Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:45:11 (3433687): wrapper (7.7.26015): starting
03:45:11 (3433687): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 03:45:11] Arguments: --nthreads 4
[2026-03-04 03:45:11] Threads: 4
[2026-03-04 03:45:11] Checking for CVMFS
[2026-03-04 03:45:11] No cvmfs_config command found, will try listing directly
[2026-03-04 03:45:11] CVMFS is ok
[2026-03-04 03:45:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 03:45:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 03:45:11] Further information can be found at the LHC@home message board.
[2026-03-04 03:45:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 03:45:11] Checking for apptainer binary...
[2026-03-04 03:45:11] which: no apptainer in ((null))
[2026-03-04 03:45:11] apptainer is not installed, using version from CVMFS
[2026-03-04 03:45:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 03:45:12] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-04 03:45:12] apptainer works
[2026-03-04 03:45:12] Set ATHENA_PROC_NUMBER=4
[2026-03-04 03:45:12] Set ATHENA_CORE_NUMBER=4
[2026-03-04 03:45:12] Starting ATLAS job with PandaID=7036016729
[2026-03-04 03:45:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 06:06:31]  *** The last 200 lines of the pilot log: ***
[2026-03-04 06:06:31] 2026-03-04 05:04:55,684 | INFO     | job 7036016729 has state=finished
[2026-03-04 06:06:31] 2026-03-04 05:04:55,684 | INFO     | preparing for final server update for job 7036016729 in state='finished'
[2026-03-04 06:06:31] 2026-03-04 05:04:55,684 | INFO     | reading metadata from: /var/lib/boinc/var/slot216/slots/0/PanDA_Pilot-7036016729/jobReport.json
[2026-03-04 06:06:31] 2026-03-04 05:04:55,685 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot216/slots/0/workernode_map.json
[2026-03-04 06:06:31] 2026-03-04 05:04:55,686 | INFO     | this job has now completed (state=finished)
[2026-03-04 06:06:31] 2026-03-04 05:04:55,686 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 06:06:31] 2026-03-04 05:04:55,686 | INFO     | log transfer has been attempted: DONE
[2026-03-04 06:06:31] 2026-03-04 05:04:55,686 | INFO     | job 7036016729 has finished - writing final server update
[2026-03-04 06:06:31] 2026-03-04 05:04:55,686 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_499796/.job.ad'
[2026-03-04 06:06:31] 2026-03-04 05:04:55,686 | INFO     | total number of processed events: 400 (read)
[2026-03-04 06:06:31] 2026-03-04 05:04:55,708 | INFO     | using path: /var/lib/boinc/var/slot216/slots/0/PanDA_Pilot-7036016729/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 06:06:31] 2026-03-04 05:04:55,709 | INFO     | extracted standard info from prmon json
[2026-03-04 06:06:31] 2026-03-04 05:04:55,709 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 06:06:31] 2026-03-04 05:04:55,709 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 06:06:31] 2026-03-04 05:04:55,709 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 06:06:31] 2026-03-04 05:04:55,709 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 06:06:31] 2026-03-04 05:04:55,711 | INFO     | fitting pss+swap vs Time
[2026-03-04 06:06:31] 2026-03-04 05:04:55,711 | INFO     | sum of square deviations: 797291228.0
[2026-03-04 06:06:31] 2026-03-04 05:04:55,711 | INFO     | sum of deviations: 15222474421.0
[2026-03-04 06:06:31] 2026-03-04 05:04:55,711 | INFO     | mean x: 1772596496.0
[2026-03-04 06:06:31] 2026-03-04 05:04:55,711 | INFO     | mean y: 2326410.5474452553
[2026-03-04 06:06:31] 2026-03-04 05:04:55,711 | INFO     | intersect: -33841398280.61927
[2026-03-04 06:06:31] 2026-03-04 05:04:55,711 | INFO     | chi2: 1.106600366962433
[2026-03-04 06:06:31] 2026-03-04 05:04:55,711 | INFO     | sum of square deviations: 713140813.0
[2026-03-04 06:06:31] 2026-03-04 05:04:55,712 | INFO     | sum of deviations: 14569381123.5
[2026-03-04 06:06:31] 2026-03-04 05:04:55,712 | INFO     | mean x: 1772596343.5
[2026-03-04 06:06:31] 2026-03-04 05:04:55,712 | INFO     | mean y: 2325226.446969697
[2026-03-04 06:06:31] 2026-03-04 05:04:55,712 | INFO     | intersect: -36211605088.28601
[2026-03-04 06:06:31] 2026-03-04 05:04:55,712 | INFO     | chi2: 1.107642388521977
[2026-03-04 06:06:31] 2026-03-04 05:04:55,712 | INFO     | current chi2=1.107642388521977 (change=-0.09416421597658046 %)
[2026-03-04 06:06:31] 2026-03-04 05:04:55,712 | INFO     | right removable region: 131
[2026-03-04 06:06:31] 2026-03-04 05:04:55,712 | INFO     | sum of square deviations: 713140813.0
[2026-03-04 06:06:31] 2026-03-04 05:04:55,712 | INFO     | sum of deviations: 1361540099.5000005
[2026-03-04 06:06:31] 2026-03-04 05:04:55,713 | INFO     | mean x: 1772596648.5
[2026-03-04 06:06:31] 2026-03-04 05:04:55,713 | INFO     | mean y: 2350983.6136363638
[2026-03-04 06:06:31] 2026-03-04 05:04:55,713 | INFO     | intersect: -3381919518.3356853
[2026-03-04 06:06:31] 2026-03-04 05:04:55,713 | INFO     | chi2: 0.001072259212711136
[2026-03-04 06:06:31] 2026-03-04 05:04:55,713 | INFO     | current chi2=0.001072259212711136 (change=99.90310330226491 %)
[2026-03-04 06:06:31] 2026-03-04 05:04:55,713 | INFO     | sum of square deviations: 635130048.0
[2026-03-04 06:06:31] 2026-03-04 05:04:55,713 | INFO     | sum of deviations: 964963696.9999998
[2026-03-04 06:06:31] 2026-03-04 05:04:55,713 | INFO     | mean x: 1772596801.0
[2026-03-04 06:06:31] 2026-03-04 05:04:55,713 | INFO     | mean y: 2351753.0472440943
[2026-03-04 06:06:31] 2026-03-04 05:04:55,713 | INFO     | intersect: -2690784192.5273747
[2026-03-04 06:06:31] 2026-03-04 05:04:55,713 | INFO     | chi2: 0.0008592879465852457
[2026-03-04 06:06:31] 2026-03-04 05:04:55,713 | INFO     | current chi2=0.0008592879465852457 (change=19.861919916491704 %)
[2026-03-04 06:06:31] 2026-03-04 05:04:55,713 | INFO     | left removable region: 20
[2026-03-04 06:06:31] 2026-03-04 05:04:55,714 | INFO     | sum of square deviations: 424045160.0
[2026-03-04 06:06:31] 2026-03-04 05:04:55,714 | INFO     | sum of deviations: 1122277024.0
[2026-03-04 06:06:31] 2026-03-04 05:04:55,714 | INFO     | mean x: 1772596923.0
[2026-03-04 06:06:31] 2026-03-04 05:04:55,714 | INFO     | mean y: 2350720.4234234234
[2026-03-04 06:06:31] 2026-03-04 05:04:55,714 | INFO     | intersect: -4689000548.615933
[2026-03-04 06:06:31] 2026-03-04 05:04:55,714 | INFO     | chi2: 0.00035902058817102457
[2026-03-04 06:06:31] 2026-03-04 05:04:55,714 | INFO     | current memory leak: 2.65 B/s (using 111 data points, chi2=0.00)
[2026-03-04 06:06:31] 2026-03-04 05:04:55,714 | INFO     | could have reported an average CPU frequency of 3572 MHz (8 samples)
[2026-03-04 06:06:31] 2026-03-04 05:04:55,714 | INFO     | ..............................
[2026-03-04 06:06:31] 2026-03-04 05:04:55,714 | INFO     | . Timing measurements:
[2026-03-04 06:06:31] 2026-03-04 05:04:55,714 | INFO     | . get job = 0 s
[2026-03-04 06:06:31] 2026-03-04 05:04:55,714 | INFO     | . initial setup = 5 s
[2026-03-04 06:06:31] 2026-03-04 05:04:55,714 | INFO     | . payload setup = 5 s
[2026-03-04 06:06:31] 2026-03-04 05:04:55,714 | INFO     | . stage-in = 0 s
[2026-03-04 06:06:31] 2026-03-04 05:04:55,714 | INFO     | . payload execution = 8343 s
[2026-03-04 06:06:31] 2026-03-04 05:04:55,714 | INFO     | . stage-out = 0 s
[2026-03-04 06:06:31] 2026-03-04 05:04:55,715 | INFO     | . log creation = 0 s
[2026-03-04 06:06:31] 2026-03-04 05:04:55,715 | INFO     | ..............................
[2026-03-04 06:06:31] 2026-03-04 05:04:55,762 | INFO     | 
[2026-03-04 06:06:31] 2026-03-04 05:04:55,762 | INFO     | job summary report
[2026-03-04 06:06:31] 2026-03-04 05:04:55,762 | INFO     | --------------------------------------------------
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | PanDA job id: 7036016729
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | task id: 48847032
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | errors: (none)
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | pilot state: finished 
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | transexitcode: 0
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | exeerrorcode: 0
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | exeerrordiag: 
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | exitcode: 0
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | exitmsg: OK
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | cpuconsumptiontime: 32243 s
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | nevents: 400
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | neventsw: 0
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | pid: 3465123
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | pgrp: 3465123
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | corecount: 4
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | event service: False
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | sizes: {0: 2287149, 11: 2287149, 8352: 2315031, 8353: 2324053, 8357: 2324109, 8358: 2324303}
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | --------------------------------------------------
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | 
[2026-03-04 06:06:31] 2026-03-04 05:04:55,763 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/0
[2026-03-04 06:06:31] 2026-03-04 05:04:55,778 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,778 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | job 7036016729 has completed (purged errors)
[2026-03-04 06:06:31] 2026-03-04 05:04:55,779 | INFO     | overall cleanup function is called
[2026-03-04 06:06:31] 2026-03-04 05:04:56,785 | INFO     | --- collectZombieJob: --- 10, [3465123]
[2026-03-04 06:06:31] 2026-03-04 05:04:56,786 | INFO     | zombie collector waiting for pid 3465123
[2026-03-04 06:06:31] 2026-03-04 05:04:56,786 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 06:06:31] 2026-03-04 05:04:56,786 | INFO     | collected zombie processes
[2026-03-04 06:06:31] 2026-03-04 05:04:56,786 | INFO     | will attempt to kill all subprocesses of pid=3465123
[2026-03-04 06:06:31] 2026-03-04 05:04:57,311 | INFO     | process IDs to be killed: [3465123] (in reverse order)
[2026-03-04 06:06:31] 2026-03-04 05:04:57,583 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 06:06:31] 2026-03-04 05:04:57,584 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 06:06:31] 2026-03-04 05:04:57,615 | INFO     | did not find any defunct processes belonging to 3465123
[2026-03-04 06:06:31] 2026-03-04 05:04:57,646 | INFO     | did not find any defunct processes belonging to 3465123
[2026-03-04 06:06:31] 2026-03-04 05:04:57,647 | INFO     | ready for new job
[2026-03-04 06:06:31] 2026-03-04 05:04:57,647 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 06:06:31] 2026-03-04 05:04:57,652 | INFO     | **************************************
[2026-03-04 06:06:31] 2026-03-04 05:04:57,652 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 06:06:31] 2026-03-04 05:04:57,652 | INFO     | **************************************
[2026-03-04 06:06:31] 2026-03-04 05:04:57,652 | INFO     | 
[2026-03-04 06:06:31] 2026-03-04 05:04:57,658 | INFO     | architecture information:
[2026-03-04 06:06:31] 2026-03-04 05:04:57,661 | INFO     | executing command: cat /etc/os-release
[2026-03-04 06:06:31] 2026-03-04 05:04:57,686 | INFO     | cat /etc/os-release:
[2026-03-04 06:06:31] NAME="CentOS Linux"
[2026-03-04 06:06:31] VERSION="7 (Core)"
[2026-03-04 06:06:31] ID="centos"
[2026-03-04 06:06:31] ID_LIKE="rhel fedora"
[2026-03-04 06:06:31] VERSION_ID="7"
[2026-03-04 06:06:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 06:06:31] ANSI_COLOR="0;31"
[2026-03-04 06:06:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 06:06:31] HOME_URL="https://www.centos.org/"
[2026-03-04 06:06:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 06:06:31] 
[2026-03-04 06:06:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 06:06:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 06:06:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 06:06:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 06:06:31] 
[2026-03-04 06:06:31] 2026-03-04 05:04:57,686 | INFO     | **************************************
[2026-03-04 06:06:31] 2026-03-04 05:04:58,189 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/0
[2026-03-04 06:06:31] 2026-03-04 05:04:58,203 | INFO     | sufficient remaining disk space (21063794688 B)
[2026-03-04 06:06:31] 2026-03-04 05:04:58,203 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 06:06:31] 2026-03-04 05:04:58,204 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 06:06:31] 2026-03-04 05:04:58,204 | INFO     | update_server=False
[2026-03-04 06:06:31] 2026-03-04 05:04:58,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 06:06:31] 2026-03-04 05:04:58,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 06:06:31] 2026-03-04 05:04:58,204 | INFO     | aborting loop
[2026-03-04 06:06:31] 2026-03-04 05:04:58,647 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 06:06:31] 2026-03-04 05:04:58,771 | INFO     | all data control threads have been joined
[2026-03-04 06:06:31] 2026-03-04 05:04:59,070 | INFO     | all job control threads have been joined
[2026-03-04 06:06:31] 2026-03-04 05:04:59,209 | INFO     | [job] job monitor thread has finished
[2026-03-04 06:06:31] 2026-03-04 05:04:59,209 | INFO     | [job] retrieve thread has finished
[2026-03-04 06:06:31] 2026-03-04 05:04:59,363 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 06:06:31] 2026-03-04 05:04:59,436 | INFO     | all payload control threads have been joined
[2026-03-04 06:06:31] 2026-03-04 05:04:59,466 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 06:06:31] 2026-03-04 05:04:59,631 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 06:06:31] 2026-03-04 05:04:59,776 | INFO     | [data] control thread has finished
[2026-03-04 06:06:31] 2026-03-04 05:04:59,831 | INFO     | [data] copytool_in thread has finished
[2026-03-04 06:06:31] 2026-03-04 05:05:00,075 | INFO     | [job] control thread has finished
[2026-03-04 06:06:31] 2026-03-04 05:05:00,108 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 06:06:31] 2026-03-04 05:05:00,224 | INFO     | [payload] failed_post thread has finished
[2026-03-04 06:06:31] 2026-03-04 05:05:00,297 | INFO     | [payload] validate_post thread has finished
[2026-03-04 06:06:31] 2026-03-04 05:05:00,442 | INFO     | [payload] control thread has finished
[2026-03-04 06:06:31] 2026-03-04 05:05:00,551 | INFO     | [job] validate thread has finished
[2026-03-04 06:06:31] 2026-03-04 05:05:00,652 | INFO     | [data] copytool_out thread has finished
[2026-03-04 06:06:31] 2026-03-04 05:05:00,772 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 06:06:31] 2026-03-04 05:05:01,777 | INFO     | [job] queue monitor thread has finished
[2026-03-04 06:06:31] 2026-03-04 05:05:04,115 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 06:06:31] 2026-03-04 05:05:09,104 | INFO     | job.realtimelogging is not enabled
[2026-03-04 06:06:31] 2026-03-04 05:05:10,109 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 06:06:31] 2026-03-04 05:05:28,570 | INFO     | PID=3446586 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 06:06:31] 2026-03-04 05:05:28,570 | INFO     | .. there are 41 such processes running
[2026-03-04 06:06:31] 2026-03-04 05:05:28,571 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 06:06:31] 2026-03-04 05:05:28,571 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 06:06:31] 2026-03-04 05:05:28,571 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 06:06:31] 2026-03-04 05:05:39,399 | INFO     | [monitor] cgroup control has ended
[2026-03-04 06:06:31] 2026-03-04 05:05:41,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22508383156032)>', '<ExcThread(monitor, started 22508129732352)>']
[2026-03-04 06:06:31] 2026-03-04 05:05:41,643 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 06:06:31] 2026-03-04 05:05:41,644 | INFO     | [monitor] control thread has ended
[2026-03-04 06:06:31] 2026-03-04 05:05:46,080 | INFO     | all workflow threads have been joined
[2026-03-04 06:06:31] 2026-03-04 05:05:46,080 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 06:06:31] 2026-03-04 05:05:46,080 | INFO     | traces error code: 0
[2026-03-04 06:06:31] 2026-03-04 05:05:46,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 06:06:31] 2026-03-04 05:05:46,225 [wrapper] ==== pilot stdout END ====
[2026-03-04 06:06:31] 2026-03-04 05:05:46,227 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 06:06:31] 2026-03-04 05:05:46,230 [wrapper] pilotpid: 3446586
[2026-03-04 06:06:31] 2026-03-04 05:05:46,233 [wrapper] Pilot exit status: 0
[2026-03-04 06:06:31] 2026-03-04 05:05:46,249 [wrapper] pandaids: 7036016729
[2026-03-04 06:06:31] 2026-03-04 05:05:46,405 [wrapper] cleanup supervisor_pilot  234321 3446587
[2026-03-04 06:06:31] 2026-03-04 05:05:46,408 [wrapper] Test setup, not cleaning
[2026-03-04 06:06:31] 2026-03-04 05:05:46,410 [wrapper] apfmon messages muted
[2026-03-04 06:06:31] 2026-03-04 05:05:46,412 [wrapper] ==== wrapper stdout END ====
[2026-03-04 06:06:31] 2026-03-04 05:05:46,414 [wrapper] ==== wrapper stderr END ====
[2026-03-04 06:06:31]  *** Error codes and diagnostics ***
[2026-03-04 06:06:31]     "exeErrorCode": 0,
[2026-03-04 06:06:31]     "exeErrorDiag": "",
[2026-03-04 06:06:31]     "pilotErrorCode": 0,
[2026-03-04 06:06:31]     "pilotErrorDiag": "",
[2026-03-04 06:06:31]  *** Listing of results directory ***
[2026-03-04 06:06:31] total 478944
[2026-03-04 06:06:31] -rw-r--r--. 1 boinc boinc    584627 Mar  2 15:48 pilot3.tar.gz
[2026-03-04 06:06:31] -rwx------. 1 boinc boinc     36322 Mar  2 16:00 runpilot2-wrapper.sh
[2026-03-04 06:06:31] -rw-r--r--. 1 boinc boinc      5111 Mar  2 16:00 queuedata.json
[2026-03-04 06:06:31] -rw-r--r--. 1 boinc boinc       100 Mar  4 03:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 06:06:31] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 03:45 run_atlas
[2026-03-04 06:06:31] -rw-r--r--. 1 boinc boinc       105 Mar  4 03:45 job.xml
[2026-03-04 06:06:31] -rw-r--r--. 1 boinc boinc      6708 Mar  4 03:45 init_data.xml
[2026-03-04 06:06:31] -rw-r--r--. 2 boinc boinc 264138006 Mar  4 03:45 EVNT.48452817._000003.pool.root.1
[2026-03-04 06:06:31] -rw-r--r--. 2 boinc boinc     15845 Mar  4 03:45 start_atlas.sh
[2026-03-04 06:06:31] drwxrwx--x. 2 boinc boinc      4096 Mar  4 03:45 shared
[2026-03-04 06:06:31] -rw-r--r--. 2 boinc boinc    597969 Mar  4 03:45 input.tar.gz
[2026-03-04 06:06:31] -rw-r--r--. 1 boinc boinc         0 Mar  4 03:45 boinc_lockfile
[2026-03-04 06:06:31] -rw-r--r--. 1 boinc boinc      2612 Mar  4 03:45 pandaJob.out
[2026-03-04 06:06:31] -rw-------. 1 boinc boinc    998484 Mar  4 03:45 agis_schedconf.cvmfs.json
[2026-03-04 06:06:31] -rw-------. 1 boinc boinc   1516092 Mar  4 03:45 agis_ddmendpoints.agis.ALL.json
[2026-03-04 06:06:31] -rw-------. 1 boinc boinc       445 Mar  4 03:45 workernode_map.json
[2026-03-04 06:06:31] drwx------. 5 boinc boinc      4096 Mar  4 03:45 pilot3
[2026-03-04 06:06:31] -rw-------. 1 boinc boinc 219332279 Mar  4 06:04 HITS.48847032._000073.pool.root.1
[2026-03-04 06:06:31] -rw-r--r--. 1 boinc boinc       529 Mar  4 06:04 boinc_task_state.xml
[2026-03-04 06:06:31] -rw-------. 1 boinc boinc      1032 Mar  4 06:04 memory_monitor_summary.json
[2026-03-04 06:06:31] -rw-------. 1 boinc boinc    332250 Mar  4 06:04 log.48847032._000073.job.log.tgz.1
[2026-03-04 06:06:31] -rw-------. 1 boinc boinc      6344 Mar  4 06:04 heartbeat.json
[2026-03-04 06:06:31] -rw-------. 1 boinc boinc        95 Mar  4 06:05 pilot_heartbeat.json
[2026-03-04 06:06:31] -rw-------. 1 boinc boinc      4902 Mar  4 06:05 pilotlog.txt
[2026-03-04 06:06:31] -rw-------. 1 boinc boinc   1186895 Mar  4 06:05 log.48847032._000073.job.log.1
[2026-03-04 06:06:31] -rw-------. 1 boinc boinc       357 Mar  4 06:05 output.list
[2026-03-04 06:06:31] -rw-r--r--. 1 boinc boinc       620 Mar  4 06:05 runtime_log
[2026-03-04 06:06:31] -rw-------. 1 boinc boinc   1536000 Mar  4 06:05 result.tar.gz
[2026-03-04 06:06:31] -rw-r--r--. 1 boinc boinc      9221 Mar  4 06:05 runtime_log.err
[2026-03-04 06:06:31] -rw-------. 1 boinc boinc       663 Mar  4 06:05 EgeNDmDwJH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmypDLDmmaqMZn.diag
[2026-03-04 06:06:31] -rw-r--r--. 1 boinc boinc        27 Mar  4 06:06 wrapper_checkpoint.txt
[2026-03-04 06:06:31] -rw-r--r--. 1 boinc boinc      8192 Mar  4 06:06 boinc_mmap_file
[2026-03-04 06:06:31] -rw-r--r--. 1 boinc boinc     21096 Mar  4 06:06 stderr.txt
[2026-03-04 06:06:31] HITS file was successfully produced:
[2026-03-04 06:06:31] -rw-------. 1 boinc boinc 219332279 Mar  4 06:04 shared/HITS.pool.root.1
[2026-03-04 06:06:31]  *** Contents of shared directory: ***
[2026-03-04 06:06:31] total 474248
[2026-03-04 06:06:31] -rw-r--r--. 2 boinc boinc 264138006 Mar  4 03:45 ATLAS.root_0
[2026-03-04 06:06:31] -rw-r--r--. 2 boinc boinc     15845 Mar  4 03:45 start_atlas.sh
[2026-03-04 06:06:31] -rw-r--r--. 2 boinc boinc    597969 Mar  4 03:45 input.tar.gz
[2026-03-04 06:06:31] -rw-------. 1 boinc boinc 219332279 Mar  4 06:04 HITS.pool.root.1
[2026-03-04 06:06:31] -rw-------. 1 boinc boinc   1536000 Mar  4 06:05 result.tar.gz
06:06:33 (3433687): run_atlas exited; CPU time 32655.284163
06:06:33 (3433687): called boinc_finish(0)

</stderr_txt>
]]>

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