Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:51:31 (937759): wrapper (7.7.26015): starting
02:51:31 (937759): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 02:51:31] Arguments: --nthreads 4
[2026-03-04 02:51:31] Threads: 4
[2026-03-04 02:51:31] Checking for CVMFS
[2026-03-04 02:51:31] No cvmfs_config command found, will try listing directly
[2026-03-04 02:51:31] CVMFS is ok
[2026-03-04 02:51:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 02:51:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 02:51:31] Further information can be found at the LHC@home message board.
[2026-03-04 02:51:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 02:51:31] Checking for apptainer binary...
[2026-03-04 02:51:31] which: no apptainer in ((null))
[2026-03-04 02:51:31] apptainer is not installed, using version from CVMFS
[2026-03-04 02:51:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 02:51:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-03-04 02:51:32] apptainer works
[2026-03-04 02:51:32] Set ATHENA_PROC_NUMBER=4
[2026-03-04 02:51:32] Set ATHENA_CORE_NUMBER=4
[2026-03-04 02:51:32] Starting ATLAS job with PandaID=7036003359
[2026-03-04 02:51:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 07:41:27]  *** The last 200 lines of the pilot log: ***
[2026-03-04 07:41:27] 2026-03-04 06:40:25,682 | INFO     | job 7036003359 has finished - writing final server update
[2026-03-04 07:41:27] 2026-03-04 06:40:25,682 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3553349/.job.ad'
[2026-03-04 07:41:27] 2026-03-04 06:40:25,682 | INFO     | total number of processed events: 400 (read)
[2026-03-04 07:41:27] 2026-03-04 06:40:25,705 | INFO     | using path: /scratch/boinc/var/slot96/slots/0/PanDA_Pilot-7036003359/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 07:41:27] 2026-03-04 06:40:25,705 | INFO     | extracted standard info from prmon json
[2026-03-04 07:41:27] 2026-03-04 06:40:25,705 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 07:41:27] 2026-03-04 06:40:25,705 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 07:41:27] 2026-03-04 06:40:25,706 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 07:41:27] 2026-03-04 06:40:25,706 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 07:41:27] 2026-03-04 06:40:25,711 | INFO     | fitting pss+swap vs Time
[2026-03-04 07:41:27] 2026-03-04 06:40:25,711 | INFO     | sum of square deviations: 7102775035.0
[2026-03-04 07:41:27] 2026-03-04 06:40:25,713 | INFO     | sum of deviations: 13935742830.499996
[2026-03-04 07:41:27] 2026-03-04 06:40:25,714 | INFO     | mean x: 1772597770.5
[2026-03-04 07:41:27] 2026-03-04 06:40:25,714 | INFO     | mean y: 2328290.2640845072
[2026-03-04 07:41:27] 2026-03-04 06:40:25,714 | INFO     | intersect: -3475533045.605418
[2026-03-04 07:41:27] 2026-03-04 06:40:25,714 | INFO     | chi2: 2.0678103398302277
[2026-03-04 07:41:27] 2026-03-04 06:40:25,715 | INFO     | sum of square deviations: 6734191380.0
[2026-03-04 07:41:27] 2026-03-04 06:40:25,717 | INFO     | sum of deviations: 31304623672.000004
[2026-03-04 07:41:27] 2026-03-04 06:40:25,717 | INFO     | mean x: 1772597618.0
[2026-03-04 07:41:27] 2026-03-04 06:40:25,717 | INFO     | mean y: 2335371.419354839
[2026-03-04 07:41:27] 2026-03-04 06:40:25,717 | INFO     | intersect: -8237778136.221056
[2026-03-04 07:41:27] 2026-03-04 06:40:25,718 | INFO     | chi2: 1.2784230601559055
[2026-03-04 07:41:27] 2026-03-04 06:40:25,718 | INFO     | current chi2=1.2784230601559055 (change=38.17503300322663 %)
[2026-03-04 07:41:27] 2026-03-04 06:40:25,718 | INFO     | sum of square deviations: 6378584712.5
[2026-03-04 07:41:27] 2026-03-04 06:40:25,720 | INFO     | sum of deviations: 30570236010.0
[2026-03-04 07:41:27] 2026-03-04 06:40:25,720 | INFO     | mean x: 1772597465.5
[2026-03-04 07:41:27] 2026-03-04 06:40:25,720 | INFO     | mean y: 2335056.4452554747
[2026-03-04 07:41:27] 2026-03-04 06:40:25,720 | INFO     | intersect: -8493079728.102506
[2026-03-04 07:41:27] 2026-03-04 06:40:25,721 | INFO     | chi2: 1.2788305350840237
[2026-03-04 07:41:27] 2026-03-04 06:40:25,721 | INFO     | current chi2=1.2788305350840237 (change=-0.031873246096524574 %)
[2026-03-04 07:41:27] 2026-03-04 06:40:25,721 | INFO     | right removable region: 273
[2026-03-04 07:41:27] 2026-03-04 06:40:25,721 | INFO     | sum of square deviations: 6734191380.0
[2026-03-04 07:41:27] 2026-03-04 06:40:25,723 | INFO     | sum of deviations: -19556443535.0
[2026-03-04 07:41:27] 2026-03-04 06:40:25,723 | INFO     | mean x: 1772597923.0
[2026-03-04 07:41:27] 2026-03-04 06:40:25,724 | INFO     | mean y: 2342009.2580645164
[2026-03-04 07:41:27] 2026-03-04 06:40:25,724 | INFO     | intersect: 5150058971.143365
[2026-03-04 07:41:27] 2026-03-04 06:40:25,724 | INFO     | chi2: 0.8213451775405471
[2026-03-04 07:41:27] 2026-03-04 06:40:25,724 | INFO     | current chi2=0.8213451775405471 (change=60.279472361668255 %)
[2026-03-04 07:41:27] 2026-03-04 06:40:25,724 | INFO     | sum of square deviations: 6378584712.5
[2026-03-04 07:41:27] 2026-03-04 06:40:25,726 | INFO     | sum of deviations: -17470062060.0
[2026-03-04 07:41:27] 2026-03-04 06:40:25,727 | INFO     | mean x: 1772598075.5
[2026-03-04 07:41:27] 2026-03-04 06:40:25,727 | INFO     | mean y: 2341110.0364963505
[2026-03-04 07:41:27] 2026-03-04 06:40:25,727 | INFO     | intersect: 4857242280.469382
[2026-03-04 07:41:27] 2026-03-04 06:40:25,727 | INFO     | chi2: 0.8195207625961655
[2026-03-04 07:41:27] 2026-03-04 06:40:25,727 | INFO     | current chi2=0.8195207625961655 (change=0.22212523970065132 %)
[2026-03-04 07:41:27] 2026-03-04 06:40:25,727 | INFO     | left removable region: 20
[2026-03-04 07:41:27] 2026-03-04 06:40:25,728 | INFO     | sum of square deviations: 5021496942.0
[2026-03-04 07:41:27] 2026-03-04 06:40:25,729 | INFO     | sum of deviations: 4788167855.000002
[2026-03-04 07:41:27] 2026-03-04 06:40:25,729 | INFO     | mean x: 1772598045.0
[2026-03-04 07:41:27] 2026-03-04 06:40:25,730 | INFO     | mean y: 2346070.7628458496
[2026-03-04 07:41:27] 2026-03-04 06:40:25,730 | INFO     | intersect: -1687886359.3149433
[2026-03-04 07:41:27] 2026-03-04 06:40:25,730 | INFO     | chi2: 0.007445128176626691
[2026-03-04 07:41:27] 2026-03-04 06:40:25,730 | INFO     | current memory leak: 0.95 B/s (using 253 data points, chi2=0.01)
[2026-03-04 07:41:27] 2026-03-04 06:40:25,730 | INFO     | could have reported an average CPU frequency of 2760 MHz (13 samples)
[2026-03-04 07:41:27] 2026-03-04 06:40:25,731 | INFO     | ..............................
[2026-03-04 07:41:27] 2026-03-04 06:40:25,731 | INFO     | . Timing measurements:
[2026-03-04 07:41:27] 2026-03-04 06:40:25,731 | INFO     | . get job = 0 s
[2026-03-04 07:41:27] 2026-03-04 06:40:25,731 | INFO     | . initial setup = 7 s
[2026-03-04 07:41:27] 2026-03-04 06:40:25,731 | INFO     | . payload setup = 7 s
[2026-03-04 07:41:27] 2026-03-04 06:40:25,731 | INFO     | . stage-in = 0 s
[2026-03-04 07:41:27] 2026-03-04 06:40:25,731 | INFO     | . payload execution = 17287 s
[2026-03-04 07:41:27] 2026-03-04 06:40:25,731 | INFO     | . stage-out = 1 s
[2026-03-04 07:41:27] 2026-03-04 06:40:25,731 | INFO     | . log creation = 0 s
[2026-03-04 07:41:27] 2026-03-04 06:40:25,731 | INFO     | ..............................
[2026-03-04 07:41:27] 2026-03-04 06:40:25,822 | INFO     | 
[2026-03-04 07:41:27] 2026-03-04 06:40:25,825 | INFO     | job summary report
[2026-03-04 07:41:27] 2026-03-04 06:40:25,825 | INFO     | --------------------------------------------------
[2026-03-04 07:41:27] 2026-03-04 06:40:25,825 | INFO     | PanDA job id: 7036003359
[2026-03-04 07:41:27] 2026-03-04 06:40:25,825 | INFO     | task id: 48847525
[2026-03-04 07:41:27] 2026-03-04 06:40:25,825 | INFO     | errors: (none)
[2026-03-04 07:41:27] 2026-03-04 06:40:25,825 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 07:41:27] 2026-03-04 06:40:25,825 | INFO     | pilot state: finished 
[2026-03-04 07:41:27] 2026-03-04 06:40:25,825 | INFO     | transexitcode: 0
[2026-03-04 07:41:27] 2026-03-04 06:40:25,825 | INFO     | exeerrorcode: 0
[2026-03-04 07:41:27] 2026-03-04 06:40:25,825 | INFO     | exeerrordiag: 
[2026-03-04 07:41:27] 2026-03-04 06:40:25,825 | INFO     | exitcode: 0
[2026-03-04 07:41:27] 2026-03-04 06:40:25,826 | INFO     | exitmsg: OK
[2026-03-04 07:41:27] 2026-03-04 06:40:25,826 | INFO     | cpuconsumptiontime: 66751 s
[2026-03-04 07:41:27] 2026-03-04 06:40:25,826 | INFO     | nevents: 400
[2026-03-04 07:41:27] 2026-03-04 06:40:25,826 | INFO     | neventsw: 0
[2026-03-04 07:41:27] 2026-03-04 06:40:25,826 | INFO     | pid: 953608
[2026-03-04 07:41:27] 2026-03-04 06:40:25,826 | INFO     | pgrp: 953608
[2026-03-04 07:41:27] 2026-03-04 06:40:25,826 | INFO     | corecount: 4
[2026-03-04 07:41:27] 2026-03-04 06:40:25,826 | INFO     | event service: False
[2026-03-04 07:41:27] 2026-03-04 06:40:25,826 | INFO     | sizes: {0: 2286036, 1: 2287165, 12: 2287165, 17298: 2319655, 17300: 2328731, 17301: 2328869}
[2026-03-04 07:41:27] 2026-03-04 06:40:25,826 | INFO     | --------------------------------------------------
[2026-03-04 07:41:27] 2026-03-04 06:40:25,826 | INFO     | 
[2026-03-04 07:41:27] 2026-03-04 06:40:25,826 | INFO     | executing command: ls -lF /scratch/boinc/var/slot96/slots/0
[2026-03-04 07:41:27] 2026-03-04 06:40:25,849 | INFO     | time since job start (17312s) is within the limit (349056.0s)
[2026-03-04 07:41:27] 2026-03-04 06:40:25,855 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,855 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,856 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,856 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,856 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,856 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,856 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,856 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,856 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,856 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,856 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,856 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,856 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,857 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,857 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,857 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,857 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,857 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 07:41:27] 2026-03-04 06:40:25,857 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,857 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 07:41:27] 2026-03-04 06:40:25,857 | INFO     | job 7036003359 has completed (purged errors)
[2026-03-04 07:41:27] 2026-03-04 06:40:25,857 | INFO     | overall cleanup function is called
[2026-03-04 07:41:27] 2026-03-04 06:40:26,866 | INFO     | --- collectZombieJob: --- 10, [953608]
[2026-03-04 07:41:27] 2026-03-04 06:40:26,867 | INFO     | zombie collector waiting for pid 953608
[2026-03-04 07:41:27] 2026-03-04 06:40:26,867 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 07:41:27] 2026-03-04 06:40:26,867 | INFO     | collected zombie processes
[2026-03-04 07:41:27] 2026-03-04 06:40:26,867 | INFO     | will attempt to kill all subprocesses of pid=953608
[2026-03-04 07:41:27] 2026-03-04 06:40:27,471 | INFO     | process IDs to be killed: [953608] (in reverse order)
[2026-03-04 07:41:27] 2026-03-04 06:40:27,719 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 07:41:27] 2026-03-04 06:40:27,720 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 07:41:27] 2026-03-04 06:40:27,741 | INFO     | did not find any defunct processes belonging to 953608
[2026-03-04 07:41:27] 2026-03-04 06:40:27,758 | INFO     | did not find any defunct processes belonging to 953608
[2026-03-04 07:41:27] 2026-03-04 06:40:27,758 | INFO     | ready for new job
[2026-03-04 07:41:27] 2026-03-04 06:40:27,758 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 07:41:27] 2026-03-04 06:40:27,761 | INFO     | **************************************
[2026-03-04 07:41:27] 2026-03-04 06:40:27,761 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 07:41:27] 2026-03-04 06:40:27,762 | INFO     | **************************************
[2026-03-04 07:41:27] 2026-03-04 06:40:27,762 | INFO     | 
[2026-03-04 07:41:27] 2026-03-04 06:40:27,769 | INFO     | architecture information:
[2026-03-04 07:41:27] 2026-03-04 06:40:27,769 | INFO     | executing command: cat /etc/os-release
[2026-03-04 07:41:27] 2026-03-04 06:40:27,791 | INFO     | cat /etc/os-release:
[2026-03-04 07:41:27] NAME="CentOS Linux"
[2026-03-04 07:41:27] VERSION="7 (Core)"
[2026-03-04 07:41:27] ID="centos"
[2026-03-04 07:41:27] ID_LIKE="rhel fedora"
[2026-03-04 07:41:27] VERSION_ID="7"
[2026-03-04 07:41:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 07:41:27] ANSI_COLOR="0;31"
[2026-03-04 07:41:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 07:41:27] HOME_URL="https://www.centos.org/"
[2026-03-04 07:41:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 07:41:27] 
[2026-03-04 07:41:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 07:41:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 07:41:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 07:41:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 07:41:27] 
[2026-03-04 07:41:27] 2026-03-04 06:40:27,791 | INFO     | **************************************
[2026-03-04 07:41:27] 2026-03-04 06:40:28,294 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/0
[2026-03-04 07:41:27] 2026-03-04 06:40:28,313 | INFO     | sufficient remaining disk space (3319319756800 B)
[2026-03-04 07:41:27] 2026-03-04 06:40:28,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 07:41:27] 2026-03-04 06:40:28,314 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 07:41:27] 2026-03-04 06:40:28,314 | INFO     | update_server=False
[2026-03-04 07:41:27] 2026-03-04 06:40:28,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 07:41:27] 2026-03-04 06:40:28,314 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 07:41:27] 2026-03-04 06:40:28,315 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 07:41:27] 2026-03-04 06:40:28,315 | INFO     | aborting loop
[2026-03-04 07:41:27] 2026-03-04 06:40:28,536 | INFO     | all job control threads have been joined
[2026-03-04 07:41:27] 2026-03-04 06:40:29,005 | INFO     | all payload control threads have been joined
[2026-03-04 07:41:27] 2026-03-04 06:40:29,172 | INFO     | all data control threads have been joined
[2026-03-04 07:41:27] 2026-03-04 06:40:29,318 | INFO     | [job] retrieve thread has finished
[2026-03-04 07:41:27] 2026-03-04 06:40:29,321 | INFO     | [job] job monitor thread has finished
[2026-03-04 07:41:27] 2026-03-04 06:40:29,326 | INFO     | [payload] failed_post thread has finished
[2026-03-04 07:41:27] 2026-03-04 06:40:29,541 | INFO     | [job] control thread has finished
[2026-03-04 07:41:27] 2026-03-04 06:40:29,569 | INFO     | [job] validate thread has finished
[2026-03-04 07:41:27] 2026-03-04 06:40:29,698 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 07:41:27] 2026-03-04 06:40:29,799 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 07:41:27] 2026-03-04 06:40:29,889 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 07:41:27] 2026-03-04 06:40:30,011 | INFO     | [payload] control thread has finished
[2026-03-04 07:41:27] 2026-03-04 06:40:30,177 | INFO     | [data] control thread has finished
[2026-03-04 07:41:27] 2026-03-04 06:40:30,320 | INFO     | [data] copytool_out thread has finished
[2026-03-04 07:41:27] 2026-03-04 06:40:30,413 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 07:41:27] 2026-03-04 06:40:30,493 | INFO     | [data] copytool_in thread has finished
[2026-03-04 07:41:27] 2026-03-04 06:40:30,832 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 07:41:27] 2026-03-04 06:40:30,909 | INFO     | [payload] validate_post thread has finished
[2026-03-04 07:41:27] 2026-03-04 06:40:31,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 07:41:27] 2026-03-04 06:40:31,838 | INFO     | [job] queue monitor thread has finished
[2026-03-04 07:41:27] 2026-03-04 06:40:35,025 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 07:41:27] 2026-03-04 06:40:59,639 | INFO     | PID=942158 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-04 07:41:27] 2026-03-04 06:40:59,639 | INFO     | .. there are 19 such processes running
[2026-03-04 07:41:27] 2026-03-04 06:40:59,639 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 07:41:27] 2026-03-04 06:40:59,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 07:41:27] 2026-03-04 06:40:59,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 07:41:27] 2026-03-04 06:41:20,514 | INFO     | [monitor] cgroup control has ended
[2026-03-04 07:41:27] 2026-03-04 06:41:21,669 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22671325161280)>', '<ExcThread(monitor, started 22671080556288)>']
[2026-03-04 07:41:27] 2026-03-04 06:41:21,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 07:41:27] 2026-03-04 06:41:21,744 | INFO     | [monitor] control thread has ended
[2026-03-04 07:41:27] 2026-03-04 06:41:26,694 | INFO     | all workflow threads have been joined
[2026-03-04 07:41:27] 2026-03-04 06:41:26,695 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 07:41:27] 2026-03-04 06:41:26,695 | INFO     | traces error code: 0
[2026-03-04 07:41:27] 2026-03-04 06:41:26,695 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 07:41:27] 2026-03-04 06:41:26,839 [wrapper] ==== pilot stdout END ====
[2026-03-04 07:41:27] 2026-03-04 06:41:26,843 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 07:41:27] 2026-03-04 06:41:26,847 [wrapper] pilotpid: 942158
[2026-03-04 07:41:27] 2026-03-04 06:41:26,852 [wrapper] Pilot exit status: 0
[2026-03-04 07:41:27] 2026-03-04 06:41:26,866 [wrapper] pandaids: 7036003359
[2026-03-04 07:41:27] 2026-03-04 06:41:27,019 [wrapper] cleanup supervisor_pilot 1456000 942159
[2026-03-04 07:41:27] 2026-03-04 06:41:27,023 [wrapper] Test setup, not cleaning
[2026-03-04 07:41:27] 2026-03-04 06:41:27,027 [wrapper] apfmon messages muted
[2026-03-04 07:41:27] 2026-03-04 06:41:27,031 [wrapper] ==== wrapper stdout END ====
[2026-03-04 07:41:27] 2026-03-04 06:41:27,035 [wrapper] ==== wrapper stderr END ====
[2026-03-04 07:41:27]  *** Error codes and diagnostics ***
[2026-03-04 07:41:27]     "exeErrorCode": 0,
[2026-03-04 07:41:27]     "exeErrorDiag": "",
[2026-03-04 07:41:27]     "pilotErrorCode": 0,
[2026-03-04 07:41:27]     "pilotErrorDiag": "",
[2026-03-04 07:41:27]  *** Listing of results directory ***
[2026-03-04 07:41:27] total 471440
[2026-03-04 07:41:27] -rwx------ 1 boinc boinc     36322 Mar  2 15:01 runpilot2-wrapper.sh
[2026-03-04 07:41:27] -rw-r--r-- 1 boinc boinc      5111 Mar  2 15:02 queuedata.json
[2026-03-04 07:41:27] -rw-r--r-- 1 boinc boinc    584627 Mar  2 15:02 pilot3.tar.gz
[2026-03-04 07:41:27] -rw-r--r-- 1 boinc boinc       100 Mar  4 02:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 07:41:27] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 02:51 run_atlas
[2026-03-04 07:41:27] -rw-r--r-- 1 boinc boinc       105 Mar  4 02:51 job.xml
[2026-03-04 07:41:27] -rw-r--r-- 2 boinc boinc 252606346 Mar  4 02:51 EVNT.48453847._000001.pool.root.1
[2026-03-04 07:41:27] -rw-r--r-- 1 boinc boinc      6699 Mar  4 02:51 init_data.xml
[2026-03-04 07:41:27] -rw-r--r-- 2 boinc boinc     15845 Mar  4 02:51 start_atlas.sh
[2026-03-04 07:41:27] drwxrwx--x 2 boinc boinc      4096 Mar  4 02:51 shared
[2026-03-04 07:41:27] -rw-r--r-- 2 boinc boinc    597953 Mar  4 02:51 input.tar.gz
[2026-03-04 07:41:27] -rw-r--r-- 1 boinc boinc         0 Mar  4 02:51 boinc_lockfile
[2026-03-04 07:41:27] -rw-r--r-- 1 boinc boinc      2602 Mar  4 02:51 pandaJob.out
[2026-03-04 07:41:27] -rw------- 1 boinc boinc    998484 Mar  4 02:51 agis_schedconf.cvmfs.json
[2026-03-04 07:41:27] -rw------- 1 boinc boinc       438 Mar  4 02:51 workernode_map.json
[2026-03-04 07:41:27] drwx------ 5 boinc boinc      4096 Mar  4 02:51 pilot3
[2026-03-04 07:41:27] -rw------- 1 boinc boinc 220518742 Mar  4 07:39 HITS.48847525._000015.pool.root.1
[2026-03-04 07:41:27] -rw-r--r-- 1 boinc boinc       530 Mar  4 07:40 boinc_task_state.xml
[2026-03-04 07:41:27] -rw------- 1 boinc boinc      1030 Mar  4 07:40 memory_monitor_summary.json
[2026-03-04 07:41:27] -rw------- 1 boinc boinc        95 Mar  4 07:40 pilot_heartbeat.json
[2026-03-04 07:41:27] -rw------- 1 boinc boinc   1516092 Mar  4 07:40 agis_ddmendpoints.agis.ALL.json
[2026-03-04 07:41:27] -rw------- 1 boinc boinc    447084 Mar  4 07:40 log.48847525._000015.job.log.tgz.1
[2026-03-04 07:41:27] -rw------- 1 boinc boinc      6338 Mar  4 07:40 heartbeat.json
[2026-03-04 07:41:27] -rw-r--r-- 1 boinc boinc        28 Mar  4 07:41 wrapper_checkpoint.txt
[2026-03-04 07:41:27] -rw-r--r-- 1 boinc boinc      8192 Mar  4 07:41 boinc_mmap_file
[2026-03-04 07:41:27] -rw------- 1 boinc boinc      4830 Mar  4 07:41 pilotlog.txt
[2026-03-04 07:41:27] -rw------- 1 boinc boinc   2397697 Mar  4 07:41 log.48847525._000015.job.log.1
[2026-03-04 07:41:27] -rw------- 1 boinc boinc       357 Mar  4 07:41 output.list
[2026-03-04 07:41:27] -rw-r--r-- 1 boinc boinc       620 Mar  4 07:41 runtime_log
[2026-03-04 07:41:27] -rw------- 1 boinc boinc   2867200 Mar  4 07:41 result.tar.gz
[2026-03-04 07:41:27] -rw-r--r-- 1 boinc boinc      9205 Mar  4 07:41 runtime_log.err
[2026-03-04 07:41:27] -rw------- 1 boinc boinc       665 Mar  4 07:41 0Z7KDmo0IH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmnaBLDm7iJHXo.diag
[2026-03-04 07:41:27] -rw-r--r-- 1 boinc boinc     20899 Mar  4 07:41 stderr.txt
[2026-03-04 07:41:27] HITS file was successfully produced:
[2026-03-04 07:41:27] -rw------- 1 boinc boinc 220518742 Mar  4 07:39 shared/HITS.pool.root.1
[2026-03-04 07:41:27]  *** Contents of shared directory: ***
[2026-03-04 07:41:27] total 465448
[2026-03-04 07:41:27] -rw-r--r-- 2 boinc boinc 252606346 Mar  4 02:51 ATLAS.root_0
[2026-03-04 07:41:27] -rw-r--r-- 2 boinc boinc     15845 Mar  4 02:51 start_atlas.sh
[2026-03-04 07:41:27] -rw-r--r-- 2 boinc boinc    597953 Mar  4 02:51 input.tar.gz
[2026-03-04 07:41:27] -rw------- 1 boinc boinc 220518742 Mar  4 07:39 HITS.pool.root.1
[2026-03-04 07:41:27] -rw------- 1 boinc boinc   2867200 Mar  4 07:41 result.tar.gz
07:41:28 (937759): run_atlas exited; CPU time 67741.097820
07:41:28 (937759): called boinc_finish(0)

</stderr_txt>
]]>

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