Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:25:34 (720951): wrapper (7.7.26015): starting
16:25:34 (720951): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 16:25:34] Arguments: --nthreads 4
[2026-03-04 16:25:34] Threads: 4
[2026-03-04 16:25:34] Checking for CVMFS
[2026-03-04 16:25:34] No cvmfs_config command found, will try listing directly
[2026-03-04 16:25:34] CVMFS is ok
[2026-03-04 16:25:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 16:25:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 16:25:34] Further information can be found at the LHC@home message board.
[2026-03-04 16:25:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 16:25:34] Checking for apptainer binary...
[2026-03-04 16:25:34] which: no apptainer in ((null))
[2026-03-04 16:25:34] apptainer is not installed, using version from CVMFS
[2026-03-04 16:25:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 16:25:34] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-04 16:25:34] apptainer works
[2026-03-04 16:25:34] Set ATHENA_PROC_NUMBER=4
[2026-03-04 16:25:34] Set ATHENA_CORE_NUMBER=4
[2026-03-04 16:25:34] Starting ATLAS job with PandaID=7036032778
[2026-03-04 16:25:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 19:09:22]  *** The last 200 lines of the pilot log: ***
[2026-03-04 19:09:22] 2026-03-04 18:08:26,136 | INFO     | mean y: 2316003.0875
[2026-03-04 19:09:22] 2026-03-04 18:08:26,136 | INFO     | intersect: -16928325748.947252
[2026-03-04 19:09:22] 2026-03-04 18:08:26,136 | INFO     | chi2: 1.9215890610654136
[2026-03-04 19:09:22] 2026-03-04 18:08:26,136 | INFO     | sum of square deviations: 1154663510.0
[2026-03-04 19:09:22] 2026-03-04 18:08:26,136 | INFO     | sum of deviations: 21676820371.0
[2026-03-04 19:09:22] 2026-03-04 18:08:26,137 | INFO     | mean x: 1772642690.0
[2026-03-04 19:09:22] 2026-03-04 18:08:26,137 | INFO     | mean y: 2328281.2193548386
[2026-03-04 19:09:22] 2026-03-04 18:08:26,137 | INFO     | intersect: -33275987730.59974
[2026-03-04 19:09:22] 2026-03-04 18:08:26,137 | INFO     | chi2: 1.1126227343941828
[2026-03-04 19:09:22] 2026-03-04 18:08:26,137 | INFO     | current chi2=1.1126227343941828 (change=42.098820349378144 %)
[2026-03-04 19:09:22] 2026-03-04 18:08:26,137 | INFO     | sum of square deviations: 1046484737.5
[2026-03-04 19:09:22] 2026-03-04 18:08:26,137 | INFO     | sum of deviations: 20933369756.000004
[2026-03-04 19:09:22] 2026-03-04 18:08:26,137 | INFO     | mean x: 1772642537.5
[2026-03-04 19:09:22] 2026-03-04 18:08:26,137 | INFO     | mean y: 2327232.88
[2026-03-04 19:09:22] 2026-03-04 18:08:26,137 | INFO     | intersect: -35456748616.949684
[2026-03-04 19:09:22] 2026-03-04 18:08:26,137 | INFO     | chi2: 1.112869993196081
[2026-03-04 19:09:22] 2026-03-04 18:08:26,138 | INFO     | current chi2=1.112869993196081 (change=-0.022223058567365474 %)
[2026-03-04 19:09:22] 2026-03-04 18:08:26,138 | INFO     | right removable region: 149
[2026-03-04 19:09:22] 2026-03-04 18:08:26,138 | INFO     | sum of square deviations: 1154663510.0
[2026-03-04 19:09:22] 2026-03-04 18:08:26,138 | INFO     | sum of deviations: -5183565158.000001
[2026-03-04 19:09:22] 2026-03-04 18:08:26,138 | INFO     | mean x: 1772642995.0
[2026-03-04 19:09:22] 2026-03-04 18:08:26,138 | INFO     | mean y: 2338495.7032258064
[2026-03-04 19:09:22] 2026-03-04 18:08:26,138 | INFO     | intersect: 7960163772.830734
[2026-03-04 19:09:22] 2026-03-04 18:08:26,138 | INFO     | chi2: 0.8307390143499018
[2026-03-04 19:09:22] 2026-03-04 18:08:26,138 | INFO     | current chi2=0.8307390143499018 (change=56.768123258918656 %)
[2026-03-04 19:09:22] 2026-03-04 18:08:26,138 | INFO     | sum of square deviations: 1046484737.5
[2026-03-04 19:09:22] 2026-03-04 18:08:26,139 | INFO     | sum of deviations: -5966527882.5
[2026-03-04 19:09:22] 2026-03-04 18:08:26,139 | INFO     | mean x: 1772643147.5
[2026-03-04 19:09:22] 2026-03-04 18:08:26,139 | INFO     | mean y: 2339594.5
[2026-03-04 19:09:22] 2026-03-04 18:08:26,139 | INFO     | intersect: 10109056287.328318
[2026-03-04 19:09:22] 2026-03-04 18:08:26,139 | INFO     | chi2: 0.8302516312784254
[2026-03-04 19:09:22] 2026-03-04 18:08:26,139 | INFO     | current chi2=0.8302516312784254 (change=0.05866861469818501 %)
[2026-03-04 19:09:22] 2026-03-04 18:08:26,139 | INFO     | left removable region: 20
[2026-03-04 19:09:22] 2026-03-04 18:08:26,139 | INFO     | sum of square deviations: 665612480.0
[2026-03-04 19:09:22] 2026-03-04 18:08:26,140 | INFO     | sum of deviations: 2241978140.0
[2026-03-04 19:09:22] 2026-03-04 18:08:26,140 | INFO     | mean x: 1772643117.0
[2026-03-04 19:09:22] 2026-03-04 18:08:26,140 | INFO     | mean y: 2355319.2248062016
[2026-03-04 19:09:22] 2026-03-04 18:08:26,140 | INFO     | intersect: -5968426836.685886
[2026-03-04 19:09:22] 2026-03-04 18:08:26,140 | INFO     | chi2: 0.0005817136299594426
[2026-03-04 19:09:22] 2026-03-04 18:08:26,140 | INFO     | current memory leak: 3.37 B/s (using 129 data points, chi2=0.00)
[2026-03-04 19:09:22] 2026-03-04 18:08:26,140 | INFO     | could have reported an average CPU frequency of 3577 MHz (9 samples)
[2026-03-04 19:09:22] 2026-03-04 18:08:26,140 | INFO     | ..............................
[2026-03-04 19:09:22] 2026-03-04 18:08:26,140 | INFO     | . Timing measurements:
[2026-03-04 19:09:22] 2026-03-04 18:08:26,140 | INFO     | . get job = 0 s
[2026-03-04 19:09:22] 2026-03-04 18:08:26,140 | INFO     | . initial setup = 10 s
[2026-03-04 19:09:22] 2026-03-04 18:08:26,140 | INFO     | . payload setup = 14 s
[2026-03-04 19:09:22] 2026-03-04 18:08:26,140 | INFO     | . stage-in = 0 s
[2026-03-04 19:09:22] 2026-03-04 18:08:26,140 | INFO     | . payload execution = 9715 s
[2026-03-04 19:09:22] 2026-03-04 18:08:26,140 | INFO     | . stage-out = 0 s
[2026-03-04 19:09:22] 2026-03-04 18:08:26,140 | INFO     | . log creation = 0 s
[2026-03-04 19:09:22] 2026-03-04 18:08:26,140 | INFO     | ..............................
[2026-03-04 19:09:22] 2026-03-04 18:08:26,257 | INFO     | 
[2026-03-04 19:09:22] 2026-03-04 18:08:26,257 | INFO     | job summary report
[2026-03-04 19:09:22] 2026-03-04 18:08:26,257 | INFO     | --------------------------------------------------
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | PanDA job id: 7036032778
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | task id: 48850907
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | errors: (none)
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | pilot state: finished 
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | transexitcode: 0
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | exeerrorcode: 0
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | exeerrordiag: 
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | exitcode: 0
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | exitmsg: OK
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | cpuconsumptiontime: 31444 s
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | nevents: 400
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | neventsw: 0
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | pid: 740547
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | pgrp: 740547
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | corecount: 4
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | event service: False
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | sizes: {0: 2287168, 11: 2287168, 9733: 2315963, 9734: 2324983, 9735: 2325039, 9737: 2325297}
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | --------------------------------------------------
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | 
[2026-03-04 19:09:22] 2026-03-04 18:08:26,268 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/2
[2026-03-04 19:09:22] 2026-03-04 18:08:26,405 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,405 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | job 7036032778 has completed (purged errors)
[2026-03-04 19:09:22] 2026-03-04 18:08:26,406 | INFO     | overall cleanup function is called
[2026-03-04 19:09:22] 2026-03-04 18:08:26,476 | WARNING  | process 740547 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 19:09:22] 2026-03-04 18:08:26,967 | INFO     | using path: /var/lib/boinc/var/slot60/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 19:09:22] 2026-03-04 18:08:26,968 | INFO     | using path: /var/lib/boinc/var/slot60/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 19:09:22] 2026-03-04 18:08:26,968 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-04 19:09:22] 2026-03-04 18:08:26,968 | WARNING  | maxPSS not found in memory monitor output
[2026-03-04 19:09:22] 2026-03-04 18:08:26,968 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot60/slots/2/PanDA_Pilot-7036032778/payload.stdout) since it has not been created yet
[2026-03-04 19:09:22] 2026-03-04 18:08:26,968 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/2
[2026-03-04 19:09:22] 2026-03-04 18:08:26,994 | INFO     | sufficient remaining disk space (20462960640 B)
[2026-03-04 19:09:22] 2026-03-04 18:08:26,994 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-04 19:09:22] 2026-03-04 18:08:26,995 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot60/slots/2/PanDA_Pilot-7036032778/HITS.48850907._000058.pool.root.1 since it does not exist
[2026-03-04 19:09:22] 2026-03-04 18:08:27,414 | INFO     | --- collectZombieJob: --- 10, [740547]
[2026-03-04 19:09:22] 2026-03-04 18:08:27,414 | INFO     | zombie collector waiting for pid 740547
[2026-03-04 19:09:22] 2026-03-04 18:08:27,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 19:09:22] 2026-03-04 18:08:27,414 | INFO     | collected zombie processes
[2026-03-04 19:09:22] 2026-03-04 18:08:27,414 | INFO     | will attempt to kill all subprocesses of pid=740547
[2026-03-04 19:09:22] 2026-03-04 18:08:27,864 | INFO     | number of running child processes to parent process 740547: 1
[2026-03-04 19:09:22] 2026-03-04 18:08:27,864 | INFO     | maximum number of monitored processes: 6
[2026-03-04 19:09:22] 2026-03-04 18:08:27,864 | INFO     | aborting job monitoring since job object (job id=7036032778) has expired
[2026-03-04 19:09:22] 2026-03-04 18:08:28,237 | INFO     | process IDs to be killed: [740547] (in reverse order)
[2026-03-04 19:09:22] 2026-03-04 18:08:30,122 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 19:09:22] 2026-03-04 18:08:30,125 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 19:09:22] 2026-03-04 18:08:30,153 | INFO     | did not find any defunct processes belonging to 740547
[2026-03-04 19:09:22] 2026-03-04 18:08:30,187 | INFO     | did not find any defunct processes belonging to 740547
[2026-03-04 19:09:22] 2026-03-04 18:08:30,187 | INFO     | ready for new job
[2026-03-04 19:09:22] 2026-03-04 18:08:30,187 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 19:09:22] 2026-03-04 18:08:30,188 | INFO     | **************************************
[2026-03-04 19:09:22] 2026-03-04 18:08:30,188 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 19:09:22] 2026-03-04 18:08:30,189 | INFO     | **************************************
[2026-03-04 19:09:22] 2026-03-04 18:08:30,189 | INFO     | 
[2026-03-04 19:09:22] 2026-03-04 18:08:30,194 | INFO     | architecture information:
[2026-03-04 19:09:22] 2026-03-04 18:08:30,198 | INFO     | executing command: cat /etc/os-release
[2026-03-04 19:09:22] 2026-03-04 18:08:30,260 | INFO     | cat /etc/os-release:
[2026-03-04 19:09:22] NAME="CentOS Linux"
[2026-03-04 19:09:22] VERSION="7 (Core)"
[2026-03-04 19:09:22] ID="centos"
[2026-03-04 19:09:22] ID_LIKE="rhel fedora"
[2026-03-04 19:09:22] VERSION_ID="7"
[2026-03-04 19:09:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 19:09:22] ANSI_COLOR="0;31"
[2026-03-04 19:09:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 19:09:22] HOME_URL="https://www.centos.org/"
[2026-03-04 19:09:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 19:09:22] 
[2026-03-04 19:09:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 19:09:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 19:09:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 19:09:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 19:09:22] 
[2026-03-04 19:09:22] 2026-03-04 18:08:30,260 | INFO     | **************************************
[2026-03-04 19:09:22] 2026-03-04 18:08:30,763 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/2
[2026-03-04 19:09:22] 2026-03-04 18:08:30,814 | INFO     | sufficient remaining disk space (20458766336 B)
[2026-03-04 19:09:22] 2026-03-04 18:08:30,814 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 19:09:22] 2026-03-04 18:08:30,815 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 19:09:22] 2026-03-04 18:08:30,815 | INFO     | update_server=False
[2026-03-04 19:09:22] 2026-03-04 18:08:30,815 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 19:09:22] 2026-03-04 18:08:30,816 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 19:09:22] 2026-03-04 18:08:30,976 | INFO     | all job control threads have been joined
[2026-03-04 19:09:22] 2026-03-04 18:08:31,228 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 19:09:22] 2026-03-04 18:08:31,375 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 19:09:22] 2026-03-04 18:08:31,375 | INFO     | aborting loop
[2026-03-04 19:09:22] 2026-03-04 18:08:31,406 | INFO     | all data control threads have been joined
[2026-03-04 19:09:22] 2026-03-04 18:08:31,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 19:09:22] 2026-03-04 18:08:31,820 | INFO     | [job] retrieve thread has finished
[2026-03-04 19:09:22] 2026-03-04 18:08:31,891 | INFO     | [payload] failed_post thread has finished
[2026-03-04 19:09:22] 2026-03-04 18:08:31,917 | INFO     | all payload control threads have been joined
[2026-03-04 19:09:22] 2026-03-04 18:08:31,982 | INFO     | [job] control thread has finished
[2026-03-04 19:09:22] 2026-03-04 18:08:32,234 | INFO     | [job] queue monitor thread has finished
[2026-03-04 19:09:22] 2026-03-04 18:08:32,303 | INFO     | [data] copytool_in thread has finished
[2026-03-04 19:09:22] 2026-03-04 18:08:32,310 | INFO     | [job] validate thread has finished
[2026-03-04 19:09:22] 2026-03-04 18:08:32,311 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 19:09:22] 2026-03-04 18:08:32,381 | INFO     | [job] job monitor thread has finished
[2026-03-04 19:09:22] 2026-03-04 18:08:32,385 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 19:09:22] 2026-03-04 18:08:32,412 | INFO     | [data] control thread has finished
[2026-03-04 19:09:22] 2026-03-04 18:08:32,922 | INFO     | [payload] control thread has finished
[2026-03-04 19:09:22] 2026-03-04 18:08:32,952 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 19:09:22] 2026-03-04 18:08:33,146 | INFO     | [payload] validate_post thread has finished
[2026-03-04 19:09:22] 2026-03-04 18:08:33,504 | INFO     | [data] copytool_out thread has finished
[2026-03-04 19:09:22] 2026-03-04 18:08:34,825 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 19:09:22] 2026-03-04 18:08:41,303 | INFO     | job.realtimelogging is not enabled
[2026-03-04 19:09:22] 2026-03-04 18:08:42,309 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 19:09:22] 2026-03-04 18:08:58,171 | INFO     | PID=727750 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-04 19:09:22] 2026-03-04 18:08:58,172 | INFO     | .. there are 56 such processes running
[2026-03-04 19:09:22] 2026-03-04 18:08:58,172 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 19:09:22] 2026-03-04 18:08:58,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 19:09:22] 2026-03-04 18:08:58,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 19:09:22] 2026-03-04 18:09:14,522 | INFO     | [monitor] cgroup control has ended
[2026-03-04 19:09:22] 2026-03-04 18:09:16,633 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22712321914688)>', '<ExcThread(monitor, started 22712077780736)>']
[2026-03-04 19:09:22] 2026-03-04 18:09:17,284 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 19:09:22] 2026-03-04 18:09:17,285 | INFO     | [monitor] control thread has ended
[2026-03-04 19:09:22] 2026-03-04 18:09:21,658 | INFO     | all workflow threads have been joined
[2026-03-04 19:09:22] 2026-03-04 18:09:21,658 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 19:09:22] 2026-03-04 18:09:21,658 | INFO     | traces error code: 0
[2026-03-04 19:09:22] 2026-03-04 18:09:21,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 19:09:22] 2026-03-04 18:09:21,786 [wrapper] ==== pilot stdout END ====
[2026-03-04 19:09:22] 2026-03-04 18:09:21,793 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 19:09:22] 2026-03-04 18:09:21,795 [wrapper] pilotpid: 727750
[2026-03-04 19:09:22] 2026-03-04 18:09:21,800 [wrapper] Pilot exit status: 0
[2026-03-04 19:09:22] 2026-03-04 18:09:21,872 [wrapper] pandaids: 7036032778
[2026-03-04 19:09:22] 2026-03-04 18:09:22,077 [wrapper] cleanup supervisor_pilot 2064653 727751
[2026-03-04 19:09:22] 2026-03-04 18:09:22,084 [wrapper] Test setup, not cleaning
[2026-03-04 19:09:22] 2026-03-04 18:09:22,089 [wrapper] apfmon messages muted
[2026-03-04 19:09:22] 2026-03-04 18:09:22,092 [wrapper] ==== wrapper stdout END ====
[2026-03-04 19:09:22] 2026-03-04 18:09:22,103 [wrapper] ==== wrapper stderr END ====
[2026-03-04 19:09:22]  *** Error codes and diagnostics ***
[2026-03-04 19:09:22]     "exeErrorCode": 0,
[2026-03-04 19:09:22]     "exeErrorDiag": "",
[2026-03-04 19:09:22]     "pilotErrorCode": 0,
[2026-03-04 19:09:22]     "pilotErrorDiag": "",
[2026-03-04 19:09:22]  *** Listing of results directory ***
[2026-03-04 19:09:22] total 442120
[2026-03-04 19:09:22] -rwx------. 1 boinc boinc     36322 Mar  2 16:04 runpilot2-wrapper.sh
[2026-03-04 19:09:22] -rw-r--r--. 1 boinc boinc      5111 Mar  2 16:04 queuedata.json
[2026-03-04 19:09:22] -rw-r--r--. 1 boinc boinc    584627 Mar  2 16:05 pilot3.tar.gz
[2026-03-04 19:09:22] -rw-r--r--. 1 boinc boinc       100 Mar  4 16:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 19:09:22] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 16:25 run_atlas
[2026-03-04 19:09:22] -rw-r--r--. 1 boinc boinc       105 Mar  4 16:25 job.xml
[2026-03-04 19:09:22] -rw-r--r--. 2 boinc boinc 240552788 Mar  4 16:25 EVNT.48459429._000003.pool.root.1
[2026-03-04 19:09:22] drwxrwx--x. 2 boinc boinc      4096 Mar  4 16:25 shared
[2026-03-04 19:09:22] -rw-r--r--. 2 boinc boinc    597975 Mar  4 16:25 input.tar.gz
[2026-03-04 19:09:22] -rw-r--r--. 2 boinc boinc     15845 Mar  4 16:25 start_atlas.sh
[2026-03-04 19:09:22] -rw-r--r--. 1 boinc boinc         0 Mar  4 16:25 boinc_lockfile
[2026-03-04 19:09:22] -rw-r--r--. 1 boinc boinc      2626 Mar  4 16:25 pandaJob.out
[2026-03-04 19:09:22] -rw-------. 1 boinc boinc    997352 Mar  4 16:25 agis_schedconf.cvmfs.json
[2026-03-04 19:09:22] -rw-------. 1 boinc boinc   1516092 Mar  4 16:25 agis_ddmendpoints.agis.ALL.json
[2026-03-04 19:09:22] -rw-------. 1 boinc boinc       443 Mar  4 16:25 workernode_map.json
[2026-03-04 19:09:22] drwx------. 5 boinc boinc      4096 Mar  4 16:25 pilot3
[2026-03-04 19:09:22] -rw-r--r--. 1 boinc boinc      6709 Mar  4 17:26 init_data.xml
[2026-03-04 19:09:22] -rw-------. 1 boinc boinc 204901157 Mar  4 19:07 HITS.48850907._000058.pool.root.1
[2026-03-04 19:09:22] -rw-r--r--. 1 boinc boinc       529 Mar  4 19:08 boinc_task_state.xml
[2026-03-04 19:09:22] -rw-------. 1 boinc boinc      1045 Mar  4 19:08 memory_monitor_summary.json
[2026-03-04 19:09:22] -rw-------. 1 boinc boinc    330069 Mar  4 19:08 log.48850907._000058.job.log.tgz.1
[2026-03-04 19:09:22] -rw-------. 1 boinc boinc      6348 Mar  4 19:08 heartbeat.json
[2026-03-04 19:09:22] -rw-------. 1 boinc boinc        95 Mar  4 19:08 pilot_heartbeat.json
[2026-03-04 19:09:22] -rw-r--r--. 1 boinc boinc      8192 Mar  4 19:09 boinc_mmap_file
[2026-03-04 19:09:22] -rw-r--r--. 1 boinc boinc        27 Mar  4 19:09 wrapper_checkpoint.txt
[2026-03-04 19:09:22] -rw-------. 1 boinc boinc      4900 Mar  4 19:09 pilotlog.txt
[2026-03-04 19:09:22] -rw-------. 1 boinc boinc   1339573 Mar  4 19:09 log.48850907._000058.job.log.1
[2026-03-04 19:09:22] -rw-------. 1 boinc boinc       357 Mar  4 19:09 output.list
[2026-03-04 19:09:22] -rw-r--r--. 1 boinc boinc       620 Mar  4 19:09 runtime_log
[2026-03-04 19:09:22] -rw-------. 1 boinc boinc   1689600 Mar  4 19:09 result.tar.gz
[2026-03-04 19:09:22] -rw-------. 1 boinc boinc       662 Mar  4 19:09 umCMDmG0JH9n9Rq4apOajLDm4fhM0noT9bVooX4SDm7tBLDmshIBKn.diag
[2026-03-04 19:09:22] -rw-r--r--. 1 boinc boinc      9204 Mar  4 19:09 runtime_log.err
[2026-03-04 19:09:22] -rw-r--r--. 1 boinc boinc     21229 Mar  4 19:09 stderr.txt
[2026-03-04 19:09:22] HITS file was successfully produced:
[2026-03-04 19:09:22] -rw-------. 1 boinc boinc 204901157 Mar  4 19:07 shared/HITS.pool.root.1
[2026-03-04 19:09:22]  *** Contents of shared directory: ***
[2026-03-04 19:09:22] total 437276
[2026-03-04 19:09:22] -rw-r--r--. 2 boinc boinc 240552788 Mar  4 16:25 ATLAS.root_0
[2026-03-04 19:09:22] -rw-r--r--. 2 boinc boinc    597975 Mar  4 16:25 input.tar.gz
[2026-03-04 19:09:22] -rw-r--r--. 2 boinc boinc     15845 Mar  4 16:25 start_atlas.sh
[2026-03-04 19:09:22] -rw-------. 1 boinc boinc 204901157 Mar  4 19:07 HITS.pool.root.1
[2026-03-04 19:09:22] -rw-------. 1 boinc boinc   1689600 Mar  4 19:09 result.tar.gz
19:09:23 (720951): run_atlas exited; CPU time 31868.258927
19:09:23 (720951): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN