Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:43:03 (3931294): wrapper (7.7.26015): starting
15:43:03 (3931294): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 15:43:03] Arguments: --nthreads 4
[2026-03-03 15:43:03] Threads: 4
[2026-03-03 15:43:03] Checking for CVMFS
[2026-03-03 15:43:03] No cvmfs_config command found, will try listing directly
[2026-03-03 15:43:03] CVMFS is ok
[2026-03-03 15:43:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 15:43:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 15:43:03] Further information can be found at the LHC@home message board.
[2026-03-03 15:43:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 15:43:03] Checking for apptainer binary...
[2026-03-03 15:43:03] which: no apptainer in ((null))
[2026-03-03 15:43:03] apptainer is not installed, using version from CVMFS
[2026-03-03 15:43:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 15:43:03] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot196/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-03 15:43:03] apptainer works
[2026-03-03 15:43:03] Set ATHENA_PROC_NUMBER=4
[2026-03-03 15:43:03] Set ATHENA_CORE_NUMBER=4
[2026-03-03 15:43:03] Starting ATLAS job with PandaID=7036045470
[2026-03-03 15:43:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot196/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:16:21 (4135734): wrapper (7.7.26015): starting
16:16:21 (4135734): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 16:16:21] Arguments: --nthreads 4
[2026-03-03 16:16:21] Threads: 4
[2026-03-03 16:16:21] This job has been restarted, cleaning up previous attempt
[2026-03-03 16:16:21] Checking for CVMFS
[2026-03-03 16:16:21] No cvmfs_config command found, will try listing directly
[2026-03-03 16:16:21] CVMFS is ok
[2026-03-03 16:16:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 16:16:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 16:16:21] Further information can be found at the LHC@home message board.
[2026-03-03 16:16:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 16:16:21] Checking for apptainer binary...
[2026-03-03 16:16:21] which: no apptainer in ((null))
[2026-03-03 16:16:21] apptainer is not installed, using version from CVMFS
[2026-03-03 16:16:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 16:16:22] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot196/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-03 16:16:22] apptainer works
[2026-03-03 16:16:22] Set ATHENA_PROC_NUMBER=4
[2026-03-03 16:16:22] Set ATHENA_CORE_NUMBER=4
[2026-03-03 16:16:22] Starting ATLAS job with PandaID=7036045470
[2026-03-03 16:16:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot196/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 19:02:00]  *** The last 200 lines of the pilot log: ***
[2026-03-03 19:02:00] 2026-03-03 18:01:10,940 | INFO     | sum of square deviations: 1318277740.5
[2026-03-03 19:02:00] 2026-03-03 18:01:10,940 | INFO     | sum of deviations: 6532442176.0
[2026-03-03 19:02:00] 2026-03-03 18:01:10,940 | INFO     | mean x: 1772555951.5
[2026-03-03 19:02:00] 2026-03-03 18:01:10,940 | INFO     | mean y: 2302898.592592593
[2026-03-03 19:02:00] 2026-03-03 18:01:10,940 | INFO     | intersect: -8781217372.717344
[2026-03-03 19:02:00] 2026-03-03 18:01:10,940 | INFO     | chi2: 1.8944154069682146
[2026-03-03 19:02:00] 2026-03-03 18:01:10,941 | INFO     | sum of square deviations: 1199940638.0
[2026-03-03 19:02:00] 2026-03-03 18:01:10,941 | INFO     | sum of deviations: 16418681066.0
[2026-03-03 19:02:00] 2026-03-03 18:01:10,941 | INFO     | mean x: 1772555799.0
[2026-03-03 19:02:00] 2026-03-03 18:01:10,941 | INFO     | mean y: 2315307.7770700636
[2026-03-03 19:02:00] 2026-03-03 18:01:10,941 | INFO     | intersect: -24251408096.388367
[2026-03-03 19:02:00] 2026-03-03 18:01:10,941 | INFO     | chi2: 1.0681274292550564
[2026-03-03 19:02:00] 2026-03-03 18:01:10,941 | INFO     | current chi2=1.0681274292550564 (change=43.61704273908611 %)
[2026-03-03 19:02:00] 2026-03-03 18:01:10,941 | INFO     | sum of square deviations: 1088905998.0
[2026-03-03 19:02:00] 2026-03-03 18:01:10,942 | INFO     | sum of deviations: 15840981603.0
[2026-03-03 19:02:00] 2026-03-03 18:01:10,942 | INFO     | mean x: 1772555646.5
[2026-03-03 19:02:00] 2026-03-03 18:01:10,942 | INFO     | mean y: 2314514.0657894737
[2026-03-03 19:02:00] 2026-03-03 18:01:10,942 | INFO     | intersect: -25784136692.99265
[2026-03-03 19:02:00] 2026-03-03 18:01:10,942 | INFO     | chi2: 1.0688552173884391
[2026-03-03 19:02:00] 2026-03-03 18:01:10,942 | INFO     | current chi2=1.0688552173884391 (change=-0.06813682651051117 %)
[2026-03-03 19:02:00] 2026-03-03 18:01:10,942 | INFO     | right removable region: 151
[2026-03-03 19:02:00] 2026-03-03 18:01:10,942 | INFO     | sum of square deviations: 1199940638.0
[2026-03-03 19:02:00] 2026-03-03 18:01:10,943 | INFO     | sum of deviations: -8173981273.0
[2026-03-03 19:02:00] 2026-03-03 18:01:10,943 | INFO     | mean x: 1772556104.0
[2026-03-03 19:02:00] 2026-03-03 18:01:10,943 | INFO     | mean y: 2321465.0636942675
[2026-03-03 19:02:00] 2026-03-03 18:01:10,943 | INFO     | intersect: 12076952443.131994
[2026-03-03 19:02:00] 2026-03-03 18:01:10,943 | INFO     | chi2: 0.8483909115987549
[2026-03-03 19:02:00] 2026-03-03 18:01:10,943 | INFO     | current chi2=0.8483909115987549 (change=55.21621559463016 %)
[2026-03-03 19:02:00] 2026-03-03 18:01:10,943 | INFO     | sum of square deviations: 1088905998.0
[2026-03-03 19:02:00] 2026-03-03 18:01:10,943 | INFO     | sum of deviations: -8719950244.0
[2026-03-03 19:02:00] 2026-03-03 18:01:10,943 | INFO     | mean x: 1772556256.5
[2026-03-03 19:02:00] 2026-03-03 18:01:10,944 | INFO     | mean y: 2322213.486842105
[2026-03-03 19:02:00] 2026-03-03 18:01:10,944 | INFO     | intersect: 14196938084.60899
[2026-03-03 19:02:00] 2026-03-03 18:01:10,944 | INFO     | chi2: 0.8479503329287497
[2026-03-03 19:02:00] 2026-03-03 18:01:10,944 | INFO     | current chi2=0.8479503329287497 (change=0.051931092610951225 %)
[2026-03-03 19:02:00] 2026-03-03 18:01:10,944 | INFO     | left removable region: 20
[2026-03-03 19:02:00] 2026-03-03 18:01:10,944 | INFO     | sum of square deviations: 697054930.0
[2026-03-03 19:02:00] 2026-03-03 18:01:10,944 | INFO     | sum of deviations: 393552053.00000006
[2026-03-03 19:02:00] 2026-03-03 18:01:10,944 | INFO     | mean x: 1772556226.0
[2026-03-03 19:02:00] 2026-03-03 18:01:10,944 | INFO     | mean y: 2336908.3740458013
[2026-03-03 19:02:00] 2026-03-03 18:01:10,944 | INFO     | intersect: -998435214.1331891
[2026-03-03 19:02:00] 2026-03-03 18:01:10,944 | INFO     | chi2: 6.289660367190458e-05
[2026-03-03 19:02:00] 2026-03-03 18:01:10,944 | INFO     | current memory leak: 0.56 B/s (using 131 data points, chi2=0.00)
[2026-03-03 19:02:00] 2026-03-03 18:01:10,945 | INFO     | could have reported an average CPU frequency of 3634 MHz (9 samples)
[2026-03-03 19:02:00] 2026-03-03 18:01:10,945 | INFO     | ..............................
[2026-03-03 19:02:00] 2026-03-03 18:01:10,945 | INFO     | . Timing measurements:
[2026-03-03 19:02:00] 2026-03-03 18:01:10,945 | INFO     | . get job = 0 s
[2026-03-03 19:02:00] 2026-03-03 18:01:10,945 | INFO     | . initial setup = 0 s
[2026-03-03 19:02:00] 2026-03-03 18:01:10,945 | INFO     | . payload setup = 10 s
[2026-03-03 19:02:00] 2026-03-03 18:01:10,945 | INFO     | . stage-in = 0 s
[2026-03-03 19:02:00] 2026-03-03 18:01:10,945 | INFO     | . payload execution = 9845 s
[2026-03-03 19:02:00] 2026-03-03 18:01:10,945 | INFO     | . stage-out = 0 s
[2026-03-03 19:02:00] 2026-03-03 18:01:10,945 | INFO     | . log creation = 0 s
[2026-03-03 19:02:00] 2026-03-03 18:01:10,945 | INFO     | ..............................
[2026-03-03 19:02:00] 2026-03-03 18:01:11,018 | INFO     | time since job start (9874s) is within the limit (349056.0s)
[2026-03-03 19:02:00] 2026-03-03 18:01:11,019 | INFO     | 9874s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | 
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | job summary report
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | --------------------------------------------------
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | PanDA job id: 7036045470
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | task id: 48848086
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | errors: (none)
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | pilot state: finished 
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | transexitcode: 0
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | exeerrorcode: 0
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | exeerrordiag: 
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | exitcode: 0
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | exitmsg: OK
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | cpuconsumptiontime: 35978 s
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | nevents: 400
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | neventsw: 0
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | pid: 455768
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | pgrp: 455768
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | corecount: 4
[2026-03-03 19:02:00] 2026-03-03 18:01:11,101 | INFO     | event service: False
[2026-03-03 19:02:00] 2026-03-03 18:01:11,102 | INFO     | sizes: {0: 2286772, 1: 2287176, 11: 2287176, 9860: 2315997, 9861: 2325019, 9863: 2325461}
[2026-03-03 19:02:00] 2026-03-03 18:01:11,102 | INFO     | --------------------------------------------------
[2026-03-03 19:02:00] 2026-03-03 18:01:11,102 | INFO     | 
[2026-03-03 19:02:00] 2026-03-03 18:01:11,102 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot196/slots/0
[2026-03-03 19:02:00] 2026-03-03 18:01:11,120 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,120 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,120 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,120 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,120 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,120 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,120 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,121 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,121 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 19:02:00] 2026-03-03 18:01:11,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,121 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 19:02:00] 2026-03-03 18:01:11,121 | INFO     | job 7036045470 has completed (purged errors)
[2026-03-03 19:02:00] 2026-03-03 18:01:11,121 | INFO     | overall cleanup function is called
[2026-03-03 19:02:00] 2026-03-03 18:01:12,128 | INFO     | --- collectZombieJob: --- 10, [455768]
[2026-03-03 19:02:00] 2026-03-03 18:01:12,129 | INFO     | zombie collector waiting for pid 455768
[2026-03-03 19:02:00] 2026-03-03 18:01:12,129 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 19:02:00] 2026-03-03 18:01:12,129 | INFO     | collected zombie processes
[2026-03-03 19:02:00] 2026-03-03 18:01:12,129 | INFO     | will attempt to kill all subprocesses of pid=455768
[2026-03-03 19:02:00] 2026-03-03 18:01:14,635 | INFO     | PID=238062 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 19:02:00] 2026-03-03 18:01:14,635 | INFO     | .. there are 57 such processes running
[2026-03-03 19:02:00] 2026-03-03 18:01:14,907 | INFO     | process IDs to be killed: [455768] (in reverse order)
[2026-03-03 19:02:00] 2026-03-03 18:01:14,939 | WARNING  | process 455768 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 19:02:00] 2026-03-03 18:01:15,125 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 19:02:00] 2026-03-03 18:01:15,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 19:02:00] 2026-03-03 18:01:15,192 | INFO     | did not find any defunct processes belonging to 455768
[2026-03-03 19:02:00] 2026-03-03 18:01:15,258 | INFO     | did not find any defunct processes belonging to 455768
[2026-03-03 19:02:00] 2026-03-03 18:01:15,258 | INFO     | ready for new job
[2026-03-03 19:02:00] 2026-03-03 18:01:15,258 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 19:02:00] 2026-03-03 18:01:15,260 | INFO     | **************************************
[2026-03-03 19:02:00] 2026-03-03 18:01:15,260 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 19:02:00] 2026-03-03 18:01:15,260 | INFO     | **************************************
[2026-03-03 19:02:00] 2026-03-03 18:01:15,260 | INFO     | 
[2026-03-03 19:02:00] 2026-03-03 18:01:15,272 | INFO     | architecture information:
[2026-03-03 19:02:00] 2026-03-03 18:01:15,272 | INFO     | executing command: cat /etc/os-release
[2026-03-03 19:02:00] 2026-03-03 18:01:15,287 | INFO     | cat /etc/os-release:
[2026-03-03 19:02:00] NAME="CentOS Linux"
[2026-03-03 19:02:00] VERSION="7 (Core)"
[2026-03-03 19:02:00] ID="centos"
[2026-03-03 19:02:00] ID_LIKE="rhel fedora"
[2026-03-03 19:02:00] VERSION_ID="7"
[2026-03-03 19:02:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 19:02:00] ANSI_COLOR="0;31"
[2026-03-03 19:02:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 19:02:00] HOME_URL="https://www.centos.org/"
[2026-03-03 19:02:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 19:02:00] 
[2026-03-03 19:02:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 19:02:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 19:02:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 19:02:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 19:02:00] 
[2026-03-03 19:02:00] 2026-03-03 18:01:15,288 | INFO     | **************************************
[2026-03-03 19:02:00] 2026-03-03 18:01:15,347 | INFO     | using path: /var/lib/boinc/var/slot196/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 19:02:00] 2026-03-03 18:01:15,775 | INFO     | number of running child processes to parent process 455768: 1
[2026-03-03 19:02:00] 2026-03-03 18:01:15,775 | INFO     | maximum number of monitored processes: 6
[2026-03-03 19:02:00] 2026-03-03 18:01:15,775 | INFO     | aborting job monitoring since job object (job id=7036045470) has expired
[2026-03-03 19:02:00] 2026-03-03 18:01:15,791 | INFO     | executing command: df -mP /var/lib/boinc/var/slot196/slots/0
[2026-03-03 19:02:00] 2026-03-03 18:01:15,805 | INFO     | sufficient remaining disk space (22523412480 B)
[2026-03-03 19:02:00] 2026-03-03 18:01:15,805 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 19:02:00] 2026-03-03 18:01:15,805 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 19:02:00] 2026-03-03 18:01:15,805 | INFO     | update_server=False
[2026-03-03 19:02:00] 2026-03-03 18:01:15,805 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 19:02:00] 2026-03-03 18:01:15,805 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 19:02:00] 2026-03-03 18:01:15,806 | INFO     | will abort loop
[2026-03-03 19:02:00] 2026-03-03 18:01:16,003 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 19:02:00] 2026-03-03 18:01:16,222 | INFO     | all data control threads have been joined
[2026-03-03 19:02:00] 2026-03-03 18:01:16,398 | INFO     | all payload control threads have been joined
[2026-03-03 19:02:00] 2026-03-03 18:01:16,810 | INFO     | [job] retrieve thread has finished
[2026-03-03 19:02:00] 2026-03-03 18:01:16,811 | INFO     | [job] job monitor thread has finished
[2026-03-03 19:02:00] 2026-03-03 18:01:16,922 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 19:02:00] 2026-03-03 18:01:16,988 | INFO     | all job control threads have been joined
[2026-03-03 19:02:00] 2026-03-03 18:01:17,004 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 19:02:00] 2026-03-03 18:01:17,008 | INFO     | [job] queue monitor thread has finished
[2026-03-03 19:02:00] 2026-03-03 18:01:17,130 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 19:02:00] 2026-03-03 18:01:17,151 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 19:02:00] 2026-03-03 18:01:17,183 | INFO     | [payload] validate_post thread has finished
[2026-03-03 19:02:00] 2026-03-03 18:01:17,227 | INFO     | [data] control thread has finished
[2026-03-03 19:02:00] 2026-03-03 18:01:17,403 | INFO     | [payload] control thread has finished
[2026-03-03 19:02:00] 2026-03-03 18:01:17,945 | INFO     | [payload] failed_post thread has finished
[2026-03-03 19:02:00] 2026-03-03 18:01:17,993 | INFO     | [job] control thread has finished
[2026-03-03 19:02:00] 2026-03-03 18:01:18,124 | INFO     | [job] validate thread has finished
[2026-03-03 19:02:00] 2026-03-03 18:01:18,134 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 19:02:00] 2026-03-03 18:01:18,269 | INFO     | [data] copytool_in thread has finished
[2026-03-03 19:02:00] 2026-03-03 18:01:19,156 | INFO     | [data] copytool_out thread has finished
[2026-03-03 19:02:00] 2026-03-03 18:01:20,929 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 19:02:00] 2026-03-03 18:01:26,113 | INFO     | job.realtimelogging is not enabled
[2026-03-03 19:02:00] 2026-03-03 18:01:27,118 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 19:02:00] 2026-03-03 18:01:36,770 [wrapper] supervise_pilot (15 min periods counter: 12)
[2026-03-03 19:02:00] 2026-03-03 18:01:47,205 | INFO     | PID=238062 has CPU usage=12.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 19:02:00] 2026-03-03 18:01:47,208 | INFO     | .. there are 57 such processes running
[2026-03-03 19:02:00] 2026-03-03 18:01:47,209 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 19:02:00] 2026-03-03 18:01:47,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 19:02:00] 2026-03-03 18:01:47,209 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 19:02:00] 2026-03-03 18:01:53,674 | INFO     | [monitor] cgroup control has ended
[2026-03-03 19:02:00] 2026-03-03 18:01:55,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22541326468928)>', '<ExcThread(monitor, started 22541090694912)>']
[2026-03-03 19:02:00] 2026-03-03 18:01:56,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 19:02:00] 2026-03-03 18:01:56,255 | INFO     | [monitor] control thread has ended
[2026-03-03 19:02:00] 2026-03-03 18:02:00,459 | INFO     | all workflow threads have been joined
[2026-03-03 19:02:00] 2026-03-03 18:02:00,459 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 19:02:00] 2026-03-03 18:02:00,459 | INFO     | traces error code: 0
[2026-03-03 19:02:00] 2026-03-03 18:02:00,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 19:02:00] 2026-03-03 18:02:00,582 [wrapper] ==== pilot stdout END ====
[2026-03-03 19:02:00] 2026-03-03 18:02:00,584 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 19:02:00] 2026-03-03 18:02:00,585 [wrapper] pilotpid: 238062
[2026-03-03 19:02:00] 2026-03-03 18:02:00,587 [wrapper] Pilot exit status: 0
[2026-03-03 19:02:00] 2026-03-03 18:02:00,594 [wrapper] pandaids: 7036045470 7036045470
[2026-03-03 19:02:00] 2026-03-03 18:02:00,706 [wrapper] cleanup supervisor_pilot 2141373 238066
[2026-03-03 19:02:00] 2026-03-03 18:02:00,709 [wrapper] Test setup, not cleaning
[2026-03-03 19:02:00] 2026-03-03 18:02:00,711 [wrapper] apfmon messages muted
[2026-03-03 19:02:00] 2026-03-03 18:02:00,714 [wrapper] ==== wrapper stdout END ====
[2026-03-03 19:02:00] 2026-03-03 18:02:00,716 [wrapper] ==== wrapper stderr END ====
[2026-03-03 19:02:00]  *** Error codes and diagnostics ***
[2026-03-03 19:02:00]     "exeErrorCode": 0,
[2026-03-03 19:02:00]     "exeErrorDiag": "",
[2026-03-03 19:02:00]     "pilotErrorCode": 0,
[2026-03-03 19:02:00]     "pilotErrorDiag": "",
[2026-03-03 19:02:00]  *** Listing of results directory ***
[2026-03-03 19:02:00] total 653448
[2026-03-03 19:02:00] drwx------. 5 boinc boinc      4096 Feb  2 16:00 pilot3
[2026-03-03 19:02:00] -rw-r--r--. 1 boinc boinc    584627 Mar  2 18:50 pilot3.tar.gz
[2026-03-03 19:02:00] -rwx------. 1 boinc boinc     36322 Mar  2 18:51 runpilot2-wrapper.sh
[2026-03-03 19:02:00] -rw-r--r--. 1 boinc boinc      5111 Mar  2 18:51 queuedata.json
[2026-03-03 19:02:00] -rw-r--r--. 1 boinc boinc       100 Mar  3 15:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 19:02:00] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 15:42 run_atlas
[2026-03-03 19:02:00] -rw-r--r--. 1 boinc boinc       105 Mar  3 15:42 job.xml
[2026-03-03 19:02:00] -rw-r--r--. 3 boinc boinc 229819431 Mar  3 15:43 EVNT.48455141._000003.pool.root.1
[2026-03-03 19:02:00] -rw-r--r--. 3 boinc boinc 229819431 Mar  3 15:43 ATLAS.root_0
[2026-03-03 19:02:00] -rw-r--r--. 2 boinc boinc     15845 Mar  3 15:43 start_atlas.sh
[2026-03-03 19:02:00] drwxrwx--x. 2 boinc boinc      4096 Mar  3 15:43 shared
[2026-03-03 19:02:00] -rw-r--r--. 2 boinc boinc    597958 Mar  3 15:43 input.tar.gz
[2026-03-03 19:02:00] -rw-r--r--. 1 boinc boinc         0 Mar  3 15:43 boinc_lockfile
[2026-03-03 19:02:00] -rw-r--r--. 1 boinc boinc      2611 Mar  3 16:16 pandaJob.out
[2026-03-03 19:02:00] -rw-------. 1 boinc boinc    998508 Mar  3 16:16 agis_schedconf.cvmfs.json
[2026-03-03 19:02:00] -rw-------. 1 boinc boinc       445 Mar  3 16:16 workernode_map.json
[2026-03-03 19:02:00] -rw-r--r--. 1 boinc boinc      6715 Mar  3 16:43 init_data.xml
[2026-03-03 19:02:00] -rw-r--r--. 1 boinc boinc       530 Mar  3 19:00 boinc_task_state.xml
[2026-03-03 19:02:00] -rw-------. 1 boinc boinc 202102444 Mar  3 19:00 HITS.48848086._000061.pool.root.1
[2026-03-03 19:02:00] -rw-------. 1 boinc boinc      1031 Mar  3 19:01 memory_monitor_summary.json
[2026-03-03 19:02:00] -rw-------. 1 boinc boinc   1516092 Mar  3 19:01 agis_ddmendpoints.agis.ALL.json
[2026-03-03 19:02:00] -rw-------. 1 boinc boinc    335712 Mar  3 19:01 log.48848086._000061.job.log.tgz.1
[2026-03-03 19:02:00] -rw-------. 1 boinc boinc      6341 Mar  3 19:01 heartbeat.json
[2026-03-03 19:02:00] -rw-------. 1 boinc boinc        96 Mar  3 19:01 pilot_heartbeat.json
[2026-03-03 19:02:00] -rw-r--r--. 1 boinc boinc        28 Mar  3 19:01 wrapper_checkpoint.txt
[2026-03-03 19:02:00] -rw-r--r--. 1 boinc boinc      8192 Mar  3 19:01 boinc_mmap_file
[2026-03-03 19:02:00] -rw-------. 1 boinc boinc      5320 Mar  3 19:02 pilotlog.txt
[2026-03-03 19:02:00] -rw-------. 1 boinc boinc   1390026 Mar  3 19:02 log.48848086._000061.job.log.1
[2026-03-03 19:02:00] -rw-------. 1 boinc boinc       357 Mar  3 19:02 output.list
[2026-03-03 19:02:00] -rw-r--r--. 1 boinc boinc       620 Mar  3 19:02 runtime_log
[2026-03-03 19:02:00] -rw-------. 1 boinc boinc   1740800 Mar  3 19:02 result.tar.gz
[2026-03-03 19:02:00] -rw-r--r--. 1 boinc boinc      9298 Mar  3 19:02 runtime_log.err
[2026-03-03 19:02:00] -rw-------. 1 boinc boinc       788 Mar  3 19:02 RrzKDmYbMH9n9Rq4apOajLDm4fhM0noT9bVooX4SDm85BLDmCkXuam.diag
[2026-03-03 19:02:00] -rw-r--r--. 1 boinc boinc     22932 Mar  3 19:02 stderr.txt
[2026-03-03 19:02:00] HITS file was successfully produced:
[2026-03-03 19:02:00] -rw-------. 1 boinc boinc 202102444 Mar  3 19:00 shared/HITS.pool.root.1
[2026-03-03 19:02:00]  *** Contents of shared directory: ***
[2026-03-03 19:02:00] total 424112
[2026-03-03 19:02:00] -rw-r--r--. 3 boinc boinc 229819431 Mar  3 15:43 ATLAS.root_0
[2026-03-03 19:02:00] -rw-r--r--. 2 boinc boinc     15845 Mar  3 15:43 start_atlas.sh
[2026-03-03 19:02:00] -rw-r--r--. 2 boinc boinc    597958 Mar  3 15:43 input.tar.gz
[2026-03-03 19:02:00] -rw-------. 1 boinc boinc 202102444 Mar  3 19:00 HITS.pool.root.1
[2026-03-03 19:02:00] -rw-------. 1 boinc boinc   1740800 Mar  3 19:02 result.tar.gz
19:02:02 (4135734): run_atlas exited; CPU time 36372.296965
19:02:02 (4135734): called boinc_finish(0)

</stderr_txt>
]]>

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