Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:20:25 (2886599): wrapper (7.7.26015): starting
13:20:25 (2886599): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 13:20:25] Arguments: --nthreads 4
[2026-03-03 13:20:25] Threads: 4
[2026-03-03 13:20:25] Checking for CVMFS
[2026-03-03 13:20:25] No cvmfs_config command found, will try listing directly
[2026-03-03 13:20:25] CVMFS is ok
[2026-03-03 13:20:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 13:20:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 13:20:25] Further information can be found at the LHC@home message board.
[2026-03-03 13:20:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 13:20:25] Checking for apptainer binary...
[2026-03-03 13:20:25] which: no apptainer in ((null))
[2026-03-03 13:20:25] apptainer is not installed, using version from CVMFS
[2026-03-03 13:20:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 13:20:25] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot196/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-03 13:20:25] apptainer works
[2026-03-03 13:20:25] Set ATHENA_PROC_NUMBER=4
[2026-03-03 13:20:25] Set ATHENA_CORE_NUMBER=4
[2026-03-03 13:20:25] Starting ATLAS job with PandaID=7036016397
[2026-03-03 13:20:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot196/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 15:42:52]  *** The last 200 lines of the pilot log: ***
[2026-03-03 15:42:52] 2026-03-03 14:41:48,839 | INFO     | job 7036016397 has state=finished
[2026-03-03 15:42:52] 2026-03-03 14:41:48,839 | INFO     | preparing for final server update for job 7036016397 in state='finished'
[2026-03-03 15:42:52] 2026-03-03 14:41:48,839 | INFO     | reading metadata from: /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7036016397/jobReport.json
[2026-03-03 15:42:52] 2026-03-03 14:41:48,841 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot196/slots/0/workernode_map.json
[2026-03-03 15:42:52] 2026-03-03 14:41:48,841 | INFO     | this job has now completed (state=finished)
[2026-03-03 15:42:52] 2026-03-03 14:41:48,841 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 15:42:52] 2026-03-03 14:41:48,841 | INFO     | log transfer has been attempted: DONE
[2026-03-03 15:42:52] 2026-03-03 14:41:48,841 | INFO     | job 7036016397 has finished - writing final server update
[2026-03-03 15:42:52] 2026-03-03 14:41:48,841 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_16301/.job.ad'
[2026-03-03 15:42:52] 2026-03-03 14:41:48,842 | INFO     | total number of processed events: 400 (read)
[2026-03-03 15:42:52] 2026-03-03 14:41:48,859 | INFO     | using path: /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7036016397/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 15:42:52] 2026-03-03 14:41:48,859 | INFO     | extracted standard info from prmon json
[2026-03-03 15:42:52] 2026-03-03 14:41:48,859 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 15:42:52] 2026-03-03 14:41:48,859 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 15:42:52] 2026-03-03 14:41:48,859 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 15:42:52] 2026-03-03 14:41:48,859 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 15:42:52] 2026-03-03 14:41:48,861 | INFO     | fitting pss+swap vs Time
[2026-03-03 15:42:52] 2026-03-03 14:41:48,861 | INFO     | sum of square deviations: 832722590.0
[2026-03-03 15:42:52] 2026-03-03 14:41:48,862 | INFO     | sum of deviations: 11647497624.0
[2026-03-03 15:42:52] 2026-03-03 14:41:48,862 | INFO     | mean x: 1772544664.0
[2026-03-03 15:42:52] 2026-03-03 14:41:48,862 | INFO     | mean y: 2342484.8992805756
[2026-03-03 15:42:52] 2026-03-03 14:41:48,862 | INFO     | intersect: -24790679837.665405
[2026-03-03 15:42:52] 2026-03-03 14:41:48,862 | INFO     | chi2: 1.0949559595583844
[2026-03-03 15:42:52] 2026-03-03 14:41:48,862 | INFO     | sum of square deviations: 746051197.5
[2026-03-03 15:42:52] 2026-03-03 14:41:48,862 | INFO     | sum of deviations: 11226494167.999998
[2026-03-03 15:42:52] 2026-03-03 14:41:48,862 | INFO     | mean x: 1772544511.5
[2026-03-03 15:42:52] 2026-03-03 14:41:48,862 | INFO     | mean y: 2341743.805970149
[2026-03-03 15:42:52] 2026-03-03 14:41:48,862 | INFO     | intersect: -26670707890.800583
[2026-03-03 15:42:52] 2026-03-03 14:41:48,863 | INFO     | chi2: 1.0961009628387088
[2026-03-03 15:42:52] 2026-03-03 14:41:48,863 | INFO     | current chi2=1.0961009628387088 (change=-0.1045707154090662 %)
[2026-03-03 15:42:52] 2026-03-03 14:41:48,863 | INFO     | right removable region: 133
[2026-03-03 15:42:52] 2026-03-03 14:41:48,863 | INFO     | sum of square deviations: 746051197.5
[2026-03-03 15:42:52] 2026-03-03 14:41:48,863 | INFO     | sum of deviations: -1560318024.0
[2026-03-03 15:42:52] 2026-03-03 14:41:48,863 | INFO     | mean x: 1772544816.5
[2026-03-03 15:42:52] 2026-03-03 14:41:48,863 | INFO     | mean y: 2365174.268656716
[2026-03-03 15:42:52] 2026-03-03 14:41:48,863 | INFO     | intersect: 3709528482.632253
[2026-03-03 15:42:52] 2026-03-03 14:41:48,863 | INFO     | chi2: 0.001383684500563615
[2026-03-03 15:42:52] 2026-03-03 14:41:48,863 | INFO     | current chi2=0.001383684500563615 (change=99.87363103616316 %)
[2026-03-03 15:42:52] 2026-03-03 14:41:48,863 | INFO     | sum of square deviations: 665612480.0
[2026-03-03 15:42:52] 2026-03-03 14:41:48,864 | INFO     | sum of deviations: -1541787992.9999998
[2026-03-03 15:42:52] 2026-03-03 14:41:48,864 | INFO     | mean x: 1772544969.0
[2026-03-03 15:42:52] 2026-03-03 14:41:48,864 | INFO     | mean y: 2365129.7519379845
[2026-03-03 15:42:52] 2026-03-03 14:41:48,864 | INFO     | intersect: 4108190414.543408
[2026-03-03 15:42:52] 2026-03-03 14:41:48,864 | INFO     | chi2: 0.0011461965801581651
[2026-03-03 15:42:52] 2026-03-03 14:41:48,864 | INFO     | current chi2=0.0011461965801581651 (change=17.16344443467525 %)
[2026-03-03 15:42:52] 2026-03-03 14:41:48,864 | INFO     | left removable region: 20
[2026-03-03 15:42:52] 2026-03-03 14:41:48,864 | INFO     | sum of square deviations: 447383272.0
[2026-03-03 15:42:52] 2026-03-03 14:41:48,865 | INFO     | sum of deviations: -715919546.0
[2026-03-03 15:42:52] 2026-03-03 14:41:48,865 | INFO     | mean x: 1772545091.0
[2026-03-03 15:42:52] 2026-03-03 14:41:48,865 | INFO     | mean y: 2363487.1592920353
[2026-03-03 15:42:52] 2026-03-03 14:41:48,865 | INFO     | intersect: 2838856839.1352434
[2026-03-03 15:42:52] 2026-03-03 14:41:48,865 | INFO     | chi2: 0.0007638102913012798
[2026-03-03 15:42:52] 2026-03-03 14:41:48,865 | INFO     | current memory leak: -1.60 B/s (using 113 data points, chi2=0.00)
[2026-03-03 15:42:52] 2026-03-03 14:41:48,865 | INFO     | could have reported an average CPU frequency of 3641 MHz (8 samples)
[2026-03-03 15:42:52] 2026-03-03 14:41:48,865 | INFO     | ..............................
[2026-03-03 15:42:52] 2026-03-03 14:41:48,865 | INFO     | . Timing measurements:
[2026-03-03 15:42:52] 2026-03-03 14:41:48,865 | INFO     | . get job = 0 s
[2026-03-03 15:42:52] 2026-03-03 14:41:48,865 | INFO     | . initial setup = 4 s
[2026-03-03 15:42:52] 2026-03-03 14:41:48,865 | INFO     | . payload setup = 4 s
[2026-03-03 15:42:52] 2026-03-03 14:41:48,865 | INFO     | . stage-in = 0 s
[2026-03-03 15:42:52] 2026-03-03 14:41:48,865 | INFO     | . payload execution = 8452 s
[2026-03-03 15:42:52] 2026-03-03 14:41:48,865 | INFO     | . stage-out = 0 s
[2026-03-03 15:42:52] 2026-03-03 14:41:48,865 | INFO     | . log creation = 0 s
[2026-03-03 15:42:52] 2026-03-03 14:41:48,865 | INFO     | ..............................
[2026-03-03 15:42:52] 2026-03-03 14:41:48,914 | INFO     | 
[2026-03-03 15:42:52] 2026-03-03 14:41:48,914 | INFO     | job summary report
[2026-03-03 15:42:52] 2026-03-03 14:41:48,914 | INFO     | --------------------------------------------------
[2026-03-03 15:42:52] 2026-03-03 14:41:48,914 | INFO     | PanDA job id: 7036016397
[2026-03-03 15:42:52] 2026-03-03 14:41:48,914 | INFO     | task id: 48846818
[2026-03-03 15:42:52] 2026-03-03 14:41:48,914 | INFO     | errors: (none)
[2026-03-03 15:42:52] 2026-03-03 14:41:48,914 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 15:42:52] 2026-03-03 14:41:48,914 | INFO     | pilot state: finished 
[2026-03-03 15:42:52] 2026-03-03 14:41:48,914 | INFO     | transexitcode: 0
[2026-03-03 15:42:52] 2026-03-03 14:41:48,914 | INFO     | exeerrorcode: 0
[2026-03-03 15:42:52] 2026-03-03 14:41:48,915 | INFO     | exeerrordiag: 
[2026-03-03 15:42:52] 2026-03-03 14:41:48,915 | INFO     | exitcode: 0
[2026-03-03 15:42:52] 2026-03-03 14:41:48,915 | INFO     | exitmsg: OK
[2026-03-03 15:42:52] 2026-03-03 14:41:48,915 | INFO     | cpuconsumptiontime: 32880 s
[2026-03-03 15:42:52] 2026-03-03 14:41:48,915 | INFO     | nevents: 400
[2026-03-03 15:42:52] 2026-03-03 14:41:48,915 | INFO     | neventsw: 0
[2026-03-03 15:42:52] 2026-03-03 14:41:48,915 | INFO     | pid: 2896987
[2026-03-03 15:42:52] 2026-03-03 14:41:48,915 | INFO     | pgrp: 2896987
[2026-03-03 15:42:52] 2026-03-03 14:41:48,915 | INFO     | corecount: 4
[2026-03-03 15:42:52] 2026-03-03 14:41:48,915 | INFO     | event service: False
[2026-03-03 15:42:52] 2026-03-03 14:41:48,915 | INFO     | sizes: {0: 2286733, 1: 2287194, 11: 2287194, 8461: 2315132, 8462: 2324210, 8463: 2324348}
[2026-03-03 15:42:52] 2026-03-03 14:41:48,915 | INFO     | --------------------------------------------------
[2026-03-03 15:42:52] 2026-03-03 14:41:48,915 | INFO     | 
[2026-03-03 15:42:52] 2026-03-03 14:41:48,915 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot196/slots/0
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,934 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 15:42:52] 2026-03-03 14:41:48,935 | INFO     | job 7036016397 has completed (purged errors)
[2026-03-03 15:42:52] 2026-03-03 14:41:48,935 | INFO     | overall cleanup function is called
[2026-03-03 15:42:52] 2026-03-03 14:41:49,942 | INFO     | --- collectZombieJob: --- 10, [2896987]
[2026-03-03 15:42:52] 2026-03-03 14:41:49,942 | INFO     | zombie collector waiting for pid 2896987
[2026-03-03 15:42:52] 2026-03-03 14:41:49,942 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 15:42:52] 2026-03-03 14:41:49,942 | INFO     | collected zombie processes
[2026-03-03 15:42:52] 2026-03-03 14:41:49,942 | INFO     | will attempt to kill all subprocesses of pid=2896987
[2026-03-03 15:42:52] 2026-03-03 14:41:50,314 | INFO     | process IDs to be killed: [2896987] (in reverse order)
[2026-03-03 15:42:52] 2026-03-03 14:41:50,496 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 15:42:52] 2026-03-03 14:41:50,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 15:42:52] 2026-03-03 14:41:50,519 | INFO     | did not find any defunct processes belonging to 2896987
[2026-03-03 15:42:52] 2026-03-03 14:41:50,538 | INFO     | did not find any defunct processes belonging to 2896987
[2026-03-03 15:42:52] 2026-03-03 14:41:50,538 | INFO     | ready for new job
[2026-03-03 15:42:52] 2026-03-03 14:41:50,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 15:42:52] 2026-03-03 14:41:50,540 | INFO     | **************************************
[2026-03-03 15:42:52] 2026-03-03 14:41:50,540 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 15:42:52] 2026-03-03 14:41:50,540 | INFO     | **************************************
[2026-03-03 15:42:52] 2026-03-03 14:41:50,540 | INFO     | 
[2026-03-03 15:42:52] 2026-03-03 14:41:50,546 | INFO     | architecture information:
[2026-03-03 15:42:52] 2026-03-03 14:41:50,546 | INFO     | executing command: cat /etc/os-release
[2026-03-03 15:42:52] 2026-03-03 14:41:50,562 | INFO     | cat /etc/os-release:
[2026-03-03 15:42:52] NAME="CentOS Linux"
[2026-03-03 15:42:52] VERSION="7 (Core)"
[2026-03-03 15:42:52] ID="centos"
[2026-03-03 15:42:52] ID_LIKE="rhel fedora"
[2026-03-03 15:42:52] VERSION_ID="7"
[2026-03-03 15:42:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 15:42:52] ANSI_COLOR="0;31"
[2026-03-03 15:42:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 15:42:52] HOME_URL="https://www.centos.org/"
[2026-03-03 15:42:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 15:42:52] 
[2026-03-03 15:42:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 15:42:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 15:42:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 15:42:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 15:42:52] 
[2026-03-03 15:42:52] 2026-03-03 14:41:50,565 | INFO     | **************************************
[2026-03-03 15:42:52] 2026-03-03 14:41:51,068 | INFO     | executing command: df -mP /var/lib/boinc/var/slot196/slots/0
[2026-03-03 15:42:52] 2026-03-03 14:41:51,082 | INFO     | sufficient remaining disk space (24384634880 B)
[2026-03-03 15:42:52] 2026-03-03 14:41:51,082 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 15:42:52] 2026-03-03 14:41:51,082 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 15:42:52] 2026-03-03 14:41:51,082 | INFO     | update_server=False
[2026-03-03 15:42:52] 2026-03-03 14:41:51,082 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 15:42:52] 2026-03-03 14:41:51,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 15:42:52] 2026-03-03 14:41:51,083 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 15:42:52] 2026-03-03 14:41:51,083 | INFO     | aborting loop
[2026-03-03 15:42:52] 2026-03-03 14:41:51,455 | INFO     | all data control threads have been joined
[2026-03-03 15:42:52] 2026-03-03 14:41:51,455 | INFO     | all payload control threads have been joined
[2026-03-03 15:42:52] 2026-03-03 14:41:51,663 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 15:42:52] 2026-03-03 14:41:52,058 | INFO     | all job control threads have been joined
[2026-03-03 15:42:52] 2026-03-03 14:41:52,085 | INFO     | [job] retrieve thread has finished
[2026-03-03 15:42:52] 2026-03-03 14:41:52,089 | INFO     | [job] job monitor thread has finished
[2026-03-03 15:42:52] 2026-03-03 14:41:52,334 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 15:42:52] 2026-03-03 14:41:52,461 | INFO     | [data] control thread has finished
[2026-03-03 15:42:52] 2026-03-03 14:41:52,461 | INFO     | [payload] control thread has finished
[2026-03-03 15:42:52] 2026-03-03 14:41:52,624 | INFO     | [job] validate thread has finished
[2026-03-03 15:42:52] 2026-03-03 14:41:52,652 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 15:42:52] 2026-03-03 14:41:52,751 | INFO     | [payload] validate_post thread has finished
[2026-03-03 15:42:52] 2026-03-03 14:41:52,796 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 15:42:52] 2026-03-03 14:41:52,855 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 15:42:52] 2026-03-03 14:41:53,063 | INFO     | [job] control thread has finished
[2026-03-03 15:42:52] 2026-03-03 14:41:53,145 | INFO     | [data] copytool_in thread has finished
[2026-03-03 15:42:52] 2026-03-03 14:41:53,287 | INFO     | [payload] failed_post thread has finished
[2026-03-03 15:42:52] 2026-03-03 14:41:53,669 | INFO     | [data] copytool_out thread has finished
[2026-03-03 15:42:52] 2026-03-03 14:41:53,925 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 15:42:52] 2026-03-03 14:41:54,931 | INFO     | [job] queue monitor thread has finished
[2026-03-03 15:42:52] 2026-03-03 14:41:55,089 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 15:42:52] 2026-03-03 14:42:19,940 | INFO     | 8478s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-03 15:42:52] 2026-03-03 14:42:21,348 | INFO     | PID=2891137 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 15:42:52] 2026-03-03 14:42:21,348 | INFO     | .. there are 45 such processes running
[2026-03-03 15:42:52] 2026-03-03 14:42:21,348 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 15:42:52] 2026-03-03 14:42:21,348 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 15:42:52] 2026-03-03 14:42:21,348 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 15:42:52] 2026-03-03 14:42:47,242 | INFO     | [monitor] cgroup control has ended
[2026-03-03 15:42:52] 2026-03-03 14:42:47,690 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23264377820992)>', '<ExcThread(monitor, started 23264140474112)>']
[2026-03-03 15:42:52] 2026-03-03 14:42:48,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 15:42:52] 2026-03-03 14:42:48,479 | INFO     | [monitor] control thread has ended
[2026-03-03 15:42:52] 2026-03-03 14:42:52,715 | INFO     | all workflow threads have been joined
[2026-03-03 15:42:52] 2026-03-03 14:42:52,718 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 15:42:52] 2026-03-03 14:42:52,718 | INFO     | traces error code: 0
[2026-03-03 15:42:52] 2026-03-03 14:42:52,719 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 15:42:52] 2026-03-03 14:42:52,818 [wrapper] ==== pilot stdout END ====
[2026-03-03 15:42:52] 2026-03-03 14:42:52,821 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 15:42:52] 2026-03-03 14:42:52,824 [wrapper] pilotpid: 2891137
[2026-03-03 15:42:52] 2026-03-03 14:42:52,827 [wrapper] Pilot exit status: 0
[2026-03-03 15:42:52] 2026-03-03 14:42:52,836 [wrapper] pandaids: 7036016397
[2026-03-03 15:42:52] 2026-03-03 14:42:52,930 [wrapper] cleanup supervisor_pilot 3895170 2891138
[2026-03-03 15:42:52] 2026-03-03 14:42:52,932 [wrapper] Test setup, not cleaning
[2026-03-03 15:42:52] 2026-03-03 14:42:52,934 [wrapper] apfmon messages muted
[2026-03-03 15:42:52] 2026-03-03 14:42:52,937 [wrapper] ==== wrapper stdout END ====
[2026-03-03 15:42:52] 2026-03-03 14:42:52,939 [wrapper] ==== wrapper stderr END ====
[2026-03-03 15:42:52]  *** Error codes and diagnostics ***
[2026-03-03 15:42:52]     "exeErrorCode": 0,
[2026-03-03 15:42:52]     "exeErrorDiag": "",
[2026-03-03 15:42:52]     "pilotErrorCode": 0,
[2026-03-03 15:42:52]     "pilotErrorDiag": "",
[2026-03-03 15:42:52]  *** Listing of results directory ***
[2026-03-03 15:42:52] total 574812
[2026-03-03 15:42:52] -rw-r--r--. 1 boinc boinc    584627 Mar  2 15:48 pilot3.tar.gz
[2026-03-03 15:42:52] -rwx------. 1 boinc boinc     36322 Mar  2 15:51 runpilot2-wrapper.sh
[2026-03-03 15:42:52] -rw-r--r--. 1 boinc boinc      5111 Mar  2 15:52 queuedata.json
[2026-03-03 15:42:52] -rw-r--r--. 1 boinc boinc       100 Mar  3 13:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 15:42:52] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 13:20 run_atlas
[2026-03-03 15:42:52] -rw-r--r--. 1 boinc boinc       105 Mar  3 13:20 job.xml
[2026-03-03 15:42:52] -rw-r--r--. 2 boinc boinc 297988118 Mar  3 13:20 EVNT.48452356._000001.pool.root.1
[2026-03-03 15:42:52] -rw-r--r--. 2 boinc boinc     15845 Mar  3 13:20 start_atlas.sh
[2026-03-03 15:42:52] drwxrwx--x. 2 boinc boinc      4096 Mar  3 13:20 shared
[2026-03-03 15:42:52] -rw-r--r--. 2 boinc boinc    597970 Mar  3 13:20 input.tar.gz
[2026-03-03 15:42:52] -rw-r--r--. 1 boinc boinc      6705 Mar  3 13:20 init_data.xml
[2026-03-03 15:42:52] -rw-r--r--. 1 boinc boinc         0 Mar  3 13:20 boinc_lockfile
[2026-03-03 15:42:52] -rw-r--r--. 1 boinc boinc      2628 Mar  3 13:20 pandaJob.out
[2026-03-03 15:42:52] -rw-------. 1 boinc boinc    998442 Mar  3 13:20 agis_schedconf.cvmfs.json
[2026-03-03 15:42:52] -rw-------. 1 boinc boinc   1516104 Mar  3 13:20 agis_ddmendpoints.agis.ALL.json
[2026-03-03 15:42:52] -rw-------. 1 boinc boinc       445 Mar  3 13:20 workernode_map.json
[2026-03-03 15:42:52] drwx------. 5 boinc boinc      4096 Mar  3 13:20 pilot3
[2026-03-03 15:42:52] -rw-------. 1 boinc boinc 283589325 Mar  3 15:41 HITS.48846818._000022.pool.root.1
[2026-03-03 15:42:52] -rw-------. 1 boinc boinc        95 Mar  3 15:41 pilot_heartbeat.json
[2026-03-03 15:42:52] -rw-r--r--. 1 boinc boinc       529 Mar  3 15:41 boinc_task_state.xml
[2026-03-03 15:42:52] -rw-------. 1 boinc boinc      1043 Mar  3 15:41 memory_monitor_summary.json
[2026-03-03 15:42:52] -rw-------. 1 boinc boinc    331569 Mar  3 15:41 log.48846818._000022.job.log.tgz.1
[2026-03-03 15:42:52] -rw-------. 1 boinc boinc      6343 Mar  3 15:41 heartbeat.json
[2026-03-03 15:42:52] -rw-r--r--. 1 boinc boinc      8192 Mar  3 15:42 boinc_mmap_file
[2026-03-03 15:42:52] -rw-r--r--. 1 boinc boinc        27 Mar  3 15:42 wrapper_checkpoint.txt
[2026-03-03 15:42:52] -rw-------. 1 boinc boinc      4945 Mar  3 15:42 pilotlog.txt
[2026-03-03 15:42:52] -rw-------. 1 boinc boinc   1213183 Mar  3 15:42 log.48846818._000022.job.log.1
[2026-03-03 15:42:52] -rw-------. 1 boinc boinc       357 Mar  3 15:42 output.list
[2026-03-03 15:42:52] -rw-r--r--. 1 boinc boinc       620 Mar  3 15:42 runtime_log
[2026-03-03 15:42:52] -rw-------. 1 boinc boinc   1566720 Mar  3 15:42 result.tar.gz
[2026-03-03 15:42:52] -rw-r--r--. 1 boinc boinc      9221 Mar  3 15:42 runtime_log.err
[2026-03-03 15:42:52] -rw-------. 1 boinc boinc       661 Mar  3 15:42 7ZLODmlnJH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmeiBLDmQ7AwTm.diag
[2026-03-03 15:42:52] -rw-r--r--. 1 boinc boinc     21135 Mar  3 15:42 stderr.txt
[2026-03-03 15:42:52] HITS file was successfully produced:
[2026-03-03 15:42:52] -rw-------. 1 boinc boinc 283589325 Mar  3 15:41 shared/HITS.pool.root.1
[2026-03-03 15:42:52]  *** Contents of shared directory: ***
[2026-03-03 15:42:53] total 570092
[2026-03-03 15:42:53] -rw-r--r--. 2 boinc boinc 297988118 Mar  3 13:20 ATLAS.root_0
[2026-03-03 15:42:53] -rw-r--r--. 2 boinc boinc     15845 Mar  3 13:20 start_atlas.sh
[2026-03-03 15:42:53] -rw-r--r--. 2 boinc boinc    597970 Mar  3 13:20 input.tar.gz
[2026-03-03 15:42:53] -rw-------. 1 boinc boinc 283589325 Mar  3 15:41 HITS.pool.root.1
[2026-03-03 15:42:53] -rw-------. 1 boinc boinc   1566720 Mar  3 15:42 result.tar.gz
15:42:54 (2886599): run_atlas exited; CPU time 33209.816300
15:42:54 (2886599): called boinc_finish(0)

</stderr_txt>
]]>

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