Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:46:32 (2851221): wrapper (7.7.26015): starting
12:46:32 (2851221): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 12:46:32] Arguments: --nthreads 4
[2026-03-03 12:46:32] Threads: 4
[2026-03-03 12:46:32] Checking for CVMFS
[2026-03-03 12:46:32] No cvmfs_config command found, will try listing directly
[2026-03-03 12:46:32] CVMFS is ok
[2026-03-03 12:46:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 12:46:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 12:46:32] Further information can be found at the LHC@home message board.
[2026-03-03 12:46:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 12:46:32] Checking for apptainer binary...
[2026-03-03 12:46:32] which: no apptainer in ((null))
[2026-03-03 12:46:32] apptainer is not installed, using version from CVMFS
[2026-03-03 12:46:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 12:46:32] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-03 12:46:32] apptainer works
[2026-03-03 12:46:32] Set ATHENA_PROC_NUMBER=4
[2026-03-03 12:46:32] Set ATHENA_CORE_NUMBER=4
[2026-03-03 12:46:32] Starting ATLAS job with PandaID=7036003424
[2026-03-03 12:46:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 14:40:58]  *** The last 200 lines of the pilot log: ***
[2026-03-03 14:40:58] 2026-03-03 13:40:06,129 | INFO     | job 7036003424 has finished - writing final server update
[2026-03-03 14:40:58] 2026-03-03 13:40:06,129 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_16238/.job.ad'
[2026-03-03 14:40:58] 2026-03-03 13:40:06,129 | INFO     | total number of processed events: 400 (read)
[2026-03-03 14:40:58] 2026-03-03 13:40:06,146 | INFO     | using path: /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7036003424/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 14:40:58] 2026-03-03 13:40:06,147 | INFO     | extracted standard info from prmon json
[2026-03-03 14:40:58] 2026-03-03 13:40:06,147 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 14:40:58] 2026-03-03 13:40:06,147 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 14:40:58] 2026-03-03 13:40:06,147 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 14:40:58] 2026-03-03 13:40:06,147 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 14:40:58] 2026-03-03 13:40:06,148 | INFO     | fitting pss+swap vs Time
[2026-03-03 14:40:58] 2026-03-03 13:40:06,149 | INFO     | sum of square deviations: 435610028.0
[2026-03-03 14:40:58] 2026-03-03 13:40:06,149 | INFO     | sum of deviations: 5365257348.5
[2026-03-03 14:40:58] 2026-03-03 13:40:06,149 | INFO     | mean x: 1772541807.5
[2026-03-03 14:40:58] 2026-03-03 13:40:06,149 | INFO     | mean y: 2307243.5089285714
[2026-03-03 14:40:58] 2026-03-03 13:40:06,149 | INFO     | intersect: -21829474274.18572
[2026-03-03 14:40:58] 2026-03-03 13:40:06,149 | INFO     | chi2: 1.932293334947849
[2026-03-03 14:40:58] 2026-03-03 13:40:06,149 | INFO     | sum of square deviations: 379832238.0
[2026-03-03 14:40:58] 2026-03-03 13:40:06,149 | INFO     | sum of deviations: 11892828461.0
[2026-03-03 14:40:58] 2026-03-03 13:40:06,150 | INFO     | mean x: 1772541655.0
[2026-03-03 14:40:58] 2026-03-03 13:40:06,150 | INFO     | mean y: 2324384.5140186916
[2026-03-03 14:40:58] 2026-03-03 13:40:06,150 | INFO     | intersect: -55497266576.72515
[2026-03-03 14:40:58] 2026-03-03 13:40:06,150 | INFO     | chi2: 1.1165985183460951
[2026-03-03 14:40:58] 2026-03-03 13:40:06,150 | INFO     | current chi2=1.1165985183460951 (change=42.213819291767564 %)
[2026-03-03 14:40:58] 2026-03-03 13:40:06,150 | INFO     | sum of square deviations: 329031285.5
[2026-03-03 14:40:58] 2026-03-03 13:40:06,150 | INFO     | sum of deviations: 11136703815.000004
[2026-03-03 14:40:58] 2026-03-03 13:40:06,150 | INFO     | mean x: 1772541502.5
[2026-03-03 14:40:58] 2026-03-03 13:40:06,150 | INFO     | mean y: 2322113.0392156863
[2026-03-03 14:40:58] 2026-03-03 13:40:06,150 | INFO     | intersect: -59992792585.978035
[2026-03-03 14:40:58] 2026-03-03 13:40:06,150 | INFO     | chi2: 1.118464322303097
[2026-03-03 14:40:58] 2026-03-03 13:40:06,150 | INFO     | current chi2=1.118464322303097 (change=-0.16709711918349068 %)
[2026-03-03 14:40:58] 2026-03-03 13:40:06,150 | INFO     | right removable region: 101
[2026-03-03 14:40:58] 2026-03-03 13:40:06,150 | INFO     | sum of square deviations: 379832238.0
[2026-03-03 14:40:58] 2026-03-03 13:40:06,151 | INFO     | sum of deviations: -5407391177.0
[2026-03-03 14:40:58] 2026-03-03 13:40:06,151 | INFO     | mean x: 1772541960.0
[2026-03-03 14:40:58] 2026-03-03 13:40:06,151 | INFO     | mean y: 2335846.168224299
[2026-03-03 14:40:58] 2026-03-03 13:40:06,151 | INFO     | intersect: 25236707225.05652
[2026-03-03 14:40:58] 2026-03-03 13:40:06,151 | INFO     | chi2: 0.8474096511044183
[2026-03-03 14:40:58] 2026-03-03 13:40:06,151 | INFO     | current chi2=0.8474096511044183 (change=56.144875326225296 %)
[2026-03-03 14:40:58] 2026-03-03 13:40:06,151 | INFO     | sum of square deviations: 329031285.5
[2026-03-03 14:40:58] 2026-03-03 13:40:06,151 | INFO     | sum of deviations: -5360380490.0
[2026-03-03 14:40:58] 2026-03-03 13:40:06,151 | INFO     | mean x: 1772542112.5
[2026-03-03 14:40:58] 2026-03-03 13:40:06,151 | INFO     | mean y: 2335692.901960784
[2026-03-03 14:40:58] 2026-03-03 13:40:06,151 | INFO     | intersect: 28879529371.034386
[2026-03-03 14:40:58] 2026-03-03 13:40:06,151 | INFO     | chi2: 0.8484832648340982
[2026-03-03 14:40:58] 2026-03-03 13:40:06,151 | INFO     | current chi2=0.8484832648340982 (change=-0.12669359244146183 %)
[2026-03-03 14:40:58] 2026-03-03 13:40:06,151 | INFO     | left removable region: 20
[2026-03-03 14:40:58] 2026-03-03 13:40:06,151 | INFO     | sum of square deviations: 164765880.0
[2026-03-03 14:40:58] 2026-03-03 13:40:06,152 | INFO     | sum of deviations: 756474908.0
[2026-03-03 14:40:58] 2026-03-03 13:40:06,152 | INFO     | mean x: 1772542082.0
[2026-03-03 14:40:58] 2026-03-03 13:40:06,152 | INFO     | mean y: 2355259.950617284
[2026-03-03 14:40:58] 2026-03-03 13:40:06,152 | INFO     | intersect: -8135759308.472642
[2026-03-03 14:40:58] 2026-03-03 13:40:06,152 | INFO     | chi2: 7.605955244242786e-05
[2026-03-03 14:40:58] 2026-03-03 13:40:06,152 | INFO     | current memory leak: 4.59 B/s (using 81 data points, chi2=0.00)
[2026-03-03 14:40:58] 2026-03-03 13:40:06,152 | INFO     | could have reported an average CPU frequency of 3628 MHz (7 samples)
[2026-03-03 14:40:58] 2026-03-03 13:40:06,152 | INFO     | ..............................
[2026-03-03 14:40:58] 2026-03-03 13:40:06,152 | INFO     | . Timing measurements:
[2026-03-03 14:40:58] 2026-03-03 13:40:06,152 | INFO     | . get job = 0 s
[2026-03-03 14:40:58] 2026-03-03 13:40:06,152 | INFO     | . initial setup = 4 s
[2026-03-03 14:40:58] 2026-03-03 13:40:06,152 | INFO     | . payload setup = 4 s
[2026-03-03 14:40:58] 2026-03-03 13:40:06,152 | INFO     | . stage-in = 0 s
[2026-03-03 14:40:58] 2026-03-03 13:40:06,152 | INFO     | . payload execution = 6778 s
[2026-03-03 14:40:58] 2026-03-03 13:40:06,152 | INFO     | . stage-out = 0 s
[2026-03-03 14:40:58] 2026-03-03 13:40:06,152 | INFO     | . log creation = 0 s
[2026-03-03 14:40:58] 2026-03-03 13:40:06,152 | INFO     | ..............................
[2026-03-03 14:40:58] 2026-03-03 13:40:06,607 | INFO     | 
[2026-03-03 14:40:58] 2026-03-03 13:40:06,607 | INFO     | job summary report
[2026-03-03 14:40:58] 2026-03-03 13:40:06,607 | INFO     | --------------------------------------------------
[2026-03-03 14:40:58] 2026-03-03 13:40:06,607 | INFO     | PanDA job id: 7036003424
[2026-03-03 14:40:58] 2026-03-03 13:40:06,607 | INFO     | task id: 48848723
[2026-03-03 14:40:58] 2026-03-03 13:40:06,607 | INFO     | errors: (none)
[2026-03-03 14:40:58] 2026-03-03 13:40:06,607 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 14:40:58] 2026-03-03 13:40:06,607 | INFO     | pilot state: finished 
[2026-03-03 14:40:58] 2026-03-03 13:40:06,608 | INFO     | transexitcode: 0
[2026-03-03 14:40:58] 2026-03-03 13:40:06,608 | INFO     | exeerrorcode: 0
[2026-03-03 14:40:58] 2026-03-03 13:40:06,608 | INFO     | exeerrordiag: 
[2026-03-03 14:40:58] 2026-03-03 13:40:06,608 | INFO     | exitcode: 0
[2026-03-03 14:40:58] 2026-03-03 13:40:06,608 | INFO     | exitmsg: OK
[2026-03-03 14:40:58] 2026-03-03 13:40:06,608 | INFO     | cpuconsumptiontime: 26261 s
[2026-03-03 14:40:58] 2026-03-03 13:40:06,608 | INFO     | nevents: 400
[2026-03-03 14:40:58] 2026-03-03 13:40:06,608 | INFO     | neventsw: 0
[2026-03-03 14:40:58] 2026-03-03 13:40:06,608 | INFO     | pid: 2861502
[2026-03-03 14:40:58] 2026-03-03 13:40:06,608 | INFO     | pgrp: 2861502
[2026-03-03 14:40:58] 2026-03-03 13:40:06,608 | INFO     | corecount: 4
[2026-03-03 14:40:58] 2026-03-03 13:40:06,608 | INFO     | event service: False
[2026-03-03 14:40:58] 2026-03-03 13:40:06,608 | INFO     | sizes: {0: 2287140, 11: 2287140, 6786: 2314363, 6788: 2323385, 6790: 2323441, 6792: 2323635}
[2026-03-03 14:40:58] 2026-03-03 13:40:06,608 | INFO     | --------------------------------------------------
[2026-03-03 14:40:58] 2026-03-03 13:40:06,608 | INFO     | 
[2026-03-03 14:40:58] 2026-03-03 13:40:06,608 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot120/slots/0
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,630 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 14:40:58] 2026-03-03 13:40:06,631 | INFO     | job 7036003424 has completed (purged errors)
[2026-03-03 14:40:58] 2026-03-03 13:40:06,631 | INFO     | overall cleanup function is called
[2026-03-03 14:40:58] 2026-03-03 13:40:07,638 | INFO     | --- collectZombieJob: --- 10, [2861502]
[2026-03-03 14:40:58] 2026-03-03 13:40:07,638 | INFO     | zombie collector waiting for pid 2861502
[2026-03-03 14:40:58] 2026-03-03 13:40:07,638 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 14:40:58] 2026-03-03 13:40:07,638 | INFO     | collected zombie processes
[2026-03-03 14:40:58] 2026-03-03 13:40:07,638 | INFO     | will attempt to kill all subprocesses of pid=2861502
[2026-03-03 14:40:58] 2026-03-03 13:40:07,993 | INFO     | process IDs to be killed: [2861502] (in reverse order)
[2026-03-03 14:40:58] 2026-03-03 13:40:08,156 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 14:40:58] 2026-03-03 13:40:08,156 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 14:40:58] 2026-03-03 13:40:08,176 | INFO     | did not find any defunct processes belonging to 2861502
[2026-03-03 14:40:58] 2026-03-03 13:40:08,192 | INFO     | did not find any defunct processes belonging to 2861502
[2026-03-03 14:40:58] 2026-03-03 13:40:08,193 | INFO     | ready for new job
[2026-03-03 14:40:58] 2026-03-03 13:40:08,193 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 14:40:58] 2026-03-03 13:40:08,194 | INFO     | **************************************
[2026-03-03 14:40:58] 2026-03-03 13:40:08,194 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 14:40:58] 2026-03-03 13:40:08,194 | INFO     | **************************************
[2026-03-03 14:40:58] 2026-03-03 13:40:08,194 | INFO     | 
[2026-03-03 14:40:58] 2026-03-03 13:40:08,200 | INFO     | architecture information:
[2026-03-03 14:40:58] 2026-03-03 13:40:08,200 | INFO     | executing command: cat /etc/os-release
[2026-03-03 14:40:58] 2026-03-03 13:40:08,218 | INFO     | cat /etc/os-release:
[2026-03-03 14:40:58] NAME="CentOS Linux"
[2026-03-03 14:40:58] VERSION="7 (Core)"
[2026-03-03 14:40:58] ID="centos"
[2026-03-03 14:40:58] ID_LIKE="rhel fedora"
[2026-03-03 14:40:58] VERSION_ID="7"
[2026-03-03 14:40:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 14:40:58] ANSI_COLOR="0;31"
[2026-03-03 14:40:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 14:40:58] HOME_URL="https://www.centos.org/"
[2026-03-03 14:40:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 14:40:58] 
[2026-03-03 14:40:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 14:40:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 14:40:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 14:40:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 14:40:58] 
[2026-03-03 14:40:58] 2026-03-03 13:40:08,218 | INFO     | **************************************
[2026-03-03 14:40:58] 2026-03-03 13:40:08,721 | INFO     | executing command: df -mP /var/lib/boinc/var/slot120/slots/0
[2026-03-03 14:40:58] 2026-03-03 13:40:08,734 | INFO     | sufficient remaining disk space (24354226176 B)
[2026-03-03 14:40:58] 2026-03-03 13:40:08,734 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 14:40:58] 2026-03-03 13:40:08,734 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 14:40:58] 2026-03-03 13:40:08,735 | INFO     | update_server=False
[2026-03-03 14:40:58] 2026-03-03 13:40:08,735 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 14:40:58] 2026-03-03 13:40:08,735 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 14:40:58] 2026-03-03 13:40:08,735 | INFO     | aborting loop
[2026-03-03 14:40:58] 2026-03-03 13:40:08,753 | INFO     | all payload control threads have been joined
[2026-03-03 14:40:58] 2026-03-03 13:40:09,242 | INFO     | all data control threads have been joined
[2026-03-03 14:40:58] 2026-03-03 13:40:09,740 | INFO     | [job] retrieve thread has finished
[2026-03-03 14:40:58] 2026-03-03 13:40:09,741 | INFO     | [job] job monitor thread has finished
[2026-03-03 14:40:58] 2026-03-03 13:40:09,759 | INFO     | [payload] control thread has finished
[2026-03-03 14:40:58] 2026-03-03 13:40:09,900 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 14:40:58] 2026-03-03 13:40:10,027 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 14:40:58] 2026-03-03 13:40:10,051 | INFO     | all job control threads have been joined
[2026-03-03 14:40:58] 2026-03-03 13:40:10,114 | INFO     | [payload] failed_post thread has finished
[2026-03-03 14:40:58] 2026-03-03 13:40:10,247 | INFO     | [data] control thread has finished
[2026-03-03 14:40:58] 2026-03-03 13:40:10,693 | INFO     | [job] validate thread has finished
[2026-03-03 14:40:58] 2026-03-03 13:40:10,718 | INFO     | [payload] validate_post thread has finished
[2026-03-03 14:40:58] 2026-03-03 13:40:10,729 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 14:40:58] 2026-03-03 13:40:10,756 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 14:40:58] 2026-03-03 13:40:11,010 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 14:40:58] 2026-03-03 13:40:11,056 | INFO     | [job] control thread has finished
[2026-03-03 14:40:58] 2026-03-03 13:40:11,192 | INFO     | [data] copytool_in thread has finished
[2026-03-03 14:40:58] 2026-03-03 13:40:11,210 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 14:40:58] 2026-03-03 13:40:11,902 | INFO     | [data] copytool_out thread has finished
[2026-03-03 14:40:58] 2026-03-03 13:40:12,216 | INFO     | [job] queue monitor thread has finished
[2026-03-03 14:40:58] 2026-03-03 13:40:14,732 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 14:40:58] 2026-03-03 13:40:18,828 | INFO     | job.realtimelogging is not enabled
[2026-03-03 14:40:58] 2026-03-03 13:40:19,833 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 14:40:58] 2026-03-03 13:40:38,856 | INFO     | PID=2855765 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 14:40:58] 2026-03-03 13:40:38,856 | INFO     | .. there are 47 such processes running
[2026-03-03 14:40:58] 2026-03-03 13:40:38,857 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 14:40:58] 2026-03-03 13:40:38,857 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 14:40:58] 2026-03-03 13:40:38,857 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 14:40:58] 2026-03-03 13:40:53,030 | INFO     | [monitor] cgroup control has ended
[2026-03-03 14:40:58] 2026-03-03 13:40:53,050 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23137071957824)>', '<ExcThread(monitor, started 23136832857856)>']
[2026-03-03 14:40:58] 2026-03-03 13:40:53,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 14:40:58] 2026-03-03 13:40:53,917 | INFO     | [monitor] control thread has ended
[2026-03-03 14:40:58] 2026-03-03 13:40:58,075 | INFO     | all workflow threads have been joined
[2026-03-03 14:40:58] 2026-03-03 13:40:58,076 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 14:40:58] 2026-03-03 13:40:58,076 | INFO     | traces error code: 0
[2026-03-03 14:40:58] 2026-03-03 13:40:58,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 14:40:58] 2026-03-03 13:40:58,186 [wrapper] ==== pilot stdout END ====
[2026-03-03 14:40:58] 2026-03-03 13:40:58,189 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 14:40:58] 2026-03-03 13:40:58,191 [wrapper] pilotpid: 2855765
[2026-03-03 14:40:58] 2026-03-03 13:40:58,193 [wrapper] Pilot exit status: 0
[2026-03-03 14:40:58] 2026-03-03 13:40:58,199 [wrapper] pandaids: 7036003424
[2026-03-03 14:40:58] 2026-03-03 13:40:58,294 [wrapper] cleanup supervisor_pilot 3778689 2855766
[2026-03-03 14:40:58] 2026-03-03 13:40:58,297 [wrapper] Test setup, not cleaning
[2026-03-03 14:40:58] 2026-03-03 13:40:58,300 [wrapper] apfmon messages muted
[2026-03-03 14:40:58] 2026-03-03 13:40:58,302 [wrapper] ==== wrapper stdout END ====
[2026-03-03 14:40:58] 2026-03-03 13:40:58,304 [wrapper] ==== wrapper stderr END ====
[2026-03-03 14:40:58]  *** Error codes and diagnostics ***
[2026-03-03 14:40:58]     "exeErrorCode": 0,
[2026-03-03 14:40:58]     "exeErrorDiag": "",
[2026-03-03 14:40:58]     "pilotErrorCode": 0,
[2026-03-03 14:40:58]     "pilotErrorDiag": "",
[2026-03-03 14:40:58]  *** Listing of results directory ***
[2026-03-03 14:40:58] total 526644
[2026-03-03 14:40:58] -rw-r--r--. 1 boinc boinc      5111 Mar  2 14:57 queuedata.json
[2026-03-03 14:40:58] -rw-r--r--. 1 boinc boinc    584627 Mar  2 14:57 pilot3.tar.gz
[2026-03-03 14:40:58] -rwx------. 1 boinc boinc     36322 Mar  2 14:58 runpilot2-wrapper.sh
[2026-03-03 14:40:58] -rw-r--r--. 1 boinc boinc       100 Mar  3 12:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 14:40:58] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 12:46 run_atlas
[2026-03-03 14:40:58] -rw-r--r--. 1 boinc boinc       105 Mar  3 12:46 job.xml
[2026-03-03 14:40:58] -rw-r--r--. 2 boinc boinc    597950 Mar  3 12:46 input.tar.gz
[2026-03-03 14:40:58] -rw-r--r--. 1 boinc boinc      6705 Mar  3 12:46 init_data.xml
[2026-03-03 14:40:58] -rw-r--r--. 2 boinc boinc 283621066 Mar  3 12:46 EVNT.48456052._000001.pool.root.1
[2026-03-03 14:40:58] -rw-r--r--. 2 boinc boinc     15845 Mar  3 12:46 start_atlas.sh
[2026-03-03 14:40:58] drwxrwx--x. 2 boinc boinc      4096 Mar  3 12:46 shared
[2026-03-03 14:40:58] -rw-r--r--. 1 boinc boinc         0 Mar  3 12:46 boinc_lockfile
[2026-03-03 14:40:58] -rw-r--r--. 1 boinc boinc      2606 Mar  3 12:46 pandaJob.out
[2026-03-03 14:40:58] -rw-------. 1 boinc boinc    998442 Mar  3 12:46 agis_schedconf.cvmfs.json
[2026-03-03 14:40:58] -rw-------. 1 boinc boinc   1516104 Mar  3 12:46 agis_ddmendpoints.agis.ALL.json
[2026-03-03 14:40:58] -rw-------. 1 boinc boinc       445 Mar  3 12:46 workernode_map.json
[2026-03-03 14:40:58] drwx------. 5 boinc boinc      4096 Mar  3 12:46 pilot3
[2026-03-03 14:40:58] -rw-------. 1 boinc boinc 249181568 Mar  3 14:39 HITS.48848723._000005.pool.root.1
[2026-03-03 14:40:58] -rw-r--r--. 1 boinc boinc       529 Mar  3 14:39 boinc_task_state.xml
[2026-03-03 14:40:58] -rw-------. 1 boinc boinc      1044 Mar  3 14:39 memory_monitor_summary.json
[2026-03-03 14:40:58] -rw-------. 1 boinc boinc    287650 Mar  3 14:40 log.48848723._000005.job.log.tgz.1
[2026-03-03 14:40:58] -rw-------. 1 boinc boinc      6342 Mar  3 14:40 heartbeat.json
[2026-03-03 14:40:58] -rw-------. 1 boinc boinc        95 Mar  3 14:40 pilot_heartbeat.json
[2026-03-03 14:40:58] -rw-r--r--. 1 boinc boinc      8192 Mar  3 14:40 boinc_mmap_file
[2026-03-03 14:40:58] -rw-r--r--. 1 boinc boinc        27 Mar  3 14:40 wrapper_checkpoint.txt
[2026-03-03 14:40:58] -rw-------. 1 boinc boinc      4902 Mar  3 14:40 pilotlog.txt
[2026-03-03 14:40:58] -rw-------. 1 boinc boinc    984154 Mar  3 14:40 log.48848723._000005.job.log.1
[2026-03-03 14:40:58] -rw-------. 1 boinc boinc       357 Mar  3 14:40 output.list
[2026-03-03 14:40:58] -rw-r--r--. 1 boinc boinc       620 Mar  3 14:40 runtime_log
[2026-03-03 14:40:58] -rw-------. 1 boinc boinc   1290240 Mar  3 14:40 result.tar.gz
[2026-03-03 14:40:58] -rw-r--r--. 1 boinc boinc      9221 Mar  3 14:40 runtime_log.err
[2026-03-03 14:40:58] -rw-------. 1 boinc boinc       661 Mar  3 14:40 JqlLDm9xIH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmVaDLDmS2ykcn.diag
[2026-03-03 14:40:58] -rw-r--r--. 1 boinc boinc     20860 Mar  3 14:40 stderr.txt
[2026-03-03 14:40:58] HITS file was successfully produced:
[2026-03-03 14:40:58] -rw-------. 1 boinc boinc 249181568 Mar  3 14:39 shared/HITS.pool.root.1
[2026-03-03 14:40:58]  *** Contents of shared directory: ***
[2026-03-03 14:40:58] total 522188
[2026-03-03 14:40:58] -rw-r--r--. 2 boinc boinc    597950 Mar  3 12:46 input.tar.gz
[2026-03-03 14:40:58] -rw-r--r--. 2 boinc boinc 283621066 Mar  3 12:46 ATLAS.root_0
[2026-03-03 14:40:58] -rw-r--r--. 2 boinc boinc     15845 Mar  3 12:46 start_atlas.sh
[2026-03-03 14:40:58] -rw-------. 1 boinc boinc 249181568 Mar  3 14:39 HITS.pool.root.1
[2026-03-03 14:40:58] -rw-------. 1 boinc boinc   1290240 Mar  3 14:40 result.tar.gz
14:40:59 (2851221): run_atlas exited; CPU time 26526.216516
14:40:59 (2851221): called boinc_finish(0)

</stderr_txt>
]]>

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