Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:32:00 (2017229): wrapper (7.7.26015): starting
12:32:00 (2017229): wrapper: running run_atlas (--nthreads 12)
[2026-03-02 12:32:00] Arguments: --nthreads 12
[2026-03-02 12:32:00] Threads: 12
[2026-03-02 12:32:00] Checking for CVMFS
[2026-03-02 12:32:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 12:32:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 12:32:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 12:32:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 12:32:02] 2.11.5.0 4065894 131901 193276 156819 3 375 36788358 45568001 19718 130560 0 1199248525 99.819 666335128 20670 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-03-02 12:32:02] CVMFS is ok
[2026-03-02 12:32:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 12:32:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 12:32:02] Further information can be found at the LHC@home message board.
[2026-03-02 12:32:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 12:32:02] Checking for apptainer binary...
[2026-03-02 12:32:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 12:32:02] Running /usr/bin/apptainer --version
[2026-03-02 12:32:02] apptainer version 1.4.1-1.el9
[2026-03-02 12:32:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 12:32:02] wns0085.triumf.lcg
[2026-03-02 12:32:02] apptainer works
[2026-03-02 12:32:02] Set ATHENA_PROC_NUMBER=12
[2026-03-02 12:32:02] Set ATHENA_CORE_NUMBER=12
[2026-03-02 12:32:02] Starting ATLAS job with PandaID=7036056645
[2026-03-02 12:32:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 12:36:04]  *** The last 200 lines of the pilot log: ***
[2026-03-02 12:36:04] 2026-03-02 20:35:28,942 | INFO     | will not add max space = 0 B to job metrics
[2026-03-02 12:36:04] 2026-03-02 20:35:28,942 | WARNING  | wrong length of table data, x=[1772483579.0], y=[1024.0] (must be same and length>=4)
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | could have reported an average CPU frequency of 2616 MHz (4 samples)
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | ..............................
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . Timing measurements:
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . get job = 0 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . initial setup = 15 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . payload setup = 12 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . stage-in = 0 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . payload execution = 38 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . stage-out = 0 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . log creation = 0 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | ..............................
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036056645/pilotlog.txt
[2026-03-02 12:36:04] 2026-03-02 20:35:29,015 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-02 12:36:04] - Log from pilotlog.txt -
[2026-03-02 12:36:04] 2026-03-02 20:35:28,941 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 12:36:04] 2026-03-02 20:35:28,941 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 12:36:04] 2026-03-02 20:35:28,942 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 12:36:04] 2026-03-02 20:35:28,942 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 12:36:04] 2026-03-02 20:35:28,942 | WARNING  | found no stored workdir sizes
[2026-03-02 12:36:04] 2026-03-02 20:35:28,942 | INFO     | will not add max space = 0 B to job metrics
[2026-03-02 12:36:04] 2026-03-02 20:35:28,942 | WARNING  | wrong length of table data, x=[1772483579.0], y=[1024.0] (must be same and length>=4)
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | could have reported an average CPU frequency of 2616 MHz (4 samples)
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | ..............................
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . Timing measurements:
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . get job = 0 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . initial setup = 15 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . payload setup = 12 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . stage-in = 0 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . payload execution = 38 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . stage-out = 0 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . log creation = 0 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | ..............................
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036056645/pilotlog.txt
[2026-03-02 12:36:04] 2026-03-02 20:35:29,016 | WARNING  | 
[2026-03-02 12:36:04] [begin log extracts]
[2026-03-02 12:36:04] - Log from pilotlog.txt -
[2026-03-02 12:36:04] 2026-03-02 20:35:28,941 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 12:36:04] 2026-03-02 20:35:28,941 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 12:36:04] 2026-03-02 20:35:28,942 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 12:36:04] 2026-03-02 20:35:28,942 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 12:36:04] 2026-03-02 20:35:28,942 | WARNING  | found no stored workdir sizes
[2026-03-02 12:36:04] 2026-03-02 20:35:28,942 | INFO     | will not add max space = 0 B to job metrics
[2026-03-02 12:36:04] 2026-03-02 20:35:28,942 | WARNING  | wrong length of table data, x=[1772483579.0], y=[1024.0] (must be same and length>=4)
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | could have reported an average CPU frequency of 2616 MHz (4 samples)
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | ..............................
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . Timing measurements:
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . get job = 0 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . initial setup = 15 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . payload setup = 12 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . stage-in = 0 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . payload execution = 38 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . stage-out = 0 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | . log creation = 0 s
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | ..............................
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 12:36:04] 2026-03-02 20:35:28,943 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036056645/pilotlog.txt
[2026-03-02 12:36:04] [end log extracts]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,017 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-02 12:36:04] 2026-03-02 20:35:29,017 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-02 12:36:04] 2026-03-02 20:35:29,459 | INFO     | time since job start (176s) is within the limit (349056.0s)
[2026-03-02 12:36:04] 2026-03-02 20:35:29,605 | INFO     | 
[2026-03-02 12:36:04] 2026-03-02 20:35:29,605 | INFO     | job summary report
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | --------------------------------------------------
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | PanDA job id: 7036056645
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | task id: 48838586
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-02 12:33:19,387 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | pilot state: failed 
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | transexitcode: 65
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | exeerrorcode: 65
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | exitcode: 65
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | cpuconsumptiontime: 14 s
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | nevents: 0
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | neventsw: 0
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | pid: 2033360
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | pgrp: 2033360
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | corecount: 12
[2026-03-02 12:36:04] 2026-03-02 20:35:29,606 | INFO     | event service: False
[2026-03-02 12:36:04] 2026-03-02 20:35:29,607 | INFO     | sizes: {0: 2282219, 55: 2305509, 57: 2309801, 58: 2309829, 175: 2309995}
[2026-03-02 12:36:04] 2026-03-02 20:35:29,607 | INFO     | --------------------------------------------------
[2026-03-02 12:36:04] 2026-03-02 20:35:29,607 | INFO     | 
[2026-03-02 12:36:04] 2026-03-02 20:35:29,607 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-02 12:36:04] 2026-03-02 20:35:29,725 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,725 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,725 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,725 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,725 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,726 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,726 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,726 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,726 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,726 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 12:36:04] 2026-03-02 20:35:29,726 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,726 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 12:36:04] 2026-03-02 20:35:29,726 | INFO     | job 7036056645 has completed (purged errors)
[2026-03-02 12:36:04] 2026-03-02 20:35:29,726 | INFO     | overall cleanup function is called
[2026-03-02 12:36:04] 2026-03-02 20:35:30,733 | INFO     | --- collectZombieJob: --- 10, [2033360]
[2026-03-02 12:36:04] 2026-03-02 20:35:30,733 | INFO     | zombie collector waiting for pid 2033360
[2026-03-02 12:36:04] 2026-03-02 20:35:30,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 12:36:04] 2026-03-02 20:35:30,734 | INFO     | collected zombie processes
[2026-03-02 12:36:04] 2026-03-02 20:35:30,734 | INFO     | will attempt to kill all subprocesses of pid=2033360
[2026-03-02 12:36:04] 2026-03-02 20:35:31,414 | INFO     | process IDs to be killed: [2033360] (in reverse order)
[2026-03-02 12:36:04] 2026-03-02 20:35:31,747 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 12:36:04] 2026-03-02 20:35:31,747 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 12:36:04] 2026-03-02 20:35:31,778 | INFO     | did not find any defunct processes belonging to 2033360
[2026-03-02 12:36:04] 2026-03-02 20:35:31,842 | INFO     | did not find any defunct processes belonging to 2033360
[2026-03-02 12:36:04] 2026-03-02 20:35:31,843 | INFO     | ready for new job
[2026-03-02 12:36:04] 2026-03-02 20:35:31,843 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 12:36:04] 2026-03-02 20:35:31,862 | INFO     | **************************************
[2026-03-02 12:36:04] 2026-03-02 20:35:31,862 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 12:36:04] 2026-03-02 20:35:31,862 | INFO     | **************************************
[2026-03-02 12:36:04] 2026-03-02 20:35:31,862 | INFO     | 
[2026-03-02 12:36:04] 2026-03-02 20:35:31,864 | INFO     | architecture information:
[2026-03-02 12:36:04] 2026-03-02 20:35:31,875 | INFO     | executing command: cat /etc/os-release
[2026-03-02 12:36:04] 2026-03-02 20:35:31,917 | INFO     | cat /etc/os-release:
[2026-03-02 12:36:04] NAME="CentOS Linux"
[2026-03-02 12:36:04] VERSION="7 (Core)"
[2026-03-02 12:36:04] ID="centos"
[2026-03-02 12:36:04] ID_LIKE="rhel fedora"
[2026-03-02 12:36:04] VERSION_ID="7"
[2026-03-02 12:36:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 12:36:04] ANSI_COLOR="0;31"
[2026-03-02 12:36:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 12:36:04] HOME_URL="https://www.centos.org/"
[2026-03-02 12:36:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 12:36:04] 
[2026-03-02 12:36:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 12:36:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 12:36:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 12:36:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 12:36:04] 
[2026-03-02 12:36:04] 2026-03-02 20:35:31,917 | INFO     | **************************************
[2026-03-02 12:36:04] 2026-03-02 20:35:32,420 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-02 12:36:04] 2026-03-02 20:35:32,464 | INFO     | sufficient remaining disk space (1859198648320 B)
[2026-03-02 12:36:04] 2026-03-02 20:35:32,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 12:36:04] 2026-03-02 20:35:32,464 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 12:36:04] 2026-03-02 20:35:32,464 | INFO     | update_server=False
[2026-03-02 12:36:04] 2026-03-02 20:35:32,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 12:36:04] 2026-03-02 20:35:32,466 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 12:36:04] 2026-03-02 20:35:32,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 12:36:04] 2026-03-02 20:35:32,889 | INFO     | aborting loop
[2026-03-02 12:36:04] 2026-03-02 20:35:33,387 | INFO     | all data control threads have been joined
[2026-03-02 12:36:04] 2026-03-02 20:35:33,490 | INFO     | [job] retrieve thread has finished
[2026-03-02 12:36:04] 2026-03-02 20:35:33,501 | INFO     | [monitor] cgroup control has ended
[2026-03-02 12:36:04] 2026-03-02 20:35:33,657 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 12:36:04] 2026-03-02 20:35:33,772 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 12:36:04] 2026-03-02 20:35:33,800 | INFO     | all job control threads have been joined
[2026-03-02 12:36:04] 2026-03-02 20:35:33,894 | INFO     | [job] job monitor thread has finished
[2026-03-02 12:36:04] 2026-03-02 20:35:33,928 | INFO     | all payload control threads have been joined
[2026-03-02 12:36:04] 2026-03-02 20:35:34,297 | INFO     | [payload] validate_post thread has finished
[2026-03-02 12:36:04] 2026-03-02 20:35:34,307 | INFO     | [payload] failed_post thread has finished
[2026-03-02 12:36:04] 2026-03-02 20:35:34,309 | INFO     | [job] validate thread has finished
[2026-03-02 12:36:04] 2026-03-02 20:35:34,397 | INFO     | [data] control thread has finished
[2026-03-02 12:36:04] 2026-03-02 20:35:34,426 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 12:36:04] 2026-03-02 20:35:34,476 | INFO     | [data] copytool_out thread has finished
[2026-03-02 12:36:04] 2026-03-02 20:35:34,604 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 12:36:04] 2026-03-02 20:35:34,696 | INFO     | [data] copytool_in thread has finished
[2026-03-02 12:36:04] 2026-03-02 20:35:34,806 | INFO     | [job] control thread has finished
[2026-03-02 12:36:04] 2026-03-02 20:35:34,865 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 12:36:04] 2026-03-02 20:35:34,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 12:36:04] 2026-03-02 20:35:34,950 | INFO     | [payload] control thread has finished
[2026-03-02 12:36:04] 2026-03-02 20:35:35,610 | INFO     | [job] queue monitor thread has finished
[2026-03-02 12:36:04] 2026-03-02 20:35:38,897 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 12:36:04] 2026-03-02 20:35:40,473 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139971412375360)>', '<ExcThread(monitor, started 139971012839168)>']
[2026-03-02 12:36:04] 2026-03-02 20:35:45,499 | INFO     | all workflow threads have been joined
[2026-03-02 12:36:04] 2026-03-02 20:35:45,499 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 12:36:04] 2026-03-02 20:35:45,500 | INFO     | traces error code: 0
[2026-03-02 12:36:04] 2026-03-02 20:35:45,500 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 12:36:04] 2026-03-02 20:36:03,522 | INFO     | PID=2025199 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 12:36:04] 2026-03-02 20:36:03,522 | INFO     | .. there are 28 such processes running
[2026-03-02 12:36:04] 2026-03-02 20:36:03,523 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 12:36:04] 2026-03-02 20:36:03,523 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 12:36:04] 2026-03-02 20:36:03,523 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 12:36:04] 2026-03-02 20:36:03,523 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 12:36:04] 2026-03-02 20:36:03,523 | CRITICAL | thread 'MainThread' is not alive
[2026-03-02 12:36:04] 2026-03-02 20:36:03,523 | INFO     | [monitor] control thread has ended
[2026-03-02 12:36:04] 2026-03-02 20:36:04,065 [wrapper] ==== pilot stdout END ====
[2026-03-02 12:36:04] 2026-03-02 20:36:04,078 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 12:36:04] 2026-03-02 20:36:04,094 [wrapper] pilotpid: 2025199
[2026-03-02 12:36:04] 2026-03-02 20:36:04,109 [wrapper] Pilot exit status: 0
[2026-03-02 12:36:04] 2026-03-02 20:36:04,221 [wrapper] pandaids: 7036056645
[2026-03-02 12:36:04] 2026-03-02 20:36:04,347 [wrapper] cleanup supervisor_pilot 2025220 2025200
[2026-03-02 12:36:04] 2026-03-02 20:36:04,355 [wrapper] Test setup, not cleaning
[2026-03-02 12:36:04] 2026-03-02 20:36:04,364 [wrapper] apfmon messages muted
[2026-03-02 12:36:04] 2026-03-02 20:36:04,393 [wrapper] ==== wrapper stdout END ====
[2026-03-02 12:36:04] 2026-03-02 20:36:04,415 [wrapper] ==== wrapper stderr END ====
[2026-03-02 12:36:04]  *** Error codes and diagnostics ***
[2026-03-02 12:36:04]     "exeErrorCode": 65,
[2026-03-02 12:36:04]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-02 12:36:04]     "pilotErrorCode": 1305,
[2026-03-02 12:36:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-02 12:36:04]  *** Listing of results directory ***
[2026-03-02 12:36:04] total 275744
[2026-03-02 12:36:04] -rw-r--r--. 1 boinc boinc    584627 Mar  2 09:50 pilot3.tar.gz
[2026-03-02 12:36:04] -rw-r--r--. 1 boinc boinc      5111 Mar  2 10:01 queuedata.json
[2026-03-02 12:36:04] -rwx------. 1 boinc boinc     36322 Mar  2 10:02 runpilot2-wrapper.sh
[2026-03-02 12:36:04] -rw-r--r--. 1 boinc boinc       100 Mar  2 12:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 12:36:04] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 12:31 run_atlas
[2026-03-02 12:36:04] -rw-r--r--. 1 boinc boinc       105 Mar  2 12:31 job.xml
[2026-03-02 12:36:04] -rw-r--r--. 1 boinc boinc      6594 Mar  2 12:32 init_data.xml
[2026-03-02 12:36:04] -rw-r--r--. 2 boinc boinc 278233053 Mar  2 12:32 EVNT.48220221._000074.pool.root.1
[2026-03-02 12:36:04] -rw-r--r--. 2 boinc boinc     15845 Mar  2 12:32 start_atlas.sh
[2026-03-02 12:36:04] drwxrwx--x. 2 boinc boinc      4096 Mar  2 12:32 shared
[2026-03-02 12:36:04] -rw-r--r--. 2 boinc boinc    597953 Mar  2 12:32 input.tar.gz
[2026-03-02 12:36:04] -rw-r--r--. 1 boinc boinc         0 Mar  2 12:32 boinc_lockfile
[2026-03-02 12:36:04] -rw-r--r--. 1 boinc boinc      2561 Mar  2 12:32 pandaJob.out
[2026-03-02 12:36:04] -rw-------. 1 boinc boinc    998454 Mar  2 12:32 agis_schedconf.cvmfs.json
[2026-03-02 12:36:04] -rw-------. 1 boinc boinc   1512931 Mar  2 12:32 agis_ddmendpoints.agis.ALL.json
[2026-03-02 12:36:04] -rw-------. 1 boinc boinc       445 Mar  2 12:32 workernode_map.json
[2026-03-02 12:36:04] drwx------. 5 boinc boinc      4096 Mar  2 12:32 pilot3
[2026-03-02 12:36:04] -rw-r--r--. 1 boinc boinc       523 Mar  2 12:33 boinc_task_state.xml
[2026-03-02 12:36:04] -rw-------. 1 boinc boinc       950 Mar  2 12:33 memory_monitor_summary.json
[2026-03-02 12:36:04] -rw-------. 1 boinc boinc     20915 Mar  2 12:33 log.48838586._001903.job.log.tgz.1
[2026-03-02 12:36:04] -rw-------. 1 boinc boinc        95 Mar  2 12:35 pilot_heartbeat.json
[2026-03-02 12:36:04] -rw-------. 1 boinc boinc      7007 Mar  2 12:35 heartbeat.json
[2026-03-02 12:36:04] -rw-r--r--. 1 boinc boinc        22 Mar  2 12:36 wrapper_checkpoint.txt
[2026-03-02 12:36:04] -rw-r--r--. 1 boinc boinc      8192 Mar  2 12:36 boinc_mmap_file
[2026-03-02 12:36:04] -rw-------. 1 boinc boinc       893 Mar  2 12:36 pilotlog.txt
[2026-03-02 12:36:04] -rw-------. 1 boinc boinc     83054 Mar  2 12:36 log.48838586._001903.job.log.1
[2026-03-02 12:36:04] -rw-------. 1 boinc boinc       188 Mar  2 12:36 output.list
[2026-03-02 12:36:04] -rw-r--r--. 1 boinc boinc       620 Mar  2 12:36 runtime_log
[2026-03-02 12:36:04] -rw-------. 1 boinc boinc    122880 Mar  2 12:36 result.tar.gz
[2026-03-02 12:36:04] -rw-------. 1 boinc boinc       643 Mar  2 12:36 z8oMDmEmMH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmrHCLDmE3vQnn.diag
[2026-03-02 12:36:04] -rw-r--r--. 1 boinc boinc      8635 Mar  2 12:36 runtime_log.err
[2026-03-02 12:36:04] -rw-r--r--. 1 boinc boinc     21637 Mar  2 12:36 stderr.txt
[2026-03-02 12:36:04] No HITS result produced
[2026-03-02 12:36:04]  *** Contents of shared directory: ***
[2026-03-02 12:36:04] total 272436
[2026-03-02 12:36:04] -rw-r--r--. 2 boinc boinc 278233053 Mar  2 12:32 ATLAS.root_0
[2026-03-02 12:36:04] -rw-r--r--. 2 boinc boinc     15845 Mar  2 12:32 start_atlas.sh
[2026-03-02 12:36:04] -rw-r--r--. 2 boinc boinc    597953 Mar  2 12:32 input.tar.gz
[2026-03-02 12:36:04] -rw-------. 1 boinc boinc    122880 Mar  2 12:36 result.tar.gz
12:36:06 (2017229): run_atlas exited; CPU time 19.835872
12:36:06 (2017229): called boinc_finish(0)

</stderr_txt>
]]>

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