Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:56:42 (2386362): wrapper (7.7.26015): starting
21:56:42 (2386362): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 21:56:42] Arguments: --nthreads 4
[2026-03-02 21:56:42] Threads: 4
[2026-03-02 21:56:42] Checking for CVMFS
[2026-03-02 21:56:42] No cvmfs_config command found, will try listing directly
[2026-03-02 21:56:42] CVMFS is ok
[2026-03-02 21:56:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 21:56:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 21:56:42] Further information can be found at the LHC@home message board.
[2026-03-02 21:56:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 21:56:42] Checking for apptainer binary...
[2026-03-02 21:56:42] which: no apptainer in ((null))
[2026-03-02 21:56:42] apptainer is not installed, using version from CVMFS
[2026-03-02 21:56:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 21:56:42] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-02 21:56:42] apptainer works
[2026-03-02 21:56:42] Set ATHENA_PROC_NUMBER=4
[2026-03-02 21:56:42] Set ATHENA_CORE_NUMBER=4
[2026-03-02 21:56:42] Starting ATLAS job with PandaID=7036039403
[2026-03-02 21:56:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 23:10:06]  *** The last 200 lines of the pilot log: ***
[2026-03-02 23:10:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-02 23:10:07]  replicas=None
[2026-03-02 23:10:07]  scope=mc23_13p6TeV
[2026-03-02 23:10:07]  status=None
[2026-03-02 23:10:07]  status_code=0
[2026-03-02 23:10:07]  storage_token=
[2026-03-02 23:10:07]  surl=/var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7036039403/log.48700858._002411.job.log.tgz.1
[2026-03-02 23:10:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7f/a6/log.48700858._002411.job.log.tgz.1
[2026-03-02 23:10:07]  workdir=None
[2026-03-02 23:10:07] ]
[2026-03-02 23:10:07] 2026-03-02 22:09:00,157 | INFO     | transferring file log.48700858._002411.job.log.tgz.1 from /var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7036039403/log.48700858._002411.job.log.tgz.1 to /var/lib/
[2026-03-02 23:10:07] 2026-03-02 22:09:00,157 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7036039403/log.48700858._002411.job.log.tgz.1 /var/lib/boinc/var/slot124/slots/0/
[2026-03-02 23:10:07] 2026-03-02 22:09:00,174 | INFO     | adding to output.list: log.48700858._002411.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7f/a6/log.48700858._002411.job.log.tg
[2026-03-02 23:10:07] 2026-03-02 22:09:00,175 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-02 23:10:07] 2026-03-02 22:09:00,175 | INFO     | summary of transferred files:
[2026-03-02 23:10:07] 2026-03-02 22:09:00,175 | INFO     |  -- lfn=log.48700858._002411.job.log.tgz.1, status_code=0, status=transferred
[2026-03-02 23:10:07] 2026-03-02 22:09:00,175 | INFO     | stage-out finished correctly
[2026-03-02 23:10:07] 2026-03-02 22:09:00,572 | INFO     | monitor loop #312: job 0:7036039403 is in state 'finished'
[2026-03-02 23:10:07] 2026-03-02 22:09:00,572 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-02 23:10:07] 2026-03-02 22:09:01,281 | INFO     | PID=2391333 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-02 23:10:07] 2026-03-02 22:09:01,281 | INFO     | .. there are 53 such processes running
[2026-03-02 23:10:07] 2026-03-02 22:09:02,282 | INFO     | time since job start (4328s) is within the limit (349056.0s)
[2026-03-02 23:10:07] 2026-03-02 22:09:03,075 | INFO     | monitor loop #313: job 0:7036039403 is in state 'finished'
[2026-03-02 23:10:07] 2026-03-02 22:09:03,075 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-02 23:10:07] 2026-03-02 22:09:03,569 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-02 23:10:07] 2026-03-02 22:09:04,287 | INFO     | time since job start (4330s) is within the limit (349056.0s)
[2026-03-02 23:10:07] 2026-03-02 22:09:05,578 | INFO     | monitor loop #314: job 0:7036039403 is in state 'finished'
[2026-03-02 23:10:07] 2026-03-02 22:09:05,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-02 23:10:07] 2026-03-02 22:09:06,294 | INFO     | time since job start (4332s) is within the limit (349056.0s)
[2026-03-02 23:10:07] 2026-03-02 22:09:06,410 | INFO     | job 7036039403 has state=finished
[2026-03-02 23:10:07] 2026-03-02 22:09:06,411 | INFO     | preparing for final server update for job 7036039403 in state='finished'
[2026-03-02 23:10:07] 2026-03-02 22:09:06,411 | INFO     | reading metadata from: /var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7036039403/jobReport.json
[2026-03-02 23:10:07] 2026-03-02 22:09:06,412 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot124/slots/0/workernode_map.json
[2026-03-02 23:10:07] 2026-03-02 22:09:06,412 | INFO     | this job has now completed (state=finished)
[2026-03-02 23:10:07] 2026-03-02 22:09:06,412 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-02 23:10:07] 2026-03-02 22:09:06,412 | INFO     | log transfer has been attempted: DONE
[2026-03-02 23:10:07] 2026-03-02 22:09:06,412 | INFO     | job 7036039403 has finished - writing final server update
[2026-03-02 23:10:07] 2026-03-02 22:09:06,413 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_19255/.job.ad'
[2026-03-02 23:10:07] 2026-03-02 22:09:06,413 | INFO     | total number of processed events: 400 (read)
[2026-03-02 23:10:07] 2026-03-02 22:09:06,431 | INFO     | using path: /var/lib/boinc/var/slot124/slots/0/PanDA_Pilot-7036039403/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 23:10:07] 2026-03-02 22:09:06,431 | INFO     | extracted standard info from prmon json
[2026-03-02 23:10:07] 2026-03-02 22:09:06,431 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 23:10:07] 2026-03-02 22:09:06,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 23:10:07] 2026-03-02 22:09:06,431 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 23:10:07] 2026-03-02 22:09:06,431 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 23:10:07] 2026-03-02 22:09:06,432 | INFO     | fitting pss+swap vs Time
[2026-03-02 23:10:07] 2026-03-02 22:09:06,433 | INFO     | sum of square deviations: 81266640.0
[2026-03-02 23:10:07] 2026-03-02 22:09:06,433 | INFO     | sum of deviations: 247869840.0
[2026-03-02 23:10:07] 2026-03-02 22:09:06,433 | INFO     | mean x: 1772487260.5
[2026-03-02 23:10:07] 2026-03-02 22:09:06,433 | INFO     | mean y: 2315127.40625
[2026-03-02 23:10:07] 2026-03-02 22:09:06,433 | INFO     | intersect: -5403914706.412071
[2026-03-02 23:10:07] 2026-03-02 22:09:06,433 | INFO     | chi2: 0.0002861840865128362
[2026-03-02 23:10:07] 2026-03-02 22:09:06,433 | INFO     | current memory leak: 3.05 B/s (using 64 data points, chi2=0.00)
[2026-03-02 23:10:07] 2026-03-02 22:09:06,433 | INFO     | could have reported an average CPU frequency of 3631 MHz (6 samples)
[2026-03-02 23:10:07] 2026-03-02 22:09:06,433 | INFO     | ..............................
[2026-03-02 23:10:07] 2026-03-02 22:09:06,433 | INFO     | . Timing measurements:
[2026-03-02 23:10:07] 2026-03-02 22:09:06,433 | INFO     | . get job = 0 s
[2026-03-02 23:10:07] 2026-03-02 22:09:06,433 | INFO     | . initial setup = 4 s
[2026-03-02 23:10:07] 2026-03-02 22:09:06,433 | INFO     | . payload setup = 4 s
[2026-03-02 23:10:07] 2026-03-02 22:09:06,433 | INFO     | . stage-in = 0 s
[2026-03-02 23:10:07] 2026-03-02 22:09:06,433 | INFO     | . payload execution = 4305 s
[2026-03-02 23:10:07] 2026-03-02 22:09:06,433 | INFO     | . stage-out = 0 s
[2026-03-02 23:10:07] 2026-03-02 22:09:06,433 | INFO     | . log creation = 0 s
[2026-03-02 23:10:07] 2026-03-02 22:09:06,434 | INFO     | ..............................
[2026-03-02 23:10:07] 2026-03-02 22:09:06,586 | INFO     | 
[2026-03-02 23:10:07] 2026-03-02 22:09:06,586 | INFO     | job summary report
[2026-03-02 23:10:07] 2026-03-02 22:09:06,586 | INFO     | --------------------------------------------------
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | PanDA job id: 7036039403
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | task id: 48700858
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | errors: (none)
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | pilot state: finished 
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | transexitcode: 0
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | exeerrorcode: 0
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | exeerrordiag: 
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | exitcode: 0
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | exitmsg: OK
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | cpuconsumptiontime: 16316 s
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | nevents: 400
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | neventsw: 0
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | pid: 2420466
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | pgrp: 2420466
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | corecount: 4
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | event service: False
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | sizes: {0: 2282177, 11: 2282177, 4313: 2308206, 4315: 2317228, 4318: 2317284, 4321: 2317478}
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | --------------------------------------------------
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | 
[2026-03-02 23:10:07] 2026-03-02 22:09:06,587 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot124/slots/0
[2026-03-02 23:10:07] 2026-03-02 22:09:06,612 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,612 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,612 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,612 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | job 7036039403 has completed (purged errors)
[2026-03-02 23:10:07] 2026-03-02 22:09:06,613 | INFO     | overall cleanup function is called
[2026-03-02 23:10:07] 2026-03-02 22:09:07,620 | INFO     | --- collectZombieJob: --- 10, [2420466]
[2026-03-02 23:10:07] 2026-03-02 22:09:07,620 | INFO     | zombie collector waiting for pid 2420466
[2026-03-02 23:10:07] 2026-03-02 22:09:07,620 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 23:10:07] 2026-03-02 22:09:07,620 | INFO     | collected zombie processes
[2026-03-02 23:10:07] 2026-03-02 22:09:07,620 | INFO     | will attempt to kill all subprocesses of pid=2420466
[2026-03-02 23:10:07] 2026-03-02 22:09:08,103 | INFO     | process IDs to be killed: [2420466] (in reverse order)
[2026-03-02 23:10:07] 2026-03-02 22:09:08,326 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 23:10:07] 2026-03-02 22:09:08,327 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 23:10:07] 2026-03-02 22:09:08,356 | INFO     | did not find any defunct processes belonging to 2420466
[2026-03-02 23:10:07] 2026-03-02 22:09:08,383 | INFO     | did not find any defunct processes belonging to 2420466
[2026-03-02 23:10:07] 2026-03-02 22:09:08,383 | INFO     | ready for new job
[2026-03-02 23:10:07] 2026-03-02 22:09:08,384 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 23:10:07] 2026-03-02 22:09:08,385 | INFO     | **************************************
[2026-03-02 23:10:07] 2026-03-02 22:09:08,385 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 23:10:07] 2026-03-02 22:09:08,385 | INFO     | **************************************
[2026-03-02 23:10:07] 2026-03-02 22:09:08,385 | INFO     | 
[2026-03-02 23:10:07] 2026-03-02 22:09:08,391 | INFO     | architecture information:
[2026-03-02 23:10:07] 2026-03-02 22:09:08,391 | INFO     | executing command: cat /etc/os-release
[2026-03-02 23:10:07] 2026-03-02 22:09:08,409 | INFO     | cat /etc/os-release:
[2026-03-02 23:10:07] NAME="CentOS Linux"
[2026-03-02 23:10:07] VERSION="7 (Core)"
[2026-03-02 23:10:07] ID="centos"
[2026-03-02 23:10:07] ID_LIKE="rhel fedora"
[2026-03-02 23:10:07] VERSION_ID="7"
[2026-03-02 23:10:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 23:10:07] ANSI_COLOR="0;31"
[2026-03-02 23:10:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 23:10:07] HOME_URL="https://www.centos.org/"
[2026-03-02 23:10:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 23:10:07] 
[2026-03-02 23:10:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 23:10:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 23:10:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 23:10:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 23:10:07] 
[2026-03-02 23:10:07] 2026-03-02 22:09:08,409 | INFO     | **************************************
[2026-03-02 23:10:07] 2026-03-02 22:09:08,910 | INFO     | executing command: df -mP /var/lib/boinc/var/slot124/slots/0
[2026-03-02 23:10:07] 2026-03-02 22:09:08,925 | INFO     | sufficient remaining disk space (227780067328 B)
[2026-03-02 23:10:07] 2026-03-02 22:09:08,925 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 23:10:07] 2026-03-02 22:09:08,925 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 23:10:07] 2026-03-02 22:09:08,925 | INFO     | update_server=False
[2026-03-02 23:10:07] 2026-03-02 22:09:08,925 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 23:10:07] 2026-03-02 22:09:08,926 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 23:10:07] 2026-03-02 22:09:09,086 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 23:10:07] 2026-03-02 22:09:09,086 | INFO     | aborting loop
[2026-03-02 23:10:07] 2026-03-02 22:09:09,598 | INFO     | all data control threads have been joined
[2026-03-02 23:10:07] 2026-03-02 22:09:09,629 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 23:10:07] 2026-03-02 22:09:09,693 | INFO     | all payload control threads have been joined
[2026-03-02 23:10:07] 2026-03-02 22:09:09,930 | INFO     | [job] retrieve thread has finished
[2026-03-02 23:10:07] 2026-03-02 22:09:10,091 | INFO     | [job] job monitor thread has finished
[2026-03-02 23:10:07] 2026-03-02 22:09:10,359 | INFO     | all job control threads have been joined
[2026-03-02 23:10:07] 2026-03-02 22:09:10,553 | INFO     | [payload] validate_post thread has finished
[2026-03-02 23:10:07] 2026-03-02 22:09:10,604 | INFO     | [data] control thread has finished
[2026-03-02 23:10:07] 2026-03-02 22:09:10,622 | INFO     | [job] validate thread has finished
[2026-03-02 23:10:07] 2026-03-02 22:09:10,629 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 23:10:07] 2026-03-02 22:09:10,698 | INFO     | [payload] control thread has finished
[2026-03-02 23:10:07] 2026-03-02 22:09:10,757 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 23:10:07] 2026-03-02 22:09:10,931 | INFO     | [data] copytool_out thread has finished
[2026-03-02 23:10:07] 2026-03-02 22:09:11,116 | INFO     | [data] copytool_in thread has finished
[2026-03-02 23:10:07] 2026-03-02 22:09:11,131 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 23:10:07] 2026-03-02 22:09:11,364 | INFO     | [job] control thread has finished
[2026-03-02 23:10:07] 2026-03-02 22:09:11,491 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 23:10:07] 2026-03-02 22:09:11,510 | INFO     | [payload] failed_post thread has finished
[2026-03-02 23:10:07] 2026-03-02 22:09:12,496 | INFO     | [job] queue monitor thread has finished
[2026-03-02 23:10:07] 2026-03-02 22:09:13,634 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 23:10:07] 2026-03-02 22:09:19,328 | INFO     | job.realtimelogging is not enabled
[2026-03-02 23:10:07] 2026-03-02 22:09:20,333 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 23:10:07] 2026-03-02 22:09:39,935 | INFO     | PID=2391333 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 23:10:07] 2026-03-02 22:09:39,935 | INFO     | .. there are 53 such processes running
[2026-03-02 23:10:07] 2026-03-02 22:09:39,935 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 23:10:07] 2026-03-02 22:09:39,935 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 23:10:07] 2026-03-02 22:09:39,936 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 23:10:07] 2026-03-02 22:10:00,912 | INFO     | [monitor] cgroup control has ended
[2026-03-02 23:10:07] 2026-03-02 22:10:01,550 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22703771039552)>', '<ExcThread(monitor, started 22703463458560)>']
[2026-03-02 23:10:07] 2026-03-02 22:10:02,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 23:10:07] 2026-03-02 22:10:02,050 | INFO     | [monitor] control thread has ended
[2026-03-02 23:10:07] 2026-03-02 22:10:06,575 | INFO     | all workflow threads have been joined
[2026-03-02 23:10:07] 2026-03-02 22:10:06,575 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 23:10:07] 2026-03-02 22:10:06,575 | INFO     | traces error code: 0
[2026-03-02 23:10:07] 2026-03-02 22:10:06,576 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 23:10:07] 2026-03-02 22:10:06,790 [wrapper] ==== pilot stdout END ====
[2026-03-02 23:10:07] 2026-03-02 22:10:06,793 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 23:10:07] 2026-03-02 22:10:06,797 [wrapper] pilotpid: 2391333
[2026-03-02 23:10:07] 2026-03-02 22:10:06,800 [wrapper] Pilot exit status: 0
[2026-03-02 23:10:07] 2026-03-02 22:10:06,810 [wrapper] pandaids: 7036039403
[2026-03-02 23:10:07] 2026-03-02 22:10:06,935 [wrapper] cleanup supervisor_pilot 2905877 2391334
[2026-03-02 23:10:07] 2026-03-02 22:10:06,938 [wrapper] Test setup, not cleaning
[2026-03-02 23:10:07] 2026-03-02 22:10:06,941 [wrapper] apfmon messages muted
[2026-03-02 23:10:07] 2026-03-02 22:10:06,944 [wrapper] ==== wrapper stdout END ====
[2026-03-02 23:10:07] 2026-03-02 22:10:06,946 [wrapper] ==== wrapper stderr END ====
[2026-03-02 23:10:07]  *** Error codes and diagnostics ***
[2026-03-02 23:10:07]     "exeErrorCode": 0,
[2026-03-02 23:10:07]     "exeErrorDiag": "",
[2026-03-02 23:10:07]     "pilotErrorCode": 0,
[2026-03-02 23:10:07]     "pilotErrorDiag": "",
[2026-03-02 23:10:07]  *** Listing of results directory ***
[2026-03-02 23:10:07] total 340828
[2026-03-02 23:10:07] -rw-r--r--. 1 boinc boinc    584627 Mar  2 18:50 pilot3.tar.gz
[2026-03-02 23:10:07] -rwx------. 1 boinc boinc     36322 Mar  2 18:53 runpilot2-wrapper.sh
[2026-03-02 23:10:07] -rw-r--r--. 1 boinc boinc      5111 Mar  2 18:53 queuedata.json
[2026-03-02 23:10:07] -rw-r--r--. 1 boinc boinc       100 Mar  2 21:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 23:10:07] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 21:56 run_atlas
[2026-03-02 23:10:07] -rw-r--r--. 1 boinc boinc       105 Mar  2 21:56 job.xml
[2026-03-02 23:10:07] -rw-r--r--. 2 boinc boinc     15845 Mar  2 21:56 start_atlas.sh
[2026-03-02 23:10:07] drwxrwx--x. 2 boinc boinc      4096 Mar  2 21:56 shared
[2026-03-02 23:10:07] -rw-r--r--. 2 boinc boinc    597940 Mar  2 21:56 input.tar.gz
[2026-03-02 23:10:07] -rw-r--r--. 1 boinc boinc      6701 Mar  2 21:56 init_data.xml
[2026-03-02 23:10:07] -rw-r--r--. 2 boinc boinc 190043388 Mar  2 21:56 EVNT.48700856._000096.pool.root.1
[2026-03-02 23:10:07] -rw-r--r--. 1 boinc boinc         0 Mar  2 21:56 boinc_lockfile
[2026-03-02 23:10:07] -rw-r--r--. 1 boinc boinc      2520 Mar  2 21:56 pandaJob.out
[2026-03-02 23:10:07] -rw-------. 1 boinc boinc    998454 Mar  2 21:56 agis_schedconf.cvmfs.json
[2026-03-02 23:10:07] -rw-------. 1 boinc boinc   1512931 Mar  2 21:56 agis_ddmendpoints.agis.ALL.json
[2026-03-02 23:10:07] -rw-------. 1 boinc boinc       445 Mar  2 21:56 workernode_map.json
[2026-03-02 23:10:07] drwx------. 5 boinc boinc      4096 Mar  2 21:56 pilot3
[2026-03-02 23:10:07] -rw-------. 1 boinc boinc 153230320 Mar  2 23:08 HITS.48700858._002411.pool.root.1
[2026-03-02 23:10:07] -rw-------. 1 boinc boinc      1029 Mar  2 23:08 memory_monitor_summary.json
[2026-03-02 23:10:07] -rw-------. 1 boinc boinc    260446 Mar  2 23:08 log.48700858._002411.job.log.tgz.1
[2026-03-02 23:10:07] -rw-r--r--. 1 boinc boinc       529 Mar  2 23:09 boinc_task_state.xml
[2026-03-02 23:10:07] -rw-------. 1 boinc boinc        95 Mar  2 23:09 pilot_heartbeat.json
[2026-03-02 23:10:07] -rw-------. 1 boinc boinc      6345 Mar  2 23:09 heartbeat.json
[2026-03-02 23:10:07] -rw-r--r--. 1 boinc boinc      8192 Mar  2 23:10 boinc_mmap_file
[2026-03-02 23:10:07] -rw-r--r--. 1 boinc boinc        27 Mar  2 23:10 wrapper_checkpoint.txt
[2026-03-02 23:10:07] -rw-------. 1 boinc boinc      4903 Mar  2 23:10 pilotlog.txt
[2026-03-02 23:10:07] -rw-------. 1 boinc boinc    639995 Mar  2 23:10 log.48700858._002411.job.log.1
[2026-03-02 23:10:07] -rw-------. 1 boinc boinc       357 Mar  2 23:10 output.list
[2026-03-02 23:10:07] -rw-r--r--. 1 boinc boinc       620 Mar  2 23:10 runtime_log
[2026-03-02 23:10:07] -rw-------. 1 boinc boinc    921600 Mar  2 23:10 result.tar.gz
[2026-03-02 23:10:07] -rw-r--r--. 1 boinc boinc      9221 Mar  2 23:10 runtime_log.err
[2026-03-02 23:10:07] -rw-------. 1 boinc boinc       661 Mar  2 23:10 9ztMDmadMH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmVBELDm0nbGdm.diag
[2026-03-02 23:10:07] -rw-r--r--. 1 boinc boinc     21830 Mar  2 23:10 stderr.txt
[2026-03-02 23:10:07] HITS file was successfully produced:
[2026-03-02 23:10:07] -rw-------. 1 boinc boinc 153230320 Mar  2 23:08 shared/HITS.pool.root.1
[2026-03-02 23:10:07]  *** Contents of shared directory: ***
[2026-03-02 23:10:07] total 336740
[2026-03-02 23:10:07] -rw-r--r--. 2 boinc boinc     15845 Mar  2 21:56 start_atlas.sh
[2026-03-02 23:10:07] -rw-r--r--. 2 boinc boinc    597940 Mar  2 21:56 input.tar.gz
[2026-03-02 23:10:07] -rw-r--r--. 2 boinc boinc 190043388 Mar  2 21:56 ATLAS.root_0
[2026-03-02 23:10:07] -rw-------. 1 boinc boinc 153230320 Mar  2 23:08 HITS.pool.root.1
[2026-03-02 23:10:07] -rw-------. 1 boinc boinc    921600 Mar  2 23:10 result.tar.gz
23:10:08 (2386362): run_atlas exited; CPU time 16496.620173
23:10:08 (2386362): called boinc_finish(0)

</stderr_txt>
]]>

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