Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
01:02:55 (1489263): wrapper (7.7.26015): starting
01:02:55 (1489263): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 01:02:55] Arguments: --nthreads 12
[2026-03-03 01:02:55] Threads: 12
[2026-03-03 01:02:55] Checking for CVMFS
[2026-03-03 01:02:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 01:02:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 01:02:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 01:02:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 01:02:58] 2.13.3.0 1140029 1152 45496 156835 2 50 4097887 6144000 0 130560 0 446675 99.982 42438 844 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-03 01:02:58] CVMFS is ok
[2026-03-03 01:02:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 01:02:58] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-03 01:02:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-03 01:02:58] Further information can be found at the LHC@home message board.
[2026-03-03 01:02:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 01:02:58] Checking for apptainer binary...
[2026-03-03 01:02:58] apptainer is not installed, using version from CVMFS
[2026-03-03 01:02:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 01:02:58] ace
[2026-03-03 01:02:58] apptainer works
[2026-03-03 01:02:58] Set ATHENA_PROC_NUMBER=12
[2026-03-03 01:02:58] Set ATHENA_CORE_NUMBER=12
[2026-03-03 01:02:58] Starting ATLAS job with PandaID=7036056397
[2026-03-03 01:02:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 01:58:33]  *** The last 200 lines of the pilot log: ***
[2026-03-03 01:58:33]  guid=e10edaba-54d3-44cb-8299-d866a3c47e0c
[2026-03-03 01:58:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-03 01:58:33]  is_altstaged=None
[2026-03-03 01:58:33]  is_tar=False
[2026-03-03 01:58:33]  lfn=log.48700890._001676.job.log.tgz.1
[2026-03-03 01:58:33]  mtime=0
[2026-03-03 01:58:33]  protocol_id=None
[2026-03-03 01:58:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-03 01:58:33]  replicas=None
[2026-03-03 01:58:33]  scope=mc23_13p6TeV
[2026-03-03 01:58:33]  status=None
[2026-03-03 01:58:33]  status_code=0
[2026-03-03 01:58:33]  storage_token=
[2026-03-03 01:58:33]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-7036056397/log.48700890._001676.job.log.tgz.1
[2026-03-03 01:58:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/03/log.48700890._001676.job.log.tgz.1
[2026-03-03 01:58:33]  workdir=None
[2026-03-03 01:58:33] ]
[2026-03-03 01:58:33] 2026-03-03 07:57:57,809 | INFO     | transferring file log.48700890._001676.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-7036056397/log.48700890._001676.job.log.tgz.1 to /var/lib/boinc
[2026-03-03 01:58:33] 2026-03-03 07:57:57,809 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-7036056397/log.48700890._001676.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.487008
[2026-03-03 01:58:33] 2026-03-03 07:57:57,821 | INFO     | adding to output.list: log.48700890._001676.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/03/log.48700890._001676.job.log.tg
[2026-03-03 01:58:33] 2026-03-03 07:57:57,822 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 01:58:33] 2026-03-03 07:57:57,822 | INFO     | summary of transferred files:
[2026-03-03 01:58:33] 2026-03-03 07:57:57,822 | INFO     |  -- lfn=log.48700890._001676.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 01:58:33] 2026-03-03 07:57:57,822 | INFO     | stage-out finished correctly
[2026-03-03 01:58:33] 2026-03-03 07:57:58,101 | INFO     | time since job start (3283s) is within the limit (349056.0s)
[2026-03-03 01:58:33] 2026-03-03 07:57:58,723 | INFO     | monitor loop #249: job 0:7036056397 is in state 'finished'
[2026-03-03 01:58:33] 2026-03-03 07:57:58,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 01:58:33] 2026-03-03 07:57:59,951 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 01:58:33] 2026-03-03 07:58:00,105 | INFO     | time since job start (3285s) is within the limit (349056.0s)
[2026-03-03 01:58:33] 2026-03-03 07:58:00,105 | INFO     | 3290s have passed since pilot start - server update state is 'RUNNING'
[2026-03-03 01:58:33] 2026-03-03 07:58:01,226 | INFO     | monitor loop #250: job 0:7036056397 is in state 'finished'
[2026-03-03 01:58:33] 2026-03-03 07:58:01,226 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 01:58:33] 2026-03-03 07:58:01,402 | INFO     | job 7036056397 has state=finished
[2026-03-03 01:58:33] 2026-03-03 07:58:01,403 | INFO     | preparing for final server update for job 7036056397 in state='finished'
[2026-03-03 01:58:33] 2026-03-03 07:58:01,403 | INFO     | reading metadata from: /var/lib/boinc-client/slots/0/PanDA_Pilot-7036056397/jobReport.json
[2026-03-03 01:58:33] 2026-03-03 07:58:01,404 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/0/workernode_map.json
[2026-03-03 01:58:33] 2026-03-03 07:58:01,404 | INFO     | this job has now completed (state=finished)
[2026-03-03 01:58:33] 2026-03-03 07:58:01,404 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 01:58:33] 2026-03-03 07:58:01,404 | INFO     | log transfer has been attempted: DONE
[2026-03-03 01:58:33] 2026-03-03 07:58:01,404 | INFO     | job 7036056397 has finished - writing final server update
[2026-03-03 01:58:33] 2026-03-03 07:58:01,405 | INFO     | total number of processed events: 400 (read)
[2026-03-03 01:58:33] 2026-03-03 07:58:01,406 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-7036056397/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 01:58:33] 2026-03-03 07:58:01,407 | INFO     | extracted standard info from prmon json
[2026-03-03 01:58:33] 2026-03-03 07:58:01,407 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 01:58:33] 2026-03-03 07:58:01,407 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 01:58:33] 2026-03-03 07:58:01,407 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 01:58:33] 2026-03-03 07:58:01,407 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 01:58:33] 2026-03-03 07:58:01,408 | INFO     | fitting pss+swap vs Time
[2026-03-03 01:58:33] 2026-03-03 07:58:01,408 | INFO     | sum of square deviations: 32179208.0
[2026-03-03 01:58:33] 2026-03-03 07:58:01,408 | INFO     | sum of deviations: -400552168.9999999
[2026-03-03 01:58:33] 2026-03-03 07:58:01,408 | INFO     | mean x: 1772523122.0
[2026-03-03 01:58:33] 2026-03-03 07:58:01,408 | INFO     | mean y: 2722713.212765957
[2026-03-03 01:58:33] 2026-03-03 07:58:01,408 | INFO     | intersect: 22066285654.84114
[2026-03-03 01:58:33] 2026-03-03 07:58:01,408 | INFO     | chi2: 0.006451911683147069
[2026-03-03 01:58:33] 2026-03-03 07:58:01,408 | INFO     | current memory leak: -12.45 B/s (using 47 data points, chi2=0.01)
[2026-03-03 01:58:33] 2026-03-03 07:58:01,408 | INFO     | could have reported an average CPU frequency of 2649 MHz (5 samples)
[2026-03-03 01:58:33] 2026-03-03 07:58:01,408 | INFO     | ..............................
[2026-03-03 01:58:33] 2026-03-03 07:58:01,408 | INFO     | . Timing measurements:
[2026-03-03 01:58:33] 2026-03-03 07:58:01,408 | INFO     | . get job = 0 s
[2026-03-03 01:58:33] 2026-03-03 07:58:01,408 | INFO     | . initial setup = 5 s
[2026-03-03 01:58:33] 2026-03-03 07:58:01,408 | INFO     | . payload setup = 3 s
[2026-03-03 01:58:33] 2026-03-03 07:58:01,409 | INFO     | . stage-in = 0 s
[2026-03-03 01:58:33] 2026-03-03 07:58:01,409 | INFO     | . payload execution = 3263 s
[2026-03-03 01:58:33] 2026-03-03 07:58:01,409 | INFO     | . stage-out = 0 s
[2026-03-03 01:58:33] 2026-03-03 07:58:01,409 | INFO     | . log creation = 0 s
[2026-03-03 01:58:33] 2026-03-03 07:58:01,409 | INFO     | ..............................
[2026-03-03 01:58:33] 2026-03-03 07:58:01,450 | INFO     | 
[2026-03-03 01:58:33] 2026-03-03 07:58:01,450 | INFO     | job summary report
[2026-03-03 01:58:33] 2026-03-03 07:58:01,450 | INFO     | --------------------------------------------------
[2026-03-03 01:58:33] 2026-03-03 07:58:01,450 | INFO     | PanDA job id: 7036056397
[2026-03-03 01:58:33] 2026-03-03 07:58:01,450 | INFO     | task id: 48700890
[2026-03-03 01:58:33] 2026-03-03 07:58:01,450 | INFO     | errors: (none)
[2026-03-03 01:58:33] 2026-03-03 07:58:01,450 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 01:58:33] 2026-03-03 07:58:01,450 | INFO     | pilot state: finished 
[2026-03-03 01:58:33] 2026-03-03 07:58:01,450 | INFO     | transexitcode: 0
[2026-03-03 01:58:33] 2026-03-03 07:58:01,450 | INFO     | exeerrorcode: 0
[2026-03-03 01:58:33] 2026-03-03 07:58:01,450 | INFO     | exeerrordiag: 
[2026-03-03 01:58:33] 2026-03-03 07:58:01,450 | INFO     | exitcode: 0
[2026-03-03 01:58:33] 2026-03-03 07:58:01,451 | INFO     | exitmsg: OK
[2026-03-03 01:58:33] 2026-03-03 07:58:01,451 | INFO     | cpuconsumptiontime: 35963 s
[2026-03-03 01:58:33] 2026-03-03 07:58:01,451 | INFO     | nevents: 400
[2026-03-03 01:58:33] 2026-03-03 07:58:01,451 | INFO     | neventsw: 0
[2026-03-03 01:58:33] 2026-03-03 07:58:01,451 | INFO     | pid: 1497984
[2026-03-03 01:58:33] 2026-03-03 07:58:01,451 | INFO     | pgrp: 1497984
[2026-03-03 01:58:33] 2026-03-03 07:58:01,451 | INFO     | corecount: 12
[2026-03-03 01:58:33] 2026-03-03 07:58:01,451 | INFO     | event service: False
[2026-03-03 01:58:33] 2026-03-03 07:58:01,451 | INFO     | sizes: {0: 2282155, 11: 2282155, 3271: 2316702, 3273: 2316702, 3275: 2316928}
[2026-03-03 01:58:33] 2026-03-03 07:58:01,451 | INFO     | --------------------------------------------------
[2026-03-03 01:58:33] 2026-03-03 07:58:01,451 | INFO     | 
[2026-03-03 01:58:33] 2026-03-03 07:58:01,451 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-03-03 01:58:33] 2026-03-03 07:58:01,465 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,465 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,465 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,465 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,465 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,465 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,466 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,466 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 01:58:33] 2026-03-03 07:58:01,466 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,466 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 01:58:33] 2026-03-03 07:58:01,466 | INFO     | job 7036056397 has completed (purged errors)
[2026-03-03 01:58:33] 2026-03-03 07:58:01,466 | INFO     | overall cleanup function is called
[2026-03-03 01:58:33] 2026-03-03 07:58:02,473 | INFO     | --- collectZombieJob: --- 10, [1497984]
[2026-03-03 01:58:33] 2026-03-03 07:58:02,474 | INFO     | zombie collector waiting for pid 1497984
[2026-03-03 01:58:33] 2026-03-03 07:58:02,474 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 01:58:33] 2026-03-03 07:58:02,474 | INFO     | collected zombie processes
[2026-03-03 01:58:33] 2026-03-03 07:58:02,474 | INFO     | will attempt to kill all subprocesses of pid=1497984
[2026-03-03 01:58:33] 2026-03-03 07:58:02,555 | INFO     | process IDs to be killed: [1497984] (in reverse order)
[2026-03-03 01:58:33] 2026-03-03 07:58:02,593 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 01:58:33] 2026-03-03 07:58:02,594 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 01:58:33] 2026-03-03 07:58:02,597 | INFO     | did not find any defunct processes belonging to 1497984
[2026-03-03 01:58:33] 2026-03-03 07:58:02,599 | INFO     | did not find any defunct processes belonging to 1497984
[2026-03-03 01:58:33] 2026-03-03 07:58:02,599 | INFO     | ready for new job
[2026-03-03 01:58:33] 2026-03-03 07:58:02,600 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 01:58:33] 2026-03-03 07:58:02,601 | INFO     | **************************************
[2026-03-03 01:58:33] 2026-03-03 07:58:02,601 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 01:58:33] 2026-03-03 07:58:02,601 | INFO     | **************************************
[2026-03-03 01:58:33] 2026-03-03 07:58:02,601 | INFO     | 
[2026-03-03 01:58:33] 2026-03-03 07:58:02,601 | INFO     | architecture information:
[2026-03-03 01:58:33] 2026-03-03 07:58:02,602 | INFO     | executing command: cat /etc/os-release
[2026-03-03 01:58:33] 2026-03-03 07:58:02,612 | INFO     | cat /etc/os-release:
[2026-03-03 01:58:33] NAME="CentOS Linux"
[2026-03-03 01:58:33] VERSION="7 (Core)"
[2026-03-03 01:58:33] ID="centos"
[2026-03-03 01:58:33] ID_LIKE="rhel fedora"
[2026-03-03 01:58:33] VERSION_ID="7"
[2026-03-03 01:58:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 01:58:33] ANSI_COLOR="0;31"
[2026-03-03 01:58:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 01:58:33] HOME_URL="https://www.centos.org/"
[2026-03-03 01:58:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 01:58:33] 
[2026-03-03 01:58:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 01:58:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 01:58:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 01:58:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 01:58:33] 
[2026-03-03 01:58:33] 2026-03-03 07:58:02,612 | INFO     | **************************************
[2026-03-03 01:58:33] 2026-03-03 07:58:03,115 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-03-03 01:58:33] 2026-03-03 07:58:03,128 | INFO     | sufficient remaining disk space (13129220096 B)
[2026-03-03 01:58:33] 2026-03-03 07:58:03,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 01:58:33] 2026-03-03 07:58:03,128 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 01:58:33] 2026-03-03 07:58:03,129 | INFO     | update_server=False
[2026-03-03 01:58:33] 2026-03-03 07:58:03,129 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 01:58:33] 2026-03-03 07:58:03,129 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 01:58:33] 2026-03-03 07:58:03,129 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 01:58:33] 2026-03-03 07:58:03,129 | INFO     | aborting loop
[2026-03-03 01:58:33] 2026-03-03 07:58:03,231 | INFO     | all payload control threads have been joined
[2026-03-03 01:58:33] 2026-03-03 07:58:03,260 | INFO     | all job control threads have been joined
[2026-03-03 01:58:33] 2026-03-03 07:58:03,306 | INFO     | all data control threads have been joined
[2026-03-03 01:58:33] 2026-03-03 07:58:03,371 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 01:58:33] 2026-03-03 07:58:04,132 | INFO     | [job] queue monitor thread has finished
[2026-03-03 01:58:33] 2026-03-03 07:58:04,133 | INFO     | [job] retrieve thread has finished
[2026-03-03 01:58:33] 2026-03-03 07:58:04,134 | INFO     | [job] job monitor thread has finished
[2026-03-03 01:58:33] 2026-03-03 07:58:04,233 | INFO     | [payload] control thread has finished
[2026-03-03 01:58:33] 2026-03-03 07:58:04,266 | INFO     | [job] control thread has finished
[2026-03-03 01:58:33] 2026-03-03 07:58:04,308 | INFO     | [data] control thread has finished
[2026-03-03 01:58:33] 2026-03-03 07:58:04,375 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 01:58:33] 2026-03-03 07:58:04,554 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 01:58:33] 2026-03-03 07:58:04,816 | INFO     | [payload] validate_post thread has finished
[2026-03-03 01:58:33] 2026-03-03 07:58:04,848 | INFO     | [job] validate thread has finished
[2026-03-03 01:58:33] 2026-03-03 07:58:05,040 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 01:58:33] 2026-03-03 07:58:05,048 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 01:58:33] 2026-03-03 07:58:05,106 | INFO     | [payload] failed_post thread has finished
[2026-03-03 01:58:33] 2026-03-03 07:58:05,221 | INFO     | [data] copytool_in thread has finished
[2026-03-03 01:58:33] 2026-03-03 07:58:05,376 | INFO     | [data] copytool_out thread has finished
[2026-03-03 01:58:33] 2026-03-03 07:58:05,996 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 01:58:33] 2026-03-03 07:58:10,001 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 01:58:33] 2026-03-03 07:58:20,520 | INFO     | [monitor] cgroup control has ended
[2026-03-03 01:58:33] 2026-03-03 07:58:20,973 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139734588442432)>', '<ExcThread(monitor, started 139733506176768)>']
[2026-03-03 01:58:33] 2026-03-03 07:58:25,996 | INFO     | all workflow threads have been joined
[2026-03-03 01:58:33] 2026-03-03 07:58:25,997 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 01:58:33] 2026-03-03 07:58:25,997 | INFO     | traces error code: 0
[2026-03-03 01:58:33] 2026-03-03 07:58:25,997 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 01:58:33] 2026-03-03 07:58:33,279 | INFO     | PID=1493440 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 01:58:33] 2026-03-03 07:58:33,279 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 01:58:33] 2026-03-03 07:58:33,279 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 01:58:33] 2026-03-03 07:58:33,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 01:58:33] 2026-03-03 07:58:33,279 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 01:58:33] 2026-03-03 07:58:33,279 | INFO     | [monitor] control thread has ended
[2026-03-03 01:58:33] 2026-03-03 07:58:33,373 [wrapper] ==== pilot stdout END ====
[2026-03-03 01:58:33] 2026-03-03 07:58:33,376 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 01:58:33] 2026-03-03 07:58:33,381 [wrapper] pilotpid: 1493440
[2026-03-03 01:58:33] 2026-03-03 07:58:33,383 [wrapper] Pilot exit status: 0
[2026-03-03 01:58:33] 2026-03-03 07:58:33,390 [wrapper] pandaids: 7036056397
[2026-03-03 01:58:33] 2026-03-03 07:58:33,414 [wrapper] cleanup supervisor_pilot 1510423 1493441
[2026-03-03 01:58:33] 2026-03-03 07:58:33,416 [wrapper] Test setup, not cleaning
[2026-03-03 01:58:33] 2026-03-03 07:58:33,419 [wrapper] apfmon messages muted
[2026-03-03 01:58:33] 2026-03-03 07:58:33,421 [wrapper] ==== wrapper stdout END ====
[2026-03-03 01:58:33] 2026-03-03 07:58:33,424 [wrapper] ==== wrapper stderr END ====
[2026-03-03 01:58:33]  *** Error codes and diagnostics ***
[2026-03-03 01:58:33]     "exeErrorCode": 0,
[2026-03-03 01:58:33]     "exeErrorDiag": "",
[2026-03-03 01:58:33]     "pilotErrorCode": 0,
[2026-03-03 01:58:33]     "pilotErrorDiag": "",
[2026-03-03 01:58:33]  *** Listing of results directory ***
[2026-03-03 01:58:33] total 334332
[2026-03-03 01:58:33] -rw-r--r-- 1 boinc boinc    584627 Mar  2 11:50 pilot3.tar.gz
[2026-03-03 01:58:33] -rw-r--r-- 1 boinc boinc      5111 Mar  2 12:01 queuedata.json
[2026-03-03 01:58:33] -rwx------ 1 boinc boinc     36322 Mar  2 12:02 runpilot2-wrapper.sh
[2026-03-03 01:58:33] -rw-r--r-- 1 boinc boinc       100 Mar  3 01:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 01:58:33] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 01:02 run_atlas
[2026-03-03 01:58:33] -rw-r--r-- 1 boinc boinc       105 Mar  3 01:02 job.xml
[2026-03-03 01:58:33] -rw-r--r-- 2 boinc boinc     15845 Mar  3 01:02 start_atlas.sh
[2026-03-03 01:58:33] drwxrwx--x 2 boinc boinc      4096 Mar  3 01:02 shared
[2026-03-03 01:58:33] -rw-r--r-- 2 boinc boinc    597930 Mar  3 01:02 input.tar.gz
[2026-03-03 01:58:33] -rw-r--r-- 1 boinc boinc      6987 Mar  3 01:02 init_data.xml
[2026-03-03 01:58:33] -rw-r--r-- 2 boinc boinc 190618317 Mar  3 01:02 EVNT.48700888._000070.pool.root.1
[2026-03-03 01:58:33] -rw-r--r-- 1 boinc boinc         0 Mar  3 01:02 boinc_lockfile
[2026-03-03 01:58:33] -rw-r--r-- 1 boinc boinc      2508 Mar  3 01:02 pandaJob.out
[2026-03-03 01:58:33] -rw------- 1 boinc boinc    998412 Mar  3 01:03 agis_schedconf.cvmfs.json
[2026-03-03 01:58:33] -rw------- 1 boinc boinc   1512931 Mar  3 01:03 agis_ddmendpoints.agis.ALL.json
[2026-03-03 01:58:33] -rw------- 1 boinc boinc       413 Mar  3 01:03 workernode_map.json
[2026-03-03 01:58:33] drwx------ 5 boinc boinc      4096 Mar  3 01:03 pilot3
[2026-03-03 01:58:33] -rw------- 1 boinc boinc 146127425 Mar  3 01:57 HITS.48700890._001676.pool.root.1
[2026-03-03 01:58:33] -rw-r--r-- 1 boinc boinc       529 Mar  3 01:57 boinc_task_state.xml
[2026-03-03 01:58:33] -rw------- 1 boinc boinc      1021 Mar  3 01:57 memory_monitor_summary.json
[2026-03-03 01:58:33] -rw------- 1 boinc boinc        95 Mar  3 01:57 pilot_heartbeat.json
[2026-03-03 01:58:33] -rw------- 1 boinc boinc    351975 Mar  3 01:57 log.48700890._001676.job.log.tgz.1
[2026-03-03 01:58:33] -rw------- 1 boinc boinc      6284 Mar  3 01:58 heartbeat.json
[2026-03-03 01:58:33] -rw-r--r-- 1 boinc boinc      8192 Mar  3 01:58 boinc_mmap_file
[2026-03-03 01:58:33] -rw-r--r-- 1 boinc boinc        27 Mar  3 01:58 wrapper_checkpoint.txt
[2026-03-03 01:58:33] -rw------- 1 boinc boinc       747 Mar  3 01:58 pilotlog.txt
[2026-03-03 01:58:33] -rw------- 1 boinc boinc    495028 Mar  3 01:58 log.48700890._001676.job.log.1
[2026-03-03 01:58:33] -rw------- 1 boinc boinc       357 Mar  3 01:58 output.list
[2026-03-03 01:58:33] -rw-r--r-- 1 boinc boinc       620 Mar  3 01:58 runtime_log
[2026-03-03 01:58:33] -rw------- 1 boinc boinc    860160 Mar  3 01:58 result.tar.gz
[2026-03-03 01:58:33] -rw-r--r-- 1 boinc boinc      8867 Mar  3 01:58 runtime_log.err
[2026-03-03 01:58:33] -rw------- 1 boinc boinc       637 Mar  3 01:58 hzEMDm6lMH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3IELDmzf2Kzm.diag
[2026-03-03 01:58:33] -rw-r--r-- 1 boinc boinc     21532 Mar  3 01:58 stderr.txt
[2026-03-03 01:58:33] HITS file was successfully produced:
[2026-03-03 01:58:33] -rw------- 1 boinc boinc 146127425 Mar  3 01:57 shared/HITS.pool.root.1
[2026-03-03 01:58:33]  *** Contents of shared directory: ***
[2026-03-03 01:58:33] total 330304
[2026-03-03 01:58:33] -rw-r--r-- 2 boinc boinc     15845 Mar  3 01:02 start_atlas.sh
[2026-03-03 01:58:33] -rw-r--r-- 2 boinc boinc    597930 Mar  3 01:02 input.tar.gz
[2026-03-03 01:58:33] -rw-r--r-- 2 boinc boinc 190618317 Mar  3 01:02 ATLAS.root_0
[2026-03-03 01:58:33] -rw------- 1 boinc boinc 146127425 Mar  3 01:57 HITS.pool.root.1
[2026-03-03 01:58:33] -rw------- 1 boinc boinc    860160 Mar  3 01:58 result.tar.gz
01:58:35 (1489263): run_atlas exited; CPU time 35999.702083
01:58:35 (1489263): called boinc_finish(0)

</stderr_txt>
]]>

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