Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:40:45 (1672986): wrapper (7.7.26015): starting
17:40:45 (1672986): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 17:40:45] Arguments: --nthreads 4
[2026-03-03 17:40:45] Threads: 4
[2026-03-03 17:40:45] Checking for CVMFS
[2026-03-03 17:40:45] No cvmfs_config command found, will try listing directly
[2026-03-03 17:40:45] CVMFS is ok
[2026-03-03 17:40:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 17:40:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 17:40:45] Further information can be found at the LHC@home message board.
[2026-03-03 17:40:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 17:40:45] Checking for apptainer binary...
[2026-03-03 17:40:45] which: no apptainer in ((null))
[2026-03-03 17:40:45] apptainer is not installed, using version from CVMFS
[2026-03-03 17:40:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 17:40:46] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-03 17:40:46] apptainer works
[2026-03-03 17:40:46] Set ATHENA_PROC_NUMBER=4
[2026-03-03 17:40:46] Set ATHENA_CORE_NUMBER=4
[2026-03-03 17:40:46] Starting ATLAS job with PandaID=7036071649
[2026-03-03 17:40:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 20:43:08]  *** The last 200 lines of the pilot log: ***
[2026-03-03 20:43:08] 2026-03-03 19:42:29,271 | INFO     | this job has now completed (state=finished)
[2026-03-03 20:43:08] 2026-03-03 19:42:29,271 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 20:43:08] 2026-03-03 19:42:29,271 | INFO     | log transfer has been attempted: DONE
[2026-03-03 20:43:08] 2026-03-03 19:42:29,271 | INFO     | job 7036071649 has finished - writing final server update
[2026-03-03 20:43:08] 2026-03-03 19:42:29,271 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_390996/.job.ad'
[2026-03-03 20:43:08] 2026-03-03 19:42:29,271 | INFO     | total number of processed events: 400 (read)
[2026-03-03 20:43:08] 2026-03-03 19:42:29,295 | INFO     | using path: /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7036071649/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 20:43:08] 2026-03-03 19:42:29,296 | INFO     | extracted standard info from prmon json
[2026-03-03 20:43:08] 2026-03-03 19:42:29,296 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 20:43:08] 2026-03-03 19:42:29,296 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 20:43:08] 2026-03-03 19:42:29,296 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 20:43:08] 2026-03-03 19:42:29,296 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 20:43:08] 2026-03-03 19:42:29,298 | INFO     | fitting pss+swap vs Time
[2026-03-03 20:43:08] 2026-03-03 19:42:29,298 | INFO     | sum of square deviations: 1719429448.0
[2026-03-03 20:43:08] 2026-03-03 19:42:29,299 | INFO     | sum of deviations: 18545411357.0
[2026-03-03 20:43:08] 2026-03-03 19:42:29,299 | INFO     | mean x: 1772561537.0
[2026-03-03 20:43:08] 2026-03-03 19:42:29,299 | INFO     | mean y: 2312481.6101694917
[2026-03-03 20:43:08] 2026-03-03 19:42:29,299 | INFO     | intersect: -19116170627.713184
[2026-03-03 20:43:08] 2026-03-03 19:42:29,299 | INFO     | chi2: 1.1004389456025934
[2026-03-03 20:43:08] 2026-03-03 19:42:29,299 | INFO     | sum of square deviations: 1577789583.0
[2026-03-03 20:43:08] 2026-03-03 19:42:29,300 | INFO     | sum of deviations: 17943872270.499992
[2026-03-03 20:43:08] 2026-03-03 19:42:29,300 | INFO     | mean x: 1772561384.5
[2026-03-03 20:43:08] 2026-03-03 19:42:29,300 | INFO     | mean y: 2311833.784883721
[2026-03-03 20:43:08] 2026-03-03 19:42:29,300 | INFO     | intersect: -20156659563.790012
[2026-03-03 20:43:08] 2026-03-03 19:42:29,300 | INFO     | chi2: 1.101103979037771
[2026-03-03 20:43:08] 2026-03-03 19:42:29,300 | INFO     | current chi2=1.101103979037771 (change=-0.0604334695564128 %)
[2026-03-03 20:43:08] 2026-03-03 19:42:29,300 | INFO     | right removable region: 171
[2026-03-03 20:43:08] 2026-03-03 19:42:29,300 | INFO     | sum of square deviations: 1577789583.0
[2026-03-03 20:43:08] 2026-03-03 19:42:29,301 | INFO     | sum of deviations: 1168285816.5
[2026-03-03 20:43:08] 2026-03-03 19:42:29,301 | INFO     | mean x: 1772561689.5
[2026-03-03 20:43:08] 2026-03-03 19:42:29,301 | INFO     | mean y: 2330857.761627907
[2026-03-03 20:43:08] 2026-03-03 19:42:29,301 | INFO     | intersect: -1310175387.0676782
[2026-03-03 20:43:08] 2026-03-03 19:42:29,301 | INFO     | chi2: 0.0014400496008472024
[2026-03-03 20:43:08] 2026-03-03 19:42:29,301 | INFO     | current chi2=0.0014400496008472024 (change=99.8691386190391 %)
[2026-03-03 20:43:08] 2026-03-03 19:42:29,301 | INFO     | sum of square deviations: 1444149868.0
[2026-03-03 20:43:08] 2026-03-03 19:42:29,302 | INFO     | sum of deviations: 798197383.0000001
[2026-03-03 20:43:08] 2026-03-03 19:42:29,302 | INFO     | mean x: 1772561842.0
[2026-03-03 20:43:08] 2026-03-03 19:42:29,302 | INFO     | mean y: 2331278.748502994
[2026-03-03 20:43:08] 2026-03-03 19:42:29,302 | INFO     | intersect: -977382984.18287
[2026-03-03 20:43:08] 2026-03-03 19:42:29,302 | INFO     | chi2: 0.0013193352603504582
[2026-03-03 20:43:08] 2026-03-03 19:42:29,302 | INFO     | current chi2=0.0013193352603504582 (change=8.382651571565738 %)
[2026-03-03 20:43:08] 2026-03-03 19:42:29,302 | INFO     | left removable region: 20
[2026-03-03 20:43:08] 2026-03-03 19:42:29,302 | INFO     | sum of square deviations: 1067554900.0
[2026-03-03 20:43:08] 2026-03-03 19:42:29,303 | INFO     | sum of deviations: 1170030568.9999998
[2026-03-03 20:43:08] 2026-03-03 19:42:29,303 | INFO     | mean x: 1772561964.0
[2026-03-03 20:43:08] 2026-03-03 19:42:29,303 | INFO     | mean y: 2330488.5165562914
[2026-03-03 20:43:08] 2026-03-03 19:42:29,303 | INFO     | intersect: -1940381481.9185727
[2026-03-03 20:43:08] 2026-03-03 19:42:29,303 | INFO     | chi2: 0.0008589899542234524
[2026-03-03 20:43:08] 2026-03-03 19:42:29,303 | INFO     | current memory leak: 1.10 B/s (using 151 data points, chi2=0.00)
[2026-03-03 20:43:08] 2026-03-03 19:42:29,303 | INFO     | could have reported an average CPU frequency of 3559 MHz (10 samples)
[2026-03-03 20:43:08] 2026-03-03 19:42:29,303 | INFO     | ..............................
[2026-03-03 20:43:08] 2026-03-03 19:42:29,303 | INFO     | . Timing measurements:
[2026-03-03 20:43:08] 2026-03-03 19:42:29,303 | INFO     | . get job = 0 s
[2026-03-03 20:43:08] 2026-03-03 19:42:29,303 | INFO     | . initial setup = 23 s
[2026-03-03 20:43:08] 2026-03-03 19:42:29,303 | INFO     | . payload setup = 22 s
[2026-03-03 20:43:08] 2026-03-03 19:42:29,303 | INFO     | . stage-in = 0 s
[2026-03-03 20:43:08] 2026-03-03 19:42:29,303 | INFO     | . payload execution = 10805 s
[2026-03-03 20:43:08] 2026-03-03 19:42:29,303 | INFO     | . stage-out = 0 s
[2026-03-03 20:43:08] 2026-03-03 19:42:29,303 | INFO     | . log creation = 0 s
[2026-03-03 20:43:08] 2026-03-03 19:42:29,304 | INFO     | ..............................
[2026-03-03 20:43:08] 2026-03-03 19:42:29,375 | INFO     | 
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | job summary report
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | --------------------------------------------------
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | PanDA job id: 7036071649
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | task id: 48851007
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | errors: (none)
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | pilot state: finished 
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | transexitcode: 0
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | exeerrorcode: 0
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | exeerrordiag: 
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | exitcode: 0
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | exitmsg: OK
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | cpuconsumptiontime: 41035 s
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | nevents: 400
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | neventsw: 0
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | pid: 1712417
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | pgrp: 1712417
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | corecount: 4
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | event service: False
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | sizes: {0: 2286724, 1: 2287185, 11: 2287185, 10832: 2316337, 10833: 2325359, 10834: 2325737}
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | --------------------------------------------------
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | 
[2026-03-03 20:43:08] 2026-03-03 19:42:29,376 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot120/slots/0
[2026-03-03 20:43:08] 2026-03-03 19:42:29,418 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,418 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,418 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,418 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,419 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,419 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,419 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,419 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,419 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,419 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 20:43:08] 2026-03-03 19:42:29,419 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,419 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 20:43:08] 2026-03-03 19:42:29,419 | INFO     | job 7036071649 has completed (purged errors)
[2026-03-03 20:43:08] 2026-03-03 19:42:29,419 | INFO     | overall cleanup function is called
[2026-03-03 20:43:08] 2026-03-03 19:42:30,425 | INFO     | --- collectZombieJob: --- 10, [1712417]
[2026-03-03 20:43:08] 2026-03-03 19:42:30,426 | INFO     | zombie collector waiting for pid 1712417
[2026-03-03 20:43:08] 2026-03-03 19:42:30,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 20:43:08] 2026-03-03 19:42:30,426 | INFO     | collected zombie processes
[2026-03-03 20:43:08] 2026-03-03 19:42:30,426 | INFO     | will attempt to kill all subprocesses of pid=1712417
[2026-03-03 20:43:08] 2026-03-03 19:42:31,193 | INFO     | process IDs to be killed: [1712417] (in reverse order)
[2026-03-03 20:43:08] 2026-03-03 19:42:31,713 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 20:43:08] 2026-03-03 19:42:31,714 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 20:43:08] 2026-03-03 19:42:31,778 | INFO     | did not find any defunct processes belonging to 1712417
[2026-03-03 20:43:08] 2026-03-03 19:42:31,821 | INFO     | did not find any defunct processes belonging to 1712417
[2026-03-03 20:43:08] 2026-03-03 19:42:31,822 | INFO     | ready for new job
[2026-03-03 20:43:08] 2026-03-03 19:42:31,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 20:43:08] 2026-03-03 19:42:31,823 | INFO     | **************************************
[2026-03-03 20:43:08] 2026-03-03 19:42:31,823 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 20:43:08] 2026-03-03 19:42:31,823 | INFO     | **************************************
[2026-03-03 20:43:08] 2026-03-03 19:42:31,823 | INFO     | 
[2026-03-03 20:43:08] 2026-03-03 19:42:31,826 | WARNING  | process 1712417 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 20:43:08] 2026-03-03 19:42:31,833 | INFO     | architecture information:
[2026-03-03 20:43:08] 2026-03-03 19:42:31,836 | INFO     | executing command: cat /etc/os-release
[2026-03-03 20:43:08] 2026-03-03 19:42:31,858 | INFO     | cat /etc/os-release:
[2026-03-03 20:43:08] NAME="CentOS Linux"
[2026-03-03 20:43:08] VERSION="7 (Core)"
[2026-03-03 20:43:08] ID="centos"
[2026-03-03 20:43:08] ID_LIKE="rhel fedora"
[2026-03-03 20:43:08] VERSION_ID="7"
[2026-03-03 20:43:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 20:43:08] ANSI_COLOR="0;31"
[2026-03-03 20:43:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 20:43:08] HOME_URL="https://www.centos.org/"
[2026-03-03 20:43:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 20:43:08] 
[2026-03-03 20:43:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 20:43:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 20:43:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 20:43:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 20:43:08] 
[2026-03-03 20:43:08] 2026-03-03 19:42:31,858 | INFO     | **************************************
[2026-03-03 20:43:08] 2026-03-03 19:42:32,168 | INFO     | using path: /var/lib/boinc/var/slot120/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 20:43:08] 2026-03-03 19:42:32,361 | INFO     | executing command: df -mP /var/lib/boinc/var/slot120/slots/0
[2026-03-03 20:43:08] 2026-03-03 19:42:32,383 | INFO     | sufficient remaining disk space (20823670784 B)
[2026-03-03 20:43:08] 2026-03-03 19:42:32,384 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 20:43:08] 2026-03-03 19:42:32,384 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 20:43:08] 2026-03-03 19:42:32,384 | INFO     | update_server=False
[2026-03-03 20:43:08] 2026-03-03 19:42:32,384 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 20:43:08] 2026-03-03 19:42:32,384 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 20:43:08] 2026-03-03 19:42:32,440 | INFO     | all payload control threads have been joined
[2026-03-03 20:43:08] 2026-03-03 19:42:32,686 | INFO     | number of running child processes to parent process 1712417: 1
[2026-03-03 20:43:08] 2026-03-03 19:42:32,686 | INFO     | maximum number of monitored processes: 6
[2026-03-03 20:43:08] 2026-03-03 19:42:32,686 | INFO     | aborting job monitoring since job object (job id=7036071649) has expired
[2026-03-03 20:43:08] 2026-03-03 19:42:32,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 20:43:08] 2026-03-03 19:42:32,687 | INFO     | will abort loop
[2026-03-03 20:43:08] 2026-03-03 19:42:33,315 | INFO     | all data control threads have been joined
[2026-03-03 20:43:08] 2026-03-03 19:42:33,389 | INFO     | [job] retrieve thread has finished
[2026-03-03 20:43:08] 2026-03-03 19:42:33,445 | INFO     | [payload] control thread has finished
[2026-03-03 20:43:08] 2026-03-03 19:42:33,461 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 20:43:08] 2026-03-03 19:42:33,564 | INFO     | [payload] failed_post thread has finished
[2026-03-03 20:43:08] 2026-03-03 19:42:33,692 | INFO     | [job] job monitor thread has finished
[2026-03-03 20:43:08] 2026-03-03 19:42:33,771 | INFO     | [job] validate thread has finished
[2026-03-03 20:43:08] 2026-03-03 19:42:33,773 | INFO     | all job control threads have been joined
[2026-03-03 20:43:08] 2026-03-03 19:42:33,849 | INFO     | [data] copytool_in thread has finished
[2026-03-03 20:43:08] 2026-03-03 19:42:33,982 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 20:43:08] 2026-03-03 19:42:34,022 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 20:43:08] 2026-03-03 19:42:34,320 | INFO     | [data] control thread has finished
[2026-03-03 20:43:08] 2026-03-03 19:42:34,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 20:43:08] 2026-03-03 19:42:34,390 | INFO     | [data] copytool_out thread has finished
[2026-03-03 20:43:08] 2026-03-03 19:42:34,485 | INFO     | [payload] validate_post thread has finished
[2026-03-03 20:43:08] 2026-03-03 19:42:34,526 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 20:43:08] 2026-03-03 19:42:34,779 | INFO     | [job] control thread has finished
[2026-03-03 20:43:08] 2026-03-03 19:42:35,265 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 20:43:08] 2026-03-03 19:42:35,389 | INFO     | [job] queue monitor thread has finished
[2026-03-03 20:43:08] 2026-03-03 19:42:39,274 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 20:43:08] 2026-03-03 19:43:01,565 | INFO     | PID=1688141 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 20:43:08] 2026-03-03 19:43:01,565 | INFO     | .. there are 58 such processes running
[2026-03-03 20:43:08] 2026-03-03 19:43:01,566 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 20:43:08] 2026-03-03 19:43:01,566 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 20:43:08] 2026-03-03 19:43:01,566 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 20:43:08] 2026-03-03 19:43:02,094 | INFO     | [monitor] cgroup control has ended
[2026-03-03 20:43:08] 2026-03-03 19:43:02,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23448079894336)>', '<ExcThread(monitor, started 23447769970432)>']
[2026-03-03 20:43:08] 2026-03-03 19:43:02,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 20:43:08] 2026-03-03 19:43:02,571 | INFO     | [monitor] control thread has ended
[2026-03-03 20:43:08] 2026-03-03 19:43:07,563 | INFO     | all workflow threads have been joined
[2026-03-03 20:43:08] 2026-03-03 19:43:07,564 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 20:43:08] 2026-03-03 19:43:07,564 | INFO     | traces error code: 0
[2026-03-03 20:43:08] 2026-03-03 19:43:07,564 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 20:43:08] 2026-03-03 19:43:07,707 [wrapper] ==== pilot stdout END ====
[2026-03-03 20:43:08] 2026-03-03 19:43:07,718 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 20:43:08] 2026-03-03 19:43:07,724 [wrapper] pilotpid: 1688141
[2026-03-03 20:43:08] 2026-03-03 19:43:07,736 [wrapper] Pilot exit status: 0
[2026-03-03 20:43:08] 2026-03-03 19:43:07,803 [wrapper] pandaids: 7036071649
[2026-03-03 20:43:08] 2026-03-03 19:43:07,935 [wrapper] cleanup supervisor_pilot 3271556 1688142
[2026-03-03 20:43:08] 2026-03-03 19:43:07,942 [wrapper] Test setup, not cleaning
[2026-03-03 20:43:08] 2026-03-03 19:43:07,960 [wrapper] apfmon messages muted
[2026-03-03 20:43:08] 2026-03-03 19:43:07,977 [wrapper] ==== wrapper stdout END ====
[2026-03-03 20:43:08] 2026-03-03 19:43:07,983 [wrapper] ==== wrapper stderr END ====
[2026-03-03 20:43:08]  *** Error codes and diagnostics ***
[2026-03-03 20:43:08]     "exeErrorCode": 0,
[2026-03-03 20:43:08]     "exeErrorDiag": "",
[2026-03-03 20:43:08]     "pilotErrorCode": 0,
[2026-03-03 20:43:08]     "pilotErrorDiag": "",
[2026-03-03 20:43:08]  *** Listing of results directory ***
[2026-03-03 20:43:08] total 414728
[2026-03-03 20:43:08] -rw-r--r--. 1 boinc boinc      5111 Mar  2 19:26 queuedata.json
[2026-03-03 20:43:08] -rw-r--r--. 1 boinc boinc    584627 Mar  2 19:26 pilot3.tar.gz
[2026-03-03 20:43:08] -rwx------. 1 boinc boinc     36322 Mar  2 19:26 runpilot2-wrapper.sh
[2026-03-03 20:43:08] -rw-r--r--. 1 boinc boinc       100 Mar  3 17:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 20:43:08] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 17:40 run_atlas
[2026-03-03 20:43:08] -rw-r--r--. 1 boinc boinc       105 Mar  3 17:40 job.xml
[2026-03-03 20:43:08] -rw-r--r--. 1 boinc boinc      6707 Mar  3 17:40 init_data.xml
[2026-03-03 20:43:08] -rw-r--r--. 2 boinc boinc 217443484 Mar  3 17:40 EVNT.48459562._000001.pool.root.1
[2026-03-03 20:43:08] -rw-r--r--. 2 boinc boinc     15845 Mar  3 17:40 start_atlas.sh
[2026-03-03 20:43:08] drwxrwx--x. 2 boinc boinc      4096 Mar  3 17:40 shared
[2026-03-03 20:43:08] -rw-r--r--. 2 boinc boinc    597939 Mar  3 17:40 input.tar.gz
[2026-03-03 20:43:08] -rw-r--r--. 1 boinc boinc         0 Mar  3 17:40 boinc_lockfile
[2026-03-03 20:43:08] -rw-r--r--. 1 boinc boinc      2615 Mar  3 17:40 pandaJob.out
[2026-03-03 20:43:08] -rw-------. 1 boinc boinc    998516 Mar  3 17:41 agis_schedconf.cvmfs.json
[2026-03-03 20:43:08] -rw-------. 1 boinc boinc       445 Mar  3 17:41 workernode_map.json
[2026-03-03 20:43:08] drwx------. 5 boinc boinc      4096 Mar  3 17:41 pilot3
[2026-03-03 20:43:08] -rw-------. 1 boinc boinc 199529160 Mar  3 20:42 HITS.48851007._000011.pool.root.1
[2026-03-03 20:43:08] -rw-r--r--. 1 boinc boinc       531 Mar  3 20:42 boinc_task_state.xml
[2026-03-03 20:43:08] -rw-------. 1 boinc boinc      1045 Mar  3 20:42 memory_monitor_summary.json
[2026-03-03 20:43:08] -rw-------. 1 boinc boinc   1516092 Mar  3 20:42 agis_ddmendpoints.agis.ALL.json
[2026-03-03 20:43:08] -rw-------. 1 boinc boinc    353188 Mar  3 20:42 log.48851007._000011.job.log.tgz.1
[2026-03-03 20:43:08] -rw-------. 1 boinc boinc      6349 Mar  3 20:42 heartbeat.json
[2026-03-03 20:43:08] -rw-r--r--. 1 boinc boinc      8192 Mar  3 20:42 boinc_mmap_file
[2026-03-03 20:43:08] -rw-r--r--. 1 boinc boinc        28 Mar  3 20:42 wrapper_checkpoint.txt
[2026-03-03 20:43:08] -rw-------. 1 boinc boinc        95 Mar  3 20:43 pilot_heartbeat.json
[2026-03-03 20:43:08] -rw-------. 1 boinc boinc      5363 Mar  3 20:43 pilotlog.txt
[2026-03-03 20:43:08] -rw-------. 1 boinc boinc   1532223 Mar  3 20:43 log.48851007._000011.job.log.1
[2026-03-03 20:43:08] -rw-------. 1 boinc boinc       357 Mar  3 20:43 output.list
[2026-03-03 20:43:08] -rw-r--r--. 1 boinc boinc       620 Mar  3 20:43 runtime_log
[2026-03-03 20:43:08] -rw-------. 1 boinc boinc   1904640 Mar  3 20:43 result.tar.gz
[2026-03-03 20:43:08] -rw-------. 1 boinc boinc       665 Mar  3 20:43 s97LDmw9MH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmjSELDm14RrKo.diag
[2026-03-03 20:43:08] -rw-r--r--. 1 boinc boinc      9222 Mar  3 20:43 runtime_log.err
[2026-03-03 20:43:08] -rw-r--r--. 1 boinc boinc     21127 Mar  3 20:43 stderr.txt
[2026-03-03 20:43:08] HITS file was successfully produced:
[2026-03-03 20:43:08] -rw-------. 1 boinc boinc 199529160 Mar  3 20:42 shared/HITS.pool.root.1
[2026-03-03 20:43:08]  *** Contents of shared directory: ***
[2026-03-03 20:43:08] total 409672
[2026-03-03 20:43:08] -rw-r--r--. 2 boinc boinc 217443484 Mar  3 17:40 ATLAS.root_0
[2026-03-03 20:43:08] -rw-r--r--. 2 boinc boinc     15845 Mar  3 17:40 start_atlas.sh
[2026-03-03 20:43:08] -rw-r--r--. 2 boinc boinc    597939 Mar  3 17:40 input.tar.gz
[2026-03-03 20:43:08] -rw-------. 1 boinc boinc 199529160 Mar  3 20:42 HITS.pool.root.1
[2026-03-03 20:43:08] -rw-------. 1 boinc boinc   1904640 Mar  3 20:43 result.tar.gz
20:43:09 (1672986): run_atlas exited; CPU time 41503.648047
20:43:09 (1672986): called boinc_finish(0)

</stderr_txt>
]]>

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