Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:43:36 (604960): wrapper (7.7.26015): starting
19:43:36 (604960): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 19:43:36] Arguments: --nthreads 4
[2026-03-03 19:43:36] Threads: 4
[2026-03-03 19:43:36] Checking for CVMFS
[2026-03-03 19:43:36] No cvmfs_config command found, will try listing directly
[2026-03-03 19:43:36] CVMFS is ok
[2026-03-03 19:43:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 19:43:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 19:43:36] Further information can be found at the LHC@home message board.
[2026-03-03 19:43:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 19:43:36] Checking for apptainer binary...
[2026-03-03 19:43:36] which: no apptainer in ((null))
[2026-03-03 19:43:36] apptainer is not installed, using version from CVMFS
[2026-03-03 19:43:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 19:43:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-03-03 19:43:36] apptainer works
[2026-03-03 19:43:36] Set ATHENA_PROC_NUMBER=4
[2026-03-03 19:43:36] Set ATHENA_CORE_NUMBER=4
[2026-03-03 19:43:36] Starting ATLAS job with PandaID=7036056704
[2026-03-03 19:43:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 23:27:22]  *** The last 200 lines of the pilot log: ***
[2026-03-03 23:27:22] 2026-03-03 22:26:24,757 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 23:27:22] 2026-03-03 22:26:24,757 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 23:27:22] 2026-03-03 22:26:24,757 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 23:27:22] 2026-03-03 22:26:24,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 23:27:22] 2026-03-03 22:26:24,772 | INFO     | fitting pss+swap vs Time
[2026-03-03 23:27:22] 2026-03-03 22:26:24,773 | INFO     | sum of square deviations: 3256879670.0
[2026-03-03 23:27:22] 2026-03-03 22:26:24,774 | INFO     | sum of deviations: 6183485881.000004
[2026-03-03 23:27:22] 2026-03-03 22:26:24,774 | INFO     | mean x: 1772570108.0
[2026-03-03 23:27:22] 2026-03-03 22:26:24,775 | INFO     | mean y: 2333118.808219178
[2026-03-03 23:27:22] 2026-03-03 22:26:24,775 | INFO     | intersect: -3363054413.578156
[2026-03-03 23:27:22] 2026-03-03 22:26:24,775 | INFO     | chi2: 2.0460985181908544
[2026-03-03 23:27:22] 2026-03-03 22:26:24,775 | INFO     | sum of square deviations: 3038856977.5
[2026-03-03 23:27:22] 2026-03-03 22:26:24,777 | INFO     | sum of deviations: 18575304803.5
[2026-03-03 23:27:22] 2026-03-03 22:26:24,777 | INFO     | mean x: 1772569955.5
[2026-03-03 23:27:22] 2026-03-03 22:26:24,777 | INFO     | mean y: 2341622.453271028
[2026-03-03 23:27:22] 2026-03-03 22:26:24,777 | INFO     | intersect: -10832662279.581776
[2026-03-03 23:27:22] 2026-03-03 22:26:24,778 | INFO     | chi2: 1.3789134693381904
[2026-03-03 23:27:22] 2026-03-03 22:26:24,778 | INFO     | current chi2=1.3789134693381904 (change=32.6076698126239 %)
[2026-03-03 23:27:22] 2026-03-03 22:26:24,778 | INFO     | sum of square deviations: 2830787960.0
[2026-03-03 23:27:22] 2026-03-03 22:26:24,779 | INFO     | sum of deviations: 18074397355.999992
[2026-03-03 23:27:22] 2026-03-03 22:26:24,780 | INFO     | mean x: 1772569803.0
[2026-03-03 23:27:22] 2026-03-03 22:26:24,780 | INFO     | mean y: 2341255.2296650717
[2026-03-03 23:27:22] 2026-03-03 22:26:24,780 | INFO     | intersect: -11315401865.54743
[2026-03-03 23:27:22] 2026-03-03 22:26:24,780 | INFO     | chi2: 1.3796865808827177
[2026-03-03 23:27:22] 2026-03-03 22:26:24,780 | INFO     | current chi2=1.3796865808827177 (change=-0.05606671932056477 %)
[2026-03-03 23:27:22] 2026-03-03 22:26:24,780 | INFO     | right removable region: 208
[2026-03-03 23:27:22] 2026-03-03 22:26:24,781 | INFO     | sum of square deviations: 3038856977.5
[2026-03-03 23:27:22] 2026-03-03 22:26:24,782 | INFO     | sum of deviations: -21494342317.5
[2026-03-03 23:27:22] 2026-03-03 22:26:24,782 | INFO     | mean x: 1772570260.5
[2026-03-03 23:27:22] 2026-03-03 22:26:24,782 | INFO     | mean y: 2352243.8177570095
[2026-03-03 23:27:22] 2026-03-03 22:26:24,783 | INFO     | intersect: 12540037381.06017
[2026-03-03 23:27:22] 2026-03-03 22:26:24,783 | INFO     | chi2: 0.7392610838011394
[2026-03-03 23:27:22] 2026-03-03 22:26:24,783 | INFO     | current chi2=0.7392610838011394 (change=63.8697219499094 %)
[2026-03-03 23:27:22] 2026-03-03 22:26:24,784 | INFO     | sum of square deviations: 2830787960.0
[2026-03-03 23:27:22] 2026-03-03 22:26:24,785 | INFO     | sum of deviations: -18396069571.0
[2026-03-03 23:27:22] 2026-03-03 22:26:24,785 | INFO     | mean x: 1772570413.0
[2026-03-03 23:27:22] 2026-03-03 22:26:24,785 | INFO     | mean y: 2349956.71291866
[2026-03-03 23:27:22] 2026-03-03 22:26:24,785 | INFO     | intersect: 11521520271.766895
[2026-03-03 23:27:22] 2026-03-03 22:26:24,786 | INFO     | chi2: 0.732287552395077
[2026-03-03 23:27:22] 2026-03-03 22:26:24,786 | INFO     | current chi2=0.732287552395077 (change=0.9433110383960448 %)
[2026-03-03 23:27:22] 2026-03-03 22:26:24,786 | INFO     | left removable region: 20
[2026-03-03 23:27:22] 2026-03-03 22:26:24,786 | INFO     | sum of square deviations: 2060343747.0
[2026-03-03 23:27:22] 2026-03-03 22:26:24,787 | INFO     | sum of deviations: 2734881807.9999995
[2026-03-03 23:27:22] 2026-03-03 22:26:24,787 | INFO     | mean x: 1772570382.5
[2026-03-03 23:27:22] 2026-03-03 22:26:24,788 | INFO     | mean y: 2351706.9468085105
[2026-03-03 23:27:22] 2026-03-03 22:26:24,788 | INFO     | intersect: -2350542318.410627
[2026-03-03 23:27:22] 2026-03-03 22:26:24,788 | INFO     | chi2: 0.01215327034262869
[2026-03-03 23:27:22] 2026-03-03 22:26:24,788 | INFO     | current memory leak: 1.33 B/s (using 188 data points, chi2=0.01)
[2026-03-03 23:27:22] 2026-03-03 22:26:24,789 | INFO     | could have reported an average CPU frequency of 2575 MHz (11 samples)
[2026-03-03 23:27:22] 2026-03-03 22:26:24,789 | INFO     | ..............................
[2026-03-03 23:27:22] 2026-03-03 22:26:24,789 | INFO     | . Timing measurements:
[2026-03-03 23:27:22] 2026-03-03 22:26:24,789 | INFO     | . get job = 0 s
[2026-03-03 23:27:22] 2026-03-03 22:26:24,789 | INFO     | . initial setup = 6 s
[2026-03-03 23:27:22] 2026-03-03 22:26:24,789 | INFO     | . payload setup = 6 s
[2026-03-03 23:27:22] 2026-03-03 22:26:24,789 | INFO     | . stage-in = 0 s
[2026-03-03 23:27:22] 2026-03-03 22:26:24,789 | INFO     | . payload execution = 13324 s
[2026-03-03 23:27:22] 2026-03-03 22:26:24,789 | INFO     | . stage-out = 1 s
[2026-03-03 23:27:22] 2026-03-03 22:26:24,789 | INFO     | . log creation = 0 s
[2026-03-03 23:27:22] 2026-03-03 22:26:24,790 | INFO     | ..............................
[2026-03-03 23:27:22] 2026-03-03 22:26:24,847 | INFO     | time since job start (13349s) is within the limit (349056.0s)
[2026-03-03 23:27:22] 2026-03-03 22:26:25,213 | INFO     | 
[2026-03-03 23:27:22] 2026-03-03 22:26:25,213 | INFO     | job summary report
[2026-03-03 23:27:22] 2026-03-03 22:26:25,213 | INFO     | --------------------------------------------------
[2026-03-03 23:27:22] 2026-03-03 22:26:25,213 | INFO     | PanDA job id: 7036056704
[2026-03-03 23:27:22] 2026-03-03 22:26:25,213 | INFO     | task id: 48838586
[2026-03-03 23:27:22] 2026-03-03 22:26:25,213 | INFO     | errors: (none)
[2026-03-03 23:27:22] 2026-03-03 22:26:25,214 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 23:27:22] 2026-03-03 22:26:25,214 | INFO     | pilot state: finished 
[2026-03-03 23:27:22] 2026-03-03 22:26:25,214 | INFO     | transexitcode: 0
[2026-03-03 23:27:22] 2026-03-03 22:26:25,214 | INFO     | exeerrorcode: 0
[2026-03-03 23:27:22] 2026-03-03 22:26:25,214 | INFO     | exeerrordiag: 
[2026-03-03 23:27:22] 2026-03-03 22:26:25,214 | INFO     | exitcode: 0
[2026-03-03 23:27:22] 2026-03-03 22:26:25,214 | INFO     | exitmsg: OK
[2026-03-03 23:27:22] 2026-03-03 22:26:25,214 | INFO     | cpuconsumptiontime: 51238 s
[2026-03-03 23:27:22] 2026-03-03 22:26:25,214 | INFO     | nevents: 400
[2026-03-03 23:27:22] 2026-03-03 22:26:25,214 | INFO     | neventsw: 0
[2026-03-03 23:27:22] 2026-03-03 22:26:25,214 | INFO     | pid: 613796
[2026-03-03 23:27:22] 2026-03-03 22:26:25,214 | INFO     | pgrp: 613796
[2026-03-03 23:27:22] 2026-03-03 22:26:25,214 | INFO     | corecount: 4
[2026-03-03 23:27:22] 2026-03-03 22:26:25,215 | INFO     | event service: False
[2026-03-03 23:27:22] 2026-03-03 22:26:25,215 | INFO     | sizes: {0: 2286826, 1: 2287032, 11: 2287060, 13334: 2317137, 13336: 2326157, 13338: 2326535}
[2026-03-03 23:27:22] 2026-03-03 22:26:25,215 | INFO     | --------------------------------------------------
[2026-03-03 23:27:22] 2026-03-03 22:26:25,215 | INFO     | 
[2026-03-03 23:27:22] 2026-03-03 22:26:25,215 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2026-03-03 23:27:22] 2026-03-03 22:26:25,235 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,235 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,235 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,235 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,236 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,236 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,236 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,237 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 23:27:22] 2026-03-03 22:26:25,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,237 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 23:27:22] 2026-03-03 22:26:25,237 | INFO     | job 7036056704 has completed (purged errors)
[2026-03-03 23:27:22] 2026-03-03 22:26:25,237 | INFO     | overall cleanup function is called
[2026-03-03 23:27:22] 2026-03-03 22:26:26,245 | INFO     | --- collectZombieJob: --- 10, [613796]
[2026-03-03 23:27:22] 2026-03-03 22:26:26,245 | INFO     | zombie collector waiting for pid 613796
[2026-03-03 23:27:22] 2026-03-03 22:26:26,246 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 23:27:22] 2026-03-03 22:26:26,246 | INFO     | collected zombie processes
[2026-03-03 23:27:22] 2026-03-03 22:26:26,246 | INFO     | will attempt to kill all subprocesses of pid=613796
[2026-03-03 23:27:22] 2026-03-03 22:26:26,781 | INFO     | process IDs to be killed: [613796] (in reverse order)
[2026-03-03 23:27:22] 2026-03-03 22:26:26,895 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 23:27:22] 2026-03-03 22:26:26,896 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 23:27:22] 2026-03-03 22:26:26,920 | INFO     | did not find any defunct processes belonging to 613796
[2026-03-03 23:27:22] 2026-03-03 22:26:26,945 | INFO     | did not find any defunct processes belonging to 613796
[2026-03-03 23:27:22] 2026-03-03 22:26:26,946 | INFO     | ready for new job
[2026-03-03 23:27:22] 2026-03-03 22:26:26,946 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 23:27:22] 2026-03-03 22:26:26,948 | INFO     | **************************************
[2026-03-03 23:27:22] 2026-03-03 22:26:26,948 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 23:27:22] 2026-03-03 22:26:26,948 | INFO     | **************************************
[2026-03-03 23:27:22] 2026-03-03 22:26:26,948 | INFO     | 
[2026-03-03 23:27:22] 2026-03-03 22:26:26,953 | INFO     | architecture information:
[2026-03-03 23:27:22] 2026-03-03 22:26:26,954 | INFO     | executing command: cat /etc/os-release
[2026-03-03 23:27:22] 2026-03-03 22:26:26,969 | INFO     | cat /etc/os-release:
[2026-03-03 23:27:22] NAME="CentOS Linux"
[2026-03-03 23:27:22] VERSION="7 (Core)"
[2026-03-03 23:27:22] ID="centos"
[2026-03-03 23:27:22] ID_LIKE="rhel fedora"
[2026-03-03 23:27:22] VERSION_ID="7"
[2026-03-03 23:27:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 23:27:22] ANSI_COLOR="0;31"
[2026-03-03 23:27:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 23:27:22] HOME_URL="https://www.centos.org/"
[2026-03-03 23:27:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 23:27:22] 
[2026-03-03 23:27:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 23:27:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 23:27:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 23:27:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 23:27:22] 
[2026-03-03 23:27:22] 2026-03-03 22:26:26,970 | INFO     | **************************************
[2026-03-03 23:27:22] 2026-03-03 22:26:27,059 | WARNING  | process 613796 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 23:27:22] 2026-03-03 22:26:27,316 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 23:27:22] 2026-03-03 22:26:27,473 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2026-03-03 23:27:22] 2026-03-03 22:26:27,488 | INFO     | sufficient remaining disk space (674783821824 B)
[2026-03-03 23:27:22] 2026-03-03 22:26:27,489 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 23:27:22] 2026-03-03 22:26:27,489 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 23:27:22] 2026-03-03 22:26:27,489 | INFO     | update_server=False
[2026-03-03 23:27:22] 2026-03-03 22:26:27,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 23:27:22] 2026-03-03 22:26:27,672 | INFO     | number of running child processes to parent process 613796: 1
[2026-03-03 23:27:22] 2026-03-03 22:26:27,672 | INFO     | maximum number of monitored processes: 6
[2026-03-03 23:27:22] 2026-03-03 22:26:27,673 | INFO     | aborting job monitoring since job object (job id=7036056704) has expired
[2026-03-03 23:27:22] 2026-03-03 22:26:27,673 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 23:27:22] 2026-03-03 22:26:27,673 | INFO     | will abort loop
[2026-03-03 23:27:22] 2026-03-03 22:26:28,010 | INFO     | all data control threads have been joined
[2026-03-03 23:27:22] 2026-03-03 22:26:28,224 | INFO     | all payload control threads have been joined
[2026-03-03 23:27:22] 2026-03-03 22:26:28,235 | INFO     | all job control threads have been joined
[2026-03-03 23:27:22] 2026-03-03 22:26:28,495 | INFO     | [job] retrieve thread has finished
[2026-03-03 23:27:22] 2026-03-03 22:26:28,678 | INFO     | [job] job monitor thread has finished
[2026-03-03 23:27:22] 2026-03-03 22:26:28,679 | INFO     | [payload] failed_post thread has finished
[2026-03-03 23:27:22] 2026-03-03 22:26:28,796 | INFO     | [data] copytool_in thread has finished
[2026-03-03 23:27:22] 2026-03-03 22:26:28,819 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 23:27:22] 2026-03-03 22:26:28,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 23:27:22] 2026-03-03 22:26:28,926 | INFO     | [job] validate thread has finished
[2026-03-03 23:27:22] 2026-03-03 22:26:29,015 | INFO     | [data] control thread has finished
[2026-03-03 23:27:22] 2026-03-03 22:26:29,027 | INFO     | [payload] validate_post thread has finished
[2026-03-03 23:27:22] 2026-03-03 22:26:29,229 | INFO     | [payload] control thread has finished
[2026-03-03 23:27:22] 2026-03-03 22:26:29,240 | INFO     | [job] control thread has finished
[2026-03-03 23:27:22] 2026-03-03 22:26:29,270 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 23:27:22] 2026-03-03 22:26:29,604 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 23:27:22] 2026-03-03 22:26:29,720 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 23:27:22] 2026-03-03 22:26:29,893 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 23:27:22] 2026-03-03 22:26:30,744 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 23:27:22] 2026-03-03 22:26:30,874 | INFO     | [data] copytool_out thread has finished
[2026-03-03 23:27:22] 2026-03-03 22:26:30,898 | INFO     | [job] queue monitor thread has finished
[2026-03-03 23:27:22] 2026-03-03 22:26:34,750 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 23:27:22] 2026-03-03 22:26:58,366 | INFO     | PID=609043 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-03 23:27:22] 2026-03-03 22:26:58,367 | INFO     | .. there are 12 such processes running
[2026-03-03 23:27:22] 2026-03-03 22:26:58,368 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 23:27:22] 2026-03-03 22:26:58,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 23:27:22] 2026-03-03 22:26:58,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 23:27:22] 2026-03-03 22:27:17,368 | INFO     | [monitor] cgroup control has ended
[2026-03-03 23:27:22] 2026-03-03 22:27:17,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22462202255168)>', '<ExcThread(monitor, started 22461965154048)>']
[2026-03-03 23:27:22] 2026-03-03 22:27:18,466 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 23:27:22] 2026-03-03 22:27:18,466 | INFO     | [monitor] control thread has ended
[2026-03-03 23:27:22] 2026-03-03 22:27:22,512 | INFO     | all workflow threads have been joined
[2026-03-03 23:27:22] 2026-03-03 22:27:22,512 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 23:27:22] 2026-03-03 22:27:22,513 | INFO     | traces error code: 0
[2026-03-03 23:27:22] 2026-03-03 22:27:22,513 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 23:27:22] 2026-03-03 22:27:22,661 [wrapper] ==== pilot stdout END ====
[2026-03-03 23:27:22] 2026-03-03 22:27:22,664 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 23:27:22] 2026-03-03 22:27:22,666 [wrapper] pilotpid: 609043
[2026-03-03 23:27:22] 2026-03-03 22:27:22,669 [wrapper] Pilot exit status: 0
[2026-03-03 23:27:22] 2026-03-03 22:27:22,680 [wrapper] pandaids: 7036056704
[2026-03-03 23:27:22] 2026-03-03 22:27:22,749 [wrapper] cleanup supervisor_pilot  739095 609044
[2026-03-03 23:27:22] 2026-03-03 22:27:22,752 [wrapper] Test setup, not cleaning
[2026-03-03 23:27:22] 2026-03-03 22:27:22,755 [wrapper] apfmon messages muted
[2026-03-03 23:27:22] 2026-03-03 22:27:22,758 [wrapper] ==== wrapper stdout END ====
[2026-03-03 23:27:22] 2026-03-03 22:27:22,760 [wrapper] ==== wrapper stderr END ====
[2026-03-03 23:27:22]  *** Error codes and diagnostics ***
[2026-03-03 23:27:22]     "exeErrorCode": 0,
[2026-03-03 23:27:22]     "exeErrorDiag": "",
[2026-03-03 23:27:22]     "pilotErrorCode": 0,
[2026-03-03 23:27:22]     "pilotErrorDiag": "",
[2026-03-03 23:27:22]  *** Listing of results directory ***
[2026-03-03 23:27:22] total 487592
[2026-03-03 23:27:22] -rw-r--r-- 1 boinc boinc    584627 Mar  2 18:50 pilot3.tar.gz
[2026-03-03 23:27:22] -rw-r--r-- 1 boinc boinc      5111 Mar  2 19:01 queuedata.json
[2026-03-03 23:27:22] -rwx------ 1 boinc boinc     36322 Mar  2 19:02 runpilot2-wrapper.sh
[2026-03-03 23:27:22] -rw-r--r-- 1 boinc boinc       100 Mar  3 19:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 23:27:22] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 19:43 run_atlas
[2026-03-03 23:27:22] -rw-r--r-- 1 boinc boinc       105 Mar  3 19:43 job.xml
[2026-03-03 23:27:22] -rw-r--r-- 1 boinc boinc      6638 Mar  3 19:43 init_data.xml
[2026-03-03 23:27:22] -rw-r--r-- 2 boinc boinc 276597773 Mar  3 19:43 EVNT.48220221._000076.pool.root.1
[2026-03-03 23:27:22] -rw-r--r-- 2 boinc boinc     15845 Mar  3 19:43 start_atlas.sh
[2026-03-03 23:27:22] drwxrwx--x 2 boinc boinc      4096 Mar  3 19:43 shared
[2026-03-03 23:27:22] -rw-r--r-- 2 boinc boinc    597958 Mar  3 19:43 input.tar.gz
[2026-03-03 23:27:22] -rw-r--r-- 1 boinc boinc         0 Mar  3 19:43 boinc_lockfile
[2026-03-03 23:27:22] -rw-r--r-- 1 boinc boinc      2561 Mar  3 19:43 pandaJob.out
[2026-03-03 23:27:22] -rw------- 1 boinc boinc    998492 Mar  3 19:43 agis_schedconf.cvmfs.json
[2026-03-03 23:27:22] -rw------- 1 boinc boinc       452 Mar  3 19:43 workernode_map.json
[2026-03-03 23:27:22] drwx------ 5 boinc boinc      4096 Mar  3 19:43 pilot3
[2026-03-03 23:27:22] -rw------- 1 boinc boinc 214205514 Mar  3 23:25 HITS.48838586._001962.pool.root.1
[2026-03-03 23:27:22] -rw-r--r-- 1 boinc boinc       530 Mar  3 23:26 boinc_task_state.xml
[2026-03-03 23:27:22] -rw------- 1 boinc boinc      1033 Mar  3 23:26 memory_monitor_summary.json
[2026-03-03 23:27:22] -rw------- 1 boinc boinc   1516092 Mar  3 23:26 agis_ddmendpoints.agis.ALL.json
[2026-03-03 23:27:22] -rw------- 1 boinc boinc    399634 Mar  3 23:26 log.48838586._001962.job.log.tgz.1
[2026-03-03 23:27:22] -rw------- 1 boinc boinc      6402 Mar  3 23:26 heartbeat.json
[2026-03-03 23:27:22] -rw------- 1 boinc boinc        95 Mar  3 23:26 pilot_heartbeat.json
[2026-03-03 23:27:22] -rw-r--r-- 1 boinc boinc        28 Mar  3 23:27 wrapper_checkpoint.txt
[2026-03-03 23:27:22] -rw-r--r-- 1 boinc boinc      8192 Mar  3 23:27 boinc_mmap_file
[2026-03-03 23:27:22] -rw------- 1 boinc boinc      5359 Mar  3 23:27 pilotlog.txt
[2026-03-03 23:27:22] -rw------- 1 boinc boinc   1881501 Mar  3 23:27 log.48838586._001962.job.log.1
[2026-03-03 23:27:22] -rw------- 1 boinc boinc       357 Mar  3 23:27 output.list
[2026-03-03 23:27:22] -rw-r--r-- 1 boinc boinc       620 Mar  3 23:27 runtime_log
[2026-03-03 23:27:22] -rw------- 1 boinc boinc   2293760 Mar  3 23:27 result.tar.gz
[2026-03-03 23:27:22] -rw-r--r-- 1 boinc boinc      9205 Mar  3 23:27 runtime_log.err
[2026-03-03 23:27:22] -rw------- 1 boinc boinc       665 Mar  3 23:27 bQjKDmFmMH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmIKELDmjBu2Nm.diag
[2026-03-03 23:27:22] -rw-r--r-- 1 boinc boinc     20856 Mar  3 23:27 stderr.txt
[2026-03-03 23:27:22] HITS file was successfully produced:
[2026-03-03 23:27:22] -rw------- 1 boinc boinc 214205514 Mar  3 23:25 shared/HITS.pool.root.1
[2026-03-03 23:27:22]  *** Contents of shared directory: ***
[2026-03-03 23:27:22] total 482152
[2026-03-03 23:27:22] -rw-r--r-- 2 boinc boinc 276597773 Mar  3 19:43 ATLAS.root_0
[2026-03-03 23:27:22] -rw-r--r-- 2 boinc boinc     15845 Mar  3 19:43 start_atlas.sh
[2026-03-03 23:27:22] -rw-r--r-- 2 boinc boinc    597958 Mar  3 19:43 input.tar.gz
[2026-03-03 23:27:22] -rw------- 1 boinc boinc 214205514 Mar  3 23:25 HITS.pool.root.1
[2026-03-03 23:27:22] -rw------- 1 boinc boinc   2293760 Mar  3 23:27 result.tar.gz
23:27:24 (604960): run_atlas exited; CPU time 51777.739961
23:27:24 (604960): called boinc_finish(0)

</stderr_txt>
]]>

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