Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
02:34:45 (650733): wrapper (7.7.26015): starting
02:34:45 (650733): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 02:34:45] Arguments: --nthreads 12
[2026-03-03 02:34:45] Threads: 12
[2026-03-03 02:34:45] Checking for CVMFS
[2026-03-03 02:34:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 02:34:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 02:34:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 02:34:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 02:34:47] 2.12.7.0 991347 8285 70496 156837 3 188 2248411 4194304 2751 130560 0 18294007 99.996 307993 2257 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-03-03 02:34:47] CVMFS is ok
[2026-03-03 02:34:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 02:34:47] Checking for apptainer binary...
[2026-03-03 02:34:47] apptainer is not installed, using version from CVMFS
[2026-03-03 02:34:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 02:34:47] Trebeth
[2026-03-03 02:34:47] apptainer works
[2026-03-03 02:34:47] Set ATHENA_PROC_NUMBER=12
[2026-03-03 02:34:47] Set ATHENA_CORE_NUMBER=12
[2026-03-03 02:34:47] Starting ATLAS job with PandaID=7036032493
[2026-03-03 02:34:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 03:57:16]  *** The last 200 lines of the pilot log: ***
[2026-03-03 03:57:16]  guid=0b2d6ce1-dd0e-4e39-bbe9-9f880f268fa1
[2026-03-03 03:57:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-03 03:57:16]  is_altstaged=None
[2026-03-03 03:57:16]  is_tar=False
[2026-03-03 03:57:16]  lfn=log.48850875._000033.job.log.tgz.1
[2026-03-03 03:57:16]  mtime=0
[2026-03-03 03:57:16]  protocol_id=None
[2026-03-03 03:57:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-03 03:57:16]  replicas=None
[2026-03-03 03:57:16]  scope=mc23_13p6TeV
[2026-03-03 03:57:16]  status=None
[2026-03-03 03:57:16]  status_code=0
[2026-03-03 03:57:16]  storage_token=
[2026-03-03 03:57:16]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-7036032493/log.48850875._000033.job.log.tgz.1
[2026-03-03 03:57:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/74/log.48850875._000033.job.log.tgz.1
[2026-03-03 03:57:16]  workdir=None
[2026-03-03 03:57:16] ]
[2026-03-03 03:57:16] 2026-03-03 08:56:37,706 | INFO     | transferring file log.48850875._000033.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-7036032493/log.48850875._000033.job.log.tgz.1 to /var/lib/boinc
[2026-03-03 03:57:16] 2026-03-03 08:56:37,706 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-7036032493/log.48850875._000033.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.488508
[2026-03-03 03:57:16] 2026-03-03 08:56:37,718 | INFO     | adding to output.list: log.48850875._000033.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/74/log.48850875._000033.job.log.tg
[2026-03-03 03:57:16] 2026-03-03 08:56:37,719 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 03:57:16] 2026-03-03 08:56:37,720 | INFO     | summary of transferred files:
[2026-03-03 03:57:16] 2026-03-03 08:56:37,720 | INFO     |  -- lfn=log.48850875._000033.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 03:57:16] 2026-03-03 08:56:37,720 | INFO     | stage-out finished correctly
[2026-03-03 03:57:16] 2026-03-03 08:56:37,990 | INFO     | monitor loop #368: job 0:7036032493 is in state 'finished'
[2026-03-03 03:57:16] 2026-03-03 08:56:37,990 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 03:57:16] 2026-03-03 08:56:38,830 | INFO     | time since job start (4894s) is within the limit (349056.0s)
[2026-03-03 03:57:16] 2026-03-03 08:56:40,470 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 03:57:16] 2026-03-03 08:56:40,498 | INFO     | monitor loop #369: job 0:7036032493 is in state 'finished'
[2026-03-03 03:57:16] 2026-03-03 08:56:40,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 03:57:16] 2026-03-03 08:56:40,538 | INFO     | job 7036032493 has state=finished
[2026-03-03 03:57:16] 2026-03-03 08:56:40,538 | INFO     | preparing for final server update for job 7036032493 in state='finished'
[2026-03-03 03:57:16] 2026-03-03 08:56:40,539 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-7036032493/jobReport.json
[2026-03-03 03:57:16] 2026-03-03 08:56:40,541 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-03-03 03:57:16] 2026-03-03 08:56:40,541 | INFO     | this job has now completed (state=finished)
[2026-03-03 03:57:16] 2026-03-03 08:56:40,541 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 03:57:16] 2026-03-03 08:56:40,542 | INFO     | log transfer has been attempted: DONE
[2026-03-03 03:57:16] 2026-03-03 08:56:40,542 | INFO     | job 7036032493 has finished - writing final server update
[2026-03-03 03:57:16] 2026-03-03 08:56:40,542 | INFO     | total number of processed events: 400 (read)
[2026-03-03 03:57:16] 2026-03-03 08:56:40,572 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7036032493/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 03:57:16] 2026-03-03 08:56:40,573 | INFO     | extracted standard info from prmon json
[2026-03-03 03:57:16] 2026-03-03 08:56:40,573 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 03:57:16] 2026-03-03 08:56:40,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 03:57:16] 2026-03-03 08:56:40,573 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 03:57:16] 2026-03-03 08:56:40,573 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 03:57:16] 2026-03-03 08:56:40,575 | INFO     | fitting pss+swap vs Time
[2026-03-03 03:57:16] 2026-03-03 08:56:40,575 | INFO     | sum of square deviations: 120605052.0
[2026-03-03 03:57:16] 2026-03-03 08:56:40,576 | INFO     | sum of deviations: -2131263567.000001
[2026-03-03 03:57:16] 2026-03-03 08:56:40,576 | INFO     | mean x: 1772525824.0
[2026-03-03 03:57:16] 2026-03-03 08:56:40,576 | INFO     | mean y: 2764504.835616438
[2026-03-03 03:57:16] 2026-03-03 08:56:40,576 | INFO     | intersect: 31325828071.508232
[2026-03-03 03:57:16] 2026-03-03 08:56:40,576 | INFO     | chi2: 0.25806190838295767
[2026-03-03 03:57:16] 2026-03-03 08:56:40,576 | INFO     | current memory leak: -17.67 B/s (using 73 data points, chi2=0.26)
[2026-03-03 03:57:16] 2026-03-03 08:56:40,577 | INFO     | could have reported an average CPU frequency of 2543 MHz (6 samples)
[2026-03-03 03:57:16] 2026-03-03 08:56:40,577 | INFO     | ..............................
[2026-03-03 03:57:16] 2026-03-03 08:56:40,577 | INFO     | . Timing measurements:
[2026-03-03 03:57:16] 2026-03-03 08:56:40,577 | INFO     | . get job = 0 s
[2026-03-03 03:57:16] 2026-03-03 08:56:40,577 | INFO     | . initial setup = 6 s
[2026-03-03 03:57:16] 2026-03-03 08:56:40,577 | INFO     | . payload setup = 4 s
[2026-03-03 03:57:16] 2026-03-03 08:56:40,577 | INFO     | . stage-in = 0 s
[2026-03-03 03:57:16] 2026-03-03 08:56:40,577 | INFO     | . payload execution = 4873 s
[2026-03-03 03:57:16] 2026-03-03 08:56:40,577 | INFO     | . stage-out = 0 s
[2026-03-03 03:57:16] 2026-03-03 08:56:40,578 | INFO     | . log creation = 0 s
[2026-03-03 03:57:16] 2026-03-03 08:56:40,578 | INFO     | ..............................
[2026-03-03 03:57:16] 2026-03-03 08:56:40,664 | INFO     | 
[2026-03-03 03:57:16] 2026-03-03 08:56:40,664 | INFO     | job summary report
[2026-03-03 03:57:16] 2026-03-03 08:56:40,664 | INFO     | --------------------------------------------------
[2026-03-03 03:57:16] 2026-03-03 08:56:40,664 | INFO     | PanDA job id: 7036032493
[2026-03-03 03:57:16] 2026-03-03 08:56:40,664 | INFO     | task id: 48850875
[2026-03-03 03:57:16] 2026-03-03 08:56:40,664 | INFO     | errors: (none)
[2026-03-03 03:57:16] 2026-03-03 08:56:40,665 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 03:57:16] 2026-03-03 08:56:40,665 | INFO     | pilot state: finished 
[2026-03-03 03:57:16] 2026-03-03 08:56:40,665 | INFO     | transexitcode: 0
[2026-03-03 03:57:16] 2026-03-03 08:56:40,665 | INFO     | exeerrorcode: 0
[2026-03-03 03:57:16] 2026-03-03 08:56:40,665 | INFO     | exeerrordiag: 
[2026-03-03 03:57:16] 2026-03-03 08:56:40,665 | INFO     | exitcode: 0
[2026-03-03 03:57:16] 2026-03-03 08:56:40,665 | INFO     | exitmsg: OK
[2026-03-03 03:57:16] 2026-03-03 08:56:40,665 | INFO     | cpuconsumptiontime: 52145 s
[2026-03-03 03:57:16] 2026-03-03 08:56:40,665 | INFO     | nevents: 400
[2026-03-03 03:57:16] 2026-03-03 08:56:40,666 | INFO     | neventsw: 0
[2026-03-03 03:57:16] 2026-03-03 08:56:40,666 | INFO     | pid: 659882
[2026-03-03 03:57:16] 2026-03-03 08:56:40,666 | INFO     | pgrp: 659882
[2026-03-03 03:57:16] 2026-03-03 08:56:40,666 | INFO     | corecount: 12
[2026-03-03 03:57:16] 2026-03-03 08:56:40,666 | INFO     | event service: False
[2026-03-03 03:57:16] 2026-03-03 08:56:40,666 | INFO     | sizes: {0: 2282120, 1: 2282382, 11: 2282410, 4881: 2308729, 4883: 2317741, 4885: 2318119}
[2026-03-03 03:57:16] 2026-03-03 08:56:40,666 | INFO     | --------------------------------------------------
[2026-03-03 03:57:16] 2026-03-03 08:56:40,666 | INFO     | 
[2026-03-03 03:57:16] 2026-03-03 08:56:40,666 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-03-03 03:57:16] 2026-03-03 08:56:40,688 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,688 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,688 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,688 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,688 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,689 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,689 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,689 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,689 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,689 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,689 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,689 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,689 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,689 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,689 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,690 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,690 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,690 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 03:57:16] 2026-03-03 08:56:40,690 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,690 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 03:57:16] 2026-03-03 08:56:40,690 | INFO     | job 7036032493 has completed (purged errors)
[2026-03-03 03:57:16] 2026-03-03 08:56:40,691 | INFO     | overall cleanup function is called
[2026-03-03 03:57:16] 2026-03-03 08:56:41,694 | INFO     | --- collectZombieJob: --- 10, [659882]
[2026-03-03 03:57:16] 2026-03-03 08:56:41,695 | INFO     | zombie collector waiting for pid 659882
[2026-03-03 03:57:16] 2026-03-03 08:56:41,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 03:57:16] 2026-03-03 08:56:41,695 | INFO     | collected zombie processes
[2026-03-03 03:57:16] 2026-03-03 08:56:41,695 | INFO     | will attempt to kill all subprocesses of pid=659882
[2026-03-03 03:57:16] 2026-03-03 08:56:41,833 | INFO     | process IDs to be killed: [659882] (in reverse order)
[2026-03-03 03:57:16] 2026-03-03 08:56:41,886 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 03:57:16] 2026-03-03 08:56:41,886 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 03:57:16] 2026-03-03 08:56:41,892 | INFO     | did not find any defunct processes belonging to 659882
[2026-03-03 03:57:16] 2026-03-03 08:56:41,898 | INFO     | did not find any defunct processes belonging to 659882
[2026-03-03 03:57:16] 2026-03-03 08:56:41,898 | INFO     | ready for new job
[2026-03-03 03:57:16] 2026-03-03 08:56:41,898 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 03:57:16] 2026-03-03 08:56:41,900 | INFO     | **************************************
[2026-03-03 03:57:16] 2026-03-03 08:56:41,901 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 03:57:16] 2026-03-03 08:56:41,901 | INFO     | **************************************
[2026-03-03 03:57:16] 2026-03-03 08:56:41,901 | INFO     | 
[2026-03-03 03:57:16] 2026-03-03 08:56:41,922 | INFO     | architecture information:
[2026-03-03 03:57:16] 2026-03-03 08:56:41,922 | INFO     | executing command: cat /etc/os-release
[2026-03-03 03:57:16] 2026-03-03 08:56:41,932 | INFO     | cat /etc/os-release:
[2026-03-03 03:57:16] NAME="CentOS Linux"
[2026-03-03 03:57:16] VERSION="7 (Core)"
[2026-03-03 03:57:16] ID="centos"
[2026-03-03 03:57:16] ID_LIKE="rhel fedora"
[2026-03-03 03:57:16] VERSION_ID="7"
[2026-03-03 03:57:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 03:57:16] ANSI_COLOR="0;31"
[2026-03-03 03:57:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 03:57:16] HOME_URL="https://www.centos.org/"
[2026-03-03 03:57:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 03:57:16] 
[2026-03-03 03:57:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 03:57:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 03:57:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 03:57:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 03:57:16] 
[2026-03-03 03:57:16] 2026-03-03 08:56:41,933 | INFO     | **************************************
[2026-03-03 03:57:16] 2026-03-03 08:56:42,436 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-03 03:57:16] 2026-03-03 08:56:42,452 | INFO     | sufficient remaining disk space (399889137664 B)
[2026-03-03 03:57:16] 2026-03-03 08:56:42,452 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 03:57:16] 2026-03-03 08:56:42,453 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 03:57:16] 2026-03-03 08:56:42,453 | INFO     | update_server=False
[2026-03-03 03:57:16] 2026-03-03 08:56:42,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 03:57:16] 2026-03-03 08:56:42,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 03:57:16] 2026-03-03 08:56:42,453 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 03:57:16] 2026-03-03 08:56:42,453 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 03:57:16] 2026-03-03 08:56:42,454 | INFO     | aborting loop
[2026-03-03 03:57:16] 2026-03-03 08:56:42,498 | INFO     | all payload control threads have been joined
[2026-03-03 03:57:16] 2026-03-03 08:56:42,564 | INFO     | all data control threads have been joined
[2026-03-03 03:57:16] 2026-03-03 08:56:43,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 03:57:16] 2026-03-03 08:56:43,458 | INFO     | [job] retrieve thread has finished
[2026-03-03 03:57:16] 2026-03-03 08:56:43,459 | INFO     | [job] queue monitor thread has finished
[2026-03-03 03:57:16] 2026-03-03 08:56:43,460 | INFO     | [job] job monitor thread has finished
[2026-03-03 03:57:16] 2026-03-03 08:56:43,502 | INFO     | [payload] control thread has finished
[2026-03-03 03:57:16] 2026-03-03 08:56:43,546 | INFO     | [payload] validate_post thread has finished
[2026-03-03 03:57:16] 2026-03-03 08:56:43,570 | INFO     | [data] control thread has finished
[2026-03-03 03:57:16] 2026-03-03 08:56:44,027 | INFO     | all job control threads have been joined
[2026-03-03 03:57:16] 2026-03-03 08:56:44,080 | INFO     | [payload] failed_post thread has finished
[2026-03-03 03:57:16] 2026-03-03 08:56:44,359 | INFO     | [job] validate thread has finished
[2026-03-03 03:57:16] 2026-03-03 08:56:44,548 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 03:57:16] 2026-03-03 08:56:44,595 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 03:57:16] 2026-03-03 08:56:44,758 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 03:57:16] 2026-03-03 08:56:44,941 | INFO     | [data] copytool_in thread has finished
[2026-03-03 03:57:16] 2026-03-03 08:56:45,032 | INFO     | [job] control thread has finished
[2026-03-03 03:57:16] 2026-03-03 08:56:45,279 | INFO     | [data] copytool_out thread has finished
[2026-03-03 03:57:16] 2026-03-03 08:56:46,459 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 03:57:16] 2026-03-03 08:56:52,911 | INFO     | job.realtimelogging is not enabled
[2026-03-03 03:57:16] 2026-03-03 08:56:53,917 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 03:57:16] 2026-03-03 08:57:11,562 | INFO     | [monitor] cgroup control has ended
[2026-03-03 03:57:16] 2026-03-03 08:57:11,598 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140029102774080)>', '<ExcThread(monitor, started 140028525135616)>']
[2026-03-03 03:57:16] 2026-03-03 08:57:12,118 | INFO     | PID=655090 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-03 03:57:16] 2026-03-03 08:57:12,118 | INFO     | .. there are 4 such processes running
[2026-03-03 03:57:16] 2026-03-03 08:57:12,119 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 03:57:16] 2026-03-03 08:57:12,119 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 03:57:16] 2026-03-03 08:57:12,119 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 03:57:16] 2026-03-03 08:57:12,119 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 03:57:16] 2026-03-03 08:57:12,119 | INFO     | [monitor] control thread has ended
[2026-03-03 03:57:16] 2026-03-03 08:57:16,623 | INFO     | all workflow threads have been joined
[2026-03-03 03:57:16] 2026-03-03 08:57:16,624 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 03:57:16] 2026-03-03 08:57:16,624 | INFO     | traces error code: 0
[2026-03-03 03:57:16] 2026-03-03 08:57:16,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 03:57:16] 2026-03-03 08:57:16,708 [wrapper] ==== pilot stdout END ====
[2026-03-03 03:57:16] 2026-03-03 08:57:16,711 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 03:57:16] 2026-03-03 08:57:16,713 [wrapper] pilotpid: 655090
[2026-03-03 03:57:16] 2026-03-03 08:57:16,715 [wrapper] Pilot exit status: 0
[2026-03-03 03:57:16] 2026-03-03 08:57:16,724 [wrapper] pandaids: 7036032493
[2026-03-03 03:57:16] 2026-03-03 08:57:16,768 [wrapper] cleanup supervisor_pilot  693431 655091
[2026-03-03 03:57:16] 2026-03-03 08:57:16,771 [wrapper] Test setup, not cleaning
[2026-03-03 03:57:16] 2026-03-03 08:57:16,774 [wrapper] apfmon messages muted
[2026-03-03 03:57:16] 2026-03-03 08:57:16,777 [wrapper] ==== wrapper stdout END ====
[2026-03-03 03:57:16] 2026-03-03 08:57:16,779 [wrapper] ==== wrapper stderr END ====
[2026-03-03 03:57:16]  *** Error codes and diagnostics ***
[2026-03-03 03:57:16]     "exeErrorCode": 0,
[2026-03-03 03:57:16]     "exeErrorDiag": "",
[2026-03-03 03:57:16]     "pilotErrorCode": 0,
[2026-03-03 03:57:16]     "pilotErrorDiag": "",
[2026-03-03 03:57:16]  *** Listing of results directory ***
[2026-03-03 03:57:16] total 447396
[2026-03-03 03:57:16] -rw-r--r-- 1 boinc boinc    584627 Mar  2 09:48 pilot3.tar.gz
[2026-03-03 03:57:16] -rwx------ 1 boinc boinc     36322 Mar  2 10:01 runpilot2-wrapper.sh
[2026-03-03 03:57:16] -rw-r--r-- 1 boinc boinc      5111 Mar  2 10:01 queuedata.json
[2026-03-03 03:57:16] -rw-r--r-- 1 boinc boinc       100 Mar  3 02:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 03:57:16] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 02:34 run_atlas
[2026-03-03 03:57:16] -rw-r--r-- 1 boinc boinc       105 Mar  3 02:34 job.xml
[2026-03-03 03:57:16] -rw-r--r-- 2 boinc boinc 247972227 Mar  3 02:34 EVNT.48459393._000002.pool.root.1
[2026-03-03 03:57:16] -rw-r--r-- 2 boinc boinc     15845 Mar  3 02:34 start_atlas.sh
[2026-03-03 03:57:16] drwxrwx--x 2 boinc boinc      4096 Mar  3 02:34 shared
[2026-03-03 03:57:16] -rw-r--r-- 2 boinc boinc    597984 Mar  3 02:34 input.tar.gz
[2026-03-03 03:57:16] -rw-r--r-- 1 boinc boinc      7579 Mar  3 02:34 init_data.xml
[2026-03-03 03:57:16] -rw-r--r-- 1 boinc boinc         0 Mar  3 02:34 boinc_lockfile
[2026-03-03 03:57:16] -rw-r--r-- 1 boinc boinc      2645 Mar  3 02:34 pandaJob.out
[2026-03-03 03:57:16] -rw------- 1 boinc boinc        50 Mar  3 02:34 setup.sh.local
[2026-03-03 03:57:16] -rw------- 1 boinc boinc    998412 Mar  3 02:34 agis_schedconf.cvmfs.json
[2026-03-03 03:57:16] -rw------- 1 boinc boinc   1512931 Mar  3 02:34 agis_ddmendpoints.agis.ALL.json
[2026-03-03 03:57:16] -rw------- 1 boinc boinc       430 Mar  3 02:35 workernode_map.json
[2026-03-03 03:57:16] drwx------ 5 boinc boinc      4096 Mar  3 02:35 pilot3
[2026-03-03 03:57:16] -rw------- 1 boinc boinc 204009232 Mar  3 03:56 HITS.48850875._000033.pool.root.1
[2026-03-03 03:57:16] -rw-r--r-- 1 boinc boinc       529 Mar  3 03:56 boinc_task_state.xml
[2026-03-03 03:57:16] -rw------- 1 boinc boinc      1028 Mar  3 03:56 memory_monitor_summary.json
[2026-03-03 03:57:16] -rw------- 1 boinc boinc    383593 Mar  3 03:56 log.48850875._000033.job.log.tgz.1
[2026-03-03 03:57:16] -rw------- 1 boinc boinc      6328 Mar  3 03:56 heartbeat.json
[2026-03-03 03:57:16] -rw------- 1 boinc boinc        95 Mar  3 03:57 pilot_heartbeat.json
[2026-03-03 03:57:16] -rw-r--r-- 1 boinc boinc      8192 Mar  3 03:57 boinc_mmap_file
[2026-03-03 03:57:16] -rw-r--r-- 1 boinc boinc        27 Mar  3 03:57 wrapper_checkpoint.txt
[2026-03-03 03:57:16] -rw------- 1 boinc boinc      4898 Mar  3 03:57 pilotlog.txt
[2026-03-03 03:57:16] -rw------- 1 boinc boinc    727097 Mar  3 03:57 log.48850875._000033.job.log.1
[2026-03-03 03:57:16] -rw------- 1 boinc boinc       357 Mar  3 03:57 output.list
[2026-03-03 03:57:16] -rw-r--r-- 1 boinc boinc       620 Mar  3 03:57 runtime_log
[2026-03-03 03:57:16] -rw------- 1 boinc boinc   1126400 Mar  3 03:57 result.tar.gz
[2026-03-03 03:57:16] -rw-r--r-- 1 boinc boinc      9403 Mar  3 03:57 runtime_log.err
[2026-03-03 03:57:16] -rw------- 1 boinc boinc       650 Mar  3 03:57 4TlMDmTxJH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmsoBLDmplsjin.diag
[2026-03-03 03:57:16] -rw-r--r-- 1 boinc boinc     21108 Mar  3 03:57 stderr.txt
[2026-03-03 03:57:16] HITS file was successfully produced:
[2026-03-03 03:57:16] -rw------- 1 boinc boinc 204009232 Mar  3 03:56 shared/HITS.pool.root.1
[2026-03-03 03:57:16]  *** Contents of shared directory: ***
[2026-03-03 03:57:16] total 443100
[2026-03-03 03:57:16] -rw-r--r-- 2 boinc boinc 247972227 Mar  3 02:34 ATLAS.root_0
[2026-03-03 03:57:16] -rw-r--r-- 2 boinc boinc     15845 Mar  3 02:34 start_atlas.sh
[2026-03-03 03:57:16] -rw-r--r-- 2 boinc boinc    597984 Mar  3 02:34 input.tar.gz
[2026-03-03 03:57:16] -rw------- 1 boinc boinc 204009232 Mar  3 03:56 HITS.pool.root.1
[2026-03-03 03:57:16] -rw------- 1 boinc boinc   1126400 Mar  3 03:57 result.tar.gz
03:57:18 (650733): run_atlas exited; CPU time 52241.937909
03:57:18 (650733): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN