:36:36,757 | INFO     | traces error code: 0
[2026-03-04 00:36:37] 2026-03-03 23:36:36,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 00:36:37] 2026-03-03 23:36:36,929 [wrapper] ==== pilot stdout END ====
[2026-03-04 00:36:37] 2026-03-03 23:36:36,931 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 00:36:37] 2026-03-03 23:36:36,934 [wrapper] pilotpid: 685949
[2026-03-04 00:36:37] 2026-03-03 23:36:36,936 [wrapper] Pilot exit status: 0
[2026-03-04 00:36:37] 2026-03-03 23:36:36,946 [wrapper] pandaids: 7036056757
[2026-03-04 00:36:37] 2026-03-03 23:36:37,076 [wrapper] cleanup supervisor_pilot 1462854 685950
[2026-03-04 00:36:37] 2026-03-03 23:36:37,078 [wrapper] Test setup, not cleaning
[2026-03-04 00:36:37] 2026-03-03 23:36:37,081 [wrapper] apfmon messages muted
[2026-03-04 00:36:37] 2026-03-03 23:36:37,084 [wrapper] ==== wrapper stdout END ====
[2026-03-04 00:36:37] 2026-03-03 23:36:37,090 [wrapper] ==== wrapper stderr END ====
[2026-03-04 00:36:37]  *** Error codes and diagnostics ***
[2026-03-04 00:36:37]     "exeErrorCode": 0,
[2026-03-04 00:36:37]     "exeErrorDiag": "",
[2026-03-04 00:36:37]     "pilotErrorCode": 0,
[2026-03-04 00:36:37]     "pilotErrorDiag": "",
[2026-03-04 00:36:37]  *** Listing of results directory ***
[2026-03-04 00:36:37] total 490244
[2026-03-04 00:36:37] -rw-r--r--. 1 boinc boinc    584627 Mar  2 18:50 pilot3.tar.gz
[2026-03-04 00:36:37] -rwx------. 1 boinc boinc     36322 Mar  2 19:04 runpilot2-wrapper.sh
[2026-03-04 00:36:37] -rw-r--r--. 1 boinc boinc      5111 Mar  2 19:05 queuedata.json
[2026-03-04 00:36:37] -rw-r--r--. 1 boinc boinc       100 Mar  3 22:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 00:36:37] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 22:56 run_atlas
[2026-03-04 00:36:37] -rw-r--r--. 1 boinc boinc       105 Mar  3 22:56 job.xml
[2026-03-04 00:36:37] -rw-r--r--. 1 boinc boinc      6705 Mar  3 22:56 init_data.xml
[2026-03-04 00:36:37] -rw-r--r--. 2 boinc boinc 281294195 Mar  3 22:56 EVNT.48220221._000078.pool.root.1
[2026-03-04 00:36:37] -rw-r--r--. 2 boinc boinc     15845 Mar  3 22:56 start_atlas.sh
[2026-03-04 00:36:37] drwxrwx--x. 2 boinc boinc      4096 Mar  3 22:56 shared
[2026-03-04 00:36:37] -rw-r--r--. 2 boinc boinc    597958 Mar  3 22:56 input.tar.gz
[2026-03-04 00:36:37] -rw-r--r--. 1 boinc boinc         0 Mar  3 22:56 boinc_lockfile
[2026-03-04 00:36:37] -rw-r--r--. 1 boinc boinc      2561 Mar  3 22:56 pandaJob.out
[2026-03-04 00:36:37] -rw-------. 1 boinc boinc    998484 Mar  3 22:56 agis_schedconf.cvmfs.json
[2026-03-04 00:36:37] -rw-------. 1 boinc boinc   1516092 Mar  3 22:56 agis_ddmendpoints.agis.ALL.json
[2026-03-04 00:36:37] -rw-------. 1 boinc boinc       444 Mar  3 22:56 workernode_map.json
[2026-03-04 00:36:37] drwx------. 5 boinc boinc      4096 Mar  3 22:56 pilot3
[2026-03-04 00:36:37] -rw-------. 1 boinc boinc 214475764 Mar  4 00:34 HITS.48838586._002015.pool.root.1
[2026-03-04 00:36:37] -rw-r--r--. 1 boinc boinc       529 Mar  4 00:35 boinc_task_state.xml
[2026-03-04 00:36:37] -rw-------. 1 boinc boinc      1032 Mar  4 00:35 memory_monitor_summary.json
[2026-03-04 00:36:37] -rw-------. 1 boinc boinc    297431 Mar  4 00:35 log.48838586._002015.job.log.tgz.1
[2026-03-04 00:36:37] -rw-------. 1 boinc boinc      6349 Mar  4 00:35 heartbeat.json
[2026-03-04 00:36:37] -rw-------. 1 boinc boinc        95 Mar  4 00:36 pilot_heartbeat.json
[2026-03-04 00:36:37] -rw-r--r--. 1 boinc boinc        27 Mar  4 00:36 wrapper_checkpoint.txt
[2026-03-04 00:36:37] -rw-r--r--. 1 boinc boinc      8192 Mar  4 00:36 boinc_mmap_file
[2026-03-04 00:36:37] -rw-------. 1 boinc boinc      4900 Mar  4 00:36 pilotlog.txt
[2026-03-04 00:36:37] -rw-------. 1 boinc boinc    856139 Mar  4 00:36 log.48838586._002015.job.log.1
[2026-03-04 00:36:37] -rw-------. 1 boinc boinc       357 Mar  4 00:36 output.list
[2026-03-04 00:36:37] -rw-r--r--. 1 boinc boinc       620 Mar  4 00:36 runtime_log
[2026-03-04 00:36:37] -rw-------. 1 boinc boinc   1167360 Mar  4 00:36 result.tar.gz
[2026-03-04 00:36:37] -rw-r--r--. 1 boinc boinc      9204 Mar  4 00:36 runtime_log.err
[2026-03-04 00:36:37] -rw-------. 1 boinc boinc       663 Mar  4 00:36 2CYKDmKoMH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmWNELDmGQzmRo.diag
[2026-03-04 00:36:37] -rw-r--r--. 1 boinc boinc     21542 Mar  4 00:36 stderr.txt
[2026-03-04 00:36:37] HITS file was successfully produced:
[2026-03-04 00:36:37] -rw-------. 1 boinc boinc 214475764 Mar  4 00:34 shared/HITS.pool.root.1
[2026-03-04 00:36:37]  *** Contents of shared directory: ***
[2026-03-04 00:36:37] total 485904
[2026-03-04 00:36:37] -rw-r--r--. 2 boinc boinc 281294195 Mar  3 22:56 ATLAS.root_0
[2026-03-04 00:36:37] -rw-r--r--. 2 boinc boinc     15845 Mar  3 22:56 start_atlas.sh
[2026-03-04 00:36:37] -rw-r--r--. 2 boinc boinc    597958 Mar  3 22:56 input.tar.gz
[2026-03-04 00:36:37] -rw-------. 1 boinc boinc 214475764 Mar  4 00:34 HITS.pool.root.1
[2026-03-04 00:36:37] -rw-------. 1 boinc boinc   1167360 Mar  4 00:36 result.tar.gz
00:36:38 (681354): run_atlas exited; CPU time 23001.471006
00:36:38 (681354): called boinc_finish(0)

</stderr_txt>
]]>


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