Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:30:31 (17407): wrapper (7.7.26015): starting
11:30:31 (17407): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 11:30:31] Arguments: --nthreads 4
[2026-03-03 11:30:31] Threads: 4
[2026-03-03 11:30:31] Checking for CVMFS
[2026-03-03 11:30:31] No cvmfs_config command found, will try listing directly
[2026-03-03 11:30:31] CVMFS is ok
[2026-03-03 11:30:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 11:30:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 11:30:31] Further information can be found at the LHC@home message board.
[2026-03-03 11:30:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 11:30:31] Checking for apptainer binary...
[2026-03-03 11:30:31] which: no apptainer in ((null))
[2026-03-03 11:30:31] apptainer is not installed, using version from CVMFS
[2026-03-03 11:30:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 11:30:31] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot236/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-03 11:30:31] apptainer works
[2026-03-03 11:30:31] Set ATHENA_PROC_NUMBER=4
[2026-03-03 11:30:31] Set ATHENA_CORE_NUMBER=4
[2026-03-03 11:30:31] Starting ATLAS job with PandaID=7036047541
[2026-03-03 11:30:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot236/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 16:02:56]  *** The last 200 lines of the pilot log: ***
[2026-03-03 16:02:56] 2026-03-03 15:01:28,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 16:02:56] 2026-03-03 15:01:28,545 | INFO     | job 7036047541 has state=finished
[2026-03-03 16:02:56] 2026-03-03 15:01:28,545 | INFO     | preparing for final server update for job 7036047541 in state='finished'
[2026-03-03 16:02:56] 2026-03-03 15:01:28,545 | INFO     | reading metadata from: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7036047541/jobReport.json
[2026-03-03 16:02:56] 2026-03-03 15:01:28,547 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot236/slots/0/workernode_map.json
[2026-03-03 16:02:56] 2026-03-03 15:01:28,547 | INFO     | this job has now completed (state=finished)
[2026-03-03 16:02:56] 2026-03-03 15:01:28,547 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 16:02:56] 2026-03-03 15:01:28,547 | INFO     | log transfer has been attempted: DONE
[2026-03-03 16:02:56] 2026-03-03 15:01:28,547 | INFO     | job 7036047541 has finished - writing final server update
[2026-03-03 16:02:56] 2026-03-03 15:01:28,548 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_19507/.job.ad'
[2026-03-03 16:02:56] 2026-03-03 15:01:28,548 | INFO     | total number of processed events: 400 (read)
[2026-03-03 16:02:56] 2026-03-03 15:01:28,565 | INFO     | using path: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7036047541/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 16:02:56] 2026-03-03 15:01:28,565 | INFO     | extracted standard info from prmon json
[2026-03-03 16:02:56] 2026-03-03 15:01:28,565 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 16:02:56] 2026-03-03 15:01:28,565 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 16:02:56] 2026-03-03 15:01:28,565 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 16:02:56] 2026-03-03 15:01:28,566 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 16:02:56] 2026-03-03 15:01:28,568 | INFO     | fitting pss+swap vs Time
[2026-03-03 16:02:56] 2026-03-03 15:01:28,568 | INFO     | sum of square deviations: 5836025702.5
[2026-03-03 16:02:56] 2026-03-03 15:01:28,569 | INFO     | sum of deviations: 33826686972.0
[2026-03-03 16:02:56] 2026-03-03 15:01:28,569 | INFO     | mean x: 1772541949.5
[2026-03-03 16:02:56] 2026-03-03 15:01:28,570 | INFO     | mean y: 2338796.120300752
[2026-03-03 16:02:56] 2026-03-03 15:01:28,570 | INFO     | intersect: -10271642972.806826
[2026-03-03 16:02:56] 2026-03-03 15:01:28,570 | INFO     | chi2: 1.0899527322087212
[2026-03-03 16:02:56] 2026-03-03 15:01:28,570 | INFO     | sum of square deviations: 5513070810.0
[2026-03-03 16:02:56] 2026-03-03 15:01:28,571 | INFO     | sum of deviations: 32936073918.0
[2026-03-03 16:02:56] 2026-03-03 15:01:28,571 | INFO     | mean x: 1772541797.0
[2026-03-03 16:02:56] 2026-03-03 15:01:28,571 | INFO     | mean y: 2338375.620689655
[2026-03-03 16:02:56] 2026-03-03 15:01:28,571 | INFO     | intersect: -10587144266.764698
[2026-03-03 16:02:56] 2026-03-03 15:01:28,571 | INFO     | chi2: 1.090232630381447
[2026-03-03 16:02:56] 2026-03-03 15:01:28,571 | INFO     | current chi2=1.090232630381447 (change=-0.02567984504781887 %)
[2026-03-03 16:02:56] 2026-03-03 15:01:28,571 | INFO     | right removable region: 260
[2026-03-03 16:02:56] 2026-03-03 15:01:28,571 | INFO     | sum of square deviations: 5513070810.0
[2026-03-03 16:02:56] 2026-03-03 15:01:28,572 | INFO     | sum of deviations: 6316424828.000001
[2026-03-03 16:02:56] 2026-03-03 15:01:28,572 | INFO     | mean x: 1772542102.0
[2026-03-03 16:02:56] 2026-03-03 15:01:28,572 | INFO     | mean y: 2351649.38697318
[2026-03-03 16:02:56] 2026-03-03 15:01:28,573 | INFO     | intersect: -2028481860.2134795
[2026-03-03 16:02:56] 2026-03-03 15:01:28,573 | INFO     | chi2: 0.0016607581776248398
[2026-03-03 16:02:56] 2026-03-03 15:01:28,573 | INFO     | current chi2=0.0016607581776248398 (change=99.84763025693239 %)
[2026-03-03 16:02:56] 2026-03-03 15:01:28,573 | INFO     | sum of square deviations: 5202255680.0
[2026-03-03 16:02:56] 2026-03-03 15:01:28,574 | INFO     | sum of deviations: 5394660904.0
[2026-03-03 16:02:56] 2026-03-03 15:01:28,574 | INFO     | mean x: 1772542254.5
[2026-03-03 16:02:56] 2026-03-03 15:01:28,574 | INFO     | mean y: 2352099.2578125
[2026-03-03 16:02:56] 2026-03-03 15:01:28,574 | INFO     | intersect: -1835747561.5876093
[2026-03-03 16:02:56] 2026-03-03 15:01:28,574 | INFO     | chi2: 0.0013146147945505711
[2026-03-03 16:02:56] 2026-03-03 15:01:28,574 | INFO     | current chi2=0.0013146147945505711 (change=20.84249156426321 %)
[2026-03-03 16:02:56] 2026-03-03 15:01:28,574 | INFO     | left removable region: 20
[2026-03-03 16:02:56] 2026-03-03 15:01:28,574 | INFO     | sum of square deviations: 4286517580.0
[2026-03-03 16:02:56] 2026-03-03 15:01:28,575 | INFO     | sum of deviations: 4552341916.0
[2026-03-03 16:02:56] 2026-03-03 15:01:28,575 | INFO     | mean x: 1772542376.5
[2026-03-03 16:02:56] 2026-03-03 15:01:28,575 | INFO     | mean y: 2352133.825
[2026-03-03 16:02:56] 2026-03-03 15:01:28,575 | INFO     | intersect: -1880112782.7022297
[2026-03-03 16:02:56] 2026-03-03 15:01:28,575 | INFO     | chi2: 0.0012168282959437813
[2026-03-03 16:02:56] 2026-03-03 15:01:28,575 | INFO     | current memory leak: 1.06 B/s (using 240 data points, chi2=0.00)
[2026-03-03 16:02:56] 2026-03-03 15:01:28,576 | INFO     | could have reported an average CPU frequency of 3587 MHz (12 samples)
[2026-03-03 16:02:56] 2026-03-03 15:01:28,576 | INFO     | ..............................
[2026-03-03 16:02:56] 2026-03-03 15:01:28,576 | INFO     | . Timing measurements:
[2026-03-03 16:02:56] 2026-03-03 15:01:28,576 | INFO     | . get job = 0 s
[2026-03-03 16:02:56] 2026-03-03 15:01:28,576 | INFO     | . initial setup = 6 s
[2026-03-03 16:02:56] 2026-03-03 15:01:28,576 | INFO     | . payload setup = 5 s
[2026-03-03 16:02:56] 2026-03-03 15:01:28,576 | INFO     | . stage-in = 0 s
[2026-03-03 16:02:56] 2026-03-03 15:01:28,576 | INFO     | . payload execution = 16217 s
[2026-03-03 16:02:56] 2026-03-03 15:01:28,576 | INFO     | . stage-out = 0 s
[2026-03-03 16:02:56] 2026-03-03 15:01:28,576 | INFO     | . log creation = 0 s
[2026-03-03 16:02:56] 2026-03-03 15:01:28,576 | INFO     | ..............................
[2026-03-03 16:02:56] 2026-03-03 15:01:28,620 | INFO     | 
[2026-03-03 16:02:56] 2026-03-03 15:01:28,620 | INFO     | job summary report
[2026-03-03 16:02:56] 2026-03-03 15:01:28,620 | INFO     | --------------------------------------------------
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | PanDA job id: 7036047541
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | task id: 48850113
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | errors: (none)
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | pilot state: finished 
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | transexitcode: 0
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | exeerrorcode: 0
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | exeerrordiag: 
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | exitcode: 0
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | exitmsg: OK
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | cpuconsumptiontime: 63005 s
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | nevents: 400
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | neventsw: 0
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | pid: 37365
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | pgrp: 37365
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | corecount: 4
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | event service: False
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | sizes: {0: 2287142, 11: 2287142, 16226: 2318575, 16229: 2327597, 16230: 2327653, 16231: 2327847}
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | --------------------------------------------------
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | 
[2026-03-03 16:02:56] 2026-03-03 15:01:28,621 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot236/slots/0
[2026-03-03 16:02:56] 2026-03-03 15:01:28,639 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,639 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,639 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,639 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,639 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,639 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,640 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,640 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,640 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,640 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,640 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,640 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,640 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 16:02:56] 2026-03-03 15:01:28,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,640 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 16:02:56] 2026-03-03 15:01:28,640 | INFO     | job 7036047541 has completed (purged errors)
[2026-03-03 16:02:56] 2026-03-03 15:01:28,640 | INFO     | overall cleanup function is called
[2026-03-03 16:02:56] 2026-03-03 15:01:29,647 | INFO     | --- collectZombieJob: --- 10, [37365]
[2026-03-03 16:02:56] 2026-03-03 15:01:29,647 | INFO     | zombie collector waiting for pid 37365
[2026-03-03 16:02:56] 2026-03-03 15:01:29,647 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 16:02:56] 2026-03-03 15:01:29,647 | INFO     | collected zombie processes
[2026-03-03 16:02:56] 2026-03-03 15:01:29,647 | INFO     | will attempt to kill all subprocesses of pid=37365
[2026-03-03 16:02:56] 2026-03-03 15:01:30,181 | INFO     | process IDs to be killed: [37365] (in reverse order)
[2026-03-03 16:02:56] 2026-03-03 15:01:30,419 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 16:02:56] 2026-03-03 15:01:30,419 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 16:02:56] 2026-03-03 15:01:30,452 | INFO     | did not find any defunct processes belonging to 37365
[2026-03-03 16:02:56] 2026-03-03 15:01:30,484 | INFO     | did not find any defunct processes belonging to 37365
[2026-03-03 16:02:56] 2026-03-03 15:01:30,484 | INFO     | ready for new job
[2026-03-03 16:02:56] 2026-03-03 15:01:30,484 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 16:02:56] 2026-03-03 15:01:30,486 | INFO     | **************************************
[2026-03-03 16:02:56] 2026-03-03 15:01:30,486 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 16:02:56] 2026-03-03 15:01:30,486 | INFO     | **************************************
[2026-03-03 16:02:56] 2026-03-03 15:01:30,486 | INFO     | 
[2026-03-03 16:02:56] 2026-03-03 15:01:30,491 | INFO     | architecture information:
[2026-03-03 16:02:56] 2026-03-03 15:01:30,491 | INFO     | executing command: cat /etc/os-release
[2026-03-03 16:02:56] 2026-03-03 15:01:30,504 | INFO     | cat /etc/os-release:
[2026-03-03 16:02:56] NAME="CentOS Linux"
[2026-03-03 16:02:56] VERSION="7 (Core)"
[2026-03-03 16:02:56] ID="centos"
[2026-03-03 16:02:56] ID_LIKE="rhel fedora"
[2026-03-03 16:02:56] VERSION_ID="7"
[2026-03-03 16:02:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 16:02:56] ANSI_COLOR="0;31"
[2026-03-03 16:02:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 16:02:56] HOME_URL="https://www.centos.org/"
[2026-03-03 16:02:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 16:02:56] 
[2026-03-03 16:02:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 16:02:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 16:02:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 16:02:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 16:02:56] 
[2026-03-03 16:02:56] 2026-03-03 15:01:30,504 | INFO     | **************************************
[2026-03-03 16:02:56] 2026-03-03 15:01:31,007 | INFO     | executing command: df -mP /var/lib/boinc/var/slot236/slots/0
[2026-03-03 16:02:56] 2026-03-03 15:01:31,022 | INFO     | sufficient remaining disk space (216588615680 B)
[2026-03-03 16:02:56] 2026-03-03 15:01:31,022 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 16:02:56] 2026-03-03 15:01:31,022 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 16:02:56] 2026-03-03 15:01:31,022 | INFO     | update_server=False
[2026-03-03 16:02:56] 2026-03-03 15:01:31,022 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 16:02:56] 2026-03-03 15:01:31,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 16:02:56] 2026-03-03 15:01:31,533 | INFO     | all data control threads have been joined
[2026-03-03 16:02:56] 2026-03-03 15:01:31,575 | INFO     | all payload control threads have been joined
[2026-03-03 16:02:56] 2026-03-03 15:01:31,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 16:02:56] 2026-03-03 15:01:31,854 | INFO     | aborting loop
[2026-03-03 16:02:56] 2026-03-03 15:01:32,025 | INFO     | [job] retrieve thread has finished
[2026-03-03 16:02:56] 2026-03-03 15:01:32,272 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 16:02:56] 2026-03-03 15:01:32,355 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 16:02:56] 2026-03-03 15:01:32,418 | INFO     | [data] copytool_in thread has finished
[2026-03-03 16:02:56] 2026-03-03 15:01:32,537 | INFO     | all job control threads have been joined
[2026-03-03 16:02:56] 2026-03-03 15:01:32,538 | INFO     | [data] control thread has finished
[2026-03-03 16:02:56] 2026-03-03 15:01:32,544 | INFO     | [payload] validate_post thread has finished
[2026-03-03 16:02:56] 2026-03-03 15:01:32,580 | INFO     | [payload] control thread has finished
[2026-03-03 16:02:56] 2026-03-03 15:01:32,859 | INFO     | [job] job monitor thread has finished
[2026-03-03 16:02:56] 2026-03-03 15:01:33,129 | INFO     | [payload] failed_post thread has finished
[2026-03-03 16:02:56] 2026-03-03 15:01:33,221 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 16:02:56] 2026-03-03 15:01:33,289 | INFO     | [data] copytool_out thread has finished
[2026-03-03 16:02:56] 2026-03-03 15:01:33,489 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 16:02:56] 2026-03-03 15:01:33,507 | INFO     | [job] validate thread has finished
[2026-03-03 16:02:56] 2026-03-03 15:01:33,542 | INFO     | [job] control thread has finished
[2026-03-03 16:02:56] 2026-03-03 15:01:33,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 16:02:56] 2026-03-03 15:01:33,630 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 16:02:56] 2026-03-03 15:01:34,635 | INFO     | [job] queue monitor thread has finished
[2026-03-03 16:02:56] 2026-03-03 15:01:37,563 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 16:02:56] 2026-03-03 15:02:00,273 | INFO     | PID=25244 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-03 16:02:56] 2026-03-03 15:02:00,273 | INFO     | .. there are 35 such processes running
[2026-03-03 16:02:56] 2026-03-03 15:02:00,273 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 16:02:56] 2026-03-03 15:02:00,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 16:02:56] 2026-03-03 15:02:00,273 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 16:02:56] 2026-03-03 15:02:12,635 | INFO     | [monitor] cgroup control has ended
[2026-03-03 16:02:56] 2026-03-03 15:02:13,994 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22707841783616)>', '<ExcThread(monitor, started 22707606669056)>']
[2026-03-03 16:02:56] 2026-03-03 15:02:14,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 16:02:56] 2026-03-03 15:02:14,344 | INFO     | [monitor] control thread has ended
[2026-03-03 16:02:56] 2026-03-03 15:02:19,019 | INFO     | all workflow threads have been joined
[2026-03-03 16:02:56] 2026-03-03 15:02:19,019 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 16:02:56] 2026-03-03 15:02:19,019 | INFO     | traces error code: 0
[2026-03-03 16:02:56] 2026-03-03 15:02:19,019 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 16:02:56] 2026-03-03 15:02:19,140 [wrapper] ==== pilot stdout END ====
[2026-03-03 16:02:56] 2026-03-03 15:02:19,143 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 16:02:56] 2026-03-03 15:02:19,145 [wrapper] pilotpid: 25244
[2026-03-03 16:02:56] 2026-03-03 15:02:19,147 [wrapper] Pilot exit status: 0
[2026-03-03 16:02:56] 2026-03-03 15:02:19,156 [wrapper] pandaids: 7036047541
[2026-03-03 16:02:56] 2026-03-03 15:02:19,302 [wrapper] cleanup supervisor_pilot 1754517 25245
[2026-03-03 16:02:56] 2026-03-03 15:02:19,305 [wrapper] Test setup, not cleaning
[2026-03-03 16:02:56] 2026-03-03 15:02:19,307 [wrapper] apfmon messages muted
[2026-03-03 16:02:56] 2026-03-03 15:02:19,309 [wrapper] ==== wrapper stdout END ====
[2026-03-03 16:02:56] 2026-03-03 15:02:19,312 [wrapper] ==== wrapper stderr END ====
[2026-03-03 16:02:56]  *** Error codes and diagnostics ***
[2026-03-03 16:02:56]     "exeErrorCode": 0,
[2026-03-03 16:02:56]     "exeErrorDiag": "",
[2026-03-03 16:02:56]     "pilotErrorCode": 0,
[2026-03-03 16:02:56]     "pilotErrorDiag": "",
[2026-03-03 16:02:56]  *** Listing of results directory ***
[2026-03-03 16:02:56] total 495808
[2026-03-03 16:02:56] -rw-r--r--. 1 boinc boinc    584627 Mar  2 18:50 pilot3.tar.gz
[2026-03-03 16:02:56] -rwx------. 1 boinc boinc     36322 Mar  2 18:53 runpilot2-wrapper.sh
[2026-03-03 16:02:56] -rw-r--r--. 1 boinc boinc      5111 Mar  2 18:53 queuedata.json
[2026-03-03 16:02:56] -rw-r--r--. 1 boinc boinc       100 Mar  3 11:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 16:02:56] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 11:30 run_atlas
[2026-03-03 16:02:56] -rw-r--r--. 1 boinc boinc       105 Mar  3 11:30 job.xml
[2026-03-03 16:02:56] -rw-r--r--. 1 boinc boinc      6704 Mar  3 11:30 init_data.xml
[2026-03-03 16:02:56] -rw-r--r--. 2 boinc boinc 236290445 Mar  3 11:30 EVNT.48458247._000001.pool.root.1
[2026-03-03 16:02:56] -rw-r--r--. 2 boinc boinc     15845 Mar  3 11:30 start_atlas.sh
[2026-03-03 16:02:56] drwxrwx--x. 2 boinc boinc      4096 Mar  3 11:30 shared
[2026-03-03 16:02:56] -rw-r--r--. 2 boinc boinc    597951 Mar  3 11:30 input.tar.gz
[2026-03-03 16:02:56] -rw-r--r--. 1 boinc boinc         0 Mar  3 11:30 boinc_lockfile
[2026-03-03 16:02:56] -rw-r--r--. 1 boinc boinc      2608 Mar  3 11:30 pandaJob.out
[2026-03-03 16:02:56] -rw-------. 1 boinc boinc    998420 Mar  3 11:30 agis_schedconf.cvmfs.json
[2026-03-03 16:02:56] -rw-------. 1 boinc boinc       443 Mar  3 11:30 workernode_map.json
[2026-03-03 16:02:56] drwx------. 5 boinc boinc      4096 Mar  3 11:30 pilot3
[2026-03-03 16:02:56] -rw-------. 1 boinc boinc 262150139 Mar  3 16:00 HITS.48850113._000005.pool.root.1
[2026-03-03 16:02:56] -rw-r--r--. 1 boinc boinc       528 Mar  3 16:01 boinc_task_state.xml
[2026-03-03 16:02:56] -rw-------. 1 boinc boinc      1034 Mar  3 16:01 memory_monitor_summary.json
[2026-03-03 16:02:56] -rw-------. 1 boinc boinc        95 Mar  3 16:01 pilot_heartbeat.json
[2026-03-03 16:02:56] -rw-------. 1 boinc boinc   1516104 Mar  3 16:01 agis_ddmendpoints.agis.ALL.json
[2026-03-03 16:02:56] -rw-------. 1 boinc boinc    417740 Mar  3 16:01 log.48850113._000005.job.log.tgz.1
[2026-03-03 16:02:56] -rw-------. 1 boinc boinc      6347 Mar  3 16:01 heartbeat.json
[2026-03-03 16:02:56] -rw-------. 1 boinc boinc      4829 Mar  3 16:02 pilotlog.txt
[2026-03-03 16:02:56] -rw-------. 1 boinc boinc   2249233 Mar  3 16:02 log.48850113._000005.job.log.1
[2026-03-03 16:02:56] -rw-------. 1 boinc boinc       357 Mar  3 16:02 output.list
[2026-03-03 16:02:56] -rw-r--r--. 1 boinc boinc       620 Mar  3 16:02 runtime_log
[2026-03-03 16:02:56] -rw-------. 1 boinc boinc   2682880 Mar  3 16:02 result.tar.gz
[2026-03-03 16:02:56] -rw-------. 1 boinc boinc       666 Mar  3 16:02 xNKLDmrdMH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmbBCLDmpIJTDn.diag
[2026-03-03 16:02:56] -rw-r--r--. 1 boinc boinc      9222 Mar  3 16:02 runtime_log.err
[2026-03-03 16:02:56] -rw-r--r--. 1 boinc boinc        26 Mar  3 16:02 wrapper_checkpoint.txt
[2026-03-03 16:02:56] -rw-r--r--. 1 boinc boinc      8192 Mar  3 16:02 boinc_mmap_file
[2026-03-03 16:02:56] -rw-r--r--. 1 boinc boinc     21113 Mar  3 16:02 stderr.txt
[2026-03-03 16:02:56] HITS file was successfully produced:
[2026-03-03 16:02:56] -rw-------. 1 boinc boinc 262150139 Mar  3 16:00 shared/HITS.pool.root.1
[2026-03-03 16:02:56]  *** Contents of shared directory: ***
[2026-03-03 16:02:56] total 489992
[2026-03-03 16:02:56] -rw-r--r--. 2 boinc boinc 236290445 Mar  3 11:30 ATLAS.root_0
[2026-03-03 16:02:56] -rw-r--r--. 2 boinc boinc     15845 Mar  3 11:30 start_atlas.sh
[2026-03-03 16:02:56] -rw-r--r--. 2 boinc boinc    597951 Mar  3 11:30 input.tar.gz
[2026-03-03 16:02:56] -rw-------. 1 boinc boinc 262150139 Mar  3 16:00 HITS.pool.root.1
[2026-03-03 16:02:56] -rw-------. 1 boinc boinc   2682880 Mar  3 16:02 result.tar.gz
16:02:57 (17407): run_atlas exited; CPU time 63846.372981
16:02:57 (17407): called boinc_finish(0)

</stderr_txt>
]]>

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