Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:59:47 (2210359): wrapper (7.7.26015): starting
15:59:47 (2210359): wrapper: running run_atlas (--nthreads 12)
[2026-03-02 15:59:47] Arguments: --nthreads 12
[2026-03-02 15:59:47] Threads: 12
[2026-03-02 15:59:47] Checking for CVMFS
[2026-03-02 15:59:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 15:59:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 15:59:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 15:59:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 15:59:50] 2.11.5.0 3810059 132108 273700 156825 3 550 31281271 45568000 18592 130560 0 832544588 99.807 500013791 18930 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-02 15:59:50] CVMFS is ok
[2026-03-02 15:59:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 15:59:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 15:59:50] Further information can be found at the LHC@home message board.
[2026-03-02 15:59:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 15:59:50] Checking for apptainer binary...
[2026-03-02 15:59:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 15:59:50] Running /usr/bin/apptainer --version
[2026-03-02 15:59:50] apptainer version 1.4.1-1.el9
[2026-03-02 15:59:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 15:59:51] wns0043.triumf.lcg
[2026-03-02 15:59:51] apptainer works
[2026-03-02 15:59:51] Set ATHENA_PROC_NUMBER=12
[2026-03-02 15:59:51] Set ATHENA_CORE_NUMBER=12
[2026-03-02 15:59:51] Starting ATLAS job with PandaID=7036108191
[2026-03-02 15:59:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 16:06:24]  *** The last 200 lines of the pilot log: ***
[2026-03-02 16:06:24] 2026-03-03 00:05:49,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 16:06:24] 2026-03-03 00:05:49,609 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 16:06:24] 2026-03-03 00:05:49,609 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 16:06:24] 2026-03-03 00:05:49,623 | WARNING  | wrong length of table data, x=[1772496146.0, 1772496207.0], y=[1377.0, 608025.0] (must be same and length>=4)
[2026-03-02 16:06:24] 2026-03-03 00:05:49,623 | INFO     | could have reported an average CPU frequency of 1450 MHz (4 samples)
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | ..............................
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . Timing measurements:
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . get job = 0 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . initial setup = 36 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . payload setup = 38 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . stage-in = 0 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . payload execution = 111 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . stage-out = 2 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . log creation = 0 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | ..............................
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 16:06:24] 2026-03-03 00:05:49,625 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036108191/pilotlog.txt
[2026-03-02 16:06:24] 2026-03-03 00:05:49,813 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-02 16:06:24] - Log from pilotlog.txt -
[2026-03-02 16:06:24] 2026-03-03 00:05:49,608 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7036108191/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 16:06:24] 2026-03-03 00:05:49,609 | INFO     | extracted standard info from prmon json
[2026-03-02 16:06:24] 2026-03-03 00:05:49,609 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 16:06:24] 2026-03-03 00:05:49,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 16:06:24] 2026-03-03 00:05:49,609 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 16:06:24] 2026-03-03 00:05:49,609 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 16:06:24] 2026-03-03 00:05:49,623 | WARNING  | wrong length of table data, x=[1772496146.0, 1772496207.0], y=[1377.0, 608025.0] (must be same and length>=4)
[2026-03-02 16:06:24] 2026-03-03 00:05:49,623 | INFO     | could have reported an average CPU frequency of 1450 MHz (4 samples)
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | ..............................
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . Timing measurements:
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . get job = 0 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . initial setup = 36 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . payload setup = 38 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . stage-in = 0 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . payload execution = 111 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . stage-out = 2 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . log creation = 0 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | ..............................
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 16:06:24] 2026-03-03 00:05:49,625 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036108191/pilotlog.txt
[2026-03-02 16:06:24] 2026-03-03 00:05:49,814 | WARNING  | 
[2026-03-02 16:06:24] [begin log extracts]
[2026-03-02 16:06:24] - Log from pilotlog.txt -
[2026-03-02 16:06:24] 2026-03-03 00:05:49,608 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7036108191/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 16:06:24] 2026-03-03 00:05:49,609 | INFO     | extracted standard info from prmon json
[2026-03-02 16:06:24] 2026-03-03 00:05:49,609 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 16:06:24] 2026-03-03 00:05:49,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 16:06:24] 2026-03-03 00:05:49,609 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 16:06:24] 2026-03-03 00:05:49,609 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 16:06:24] 2026-03-03 00:05:49,623 | WARNING  | wrong length of table data, x=[1772496146.0, 1772496207.0], y=[1377.0, 608025.0] (must be same and length>=4)
[2026-03-02 16:06:24] 2026-03-03 00:05:49,623 | INFO     | could have reported an average CPU frequency of 1450 MHz (4 samples)
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | ..............................
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . Timing measurements:
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . get job = 0 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . initial setup = 36 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . payload setup = 38 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . stage-in = 0 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . payload execution = 111 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . stage-out = 2 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | . log creation = 0 s
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | ..............................
[2026-03-02 16:06:24] 2026-03-03 00:05:49,624 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 16:06:24] 2026-03-03 00:05:49,625 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036108191/pilotlog.txt
[2026-03-02 16:06:24] [end log extracts]
[2026-03-02 16:06:24] 2026-03-03 00:05:49,814 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-02 16:06:24] 2026-03-03 00:05:49,815 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-02 16:06:24] 2026-03-03 00:05:50,295 | INFO     | 
[2026-03-02 16:06:24] 2026-03-03 00:05:50,295 | INFO     | job summary report
[2026-03-02 16:06:24] 2026-03-03 00:05:50,295 | INFO     | --------------------------------------------------
[2026-03-02 16:06:24] 2026-03-03 00:05:50,295 | INFO     | PanDA job id: 7036108191
[2026-03-02 16:06:24] 2026-03-03 00:05:50,295 | INFO     | task id: 48838586
[2026-03-02 16:06:24] 2026-03-03 00:05:50,295 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-02 16:03:35,705 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-02 16:06:24] 2026-03-03 00:05:50,295 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 16:06:24] 2026-03-03 00:05:50,295 | INFO     | pilot state: failed 
[2026-03-02 16:06:24] 2026-03-03 00:05:50,296 | INFO     | transexitcode: 65
[2026-03-02 16:06:24] 2026-03-03 00:05:50,296 | INFO     | exeerrorcode: 65
[2026-03-02 16:06:24] 2026-03-03 00:05:50,296 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-02 16:06:24] 2026-03-03 00:05:50,296 | INFO     | exitcode: 65
[2026-03-02 16:06:24] 2026-03-03 00:05:50,296 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-02 16:06:24] 2026-03-03 00:05:50,296 | INFO     | cpuconsumptiontime: 25 s
[2026-03-02 16:06:24] 2026-03-03 00:05:50,296 | INFO     | nevents: 0
[2026-03-02 16:06:24] 2026-03-03 00:05:50,296 | INFO     | neventsw: 0
[2026-03-02 16:06:24] 2026-03-03 00:05:50,296 | INFO     | pid: 2233761
[2026-03-02 16:06:24] 2026-03-03 00:05:50,296 | INFO     | pgrp: 2233761
[2026-03-02 16:06:24] 2026-03-03 00:05:50,296 | INFO     | corecount: 12
[2026-03-02 16:06:24] 2026-03-03 00:05:50,296 | INFO     | event service: False
[2026-03-02 16:06:24] 2026-03-03 00:05:50,297 | INFO     | sizes: {0: 2281786, 1: 2281814, 2: 2282275, 155: 2305561, 156: 2305537, 159: 2309857, 160: 2310013, 279: 2310179}
[2026-03-02 16:06:24] 2026-03-03 00:05:50,297 | INFO     | --------------------------------------------------
[2026-03-02 16:06:24] 2026-03-03 00:05:50,297 | INFO     | 
[2026-03-02 16:06:24] 2026-03-03 00:05:50,297 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-02 16:06:24] 2026-03-03 00:05:50,429 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,430 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,430 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,430 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,430 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,430 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,430 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,431 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,431 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,431 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,431 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,431 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,431 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,431 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,431 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,431 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,431 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,431 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 16:06:24] 2026-03-03 00:05:50,432 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,432 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 16:06:24] 2026-03-03 00:05:50,432 | INFO     | job 7036108191 has completed (purged errors)
[2026-03-02 16:06:24] 2026-03-03 00:05:50,432 | INFO     | overall cleanup function is called
[2026-03-02 16:06:24] 2026-03-03 00:05:51,459 | INFO     | --- collectZombieJob: --- 10, [2233761]
[2026-03-02 16:06:24] 2026-03-03 00:05:51,459 | INFO     | zombie collector waiting for pid 2233761
[2026-03-02 16:06:24] 2026-03-03 00:05:51,459 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 16:06:24] 2026-03-03 00:05:51,459 | INFO     | collected zombie processes
[2026-03-02 16:06:24] 2026-03-03 00:05:51,459 | INFO     | will attempt to kill all subprocesses of pid=2233761
[2026-03-02 16:06:24] 2026-03-03 00:05:53,236 | INFO     | process IDs to be killed: [2233761] (in reverse order)
[2026-03-02 16:06:24] 2026-03-03 00:05:53,501 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 16:06:24] 2026-03-03 00:05:53,502 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 16:06:24] 2026-03-03 00:05:53,557 | INFO     | did not find any defunct processes belonging to 2233761
[2026-03-02 16:06:24] 2026-03-03 00:05:53,613 | INFO     | did not find any defunct processes belonging to 2233761
[2026-03-02 16:06:24] 2026-03-03 00:05:53,614 | INFO     | ready for new job
[2026-03-02 16:06:24] 2026-03-03 00:05:53,614 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 16:06:24] 2026-03-03 00:05:53,644 | INFO     | **************************************
[2026-03-02 16:06:24] 2026-03-03 00:05:53,644 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 16:06:24] 2026-03-03 00:05:53,645 | INFO     | **************************************
[2026-03-02 16:06:24] 2026-03-03 00:05:53,645 | INFO     | 
[2026-03-02 16:06:24] 2026-03-03 00:05:53,661 | INFO     | architecture information:
[2026-03-02 16:06:24] 2026-03-03 00:05:53,662 | INFO     | executing command: cat /etc/os-release
[2026-03-02 16:06:24] 2026-03-03 00:05:53,812 | INFO     | cat /etc/os-release:
[2026-03-02 16:06:24] NAME="CentOS Linux"
[2026-03-02 16:06:24] VERSION="7 (Core)"
[2026-03-02 16:06:24] ID="centos"
[2026-03-02 16:06:24] ID_LIKE="rhel fedora"
[2026-03-02 16:06:24] VERSION_ID="7"
[2026-03-02 16:06:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 16:06:24] ANSI_COLOR="0;31"
[2026-03-02 16:06:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 16:06:24] HOME_URL="https://www.centos.org/"
[2026-03-02 16:06:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 16:06:24] 
[2026-03-02 16:06:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 16:06:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 16:06:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 16:06:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 16:06:24] 
[2026-03-02 16:06:24] 2026-03-03 00:05:53,813 | INFO     | **************************************
[2026-03-02 16:06:24] 2026-03-03 00:05:54,318 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-02 16:06:24] 2026-03-03 00:05:54,424 | INFO     | sufficient remaining disk space (2071390584832 B)
[2026-03-02 16:06:24] 2026-03-03 00:05:54,425 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 16:06:24] 2026-03-03 00:05:54,425 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 16:06:24] 2026-03-03 00:05:54,425 | INFO     | update_server=False
[2026-03-02 16:06:24] 2026-03-03 00:05:54,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 16:06:24] 2026-03-03 00:05:54,425 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 16:06:24] 2026-03-03 00:05:54,426 | INFO     | aborting loop
[2026-03-02 16:06:24] 2026-03-03 00:05:54,709 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 16:06:24] 2026-03-03 00:05:55,170 | INFO     | all data control threads have been joined
[2026-03-02 16:06:24] 2026-03-03 00:05:55,339 | INFO     | all payload control threads have been joined
[2026-03-02 16:06:24] 2026-03-03 00:05:55,359 | INFO     | all job control threads have been joined
[2026-03-02 16:06:24] 2026-03-03 00:05:55,366 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 16:06:24] 2026-03-03 00:05:55,430 | INFO     | [job] retrieve thread has finished
[2026-03-02 16:06:24] 2026-03-03 00:05:55,434 | INFO     | [job] job monitor thread has finished
[2026-03-02 16:06:24] 2026-03-03 00:05:55,752 | INFO     | [payload] failed_post thread has finished
[2026-03-02 16:06:24] 2026-03-03 00:05:55,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 16:06:24] 2026-03-03 00:05:56,009 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 16:06:24] 2026-03-03 00:05:56,029 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 16:06:24] 2026-03-03 00:05:56,176 | INFO     | [data] control thread has finished
[2026-03-02 16:06:24] 2026-03-03 00:05:56,345 | INFO     | [payload] control thread has finished
[2026-03-02 16:06:24] 2026-03-03 00:05:56,368 | INFO     | [job] control thread has finished
[2026-03-02 16:06:24] 2026-03-03 00:05:56,372 | INFO     | [job] queue monitor thread has finished
[2026-03-02 16:06:24] 2026-03-03 00:05:56,515 | INFO     | [payload] validate_post thread has finished
[2026-03-02 16:06:24] 2026-03-03 00:05:56,690 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 16:06:24] 2026-03-03 00:05:56,690 | INFO     | [data] copytool_in thread has finished
[2026-03-02 16:06:24] 2026-03-03 00:05:56,691 | INFO     | [job] validate thread has finished
[2026-03-02 16:06:24] 2026-03-03 00:05:56,691 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 16:06:24] 2026-03-03 00:05:57,787 | INFO     | [data] copytool_out thread has finished
[2026-03-02 16:06:24] 2026-03-03 00:05:58,718 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 16:06:24] 2026-03-03 00:06:08,734 | INFO     | [monitor] cgroup control has ended
[2026-03-02 16:06:24] 2026-03-03 00:06:10,214 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139775156254528)>', '<ExcThread(monitor, started 139774828447488)>']
[2026-03-02 16:06:24] 2026-03-03 00:06:15,240 | INFO     | all workflow threads have been joined
[2026-03-02 16:06:24] 2026-03-03 00:06:15,240 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 16:06:24] 2026-03-03 00:06:15,240 | INFO     | traces error code: 0
[2026-03-02 16:06:24] 2026-03-03 00:06:15,241 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 16:06:24] 2026-03-03 00:06:23,138 | INFO     | PID=2217752 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 16:06:24] 2026-03-03 00:06:23,138 | INFO     | .. there are 28 such processes running
[2026-03-02 16:06:24] 2026-03-03 00:06:23,138 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 16:06:24] 2026-03-03 00:06:23,138 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 16:06:24] 2026-03-03 00:06:23,138 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 16:06:24] 2026-03-03 00:06:23,139 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 16:06:24] 2026-03-03 00:06:23,139 | INFO     | [monitor] control thread has ended
[2026-03-02 16:06:24] 2026-03-03 00:06:23,702 [wrapper] ==== pilot stdout END ====
[2026-03-02 16:06:24] 2026-03-03 00:06:23,727 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 16:06:24] 2026-03-03 00:06:23,752 [wrapper] pilotpid: 2217752
[2026-03-02 16:06:24] 2026-03-03 00:06:23,810 [wrapper] Pilot exit status: 0
[2026-03-02 16:06:24] 2026-03-03 00:06:23,926 [wrapper] pandaids: 7036108191
[2026-03-02 16:06:24] 2026-03-03 00:06:24,028 [wrapper] cleanup supervisor_pilot 2217769 2217753
[2026-03-02 16:06:24] 2026-03-03 00:06:24,032 [wrapper] Test setup, not cleaning
[2026-03-02 16:06:24] 2026-03-03 00:06:24,035 [wrapper] apfmon messages muted
[2026-03-02 16:06:24] 2026-03-03 00:06:24,039 [wrapper] ==== wrapper stdout END ====
[2026-03-02 16:06:24] 2026-03-03 00:06:24,042 [wrapper] ==== wrapper stderr END ====
[2026-03-02 16:06:24]  *** Error codes and diagnostics ***
[2026-03-02 16:06:24]     "exeErrorCode": 65,
[2026-03-02 16:06:24]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-02 16:06:24]     "pilotErrorCode": 1305,
[2026-03-02 16:06:24]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-02 16:06:24]  *** Listing of results directory ***
[2026-03-02 16:06:24] total 275096
[2026-03-02 16:06:24] -rw-r--r--. 1 boinc boinc    584627 Mar  2 11:44 pilot3.tar.gz
[2026-03-02 16:06:24] -rwx------. 1 boinc boinc     36322 Mar  2 11:58 runpilot2-wrapper.sh
[2026-03-02 16:06:24] -rw-r--r--. 1 boinc boinc      5111 Mar  2 11:58 queuedata.json
[2026-03-02 16:06:24] -rw-r--r--. 1 boinc boinc       100 Mar  2 15:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 16:06:24] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 15:59 run_atlas
[2026-03-02 16:06:24] -rw-r--r--. 1 boinc boinc       105 Mar  2 15:59 job.xml
[2026-03-02 16:06:24] -rw-r--r--. 2 boinc boinc 277546949 Mar  2 15:59 EVNT.48220221._000082.pool.root.1
[2026-03-02 16:06:24] -rw-r--r--. 1 boinc boinc      6594 Mar  2 15:59 init_data.xml
[2026-03-02 16:06:24] -rw-r--r--. 2 boinc boinc     15845 Mar  2 15:59 start_atlas.sh
[2026-03-02 16:06:24] drwxrwx--x. 2 boinc boinc      4096 Mar  2 15:59 shared
[2026-03-02 16:06:24] -rw-r--r--. 2 boinc boinc    597953 Mar  2 15:59 input.tar.gz
[2026-03-02 16:06:24] -rw-r--r--. 1 boinc boinc         0 Mar  2 15:59 boinc_lockfile
[2026-03-02 16:06:24] -rw-r--r--. 1 boinc boinc      2561 Mar  2 15:59 pandaJob.out
[2026-03-02 16:06:24] -rw-------. 1 boinc boinc    997722 Mar  2 16:00 agis_schedconf.cvmfs.json
[2026-03-02 16:06:24] -rw-------. 1 boinc boinc   1512931 Mar  2 16:00 agis_ddmendpoints.agis.ALL.json
[2026-03-02 16:06:24] -rw-------. 1 boinc boinc       445 Mar  2 16:01 workernode_map.json
[2026-03-02 16:06:24] drwx------. 5 boinc boinc      4096 Mar  2 16:01 pilot3
[2026-03-02 16:06:24] -rw-r--r--. 1 boinc boinc       525 Mar  2 16:03 boinc_task_state.xml
[2026-03-02 16:06:24] -rw-------. 1 boinc boinc       987 Mar  2 16:03 memory_monitor_summary.json
[2026-03-02 16:06:24] -rw-------. 1 boinc boinc     22444 Mar  2 16:03 log.48838586._002098.job.log.tgz.1
[2026-03-02 16:06:24] -rw-------. 1 boinc boinc        95 Mar  2 16:05 pilot_heartbeat.json
[2026-03-02 16:06:24] -rw-------. 1 boinc boinc      7069 Mar  2 16:05 heartbeat.json
[2026-03-02 16:06:24] -rw-r--r--. 1 boinc boinc        23 Mar  2 16:06 wrapper_checkpoint.txt
[2026-03-02 16:06:24] -rw-r--r--. 1 boinc boinc      8192 Mar  2 16:06 boinc_mmap_file
[2026-03-02 16:06:24] -rw-------. 1 boinc boinc       823 Mar  2 16:06 pilotlog.txt
[2026-03-02 16:06:24] -rw-------. 1 boinc boinc     92664 Mar  2 16:06 log.48838586._002098.job.log.1
[2026-03-02 16:06:24] -rw-------. 1 boinc boinc       188 Mar  2 16:06 output.list
[2026-03-02 16:06:24] -rw-r--r--. 1 boinc boinc       620 Mar  2 16:06 runtime_log
[2026-03-02 16:06:24] -rw-------. 1 boinc boinc    133120 Mar  2 16:06 result.tar.gz
[2026-03-02 16:06:24] -rw-r--r--. 1 boinc boinc      8635 Mar  2 16:06 runtime_log.err
[2026-03-02 16:06:24] -rw-------. 1 boinc boinc       643 Mar  2 16:06 jAwMDmdaOH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTeCLDmEaEmKn.diag
[2026-03-02 16:06:24] -rw-r--r--. 1 boinc boinc     21871 Mar  2 16:06 stderr.txt
[2026-03-02 16:06:24] No HITS result produced
[2026-03-02 16:06:24]  *** Contents of shared directory: ***
[2026-03-02 16:06:24] total 271780
[2026-03-02 16:06:24] -rw-r--r--. 2 boinc boinc 277546949 Mar  2 15:59 ATLAS.root_0
[2026-03-02 16:06:24] -rw-r--r--. 2 boinc boinc     15845 Mar  2 15:59 start_atlas.sh
[2026-03-02 16:06:24] -rw-r--r--. 2 boinc boinc    597953 Mar  2 15:59 input.tar.gz
[2026-03-02 16:06:24] -rw-------. 1 boinc boinc    133120 Mar  2 16:06 result.tar.gz
16:06:26 (2210359): run_atlas exited; CPU time 35.865167
16:06:26 (2210359): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN