Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:35:14 (1655580): wrapper (7.7.26015): starting
16:35:14 (1655580): wrapper: running run_atlas (--nthreads 12)
[2026-03-02 16:35:14] Arguments: --nthreads 12
[2026-03-02 16:35:14] Threads: 12
[2026-03-02 16:35:14] Checking for CVMFS
[2026-03-02 16:35:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 16:35:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 16:35:14] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 16:35:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 16:35:14] 2.11.5.0 3841276 132142 344184 156826 0 372 24395363 45568001 15734 130560 0 1222470934 99.822 636213418 20121 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-02 16:35:14] CVMFS is ok
[2026-03-02 16:35:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 16:35:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 16:35:14] Further information can be found at the LHC@home message board.
[2026-03-02 16:35:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 16:35:14] Checking for apptainer binary...
[2026-03-02 16:35:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 16:35:14] Running /usr/bin/apptainer --version
[2026-03-02 16:35:14] apptainer version 1.4.1-1.el9
[2026-03-02 16:35:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 16:35:14] wns0064.triumf.lcg
[2026-03-02 16:35:14] apptainer works
[2026-03-02 16:35:14] Set ATHENA_PROC_NUMBER=12
[2026-03-02 16:35:14] Set ATHENA_CORE_NUMBER=12
[2026-03-02 16:35:15] Starting ATLAS job with PandaID=7036120248
[2026-03-02 16:35:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 16:38:48]  *** The last 200 lines of the pilot log: ***
[2026-03-02 16:38:48] 2026-03-03 00:38:14,766 | WARNING  | wrong length of table data, x=[1772498161.0], y=[1873.0] (must be same and length>=4)
[2026-03-02 16:38:48] 2026-03-03 00:38:14,766 | INFO     | could have reported an average CPU frequency of 2623 MHz (4 samples)
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | ..............................
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . Timing measurements:
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . get job = 0 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . initial setup = 7 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . payload setup = 8 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . stage-in = 0 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . payload execution = 23 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . stage-out = 0 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . log creation = 0 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | ..............................
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036120248/pilotlog.txt
[2026-03-02 16:38:48] 2026-03-03 00:38:14,861 | INFO     | monitor loop #56: job 0:7036120248 is in state 'failed'
[2026-03-02 16:38:48] 2026-03-03 00:38:14,861 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-02 16:38:48] 2026-03-03 00:38:15,046 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-02 16:38:48] - Log from pilotlog.txt -
[2026-03-02 16:38:48] 2026-03-03 00:38:14,766 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 16:38:48] 2026-03-03 00:38:14,766 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 16:38:48] 2026-03-03 00:38:14,766 | WARNING  | found no stored workdir sizes
[2026-03-02 16:38:48] 2026-03-03 00:38:14,766 | INFO     | will not add max space = 0 B to job metrics
[2026-03-02 16:38:48] 2026-03-03 00:38:14,766 | WARNING  | wrong length of table data, x=[1772498161.0], y=[1873.0] (must be same and length>=4)
[2026-03-02 16:38:48] 2026-03-03 00:38:14,766 | INFO     | could have reported an average CPU frequency of 2623 MHz (4 samples)
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | ..............................
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . Timing measurements:
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . get job = 0 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . initial setup = 7 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . payload setup = 8 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . stage-in = 0 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . payload execution = 23 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . stage-out = 0 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . log creation = 0 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | ..............................
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036120248/pilotlog.txt
[2026-03-02 16:38:48] 2026-03-03 00:38:14,861 | INFO     | monitor loop #56: job 0:7036120248 is in state 'failed'
[2026-03-02 16:38:48] 2026-03-03 00:38:14,861 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-02 16:38:48] 2026-03-03 00:38:15,046 | WARNING  | 
[2026-03-02 16:38:48] [begin log extracts]
[2026-03-02 16:38:48] - Log from pilotlog.txt -
[2026-03-02 16:38:48] 2026-03-03 00:38:14,766 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 16:38:48] 2026-03-03 00:38:14,766 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 16:38:48] 2026-03-03 00:38:14,766 | WARNING  | found no stored workdir sizes
[2026-03-02 16:38:48] 2026-03-03 00:38:14,766 | INFO     | will not add max space = 0 B to job metrics
[2026-03-02 16:38:48] 2026-03-03 00:38:14,766 | WARNING  | wrong length of table data, x=[1772498161.0], y=[1873.0] (must be same and length>=4)
[2026-03-02 16:38:48] 2026-03-03 00:38:14,766 | INFO     | could have reported an average CPU frequency of 2623 MHz (4 samples)
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | ..............................
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . Timing measurements:
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . get job = 0 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . initial setup = 7 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . payload setup = 8 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . stage-in = 0 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . payload execution = 23 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . stage-out = 0 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | . log creation = 0 s
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | ..............................
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 16:38:48] 2026-03-03 00:38:14,767 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036120248/pilotlog.txt
[2026-03-02 16:38:48] 2026-03-03 00:38:14,861 | INFO     | monitor loop #56: job 0:7036120248 is in state 'failed'
[2026-03-02 16:38:48] 2026-03-03 00:38:14,861 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-02 16:38:48] [end log extracts]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,046 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-02 16:38:48] 2026-03-03 00:38:15,047 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-02 16:38:48] 2026-03-03 00:38:15,103 | INFO     | time since job start (163s) is within the limit (349056.0s)
[2026-03-02 16:38:48] 2026-03-03 00:38:15,148 | INFO     | 
[2026-03-02 16:38:48] 2026-03-03 00:38:15,148 | INFO     | job summary report
[2026-03-02 16:38:48] 2026-03-03 00:38:15,148 | INFO     | --------------------------------------------------
[2026-03-02 16:38:48] 2026-03-03 00:38:15,148 | INFO     | PanDA job id: 7036120248
[2026-03-02 16:38:48] 2026-03-03 00:38:15,148 | INFO     | task id: 48848474
[2026-03-02 16:38:48] 2026-03-03 00:38:15,148 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-02 16:36:11,375 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-02 16:38:48] 2026-03-03 00:38:15,148 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 16:38:48] 2026-03-03 00:38:15,149 | INFO     | pilot state: failed 
[2026-03-02 16:38:48] 2026-03-03 00:38:15,149 | INFO     | transexitcode: 65
[2026-03-02 16:38:48] 2026-03-03 00:38:15,149 | INFO     | exeerrorcode: 65
[2026-03-02 16:38:48] 2026-03-03 00:38:15,149 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-02 16:38:48] 2026-03-03 00:38:15,149 | INFO     | exitcode: 65
[2026-03-02 16:38:48] 2026-03-03 00:38:15,149 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-02 16:38:48] 2026-03-03 00:38:15,149 | INFO     | cpuconsumptiontime: 13 s
[2026-03-02 16:38:48] 2026-03-03 00:38:15,149 | INFO     | nevents: 0
[2026-03-02 16:38:48] 2026-03-03 00:38:15,149 | INFO     | neventsw: 0
[2026-03-02 16:38:48] 2026-03-03 00:38:15,149 | INFO     | pid: 1664376
[2026-03-02 16:38:48] 2026-03-03 00:38:15,149 | INFO     | pgrp: 1664376
[2026-03-02 16:38:48] 2026-03-03 00:38:15,149 | INFO     | corecount: 12
[2026-03-02 16:38:48] 2026-03-03 00:38:15,149 | INFO     | event service: False
[2026-03-02 16:38:48] 2026-03-03 00:38:15,149 | INFO     | sizes: {0: 2282106, 1: 2282340, 11: 2282340, 36: 2309811, 152: 2309949}
[2026-03-02 16:38:48] 2026-03-03 00:38:15,149 | INFO     | --------------------------------------------------
[2026-03-02 16:38:48] 2026-03-03 00:38:15,149 | INFO     | 
[2026-03-02 16:38:48] 2026-03-03 00:38:15,149 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-02 16:38:48] 2026-03-03 00:38:15,470 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,470 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,470 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 16:38:48] 2026-03-03 00:38:15,471 | INFO     | job 7036120248 has completed (purged errors)
[2026-03-02 16:38:48] 2026-03-03 00:38:15,472 | INFO     | overall cleanup function is called
[2026-03-02 16:38:48] 2026-03-03 00:38:16,479 | INFO     | --- collectZombieJob: --- 10, [1664376]
[2026-03-02 16:38:48] 2026-03-03 00:38:16,479 | INFO     | zombie collector waiting for pid 1664376
[2026-03-02 16:38:48] 2026-03-03 00:38:16,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 16:38:48] 2026-03-03 00:38:16,480 | INFO     | collected zombie processes
[2026-03-02 16:38:48] 2026-03-03 00:38:16,480 | INFO     | will attempt to kill all subprocesses of pid=1664376
[2026-03-02 16:38:48] 2026-03-03 00:38:16,801 | INFO     | process IDs to be killed: [1664376] (in reverse order)
[2026-03-02 16:38:48] 2026-03-03 00:38:16,876 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 16:38:48] 2026-03-03 00:38:16,881 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 16:38:48] 2026-03-03 00:38:16,899 | INFO     | did not find any defunct processes belonging to 1664376
[2026-03-02 16:38:48] 2026-03-03 00:38:16,908 | INFO     | did not find any defunct processes belonging to 1664376
[2026-03-02 16:38:48] 2026-03-03 00:38:16,909 | INFO     | ready for new job
[2026-03-02 16:38:48] 2026-03-03 00:38:16,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 16:38:48] 2026-03-03 00:38:16,910 | INFO     | **************************************
[2026-03-02 16:38:48] 2026-03-03 00:38:16,911 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 16:38:48] 2026-03-03 00:38:16,911 | INFO     | **************************************
[2026-03-02 16:38:48] 2026-03-03 00:38:16,911 | INFO     | 
[2026-03-02 16:38:48] 2026-03-03 00:38:16,912 | INFO     | architecture information:
[2026-03-02 16:38:48] 2026-03-03 00:38:16,923 | INFO     | executing command: cat /etc/os-release
[2026-03-02 16:38:48] 2026-03-03 00:38:17,033 | INFO     | cat /etc/os-release:
[2026-03-02 16:38:48] NAME="CentOS Linux"
[2026-03-02 16:38:48] VERSION="7 (Core)"
[2026-03-02 16:38:48] ID="centos"
[2026-03-02 16:38:48] ID_LIKE="rhel fedora"
[2026-03-02 16:38:48] VERSION_ID="7"
[2026-03-02 16:38:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 16:38:48] ANSI_COLOR="0;31"
[2026-03-02 16:38:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 16:38:48] HOME_URL="https://www.centos.org/"
[2026-03-02 16:38:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 16:38:48] 
[2026-03-02 16:38:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 16:38:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 16:38:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 16:38:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 16:38:48] 
[2026-03-02 16:38:48] 2026-03-03 00:38:17,033 | INFO     | **************************************
[2026-03-02 16:38:48] 2026-03-03 00:38:17,546 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-02 16:38:48] 2026-03-03 00:38:17,585 | INFO     | sufficient remaining disk space (1821386997760 B)
[2026-03-02 16:38:48] 2026-03-03 00:38:17,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 16:38:48] 2026-03-03 00:38:17,585 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 16:38:48] 2026-03-03 00:38:17,585 | INFO     | update_server=False
[2026-03-02 16:38:48] 2026-03-03 00:38:17,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 16:38:48] 2026-03-03 00:38:17,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 16:38:48] 2026-03-03 00:38:17,896 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 16:38:48] 2026-03-03 00:38:18,312 | INFO     | all data control threads have been joined
[2026-03-02 16:38:48] 2026-03-03 00:38:18,372 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 16:38:48] 2026-03-03 00:38:18,372 | INFO     | aborting loop
[2026-03-02 16:38:48] 2026-03-03 00:38:18,476 | INFO     | all job control threads have been joined
[2026-03-02 16:38:48] 2026-03-03 00:38:18,603 | INFO     | [job] retrieve thread has finished
[2026-03-02 16:38:48] 2026-03-03 00:38:18,617 | INFO     | all payload control threads have been joined
[2026-03-02 16:38:48] 2026-03-03 00:38:18,625 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 16:38:48] 2026-03-03 00:38:18,694 | INFO     | [payload] failed_post thread has finished
[2026-03-02 16:38:48] 2026-03-03 00:38:18,803 | INFO     | [job] validate thread has finished
[2026-03-02 16:38:48] 2026-03-03 00:38:18,847 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 16:38:48] 2026-03-03 00:38:18,896 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 16:38:48] 2026-03-03 00:38:19,218 | INFO     | [data] copytool_in thread has finished
[2026-03-02 16:38:48] 2026-03-03 00:38:19,318 | INFO     | [data] control thread has finished
[2026-03-02 16:38:48] 2026-03-03 00:38:19,377 | INFO     | [job] job monitor thread has finished
[2026-03-02 16:38:48] 2026-03-03 00:38:19,481 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 16:38:48] 2026-03-03 00:38:19,481 | INFO     | [job] control thread has finished
[2026-03-02 16:38:48] 2026-03-03 00:38:19,593 | INFO     | [data] copytool_out thread has finished
[2026-03-02 16:38:48] 2026-03-03 00:38:19,603 | INFO     | [payload] validate_post thread has finished
[2026-03-02 16:38:48] 2026-03-03 00:38:19,623 | INFO     | [payload] control thread has finished
[2026-03-02 16:38:48] 2026-03-03 00:38:20,162 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 16:38:48] 2026-03-03 00:38:21,168 | INFO     | [job] queue monitor thread has finished
[2026-03-02 16:38:48] 2026-03-03 00:38:21,903 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 16:38:48] 2026-03-03 00:38:31,752 | INFO     | [monitor] cgroup control has ended
[2026-03-02 16:38:48] 2026-03-03 00:38:32,584 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140412460885824)>', '<ExcThread(monitor, started 140411934861056)>']
[2026-03-02 16:38:48] 2026-03-03 00:38:37,609 | INFO     | all workflow threads have been joined
[2026-03-02 16:38:48] 2026-03-03 00:38:37,610 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 16:38:48] 2026-03-03 00:38:37,610 | INFO     | traces error code: 0
[2026-03-02 16:38:48] 2026-03-03 00:38:37,610 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 16:38:48] 2026-03-03 00:38:48,369 | INFO     | PID=1659385 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 16:38:48] 2026-03-03 00:38:48,370 | INFO     | .. there are 21 such processes running
[2026-03-02 16:38:48] 2026-03-03 00:38:48,370 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 16:38:48] 2026-03-03 00:38:48,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 16:38:48] 2026-03-03 00:38:48,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 16:38:48] 2026-03-03 00:38:48,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 16:38:48] 2026-03-03 00:38:48,370 | INFO     | [monitor] control thread has ended
[2026-03-02 16:38:48] 2026-03-03 00:38:48,489 [wrapper] ==== pilot stdout END ====
[2026-03-02 16:38:48] 2026-03-03 00:38:48,492 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 16:38:48] 2026-03-03 00:38:48,494 [wrapper] pilotpid: 1659385
[2026-03-02 16:38:48] 2026-03-03 00:38:48,496 [wrapper] Pilot exit status: 0
[2026-03-02 16:38:48] 2026-03-03 00:38:48,504 [wrapper] pandaids: 7036120248
[2026-03-02 16:38:48] 2026-03-03 00:38:48,543 [wrapper] cleanup supervisor_pilot 1659392 1659386
[2026-03-02 16:38:48] 2026-03-03 00:38:48,545 [wrapper] Test setup, not cleaning
[2026-03-02 16:38:48] 2026-03-03 00:38:48,547 [wrapper] apfmon messages muted
[2026-03-02 16:38:48] 2026-03-03 00:38:48,549 [wrapper] ==== wrapper stdout END ====
[2026-03-02 16:38:48] 2026-03-03 00:38:48,551 [wrapper] ==== wrapper stderr END ====
[2026-03-02 16:38:48]  *** Error codes and diagnostics ***
[2026-03-02 16:38:48]     "exeErrorCode": 65,
[2026-03-02 16:38:48]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-02 16:38:48]     "pilotErrorCode": 1305,
[2026-03-02 16:38:48]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-02 16:38:48]  *** Listing of results directory ***
[2026-03-02 16:38:48] total 264776
[2026-03-02 16:38:48] -rw-r--r--. 1 boinc boinc    584627 Mar  2 11:44 pilot3.tar.gz
[2026-03-02 16:38:48] -rwx------. 1 boinc boinc     36322 Mar  2 11:59 runpilot2-wrapper.sh
[2026-03-02 16:38:48] -rw-r--r--. 1 boinc boinc      5111 Mar  2 12:00 queuedata.json
[2026-03-02 16:38:48] -rw-r--r--. 1 boinc boinc       100 Mar  2 16:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 16:38:48] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 16:35 run_atlas
[2026-03-02 16:38:48] -rw-r--r--. 1 boinc boinc       105 Mar  2 16:35 job.xml
[2026-03-02 16:38:48] -rw-r--r--. 1 boinc boinc      6594 Mar  2 16:35 init_data.xml
[2026-03-02 16:38:48] -rw-r--r--. 2 boinc boinc 267007392 Mar  2 16:35 EVNT.48455658._000003.pool.root.1
[2026-03-02 16:38:48] -rw-r--r--. 2 boinc boinc     15845 Mar  2 16:35 start_atlas.sh
[2026-03-02 16:38:48] drwxrwx--x. 2 boinc boinc      4096 Mar  2 16:35 shared
[2026-03-02 16:38:48] -rw-r--r--. 2 boinc boinc    597954 Mar  2 16:35 input.tar.gz
[2026-03-02 16:38:48] -rw-r--r--. 1 boinc boinc         0 Mar  2 16:35 boinc_lockfile
[2026-03-02 16:38:48] -rw-r--r--. 1 boinc boinc      2589 Mar  2 16:35 pandaJob.out
[2026-03-02 16:38:48] -rw-------. 1 boinc boinc    997714 Mar  2 16:35 agis_schedconf.cvmfs.json
[2026-03-02 16:38:48] -rw-------. 1 boinc boinc   1512931 Mar  2 16:35 agis_ddmendpoints.agis.ALL.json
[2026-03-02 16:38:48] -rw-------. 1 boinc boinc       444 Mar  2 16:35 workernode_map.json
[2026-03-02 16:38:48] drwx------. 5 boinc boinc      4096 Mar  2 16:35 pilot3
[2026-03-02 16:38:48] -rw-r--r--. 1 boinc boinc       522 Mar  2 16:36 boinc_task_state.xml
[2026-03-02 16:38:48] -rw-------. 1 boinc boinc       962 Mar  2 16:36 memory_monitor_summary.json
[2026-03-02 16:38:48] -rw-------. 1 boinc boinc     21244 Mar  2 16:36 log.48848474._000071.job.log.tgz.1
[2026-03-02 16:38:48] -rw-------. 1 boinc boinc      6995 Mar  2 16:38 heartbeat.json
[2026-03-02 16:38:48] -rw-r--r--. 1 boinc boinc      8192 Mar  2 16:38 boinc_mmap_file
[2026-03-02 16:38:48] -rw-r--r--. 1 boinc boinc        22 Mar  2 16:38 wrapper_checkpoint.txt
[2026-03-02 16:38:48] -rw-------. 1 boinc boinc       823 Mar  2 16:38 pilotlog.txt
[2026-03-02 16:38:48] -rw-------. 1 boinc boinc        95 Mar  2 16:38 pilot_heartbeat.json
[2026-03-02 16:38:48] -rw-------. 1 boinc boinc     81259 Mar  2 16:38 log.48848474._000071.job.log.1
[2026-03-02 16:38:48] -rw-------. 1 boinc boinc       188 Mar  2 16:38 output.list
[2026-03-02 16:38:48] -rw-r--r--. 1 boinc boinc       620 Mar  2 16:38 runtime_log
[2026-03-02 16:38:48] -rw-------. 1 boinc boinc    122880 Mar  2 16:38 result.tar.gz
[2026-03-02 16:38:48] -rw-r--r--. 1 boinc boinc      8635 Mar  2 16:38 runtime_log.err
[2026-03-02 16:38:48] -rw-------. 1 boinc boinc       643 Mar  2 16:38 dczMDmvbOH9n9Rq4apOajLDm4fhM0noT9bVooX4SDm9jCLDmNyuLBn.diag
[2026-03-02 16:38:48] -rw-r--r--. 1 boinc boinc     21777 Mar  2 16:38 stderr.txt
[2026-03-02 16:38:48] No HITS result produced
[2026-03-02 16:38:48]  *** Contents of shared directory: ***
[2026-03-02 16:38:48] total 261472
[2026-03-02 16:38:48] -rw-r--r--. 2 boinc boinc 267007392 Mar  2 16:35 ATLAS.root_0
[2026-03-02 16:38:48] -rw-r--r--. 2 boinc boinc     15845 Mar  2 16:35 start_atlas.sh
[2026-03-02 16:38:48] -rw-r--r--. 2 boinc boinc    597954 Mar  2 16:35 input.tar.gz
[2026-03-02 16:38:48] -rw-------. 1 boinc boinc    122880 Mar  2 16:38 result.tar.gz
16:38:49 (1655580): run_atlas exited; CPU time 17.483191
16:38:49 (1655580): called boinc_finish(0)

</stderr_txt>
]]>

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