Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:36:23 (1483055): wrapper (7.7.26015): starting
11:36:23 (1483055): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 11:36:23] Arguments: --nthreads 4
[2026-03-03 11:36:23] Threads: 4
[2026-03-03 11:36:23] Checking for CVMFS
[2026-03-03 11:36:23] No cvmfs_config command found, will try listing directly
[2026-03-03 11:36:23] CVMFS is ok
[2026-03-03 11:36:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 11:36:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 11:36:23] Further information can be found at the LHC@home message board.
[2026-03-03 11:36:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 11:36:23] Checking for apptainer binary...
[2026-03-03 11:36:23] which: no apptainer in ((null))
[2026-03-03 11:36:23] apptainer is not installed, using version from CVMFS
[2026-03-03 11:36:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 11:36:24] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2026-03-03 11:36:24] apptainer works
[2026-03-03 11:36:24] Set ATHENA_PROC_NUMBER=4
[2026-03-03 11:36:24] Set ATHENA_CORE_NUMBER=4
[2026-03-03 11:36:24] Starting ATLAS job with PandaID=7036103736
[2026-03-03 11:36:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 15:13:08]  *** The last 200 lines of the pilot log: ***
[2026-03-03 15:13:08] 2026-03-03 14:12:02,829 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 15:13:08] 2026-03-03 14:12:02,830 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 15:13:08] 2026-03-03 14:12:02,830 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 15:13:08] 2026-03-03 14:12:02,830 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 15:13:08] 2026-03-03 14:12:02,834 | INFO     | fitting pss+swap vs Time
[2026-03-03 15:13:08] 2026-03-03 14:12:02,835 | INFO     | sum of square deviations: 2954447953.0
[2026-03-03 15:13:08] 2026-03-03 14:12:02,836 | INFO     | sum of deviations: 4488630221.999994
[2026-03-03 15:13:08] 2026-03-03 14:12:02,836 | INFO     | mean x: 1772540660.5
[2026-03-03 15:13:08] 2026-03-03 14:12:02,837 | INFO     | mean y: 2331148.1603773586
[2026-03-03 15:13:08] 2026-03-03 14:12:02,837 | INFO     | intersect: -2690652348.253963
[2026-03-03 15:13:08] 2026-03-03 14:12:02,837 | INFO     | chi2: 2.1252928996114937
[2026-03-03 15:13:08] 2026-03-03 14:12:02,838 | INFO     | sum of square deviations: 2750295288.0
[2026-03-03 15:13:08] 2026-03-03 14:12:02,839 | INFO     | sum of deviations: 17321767094.999996
[2026-03-03 15:13:08] 2026-03-03 14:12:02,839 | INFO     | mean x: 1772540508.0
[2026-03-03 15:13:08] 2026-03-03 14:12:02,839 | INFO     | mean y: 2340546.2898550723
[2026-03-03 15:13:08] 2026-03-03 14:12:02,839 | INFO     | intersect: -11161382120.142963
[2026-03-03 15:13:08] 2026-03-03 14:12:02,840 | INFO     | chi2: 1.354740816946807
[2026-03-03 15:13:08] 2026-03-03 14:12:02,840 | INFO     | current chi2=1.354740816946807 (change=36.256277090350444 %)
[2026-03-03 15:13:08] 2026-03-03 14:12:02,840 | INFO     | sum of square deviations: 2555770710.5
[2026-03-03 15:13:08] 2026-03-03 14:12:02,842 | INFO     | sum of deviations: 16752106273.0
[2026-03-03 15:13:08] 2026-03-03 14:12:02,842 | INFO     | mean x: 1772540355.5
[2026-03-03 15:13:08] 2026-03-03 14:12:02,842 | INFO     | mean y: 2340099.623762376
[2026-03-03 15:13:08] 2026-03-03 14:12:02,842 | INFO     | intersect: -11615988683.363205
[2026-03-03 15:13:08] 2026-03-03 14:12:02,842 | INFO     | chi2: 1.355498393927967
[2026-03-03 15:13:08] 2026-03-03 14:12:02,843 | INFO     | current chi2=1.355498393927967 (change=-0.05592043671256902 %)
[2026-03-03 15:13:08] 2026-03-03 14:12:02,843 | INFO     | right removable region: 201
[2026-03-03 15:13:08] 2026-03-03 14:12:02,843 | INFO     | sum of square deviations: 2750295288.0
[2026-03-03 15:13:08] 2026-03-03 14:12:02,844 | INFO     | sum of deviations: -22671252314.0
[2026-03-03 15:13:08] 2026-03-03 14:12:02,845 | INFO     | mean x: 1772540813.0
[2026-03-03 15:13:08] 2026-03-03 14:12:02,845 | INFO     | mean y: 2351192.0193236717
[2026-03-03 15:13:08] 2026-03-03 14:12:02,845 | INFO     | intersect: 14613771348.87402
[2026-03-03 15:13:08] 2026-03-03 14:12:02,845 | INFO     | chi2: 0.8200031931371436
[2026-03-03 15:13:08] 2026-03-03 14:12:02,845 | INFO     | current chi2=0.8200031931371436 (change=61.41693254200204 %)
[2026-03-03 15:13:08] 2026-03-03 14:12:02,846 | INFO     | sum of square deviations: 2555770710.5
[2026-03-03 15:13:08] 2026-03-03 14:12:02,847 | INFO     | sum of deviations: -20162988159.5
[2026-03-03 15:13:08] 2026-03-03 14:12:02,847 | INFO     | mean x: 1772540965.5
[2026-03-03 15:13:08] 2026-03-03 14:12:02,847 | INFO     | mean y: 2349221.094059406
[2026-03-03 15:13:08] 2026-03-03 14:12:02,847 | INFO     | intersect: 13986280703.199993
[2026-03-03 15:13:08] 2026-03-03 14:12:02,848 | INFO     | chi2: 0.8181038252522721
[2026-03-03 15:13:08] 2026-03-03 14:12:02,848 | INFO     | current chi2=0.8181038252522721 (change=0.23162932788163976 %)
[2026-03-03 15:13:08] 2026-03-03 14:12:02,848 | INFO     | left removable region: 20
[2026-03-03 15:13:08] 2026-03-03 14:12:02,848 | INFO     | sum of square deviations: 1838657730.0
[2026-03-03 15:13:08] 2026-03-03 14:12:02,850 | INFO     | sum of deviations: -1677646949.0000002
[2026-03-03 15:13:08] 2026-03-03 14:12:02,850 | INFO     | mean x: 1772540935.0
[2026-03-03 15:13:08] 2026-03-03 14:12:02,850 | INFO     | mean y: 2354218.325966851
[2026-03-03 15:13:08] 2026-03-03 14:12:02,850 | INFO     | intersect: 1619674202.9325407
[2026-03-03 15:13:08] 2026-03-03 14:12:02,850 | INFO     | chi2: 0.014135440744025536
[2026-03-03 15:13:08] 2026-03-03 14:12:02,850 | INFO     | current memory leak: -0.91 B/s (using 181 data points, chi2=0.01)
[2026-03-03 15:13:08] 2026-03-03 14:12:02,851 | INFO     | could have reported an average CPU frequency of 2509 MHz (11 samples)
[2026-03-03 15:13:08] 2026-03-03 14:12:02,851 | INFO     | ..............................
[2026-03-03 15:13:08] 2026-03-03 14:12:02,851 | INFO     | . Timing measurements:
[2026-03-03 15:13:08] 2026-03-03 14:12:02,851 | INFO     | . get job = 0 s
[2026-03-03 15:13:08] 2026-03-03 14:12:02,851 | INFO     | . initial setup = 5 s
[2026-03-03 15:13:08] 2026-03-03 14:12:02,852 | INFO     | . payload setup = 6 s
[2026-03-03 15:13:08] 2026-03-03 14:12:02,852 | INFO     | . stage-in = 0 s
[2026-03-03 15:13:08] 2026-03-03 14:12:02,852 | INFO     | . payload execution = 12896 s
[2026-03-03 15:13:08] 2026-03-03 14:12:02,852 | INFO     | . stage-out = 1 s
[2026-03-03 15:13:08] 2026-03-03 14:12:02,852 | INFO     | . log creation = 0 s
[2026-03-03 15:13:08] 2026-03-03 14:12:02,852 | INFO     | ..............................
[2026-03-03 15:13:08] 2026-03-03 14:12:03,205 | INFO     | 
[2026-03-03 15:13:08] 2026-03-03 14:12:03,205 | INFO     | job summary report
[2026-03-03 15:13:08] 2026-03-03 14:12:03,205 | INFO     | --------------------------------------------------
[2026-03-03 15:13:08] 2026-03-03 14:12:03,206 | INFO     | PanDA job id: 7036103736
[2026-03-03 15:13:08] 2026-03-03 14:12:03,206 | INFO     | task id: 48838447
[2026-03-03 15:13:08] 2026-03-03 14:12:03,206 | INFO     | errors: (none)
[2026-03-03 15:13:08] 2026-03-03 14:12:03,206 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 15:13:08] 2026-03-03 14:12:03,206 | INFO     | pilot state: finished 
[2026-03-03 15:13:08] 2026-03-03 14:12:03,206 | INFO     | transexitcode: 0
[2026-03-03 15:13:08] 2026-03-03 14:12:03,206 | INFO     | exeerrorcode: 0
[2026-03-03 15:13:08] 2026-03-03 14:12:03,206 | INFO     | exeerrordiag: 
[2026-03-03 15:13:08] 2026-03-03 14:12:03,206 | INFO     | exitcode: 0
[2026-03-03 15:13:08] 2026-03-03 14:12:03,206 | INFO     | exitmsg: OK
[2026-03-03 15:13:08] 2026-03-03 14:12:03,206 | INFO     | cpuconsumptiontime: 49096 s
[2026-03-03 15:13:08] 2026-03-03 14:12:03,206 | INFO     | nevents: 400
[2026-03-03 15:13:08] 2026-03-03 14:12:03,206 | INFO     | neventsw: 0
[2026-03-03 15:13:08] 2026-03-03 14:12:03,206 | INFO     | pid: 1491885
[2026-03-03 15:13:08] 2026-03-03 14:12:03,207 | INFO     | pgrp: 1491885
[2026-03-03 15:13:08] 2026-03-03 14:12:03,207 | INFO     | corecount: 4
[2026-03-03 15:13:08] 2026-03-03 14:12:03,207 | INFO     | event service: False
[2026-03-03 15:13:08] 2026-03-03 14:12:03,207 | INFO     | sizes: {0: 2286888, 1: 2287094, 11: 2287122, 12906: 2317145, 12908: 2326165, 12910: 2326543}
[2026-03-03 15:13:08] 2026-03-03 14:12:03,207 | INFO     | --------------------------------------------------
[2026-03-03 15:13:08] 2026-03-03 14:12:03,207 | INFO     | 
[2026-03-03 15:13:08] 2026-03-03 14:12:03,207 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2026-03-03 15:13:08] 2026-03-03 14:12:03,230 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,230 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,230 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,230 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,231 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,231 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,231 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,231 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,231 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,231 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,231 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,231 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,231 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,231 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,232 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 15:13:08] 2026-03-03 14:12:03,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,232 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 15:13:08] 2026-03-03 14:12:03,232 | INFO     | job 7036103736 has completed (purged errors)
[2026-03-03 15:13:08] 2026-03-03 14:12:03,232 | INFO     | overall cleanup function is called
[2026-03-03 15:13:08] 2026-03-03 14:12:03,346 | WARNING  | process 1491885 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 15:13:08] 2026-03-03 14:12:03,650 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 15:13:08] 2026-03-03 14:12:04,049 | INFO     | number of running child processes to parent process 1491885: 1
[2026-03-03 15:13:08] 2026-03-03 14:12:04,049 | INFO     | maximum number of monitored processes: 6
[2026-03-03 15:13:08] 2026-03-03 14:12:04,049 | INFO     | aborting job monitoring since job object (job id=7036103736) has expired
[2026-03-03 15:13:08] 2026-03-03 14:12:04,242 | INFO     | --- collectZombieJob: --- 10, [1491885]
[2026-03-03 15:13:08] 2026-03-03 14:12:04,242 | INFO     | zombie collector waiting for pid 1491885
[2026-03-03 15:13:08] 2026-03-03 14:12:04,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 15:13:08] 2026-03-03 14:12:04,243 | INFO     | collected zombie processes
[2026-03-03 15:13:08] 2026-03-03 14:12:04,243 | INFO     | will attempt to kill all subprocesses of pid=1491885
[2026-03-03 15:13:08] 2026-03-03 14:12:04,595 | INFO     | process IDs to be killed: [1491885] (in reverse order)
[2026-03-03 15:13:08] 2026-03-03 14:12:04,719 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 15:13:08] 2026-03-03 14:12:04,720 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 15:13:08] 2026-03-03 14:12:04,732 | INFO     | did not find any defunct processes belonging to 1491885
[2026-03-03 15:13:08] 2026-03-03 14:12:04,743 | INFO     | did not find any defunct processes belonging to 1491885
[2026-03-03 15:13:08] 2026-03-03 14:12:04,744 | INFO     | ready for new job
[2026-03-03 15:13:08] 2026-03-03 14:12:04,744 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 15:13:08] 2026-03-03 14:12:04,747 | INFO     | **************************************
[2026-03-03 15:13:08] 2026-03-03 14:12:04,747 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 15:13:08] 2026-03-03 14:12:04,747 | INFO     | **************************************
[2026-03-03 15:13:08] 2026-03-03 14:12:04,747 | INFO     | 
[2026-03-03 15:13:08] 2026-03-03 14:12:04,751 | INFO     | architecture information:
[2026-03-03 15:13:08] 2026-03-03 14:12:04,751 | INFO     | executing command: cat /etc/os-release
[2026-03-03 15:13:08] 2026-03-03 14:12:04,770 | INFO     | cat /etc/os-release:
[2026-03-03 15:13:08] NAME="CentOS Linux"
[2026-03-03 15:13:08] VERSION="7 (Core)"
[2026-03-03 15:13:08] ID="centos"
[2026-03-03 15:13:08] ID_LIKE="rhel fedora"
[2026-03-03 15:13:08] VERSION_ID="7"
[2026-03-03 15:13:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 15:13:08] ANSI_COLOR="0;31"
[2026-03-03 15:13:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 15:13:08] HOME_URL="https://www.centos.org/"
[2026-03-03 15:13:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 15:13:08] 
[2026-03-03 15:13:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 15:13:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 15:13:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 15:13:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 15:13:08] 
[2026-03-03 15:13:08] 2026-03-03 14:12:04,770 | INFO     | **************************************
[2026-03-03 15:13:08] 2026-03-03 14:12:05,274 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2026-03-03 15:13:08] 2026-03-03 14:12:05,293 | INFO     | sufficient remaining disk space (673356709888 B)
[2026-03-03 15:13:08] 2026-03-03 14:12:05,294 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 15:13:08] 2026-03-03 14:12:05,294 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 15:13:08] 2026-03-03 14:12:05,294 | INFO     | update_server=False
[2026-03-03 15:13:08] 2026-03-03 14:12:05,294 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 15:13:08] 2026-03-03 14:12:05,294 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 15:13:08] 2026-03-03 14:12:05,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 15:13:08] 2026-03-03 14:12:05,295 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 15:13:08] 2026-03-03 14:12:05,295 | INFO     | aborting loop
[2026-03-03 15:13:08] 2026-03-03 14:12:05,636 | INFO     | all data control threads have been joined
[2026-03-03 15:13:08] 2026-03-03 14:12:05,638 | INFO     | all payload control threads have been joined
[2026-03-03 15:13:08] 2026-03-03 14:12:06,300 | INFO     | [job] retrieve thread has finished
[2026-03-03 15:13:08] 2026-03-03 14:12:06,301 | INFO     | [job] job monitor thread has finished
[2026-03-03 15:13:08] 2026-03-03 14:12:06,304 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 15:13:08] 2026-03-03 14:12:06,641 | INFO     | [data] control thread has finished
[2026-03-03 15:13:08] 2026-03-03 14:12:06,643 | INFO     | [payload] control thread has finished
[2026-03-03 15:13:08] 2026-03-03 14:12:06,809 | INFO     | all job control threads have been joined
[2026-03-03 15:13:08] 2026-03-03 14:12:06,850 | INFO     | [payload] validate_post thread has finished
[2026-03-03 15:13:08] 2026-03-03 14:12:07,039 | INFO     | [job] validate thread has finished
[2026-03-03 15:13:08] 2026-03-03 14:12:07,209 | INFO     | [payload] failed_post thread has finished
[2026-03-03 15:13:08] 2026-03-03 14:12:07,300 | INFO     | [data] copytool_out thread has finished
[2026-03-03 15:13:08] 2026-03-03 14:12:07,488 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 15:13:08] 2026-03-03 14:12:07,623 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 15:13:08] 2026-03-03 14:12:07,747 | INFO     | [data] copytool_in thread has finished
[2026-03-03 15:13:08] 2026-03-03 14:12:07,814 | INFO     | [job] control thread has finished
[2026-03-03 15:13:08] 2026-03-03 14:12:07,975 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 15:13:08] 2026-03-03 14:12:08,980 | INFO     | [job] queue monitor thread has finished
[2026-03-03 15:13:08] 2026-03-03 14:12:09,301 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 15:13:08] 2026-03-03 14:12:15,853 | INFO     | job.realtimelogging is not enabled
[2026-03-03 15:13:08] 2026-03-03 14:12:16,858 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 15:13:08] 2026-03-03 14:12:35,343 | INFO     | PID=1487143 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 15:13:08] 2026-03-03 14:12:35,343 | INFO     | .. there are 11 such processes running
[2026-03-03 15:13:08] 2026-03-03 14:12:35,344 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 15:13:08] 2026-03-03 14:12:35,344 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 15:13:08] 2026-03-03 14:12:35,344 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 15:13:08] 2026-03-03 14:13:02,567 | INFO     | [monitor] cgroup control has ended
[2026-03-03 15:13:08] 2026-03-03 14:13:03,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22876847454016)>', '<ExcThread(monitor, started 22876609853184)>']
[2026-03-03 15:13:08] 2026-03-03 14:13:04,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 15:13:08] 2026-03-03 14:13:04,490 | INFO     | [monitor] control thread has ended
[2026-03-03 15:13:08] 2026-03-03 14:13:08,598 | INFO     | all workflow threads have been joined
[2026-03-03 15:13:08] 2026-03-03 14:13:08,599 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 15:13:08] 2026-03-03 14:13:08,600 | INFO     | traces error code: 0
[2026-03-03 15:13:08] 2026-03-03 14:13:08,600 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 15:13:08] 2026-03-03 14:13:08,750 [wrapper] ==== pilot stdout END ====
[2026-03-03 15:13:08] 2026-03-03 14:13:08,753 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 15:13:08] 2026-03-03 14:13:08,756 [wrapper] pilotpid: 1487143
[2026-03-03 15:13:08] 2026-03-03 14:13:08,759 [wrapper] Pilot exit status: 0
[2026-03-03 15:13:08] 2026-03-03 14:13:08,770 [wrapper] pandaids: 7036103736
[2026-03-03 15:13:08] 2026-03-03 14:13:08,850 [wrapper] cleanup supervisor_pilot 1687717 1487144
[2026-03-03 15:13:08] 2026-03-03 14:13:08,853 [wrapper] Test setup, not cleaning
[2026-03-03 15:13:08] 2026-03-03 14:13:08,856 [wrapper] apfmon messages muted
[2026-03-03 15:13:08] 2026-03-03 14:13:08,859 [wrapper] ==== wrapper stdout END ====
[2026-03-03 15:13:08] 2026-03-03 14:13:08,861 [wrapper] ==== wrapper stderr END ====
[2026-03-03 15:13:08]  *** Error codes and diagnostics ***
[2026-03-03 15:13:08]     "exeErrorCode": 0,
[2026-03-03 15:13:08]     "exeErrorDiag": "",
[2026-03-03 15:13:08]     "pilotErrorCode": 0,
[2026-03-03 15:13:08]     "pilotErrorDiag": "",
[2026-03-03 15:13:08]  *** Listing of results directory ***
[2026-03-03 15:13:08] total 493048
[2026-03-03 15:13:08] -rw-r--r-- 1 boinc boinc    584627 Mar  2 20:44 pilot3.tar.gz
[2026-03-03 15:13:08] -rw-r--r-- 1 boinc boinc      5111 Mar  2 20:46 queuedata.json
[2026-03-03 15:13:08] -rwx------ 1 boinc boinc     36322 Mar  2 20:46 runpilot2-wrapper.sh
[2026-03-03 15:13:08] -rw-r--r-- 1 boinc boinc       100 Mar  3 11:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 15:13:08] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 11:36 run_atlas
[2026-03-03 15:13:08] -rw-r--r-- 1 boinc boinc       105 Mar  3 11:36 job.xml
[2026-03-03 15:13:08] -rw-r--r-- 2 boinc boinc 283851191 Mar  3 11:36 EVNT.48220117._000145.pool.root.1
[2026-03-03 15:13:08] -rw-r--r-- 1 boinc boinc      6639 Mar  3 11:36 init_data.xml
[2026-03-03 15:13:08] -rw-r--r-- 2 boinc boinc     15845 Mar  3 11:36 start_atlas.sh
[2026-03-03 15:13:08] drwxrwx--x 2 boinc boinc      4096 Mar  3 11:36 shared
[2026-03-03 15:13:08] -rw-r--r-- 2 boinc boinc    597963 Mar  3 11:36 input.tar.gz
[2026-03-03 15:13:08] -rw-r--r-- 1 boinc boinc         0 Mar  3 11:36 boinc_lockfile
[2026-03-03 15:13:08] -rw-r--r-- 1 boinc boinc      2572 Mar  3 11:36 pandaJob.out
[2026-03-03 15:13:08] -rw------- 1 boinc boinc    998420 Mar  3 11:36 agis_schedconf.cvmfs.json
[2026-03-03 15:13:08] -rw------- 1 boinc boinc       452 Mar  3 11:36 workernode_map.json
[2026-03-03 15:13:08] drwx------ 5 boinc boinc      4096 Mar  3 11:36 pilot3
[2026-03-03 15:13:08] -rw------- 1 boinc boinc 212682445 Mar  3 15:11 HITS.48838447._003502.pool.root.1
[2026-03-03 15:13:08] -rw-r--r-- 1 boinc boinc       528 Mar  3 15:11 boinc_task_state.xml
[2026-03-03 15:13:08] -rw------- 1 boinc boinc      1033 Mar  3 15:11 memory_monitor_summary.json
[2026-03-03 15:13:08] -rw------- 1 boinc boinc   1516104 Mar  3 15:12 agis_ddmendpoints.agis.ALL.json
[2026-03-03 15:13:08] -rw------- 1 boinc boinc    383103 Mar  3 15:12 log.48838447._003502.job.log.tgz.1
[2026-03-03 15:13:08] -rw------- 1 boinc boinc      6401 Mar  3 15:12 heartbeat.json
[2026-03-03 15:13:08] -rw------- 1 boinc boinc        95 Mar  3 15:12 pilot_heartbeat.json
[2026-03-03 15:13:08] -rw-r--r-- 1 boinc boinc      8192 Mar  3 15:13 boinc_mmap_file
[2026-03-03 15:13:08] -rw------- 1 boinc boinc      4902 Mar  3 15:13 pilotlog.txt
[2026-03-03 15:13:08] -rw------- 1 boinc boinc   1825148 Mar  3 15:13 log.48838447._003502.job.log.1
[2026-03-03 15:13:08] -rw-r--r-- 1 boinc boinc        27 Mar  3 15:13 wrapper_checkpoint.txt
[2026-03-03 15:13:08] -rw------- 1 boinc boinc       357 Mar  3 15:13 output.list
[2026-03-03 15:13:08] -rw-r--r-- 1 boinc boinc       620 Mar  3 15:13 runtime_log
[2026-03-03 15:13:08] -rw------- 1 boinc boinc   2222080 Mar  3 15:13 result.tar.gz
[2026-03-03 15:13:08] -rw-r--r-- 1 boinc boinc      9205 Mar  3 15:13 runtime_log.err
[2026-03-03 15:13:08] -rw------- 1 boinc boinc       665 Mar  3 15:13 g1lMDmIPOH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmVaELDm7Z5Yum.diag
[2026-03-03 15:13:08] -rw-r--r-- 1 boinc boinc     20848 Mar  3 15:13 stderr.txt
[2026-03-03 15:13:08] HITS file was successfully produced:
[2026-03-03 15:13:08] -rw------- 1 boinc boinc 212682445 Mar  3 15:11 shared/HITS.pool.root.1
[2026-03-03 15:13:08]  *** Contents of shared directory: ***
[2026-03-03 15:13:08] total 487680
[2026-03-03 15:13:08] -rw-r--r-- 2 boinc boinc 283851191 Mar  3 11:36 ATLAS.root_0
[2026-03-03 15:13:08] -rw-r--r-- 2 boinc boinc     15845 Mar  3 11:36 start_atlas.sh
[2026-03-03 15:13:08] -rw-r--r-- 2 boinc boinc    597963 Mar  3 11:36 input.tar.gz
[2026-03-03 15:13:08] -rw------- 1 boinc boinc 212682445 Mar  3 15:11 HITS.pool.root.1
[2026-03-03 15:13:08] -rw------- 1 boinc boinc   2222080 Mar  3 15:13 result.tar.gz
15:13:10 (1483055): run_atlas exited; CPU time 49606.165983
15:13:10 (1483055): called boinc_finish(0)

</stderr_txt>
]]>

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