Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:52:34 (2200089): wrapper (7.7.26015): starting
11:52:34 (2200089): wrapper: running run_atlas (--nthreads 12)
[2026-03-02 11:52:34] Arguments: --nthreads 12
[2026-03-02 11:52:34] Threads: 12
[2026-03-02 11:52:34] Checking for CVMFS
[2026-03-02 11:52:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 11:52:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 11:52:35] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 11:52:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 11:52:35] 2.11.5.0 3306151 131896 215160 156818 3 228 43128976 45568000 20467 130560 0 771531794 99.814 452923056 21794 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-02 11:52:35] CVMFS is ok
[2026-03-02 11:52:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 11:52:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 11:52:35] Further information can be found at the LHC@home message board.
[2026-03-02 11:52:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 11:52:35] Checking for apptainer binary...
[2026-03-02 11:52:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 11:52:35] Running /usr/bin/apptainer --version
[2026-03-02 11:52:36] apptainer version 1.4.1-1.el9
[2026-03-02 11:52:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 11:52:37] wns0041.triumf.lcg
[2026-03-02 11:52:37] apptainer works
[2026-03-02 11:52:37] Set ATHENA_PROC_NUMBER=12
[2026-03-02 11:52:37] Set ATHENA_CORE_NUMBER=12
[2026-03-02 11:52:37] Starting ATLAS job with PandaID=7036039273
[2026-03-02 11:52:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 11:57:56]  *** The last 200 lines of the pilot log: ***
[2026-03-02 11:57:56] 2026-03-02 19:57:22,911 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 11:57:56] 2026-03-02 19:57:22,912 | WARNING  | wrong length of table data, x=[1772481273.0], y=[24895.0] (must be same and length>=4)
[2026-03-02 11:57:56] 2026-03-02 19:57:22,912 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-03-02 11:57:56] 2026-03-02 19:57:22,912 | INFO     | ..............................
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . Timing measurements:
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . get job = 0 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . initial setup = 24 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . payload setup = 24 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . stage-in = 0 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . payload execution = 68 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . stage-out = 2 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . log creation = 0 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | ..............................
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 11:57:56] 2026-03-02 19:57:22,914 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036039273/pilotlog.txt
[2026-03-02 11:57:56] 2026-03-02 19:57:22,965 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-02 11:57:56] - Log from pilotlog.txt -
[2026-03-02 11:57:56] 2026-03-02 19:57:22,899 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7036039273/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 11:57:56] 2026-03-02 19:57:22,899 | INFO     | extracted standard info from prmon json
[2026-03-02 11:57:56] 2026-03-02 19:57:22,900 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 11:57:56] 2026-03-02 19:57:22,900 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 11:57:56] 2026-03-02 19:57:22,911 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 11:57:56] 2026-03-02 19:57:22,911 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 11:57:56] 2026-03-02 19:57:22,912 | WARNING  | wrong length of table data, x=[1772481273.0], y=[24895.0] (must be same and length>=4)
[2026-03-02 11:57:56] 2026-03-02 19:57:22,912 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-03-02 11:57:56] 2026-03-02 19:57:22,912 | INFO     | ..............................
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . Timing measurements:
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . get job = 0 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . initial setup = 24 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . payload setup = 24 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . stage-in = 0 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . payload execution = 68 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . stage-out = 2 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . log creation = 0 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | ..............................
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 11:57:56] 2026-03-02 19:57:22,914 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036039273/pilotlog.txt
[2026-03-02 11:57:56] 2026-03-02 19:57:22,966 | WARNING  | 
[2026-03-02 11:57:56] [begin log extracts]
[2026-03-02 11:57:56] - Log from pilotlog.txt -
[2026-03-02 11:57:56] 2026-03-02 19:57:22,899 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7036039273/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 11:57:56] 2026-03-02 19:57:22,899 | INFO     | extracted standard info from prmon json
[2026-03-02 11:57:56] 2026-03-02 19:57:22,900 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 11:57:56] 2026-03-02 19:57:22,900 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 11:57:56] 2026-03-02 19:57:22,911 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 11:57:56] 2026-03-02 19:57:22,911 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 11:57:56] 2026-03-02 19:57:22,912 | WARNING  | wrong length of table data, x=[1772481273.0], y=[24895.0] (must be same and length>=4)
[2026-03-02 11:57:56] 2026-03-02 19:57:22,912 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-03-02 11:57:56] 2026-03-02 19:57:22,912 | INFO     | ..............................
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . Timing measurements:
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . get job = 0 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . initial setup = 24 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . payload setup = 24 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . stage-in = 0 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . payload execution = 68 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . stage-out = 2 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | . log creation = 0 s
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | ..............................
[2026-03-02 11:57:56] 2026-03-02 19:57:22,913 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 11:57:56] 2026-03-02 19:57:22,914 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036039273/pilotlog.txt
[2026-03-02 11:57:56] [end log extracts]
[2026-03-02 11:57:56] 2026-03-02 19:57:22,966 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-02 11:57:56] 2026-03-02 19:57:22,967 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-02 11:57:56] 2026-03-02 19:57:23,115 | INFO     | 
[2026-03-02 11:57:56] 2026-03-02 19:57:23,116 | INFO     | job summary report
[2026-03-02 11:57:56] 2026-03-02 19:57:23,116 | INFO     | --------------------------------------------------
[2026-03-02 11:57:56] 2026-03-02 19:57:23,116 | INFO     | PanDA job id: 7036039273
[2026-03-02 11:57:56] 2026-03-02 19:57:23,116 | INFO     | task id: 48700858
[2026-03-02 11:57:56] 2026-03-02 19:57:23,116 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-02 11:55:08,545 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-02 11:57:56] 2026-03-02 19:57:23,116 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 11:57:56] 2026-03-02 19:57:23,116 | INFO     | pilot state: failed 
[2026-03-02 11:57:56] 2026-03-02 19:57:23,116 | INFO     | transexitcode: 65
[2026-03-02 11:57:56] 2026-03-02 19:57:23,116 | INFO     | exeerrorcode: 65
[2026-03-02 11:57:56] 2026-03-02 19:57:23,117 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-02 11:57:56] 2026-03-02 19:57:23,117 | INFO     | exitcode: 65
[2026-03-02 11:57:56] 2026-03-02 19:57:23,117 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-02 11:57:56] 2026-03-02 19:57:23,117 | INFO     | cpuconsumptiontime: 22 s
[2026-03-02 11:57:56] 2026-03-02 19:57:23,117 | INFO     | nevents: 0
[2026-03-02 11:57:56] 2026-03-02 19:57:23,117 | INFO     | neventsw: 0
[2026-03-02 11:57:56] 2026-03-02 19:57:23,117 | INFO     | pid: 2208763
[2026-03-02 11:57:56] 2026-03-02 19:57:23,117 | INFO     | pgrp: 2208763
[2026-03-02 11:57:56] 2026-03-02 19:57:23,117 | INFO     | corecount: 12
[2026-03-02 11:57:56] 2026-03-02 19:57:23,117 | INFO     | event service: False
[2026-03-02 11:57:56] 2026-03-02 19:57:23,117 | INFO     | sizes: {0: 2281673, 1: 2281757, 2: 2282218, 3: 2282218, 97: 2305476, 98: 2305452, 101: 2309900, 102: 2309928, 220: 2310094}
[2026-03-02 11:57:56] 2026-03-02 19:57:23,117 | INFO     | --------------------------------------------------
[2026-03-02 11:57:56] 2026-03-02 19:57:23,118 | INFO     | 
[2026-03-02 11:57:56] 2026-03-02 19:57:23,118 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-02 11:57:56] 2026-03-02 19:57:23,143 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,144 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,144 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,144 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,144 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,144 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,144 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,144 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,145 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,145 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,145 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,145 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,145 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,145 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,145 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,145 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 11:57:56] 2026-03-02 19:57:23,145 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,146 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 11:57:56] 2026-03-02 19:57:23,146 | INFO     | job 7036039273 has completed (purged errors)
[2026-03-02 11:57:56] 2026-03-02 19:57:23,146 | INFO     | overall cleanup function is called
[2026-03-02 11:57:56] 2026-03-02 19:57:24,163 | INFO     | --- collectZombieJob: --- 10, [2208763]
[2026-03-02 11:57:56] 2026-03-02 19:57:24,163 | INFO     | zombie collector waiting for pid 2208763
[2026-03-02 11:57:56] 2026-03-02 19:57:24,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 11:57:56] 2026-03-02 19:57:24,163 | INFO     | collected zombie processes
[2026-03-02 11:57:56] 2026-03-02 19:57:24,163 | INFO     | will attempt to kill all subprocesses of pid=2208763
[2026-03-02 11:57:56] 2026-03-02 19:57:25,879 | INFO     | process IDs to be killed: [2208763] (in reverse order)
[2026-03-02 11:57:56] 2026-03-02 19:57:26,246 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 11:57:56] 2026-03-02 19:57:26,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 11:57:56] 2026-03-02 19:57:26,271 | INFO     | did not find any defunct processes belonging to 2208763
[2026-03-02 11:57:56] 2026-03-02 19:57:26,285 | INFO     | did not find any defunct processes belonging to 2208763
[2026-03-02 11:57:56] 2026-03-02 19:57:26,286 | INFO     | ready for new job
[2026-03-02 11:57:56] 2026-03-02 19:57:26,286 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 11:57:56] 2026-03-02 19:57:26,288 | INFO     | **************************************
[2026-03-02 11:57:56] 2026-03-02 19:57:26,288 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 11:57:56] 2026-03-02 19:57:26,288 | INFO     | **************************************
[2026-03-02 11:57:56] 2026-03-02 19:57:26,288 | INFO     | 
[2026-03-02 11:57:56] 2026-03-02 19:57:26,293 | INFO     | architecture information:
[2026-03-02 11:57:56] 2026-03-02 19:57:26,294 | INFO     | executing command: cat /etc/os-release
[2026-03-02 11:57:56] 2026-03-02 19:57:26,360 | INFO     | cat /etc/os-release:
[2026-03-02 11:57:56] NAME="CentOS Linux"
[2026-03-02 11:57:56] VERSION="7 (Core)"
[2026-03-02 11:57:56] ID="centos"
[2026-03-02 11:57:56] ID_LIKE="rhel fedora"
[2026-03-02 11:57:56] VERSION_ID="7"
[2026-03-02 11:57:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 11:57:56] ANSI_COLOR="0;31"
[2026-03-02 11:57:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 11:57:56] HOME_URL="https://www.centos.org/"
[2026-03-02 11:57:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 11:57:56] 
[2026-03-02 11:57:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 11:57:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 11:57:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 11:57:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 11:57:56] 
[2026-03-02 11:57:56] 2026-03-02 19:57:26,361 | INFO     | **************************************
[2026-03-02 11:57:56] 2026-03-02 19:57:26,864 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-02 11:57:56] 2026-03-02 19:57:26,925 | INFO     | sufficient remaining disk space (2050574254080 B)
[2026-03-02 11:57:56] 2026-03-02 19:57:26,925 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 11:57:56] 2026-03-02 19:57:26,925 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 11:57:56] 2026-03-02 19:57:26,925 | INFO     | update_server=False
[2026-03-02 11:57:56] 2026-03-02 19:57:26,926 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 11:57:56] 2026-03-02 19:57:26,978 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-02 11:57:56] 2026-03-02 19:57:26,978 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-02 11:57:56] 2026-03-02 19:57:26,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 11:57:56] 2026-03-02 19:57:26,979 | INFO     | will abort loop
[2026-03-02 11:57:56] 2026-03-02 19:57:27,048 | INFO     | all data control threads have been joined
[2026-03-02 11:57:56] 2026-03-02 19:57:27,644 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 11:57:56] 2026-03-02 19:57:27,902 | INFO     | all payload control threads have been joined
[2026-03-02 11:57:56] 2026-03-02 19:57:27,931 | INFO     | [job] retrieve thread has finished
[2026-03-02 11:57:56] 2026-03-02 19:57:27,984 | INFO     | [job] job monitor thread has finished
[2026-03-02 11:57:56] 2026-03-02 19:57:28,054 | INFO     | [data] control thread has finished
[2026-03-02 11:57:56] 2026-03-02 19:57:28,139 | INFO     | [payload] failed_post thread has finished
[2026-03-02 11:57:56] 2026-03-02 19:57:28,150 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 11:57:56] 2026-03-02 19:57:28,285 | INFO     | [payload] validate_post thread has finished
[2026-03-02 11:57:56] 2026-03-02 19:57:28,327 | INFO     | all job control threads have been joined
[2026-03-02 11:57:56] 2026-03-02 19:57:28,678 | INFO     | [job] validate thread has finished
[2026-03-02 11:57:56] 2026-03-02 19:57:28,679 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 11:57:56] 2026-03-02 19:57:28,826 | INFO     | [data] copytool_in thread has finished
[2026-03-02 11:57:56] 2026-03-02 19:57:28,908 | INFO     | [payload] control thread has finished
[2026-03-02 11:57:56] 2026-03-02 19:57:28,969 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 11:57:56] 2026-03-02 19:57:29,156 | INFO     | [job] queue monitor thread has finished
[2026-03-02 11:57:56] 2026-03-02 19:57:29,294 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 11:57:56] 2026-03-02 19:57:29,301 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 11:57:56] 2026-03-02 19:57:29,304 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 11:57:56] 2026-03-02 19:57:29,333 | INFO     | [job] control thread has finished
[2026-03-02 11:57:56] 2026-03-02 19:57:29,651 | INFO     | [data] copytool_out thread has finished
[2026-03-02 11:57:56] 2026-03-02 19:57:32,978 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 11:57:56] 2026-03-02 19:57:38,500 | INFO     | [monitor] cgroup control has ended
[2026-03-02 11:57:56] 2026-03-02 19:57:39,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139729668814656)>', '<ExcThread(monitor, started 139728833734400)>']
[2026-03-02 11:57:56] 2026-03-02 19:57:44,684 | INFO     | all workflow threads have been joined
[2026-03-02 11:57:56] 2026-03-02 19:57:44,687 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 11:57:56] 2026-03-02 19:57:44,687 | INFO     | traces error code: 0
[2026-03-02 11:57:56] 2026-03-02 19:57:44,687 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 11:57:56] 2026-03-02 19:57:55,756 | INFO     | PID=2203889 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 11:57:56] 2026-03-02 19:57:55,756 | INFO     | .. there are 34 such processes running
[2026-03-02 11:57:56] 2026-03-02 19:57:55,756 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 11:57:56] 2026-03-02 19:57:55,757 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 11:57:56] 2026-03-02 19:57:55,757 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 11:57:56] 2026-03-02 19:57:55,757 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 11:57:56] 2026-03-02 19:57:55,757 | INFO     | [monitor] control thread has ended
[2026-03-02 11:57:56] 2026-03-02 19:57:55,899 [wrapper] ==== pilot stdout END ====
[2026-03-02 11:57:56] 2026-03-02 19:57:55,902 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 11:57:56] 2026-03-02 19:57:55,906 [wrapper] pilotpid: 2203889
[2026-03-02 11:57:56] 2026-03-02 19:57:55,913 [wrapper] Pilot exit status: 0
[2026-03-02 11:57:56] 2026-03-02 19:57:55,999 [wrapper] pandaids: 7036039273
[2026-03-02 11:57:56] 2026-03-02 19:57:56,441 [wrapper] cleanup supervisor_pilot 2203895 2203890
[2026-03-02 11:57:56] 2026-03-02 19:57:56,450 [wrapper] Test setup, not cleaning
[2026-03-02 11:57:56] 2026-03-02 19:57:56,467 [wrapper] apfmon messages muted
[2026-03-02 11:57:56] 2026-03-02 19:57:56,474 [wrapper] ==== wrapper stdout END ====
[2026-03-02 11:57:56] 2026-03-02 19:57:56,478 [wrapper] ==== wrapper stderr END ====
[2026-03-02 11:57:56]  *** Error codes and diagnostics ***
[2026-03-02 11:57:56]     "exeErrorCode": 65,
[2026-03-02 11:57:56]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-02 11:57:56]     "pilotErrorCode": 1305,
[2026-03-02 11:57:56]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-02 11:57:56]  *** Listing of results directory ***
[2026-03-02 11:57:56] total 188424
[2026-03-02 11:57:56] -rw-r--r--. 1 boinc boinc    584627 Mar  2 09:50 pilot3.tar.gz
[2026-03-02 11:57:56] -rwx------. 1 boinc boinc     36322 Mar  2 09:53 runpilot2-wrapper.sh
[2026-03-02 11:57:56] -rw-r--r--. 1 boinc boinc      5111 Mar  2 09:53 queuedata.json
[2026-03-02 11:57:56] -rw-r--r--. 1 boinc boinc       100 Mar  2 11:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 11:57:56] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 11:52 run_atlas
[2026-03-02 11:57:56] -rw-r--r--. 1 boinc boinc       105 Mar  2 11:52 job.xml
[2026-03-02 11:57:56] -rw-r--r--. 1 boinc boinc      6594 Mar  2 11:52 init_data.xml
[2026-03-02 11:57:56] -rw-r--r--. 2 boinc boinc 188809496 Mar  2 11:52 EVNT.48700856._000092.pool.root.1
[2026-03-02 11:57:56] drwxrwx--x. 2 boinc boinc      4096 Mar  2 11:52 shared
[2026-03-02 11:57:56] -rw-r--r--. 2 boinc boinc    597937 Mar  2 11:52 input.tar.gz
[2026-03-02 11:57:56] -rw-r--r--. 2 boinc boinc     15845 Mar  2 11:52 start_atlas.sh
[2026-03-02 11:57:56] -rw-r--r--. 1 boinc boinc         0 Mar  2 11:52 boinc_lockfile
[2026-03-02 11:57:56] -rw-r--r--. 1 boinc boinc      2520 Mar  2 11:52 pandaJob.out
[2026-03-02 11:57:56] -rw-------. 1 boinc boinc    998470 Mar  2 11:53 agis_schedconf.cvmfs.json
[2026-03-02 11:57:56] -rw-------. 1 boinc boinc   1512931 Mar  2 11:53 agis_ddmendpoints.agis.ALL.json
[2026-03-02 11:57:56] -rw-------. 1 boinc boinc       445 Mar  2 11:53 workernode_map.json
[2026-03-02 11:57:56] drwx------. 5 boinc boinc      4096 Mar  2 11:53 pilot3
[2026-03-02 11:57:56] -rw-r--r--. 1 boinc boinc       524 Mar  2 11:55 boinc_task_state.xml
[2026-03-02 11:57:56] -rw-------. 1 boinc boinc       964 Mar  2 11:55 memory_monitor_summary.json
[2026-03-02 11:57:56] -rw-------. 1 boinc boinc     21324 Mar  2 11:55 log.48700858._002322.job.log.tgz.1
[2026-03-02 11:57:56] -rw-------. 1 boinc boinc        95 Mar  2 11:57 pilot_heartbeat.json
[2026-03-02 11:57:56] -rw-------. 1 boinc boinc      7031 Mar  2 11:57 heartbeat.json
[2026-03-02 11:57:56] -rw-r--r--. 1 boinc boinc      8192 Mar  2 11:57 boinc_mmap_file
[2026-03-02 11:57:56] -rw-r--r--. 1 boinc boinc        23 Mar  2 11:57 wrapper_checkpoint.txt
[2026-03-02 11:57:56] -rw-------. 1 boinc boinc       823 Mar  2 11:57 pilotlog.txt
[2026-03-02 11:57:56] -rw-------. 1 boinc boinc     87953 Mar  2 11:57 log.48700858._002322.job.log.1
[2026-03-02 11:57:56] -rw-------. 1 boinc boinc       188 Mar  2 11:57 output.list
[2026-03-02 11:57:56] -rw-r--r--. 1 boinc boinc       620 Mar  2 11:57 runtime_log
[2026-03-02 11:57:56] -rw-------. 1 boinc boinc    122880 Mar  2 11:57 result.tar.gz
[2026-03-02 11:57:56] -rw-------. 1 boinc boinc       643 Mar  2 11:57 CpWLDmadMH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmR9BLDmrnJXnn.diag
[2026-03-02 11:57:56] -rw-r--r--. 1 boinc boinc      8635 Mar  2 11:57 runtime_log.err
[2026-03-02 11:57:56] -rw-r--r--. 1 boinc boinc     21840 Mar  2 11:57 stderr.txt
[2026-03-02 11:57:56] No HITS result produced
[2026-03-02 11:57:56]  *** Contents of shared directory: ***
[2026-03-02 11:57:57] total 185112
[2026-03-02 11:57:57] -rw-r--r--. 2 boinc boinc 188809496 Mar  2 11:52 ATLAS.root_0
[2026-03-02 11:57:57] -rw-r--r--. 2 boinc boinc    597937 Mar  2 11:52 input.tar.gz
[2026-03-02 11:57:57] -rw-r--r--. 2 boinc boinc     15845 Mar  2 11:52 start_atlas.sh
[2026-03-02 11:57:57] -rw-------. 1 boinc boinc    122880 Mar  2 11:57 result.tar.gz
11:57:58 (2200089): run_atlas exited; CPU time 32.559051
11:57:58 (2200089): called boinc_finish(0)

</stderr_txt>
]]>

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