Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:09:31 (2171476): wrapper (7.7.26015): starting
19:09:31 (2171476): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 19:09:31] Arguments: --nthreads 4
[2026-03-04 19:09:31] Threads: 4
[2026-03-04 19:09:31] Checking for CVMFS
[2026-03-04 19:09:32] No cvmfs_config command found, will try listing directly
[2026-03-04 19:09:32] CVMFS is ok
[2026-03-04 19:09:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 19:09:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 19:09:32] Further information can be found at the LHC@home message board.
[2026-03-04 19:09:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 19:09:32] Checking for apptainer binary...
[2026-03-04 19:09:32] which: no apptainer in ((null))
[2026-03-04 19:09:32] apptainer is not installed, using version from CVMFS
[2026-03-04 19:09:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 19:09:32] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-04 19:09:32] apptainer works
[2026-03-04 19:09:32] Set ATHENA_PROC_NUMBER=4
[2026-03-04 19:09:32] Set ATHENA_CORE_NUMBER=4
[2026-03-04 19:09:32] Starting ATLAS job with PandaID=7036056394
[2026-03-04 19:09:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 20:19:34]  *** The last 200 lines of the pilot log: ***
[2026-03-04 20:19:34]  status=None
[2026-03-04 20:19:34]  status_code=0
[2026-03-04 20:19:34]  storage_token=
[2026-03-04 20:19:34]  surl=/var/lib/boinc/var/slot60/slots/2/PanDA_Pilot-7036056394/log.48700890._001673.job.log.tgz.1
[2026-03-04 20:19:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/bf/log.48700890._001673.job.log.tgz.1
[2026-03-04 20:19:34]  workdir=None
[2026-03-04 20:19:34] ]
[2026-03-04 20:19:34] 2026-03-04 19:18:22,403 | INFO     | transferring file log.48700890._001673.job.log.tgz.1 from /var/lib/boinc/var/slot60/slots/2/PanDA_Pilot-7036056394/log.48700890._001673.job.log.tgz.1 to /var/lib/b
[2026-03-04 20:19:34] 2026-03-04 19:18:22,403 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot60/slots/2/PanDA_Pilot-7036056394/log.48700890._001673.job.log.tgz.1 /var/lib/boinc/var/slot60/slots/2/lo
[2026-03-04 20:19:34] 2026-03-04 19:18:22,423 | INFO     | adding to output.list: log.48700890._001673.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/bf/log.48700890._001673.job.log.tg
[2026-03-04 20:19:34] 2026-03-04 19:18:22,423 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-04 20:19:34] 2026-03-04 19:18:22,423 | INFO     | summary of transferred files:
[2026-03-04 20:19:34] 2026-03-04 19:18:22,423 | INFO     |  -- lfn=log.48700890._001673.job.log.tgz.1, status_code=0, status=transferred
[2026-03-04 20:19:34] 2026-03-04 19:18:22,423 | INFO     | stage-out finished correctly
[2026-03-04 20:19:34] 2026-03-04 19:18:23,440 | INFO     | monitor loop #293: job 0:7036056394 is in state 'finished'
[2026-03-04 20:19:34] 2026-03-04 19:18:23,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-04 20:19:34] 2026-03-04 19:18:23,576 | INFO     | time since job start (4082s) is within the limit (349056.0s)
[2026-03-04 20:19:34] 2026-03-04 19:18:25,132 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-04 20:19:34] 2026-03-04 19:18:25,581 | INFO     | time since job start (4084s) is within the limit (349056.0s)
[2026-03-04 20:19:34] 2026-03-04 19:18:25,943 | INFO     | monitor loop #294: job 0:7036056394 is in state 'finished'
[2026-03-04 20:19:34] 2026-03-04 19:18:25,943 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-04 20:19:34] 2026-03-04 19:18:27,110 | INFO     | PID=2176598 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-04 20:19:34] 2026-03-04 19:18:27,110 | INFO     | .. there are 56 such processes running
[2026-03-04 20:19:34] 2026-03-04 19:18:27,889 | INFO     | job 7036056394 has state=finished
[2026-03-04 20:19:34] 2026-03-04 19:18:27,890 | INFO     | preparing for final server update for job 7036056394 in state='finished'
[2026-03-04 20:19:34] 2026-03-04 19:18:28,110 | INFO     | time since job start (4087s) is within the limit (349056.0s)
[2026-03-04 20:19:34] 2026-03-04 19:18:28,446 | INFO     | monitor loop #295: job 0:7036056394 is in state 'finished'
[2026-03-04 20:19:34] 2026-03-04 19:18:28,446 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-04 20:19:34] 2026-03-04 19:18:28,469 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-04 20:19:34] 2026-03-04 19:18:28,469 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/2/PanDA_Pilot-7036056394/jobReport.json
[2026-03-04 20:19:34] 2026-03-04 19:18:28,471 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/2/workernode_map.json
[2026-03-04 20:19:34] 2026-03-04 19:18:28,471 | INFO     | this job has now completed (state=finished)
[2026-03-04 20:19:34] 2026-03-04 19:18:28,471 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 20:19:34] 2026-03-04 19:18:28,471 | INFO     | log transfer has been attempted: DONE
[2026-03-04 20:19:34] 2026-03-04 19:18:28,471 | INFO     | job 7036056394 has finished - writing final server update
[2026-03-04 20:19:34] 2026-03-04 19:18:28,471 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_292338/.job.ad'
[2026-03-04 20:19:34] 2026-03-04 19:18:28,471 | INFO     | total number of processed events: 400 (read)
[2026-03-04 20:19:34] 2026-03-04 19:18:28,489 | INFO     | using path: /var/lib/boinc/var/slot60/slots/2/PanDA_Pilot-7036056394/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 20:19:34] 2026-03-04 19:18:28,490 | INFO     | extracted standard info from prmon json
[2026-03-04 20:19:34] 2026-03-04 19:18:28,490 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 20:19:34] 2026-03-04 19:18:28,490 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 20:19:34] 2026-03-04 19:18:28,490 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 20:19:34] 2026-03-04 19:18:28,490 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 20:19:34] 2026-03-04 19:18:28,491 | INFO     | fitting pss+swap vs Time
[2026-03-04 20:19:34] 2026-03-04 19:18:28,491 | INFO     | sum of square deviations: 66959395.0
[2026-03-04 20:19:34] 2026-03-04 19:18:28,492 | INFO     | sum of deviations: 624834529.0
[2026-03-04 20:19:34] 2026-03-04 19:18:28,492 | INFO     | mean x: 1772649976.5
[2026-03-04 20:19:34] 2026-03-04 19:18:28,492 | INFO     | mean y: 2311581.7
[2026-03-04 20:19:34] 2026-03-04 19:18:28,492 | INFO     | intersect: -16539249362.036701
[2026-03-04 20:19:34] 2026-03-04 19:18:28,492 | INFO     | chi2: 0.0002222246718151927
[2026-03-04 20:19:34] 2026-03-04 19:18:28,492 | INFO     | current memory leak: 9.33 B/s (using 60 data points, chi2=0.00)
[2026-03-04 20:19:34] 2026-03-04 19:18:28,492 | INFO     | could have reported an average CPU frequency of 3566 MHz (6 samples)
[2026-03-04 20:19:34] 2026-03-04 19:18:28,492 | INFO     | ..............................
[2026-03-04 20:19:34] 2026-03-04 19:18:28,492 | INFO     | . Timing measurements:
[2026-03-04 20:19:34] 2026-03-04 19:18:28,492 | INFO     | . get job = 0 s
[2026-03-04 20:19:34] 2026-03-04 19:18:28,492 | INFO     | . initial setup = 17 s
[2026-03-04 20:19:34] 2026-03-04 19:18:28,492 | INFO     | . payload setup = 21 s
[2026-03-04 20:19:34] 2026-03-04 19:18:28,492 | INFO     | . stage-in = 0 s
[2026-03-04 20:19:34] 2026-03-04 19:18:28,492 | INFO     | . payload execution = 4043 s
[2026-03-04 20:19:34] 2026-03-04 19:18:28,492 | INFO     | . stage-out = 0 s
[2026-03-04 20:19:34] 2026-03-04 19:18:28,492 | INFO     | . log creation = 0 s
[2026-03-04 20:19:34] 2026-03-04 19:18:28,492 | INFO     | ..............................
[2026-03-04 20:19:34] 2026-03-04 19:18:28,615 | INFO     | 
[2026-03-04 20:19:34] 2026-03-04 19:18:28,615 | INFO     | job summary report
[2026-03-04 20:19:34] 2026-03-04 19:18:28,615 | INFO     | --------------------------------------------------
[2026-03-04 20:19:34] 2026-03-04 19:18:28,615 | INFO     | PanDA job id: 7036056394
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | task id: 48700890
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | errors: (none)
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | pilot state: finished 
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | transexitcode: 0
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | exeerrorcode: 0
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | exeerrordiag: 
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | exitcode: 0
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | exitmsg: OK
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | cpuconsumptiontime: 14802 s
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | nevents: 400
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | neventsw: 0
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | pid: 2182679
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | pgrp: 2182679
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | corecount: 4
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | event service: False
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | sizes: {0: 2295701, 11: 2295701, 4069: 2330900, 4072: 2330900, 4075: 2331094}
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | --------------------------------------------------
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | 
[2026-03-04 20:19:34] 2026-03-04 19:18:28,619 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/2
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,636 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 20:19:34] 2026-03-04 19:18:28,637 | INFO     | job 7036056394 has completed (purged errors)
[2026-03-04 20:19:34] 2026-03-04 19:18:28,637 | INFO     | overall cleanup function is called
[2026-03-04 20:19:34] 2026-03-04 19:18:29,643 | INFO     | --- collectZombieJob: --- 10, [2182679]
[2026-03-04 20:19:34] 2026-03-04 19:18:29,643 | INFO     | zombie collector waiting for pid 2182679
[2026-03-04 20:19:34] 2026-03-04 19:18:29,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 20:19:34] 2026-03-04 19:18:29,643 | INFO     | collected zombie processes
[2026-03-04 20:19:34] 2026-03-04 19:18:29,643 | INFO     | will attempt to kill all subprocesses of pid=2182679
[2026-03-04 20:19:34] 2026-03-04 19:18:30,116 | INFO     | process IDs to be killed: [2182679] (in reverse order)
[2026-03-04 20:19:34] 2026-03-04 19:18:30,339 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 20:19:34] 2026-03-04 19:18:30,339 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 20:19:34] 2026-03-04 19:18:30,366 | INFO     | did not find any defunct processes belonging to 2182679
[2026-03-04 20:19:34] 2026-03-04 19:18:30,393 | INFO     | did not find any defunct processes belonging to 2182679
[2026-03-04 20:19:34] 2026-03-04 19:18:30,393 | INFO     | ready for new job
[2026-03-04 20:19:34] 2026-03-04 19:18:30,393 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 20:19:34] 2026-03-04 19:18:30,394 | INFO     | **************************************
[2026-03-04 20:19:34] 2026-03-04 19:18:30,394 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 20:19:34] 2026-03-04 19:18:30,394 | INFO     | **************************************
[2026-03-04 20:19:34] 2026-03-04 19:18:30,394 | INFO     | 
[2026-03-04 20:19:34] 2026-03-04 19:18:30,401 | INFO     | architecture information:
[2026-03-04 20:19:34] 2026-03-04 19:18:30,401 | INFO     | executing command: cat /etc/os-release
[2026-03-04 20:19:34] 2026-03-04 19:18:30,421 | INFO     | cat /etc/os-release:
[2026-03-04 20:19:34] NAME="CentOS Linux"
[2026-03-04 20:19:34] VERSION="7 (Core)"
[2026-03-04 20:19:34] ID="centos"
[2026-03-04 20:19:34] ID_LIKE="rhel fedora"
[2026-03-04 20:19:34] VERSION_ID="7"
[2026-03-04 20:19:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 20:19:34] ANSI_COLOR="0;31"
[2026-03-04 20:19:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 20:19:34] HOME_URL="https://www.centos.org/"
[2026-03-04 20:19:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 20:19:34] 
[2026-03-04 20:19:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 20:19:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 20:19:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 20:19:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 20:19:34] 
[2026-03-04 20:19:34] 2026-03-04 19:18:30,421 | INFO     | **************************************
[2026-03-04 20:19:34] 2026-03-04 19:18:30,924 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/2
[2026-03-04 20:19:34] 2026-03-04 19:18:30,943 | INFO     | sufficient remaining disk space (20450377728 B)
[2026-03-04 20:19:34] 2026-03-04 19:18:30,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 20:19:34] 2026-03-04 19:18:30,943 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 20:19:34] 2026-03-04 19:18:30,943 | INFO     | update_server=False
[2026-03-04 20:19:34] 2026-03-04 19:18:30,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 20:19:34] 2026-03-04 19:18:30,944 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 20:19:34] 2026-03-04 19:18:30,949 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-04 20:19:34] 2026-03-04 19:18:30,949 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-04 20:19:34] 2026-03-04 19:18:30,949 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 20:19:34] 2026-03-04 19:18:30,949 | INFO     | will abort loop
[2026-03-04 20:19:34] 2026-03-04 19:18:31,185 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 20:19:34] 2026-03-04 19:18:31,534 | INFO     | all data control threads have been joined
[2026-03-04 20:19:34] 2026-03-04 19:18:31,689 | INFO     | all job control threads have been joined
[2026-03-04 20:19:34] 2026-03-04 19:18:31,948 | INFO     | [job] retrieve thread has finished
[2026-03-04 20:19:34] 2026-03-04 19:18:31,954 | INFO     | [job] job monitor thread has finished
[2026-03-04 20:19:34] 2026-03-04 19:18:32,388 | INFO     | all payload control threads have been joined
[2026-03-04 20:19:34] 2026-03-04 19:18:32,428 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 20:19:34] 2026-03-04 19:18:32,539 | INFO     | [data] control thread has finished
[2026-03-04 20:19:34] 2026-03-04 19:18:32,577 | INFO     | [payload] validate_post thread has finished
[2026-03-04 20:19:34] 2026-03-04 19:18:32,697 | INFO     | [job] control thread has finished
[2026-03-04 20:19:34] 2026-03-04 19:18:32,750 | INFO     | [job] validate thread has finished
[2026-03-04 20:19:34] 2026-03-04 19:18:32,833 | INFO     | [data] copytool_in thread has finished
[2026-03-04 20:19:34] 2026-03-04 19:18:32,949 | INFO     | [data] copytool_out thread has finished
[2026-03-04 20:19:34] 2026-03-04 19:18:32,996 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 20:19:34] 2026-03-04 19:18:33,359 | INFO     | [payload] failed_post thread has finished
[2026-03-04 20:19:34] 2026-03-04 19:18:33,393 | INFO     | [payload] control thread has finished
[2026-03-04 20:19:34] 2026-03-04 19:18:33,420 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 20:19:34] 2026-03-04 19:18:33,553 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 20:19:34] 2026-03-04 19:18:34,558 | INFO     | [job] queue monitor thread has finished
[2026-03-04 20:19:34] 2026-03-04 19:18:35,190 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 20:19:34] 2026-03-04 19:18:41,339 | INFO     | job.realtimelogging is not enabled
[2026-03-04 20:19:34] 2026-03-04 19:18:42,344 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 20:19:34] 2026-03-04 19:19:01,750 | INFO     | PID=2176598 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 20:19:34] 2026-03-04 19:19:01,750 | INFO     | .. there are 56 such processes running
[2026-03-04 20:19:34] 2026-03-04 19:19:01,750 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 20:19:34] 2026-03-04 19:19:01,750 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 20:19:34] 2026-03-04 19:19:01,750 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 20:19:34] 2026-03-04 19:19:28,162 | INFO     | [monitor] cgroup control has ended
[2026-03-04 20:19:34] 2026-03-04 19:19:29,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22920070285120)>', '<ExcThread(monitor, started 22919834257152)>']
[2026-03-04 20:19:34] 2026-03-04 19:19:29,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 20:19:34] 2026-03-04 19:19:29,892 | INFO     | [monitor] control thread has ended
[2026-03-04 20:19:34] 2026-03-04 19:19:34,138 | INFO     | all workflow threads have been joined
[2026-03-04 20:19:34] 2026-03-04 19:19:34,138 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 20:19:34] 2026-03-04 19:19:34,139 | INFO     | traces error code: 0
[2026-03-04 20:19:34] 2026-03-04 19:19:34,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 20:19:34] 2026-03-04 19:19:34,334 [wrapper] ==== pilot stdout END ====
[2026-03-04 20:19:34] 2026-03-04 19:19:34,336 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 20:19:34] 2026-03-04 19:19:34,338 [wrapper] pilotpid: 2176598
[2026-03-04 20:19:34] 2026-03-04 19:19:34,340 [wrapper] Pilot exit status: 0
[2026-03-04 20:19:34] 2026-03-04 19:19:34,375 [wrapper] pandaids: 7036056394
[2026-03-04 20:19:34] 2026-03-04 19:19:34,491 [wrapper] cleanup supervisor_pilot 2738752 2176599
[2026-03-04 20:19:34] 2026-03-04 19:19:34,494 [wrapper] Test setup, not cleaning
[2026-03-04 20:19:34] 2026-03-04 19:19:34,496 [wrapper] apfmon messages muted
[2026-03-04 20:19:34] 2026-03-04 19:19:34,499 [wrapper] ==== wrapper stdout END ====
[2026-03-04 20:19:34] 2026-03-04 19:19:34,507 [wrapper] ==== wrapper stderr END ====
[2026-03-04 20:19:34]  *** Error codes and diagnostics ***
[2026-03-04 20:19:34]     "exeErrorCode": 0,
[2026-03-04 20:19:34]     "exeErrorDiag": "",
[2026-03-04 20:19:34]     "pilotErrorCode": 0,
[2026-03-04 20:19:34]     "pilotErrorDiag": "",
[2026-03-04 20:19:34]  *** Listing of results directory ***
[2026-03-04 20:19:34] total 331964
[2026-03-04 20:19:34] -rw-r--r--. 1 boinc boinc    584627 Mar  2 18:50 pilot3.tar.gz
[2026-03-04 20:19:34] -rw-r--r--. 1 boinc boinc      5111 Mar  2 19:01 queuedata.json
[2026-03-04 20:19:34] -rwx------. 1 boinc boinc     36322 Mar  2 19:02 runpilot2-wrapper.sh
[2026-03-04 20:19:34] -rw-r--r--. 1 boinc boinc       100 Mar  4 19:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 20:19:34] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 19:09 run_atlas
[2026-03-04 20:19:34] -rw-r--r--. 1 boinc boinc       105 Mar  4 19:09 job.xml
[2026-03-04 20:19:34] -rw-r--r--. 1 boinc boinc      6702 Mar  4 19:09 init_data.xml
[2026-03-04 20:19:34] -rw-r--r--. 2 boinc boinc 192719619 Mar  4 19:09 EVNT.48700888._000069.pool.root.1
[2026-03-04 20:19:34] -rw-r--r--. 2 boinc boinc     15845 Mar  4 19:09 start_atlas.sh
[2026-03-04 20:19:34] drwxrwx--x. 2 boinc boinc      4096 Mar  4 19:09 shared
[2026-03-04 20:19:34] -rw-r--r--. 2 boinc boinc    597931 Mar  4 19:09 input.tar.gz
[2026-03-04 20:19:34] -rw-r--r--. 1 boinc boinc         0 Mar  4 19:09 boinc_lockfile
[2026-03-04 20:19:34] -rw-r--r--. 1 boinc boinc      2511 Mar  4 19:09 pandaJob.out
[2026-03-04 20:19:34] -rw-------. 1 boinc boinc    997757 Mar  4 19:10 agis_schedconf.cvmfs.json
[2026-03-04 20:19:34] -rw-------. 1 boinc boinc   1521291 Mar  4 19:10 agis_ddmendpoints.agis.ALL.json
[2026-03-04 20:19:34] -rw-------. 1 boinc boinc       444 Mar  4 19:10 workernode_map.json
[2026-03-04 20:19:34] drwx------. 5 boinc boinc      4096 Mar  4 19:10 pilot3
[2026-03-04 20:19:34] -rw-------. 1 boinc boinc 141522534 Mar  4 20:18 HITS.48700890._001673.pool.root.1
[2026-03-04 20:19:34] -rw-r--r--. 1 boinc boinc       530 Mar  4 20:18 boinc_task_state.xml
[2026-03-04 20:19:34] -rw-------. 1 boinc boinc        95 Mar  4 20:18 pilot_heartbeat.json
[2026-03-04 20:19:34] -rw-------. 1 boinc boinc      1029 Mar  4 20:18 memory_monitor_summary.json
[2026-03-04 20:19:34] -rw-------. 1 boinc boinc    269029 Mar  4 20:18 log.48700890._001673.job.log.tgz.1
[2026-03-04 20:19:34] -rw-------. 1 boinc boinc      6350 Mar  4 20:18 heartbeat.json
[2026-03-04 20:19:34] -rw-------. 1 boinc boinc      5087 Mar  4 20:19 pilotlog.txt
[2026-03-04 20:19:34] -rw-------. 1 boinc boinc    607691 Mar  4 20:19 log.48700890._001673.job.log.1
[2026-03-04 20:19:34] -rw-r--r--. 1 boinc boinc      8192 Mar  4 20:19 boinc_mmap_file
[2026-03-04 20:19:34] -rw-r--r--. 1 boinc boinc        27 Mar  4 20:19 wrapper_checkpoint.txt
[2026-03-04 20:19:34] -rw-------. 1 boinc boinc       357 Mar  4 20:19 output.list
[2026-03-04 20:19:34] -rw-r--r--. 1 boinc boinc       620 Mar  4 20:19 runtime_log
[2026-03-04 20:19:34] -rw-------. 1 boinc boinc    890880 Mar  4 20:19 result.tar.gz
[2026-03-04 20:19:34] -rw-r--r--. 1 boinc boinc      9204 Mar  4 20:19 runtime_log.err
[2026-03-04 20:19:34] -rw-------. 1 boinc boinc       662 Mar  4 20:19 JT9LDm6lMH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1IELDmHNkWEo.diag
[2026-03-04 20:19:34] -rw-r--r--. 1 boinc boinc     21927 Mar  4 20:19 stderr.txt
[2026-03-04 20:19:34] HITS file was successfully produced:
[2026-03-04 20:19:34] -rw-------. 1 boinc boinc 141522534 Mar  4 20:18 shared/HITS.pool.root.1
[2026-03-04 20:19:34]  *** Contents of shared directory: ***
[2026-03-04 20:19:34] total 327892
[2026-03-04 20:19:34] -rw-r--r--. 2 boinc boinc 192719619 Mar  4 19:09 ATLAS.root_0
[2026-03-04 20:19:34] -rw-r--r--. 2 boinc boinc     15845 Mar  4 19:09 start_atlas.sh
[2026-03-04 20:19:34] -rw-r--r--. 2 boinc boinc    597931 Mar  4 19:09 input.tar.gz
[2026-03-04 20:19:34] -rw-------. 1 boinc boinc 141522534 Mar  4 20:18 HITS.pool.root.1
[2026-03-04 20:19:34] -rw-------. 1 boinc boinc    890880 Mar  4 20:19 result.tar.gz
20:19:36 (2171476): run_atlas exited; CPU time 14966.796968
20:19:36 (2171476): called boinc_finish(0)

</stderr_txt>
]]>

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