Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:42:19 (1667293): wrapper (7.7.26015): starting
17:42:19 (1667293): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 17:42:19] Arguments: --nthreads 4
[2026-03-03 17:42:19] Threads: 4
[2026-03-03 17:42:19] Checking for CVMFS
[2026-03-03 17:42:19] No cvmfs_config command found, will try listing directly
[2026-03-03 17:42:19] CVMFS is ok
[2026-03-03 17:42:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 17:42:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 17:42:19] Further information can be found at the LHC@home message board.
[2026-03-03 17:42:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 17:42:19] Checking for apptainer binary...
[2026-03-03 17:42:19] which: no apptainer in ((null))
[2026-03-03 17:42:19] apptainer is not installed, using version from CVMFS
[2026-03-03 17:42:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 17:42:19] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-03-03 17:42:19] apptainer works
[2026-03-03 17:42:19] Set ATHENA_PROC_NUMBER=4
[2026-03-03 17:42:19] Set ATHENA_CORE_NUMBER=4
[2026-03-03 17:42:19] Starting ATLAS job with PandaID=7035985762
[2026-03-03 17:42:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 20:18:57]  *** The last 200 lines of the pilot log: ***
[2026-03-03 20:18:57] 2026-03-03 19:18:16,111 | INFO     | time since job start (9341s) is within the limit (349056.0s)
[2026-03-03 20:18:57] 2026-03-03 19:18:17,215 | INFO     | job 7035985762 has state=finished
[2026-03-03 20:18:57] 2026-03-03 19:18:17,215 | INFO     | preparing for final server update for job 7035985762 in state='finished'
[2026-03-03 20:18:57] 2026-03-03 19:18:17,216 | INFO     | reading metadata from: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-7035985762/jobReport.json
[2026-03-03 20:18:57] 2026-03-03 19:18:17,218 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot32/slots/0/workernode_map.json
[2026-03-03 20:18:57] 2026-03-03 19:18:17,218 | INFO     | this job has now completed (state=finished)
[2026-03-03 20:18:57] 2026-03-03 19:18:17,219 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 20:18:57] 2026-03-03 19:18:17,219 | INFO     | log transfer has been attempted: DONE
[2026-03-03 20:18:57] 2026-03-03 19:18:17,219 | INFO     | job 7035985762 has finished - writing final server update
[2026-03-03 20:18:57] 2026-03-03 19:18:17,219 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2088658/.job.ad'
[2026-03-03 20:18:57] 2026-03-03 19:18:17,219 | INFO     | total number of processed events: 400 (read)
[2026-03-03 20:18:57] 2026-03-03 19:18:17,231 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-7035985762/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 20:18:57] 2026-03-03 19:18:17,232 | INFO     | extracted standard info from prmon json
[2026-03-03 20:18:57] 2026-03-03 19:18:17,232 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 20:18:57] 2026-03-03 19:18:17,232 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 20:18:57] 2026-03-03 19:18:17,232 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 20:18:57] 2026-03-03 19:18:17,232 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 20:18:57] 2026-03-03 19:18:17,235 | INFO     | fitting pss+swap vs Time
[2026-03-03 20:18:57] 2026-03-03 19:18:17,235 | INFO     | sum of square deviations: 1110539892.0
[2026-03-03 20:18:57] 2026-03-03 19:18:17,236 | INFO     | sum of deviations: 14987105372.0
[2026-03-03 20:18:57] 2026-03-03 19:18:17,236 | INFO     | mean x: 1772560814.0
[2026-03-03 20:18:57] 2026-03-03 19:18:17,236 | INFO     | mean y: 2295906.3071895423
[2026-03-03 20:18:57] 2026-03-03 19:18:17,237 | INFO     | intersect: -23919002093.941586
[2026-03-03 20:18:57] 2026-03-03 19:18:17,237 | INFO     | chi2: 1.380649523394869
[2026-03-03 20:18:57] 2026-03-03 19:18:17,237 | INFO     | sum of square deviations: 1005179777.0
[2026-03-03 20:18:57] 2026-03-03 19:18:17,238 | INFO     | sum of deviations: 14497560669.000002
[2026-03-03 20:18:57] 2026-03-03 19:18:17,238 | INFO     | mean x: 1772560661.5
[2026-03-03 20:18:57] 2026-03-03 19:18:17,238 | INFO     | mean y: 2295195.9864864866
[2026-03-03 20:18:57] 2026-03-03 19:18:17,238 | INFO     | intersect: -25563087552.038124
[2026-03-03 20:18:57] 2026-03-03 19:18:17,239 | INFO     | chi2: 1.382110402288083
[2026-03-03 20:18:57] 2026-03-03 19:18:17,239 | INFO     | current chi2=1.382110402288083 (change=-0.10581098739829765 %)
[2026-03-03 20:18:57] 2026-03-03 19:18:17,239 | INFO     | right removable region: 147
[2026-03-03 20:18:57] 2026-03-03 19:18:17,239 | INFO     | sum of square deviations: 1005179777.0
[2026-03-03 20:18:57] 2026-03-03 19:18:17,240 | INFO     | sum of deviations: -4879869612.5
[2026-03-03 20:18:57] 2026-03-03 19:18:17,240 | INFO     | mean x: 1772560966.5
[2026-03-03 20:18:57] 2026-03-03 19:18:17,240 | INFO     | mean y: 2324185.0337837837
[2026-03-03 20:18:57] 2026-03-03 19:18:17,240 | INFO     | intersect: 8607617083.526886
[2026-03-03 20:18:57] 2026-03-03 19:18:17,240 | INFO     | chi2: 0.01033757254585086
[2026-03-03 20:18:57] 2026-03-03 19:18:17,240 | INFO     | current chi2=0.01033757254585086 (change=99.25125295227483 %)
[2026-03-03 20:18:57] 2026-03-03 19:18:17,241 | INFO     | sum of square deviations: 906703512.0
[2026-03-03 20:18:57] 2026-03-03 19:18:17,241 | INFO     | sum of deviations: -4315769825.0
[2026-03-03 20:18:57] 2026-03-03 19:18:17,242 | INFO     | mean x: 1772561119.0
[2026-03-03 20:18:57] 2026-03-03 19:18:17,242 | INFO     | mean y: 2323306.160839161
[2026-03-03 20:18:57] 2026-03-03 19:18:17,242 | INFO     | intersect: 8439442705.284149
[2026-03-03 20:18:57] 2026-03-03 19:18:17,242 | INFO     | chi2: 0.01026393903365239
[2026-03-03 20:18:57] 2026-03-03 19:18:17,242 | INFO     | current chi2=0.01026393903365239 (change=0.7122901616591323 %)
[2026-03-03 20:18:57] 2026-03-03 19:18:17,242 | INFO     | left removable region: 20
[2026-03-03 20:18:57] 2026-03-03 19:18:17,243 | INFO     | sum of square deviations: 635130048.0
[2026-03-03 20:18:57] 2026-03-03 19:18:17,243 | INFO     | sum of deviations: -2290684871.0
[2026-03-03 20:18:57] 2026-03-03 19:18:17,243 | INFO     | mean x: 1772561241.0
[2026-03-03 20:18:57] 2026-03-03 19:18:17,244 | INFO     | mean y: 2320023.062992126
[2026-03-03 20:18:57] 2026-03-03 19:18:17,244 | INFO     | intersect: 6395308719.575875
[2026-03-03 20:18:57] 2026-03-03 19:18:17,244 | INFO     | chi2: 0.008467408742473799
[2026-03-03 20:18:57] 2026-03-03 19:18:17,244 | INFO     | current memory leak: -3.61 B/s (using 127 data points, chi2=0.01)
[2026-03-03 20:18:57] 2026-03-03 19:18:17,244 | INFO     | could have reported an average CPU frequency of 2539 MHz (9 samples)
[2026-03-03 20:18:57] 2026-03-03 19:18:17,245 | INFO     | ..............................
[2026-03-03 20:18:57] 2026-03-03 19:18:17,245 | INFO     | . Timing measurements:
[2026-03-03 20:18:57] 2026-03-03 19:18:17,245 | INFO     | . get job = 0 s
[2026-03-03 20:18:57] 2026-03-03 19:18:17,245 | INFO     | . initial setup = 5 s
[2026-03-03 20:18:57] 2026-03-03 19:18:17,245 | INFO     | . payload setup = 6 s
[2026-03-03 20:18:57] 2026-03-03 19:18:17,245 | INFO     | . stage-in = 0 s
[2026-03-03 20:18:57] 2026-03-03 19:18:17,245 | INFO     | . payload execution = 9312 s
[2026-03-03 20:18:57] 2026-03-03 19:18:17,245 | INFO     | . stage-out = 0 s
[2026-03-03 20:18:57] 2026-03-03 19:18:17,245 | INFO     | . log creation = 0 s
[2026-03-03 20:18:57] 2026-03-03 19:18:17,245 | INFO     | ..............................
[2026-03-03 20:18:57] 2026-03-03 19:18:17,796 | INFO     | 
[2026-03-03 20:18:57] 2026-03-03 19:18:17,796 | INFO     | job summary report
[2026-03-03 20:18:57] 2026-03-03 19:18:17,796 | INFO     | --------------------------------------------------
[2026-03-03 20:18:57] 2026-03-03 19:18:17,796 | INFO     | PanDA job id: 7035985762
[2026-03-03 20:18:57] 2026-03-03 19:18:17,797 | INFO     | task id: 48700858
[2026-03-03 20:18:57] 2026-03-03 19:18:17,797 | INFO     | errors: (none)
[2026-03-03 20:18:57] 2026-03-03 19:18:17,797 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 20:18:57] 2026-03-03 19:18:17,797 | INFO     | pilot state: finished 
[2026-03-03 20:18:57] 2026-03-03 19:18:17,797 | INFO     | transexitcode: 0
[2026-03-03 20:18:57] 2026-03-03 19:18:17,797 | INFO     | exeerrorcode: 0
[2026-03-03 20:18:57] 2026-03-03 19:18:17,797 | INFO     | exeerrordiag: 
[2026-03-03 20:18:57] 2026-03-03 19:18:17,797 | INFO     | exitcode: 0
[2026-03-03 20:18:57] 2026-03-03 19:18:17,797 | INFO     | exitmsg: OK
[2026-03-03 20:18:57] 2026-03-03 19:18:17,797 | INFO     | cpuconsumptiontime: 35539 s
[2026-03-03 20:18:57] 2026-03-03 19:18:17,797 | INFO     | nevents: 400
[2026-03-03 20:18:57] 2026-03-03 19:18:17,797 | INFO     | neventsw: 0
[2026-03-03 20:18:57] 2026-03-03 19:18:17,797 | INFO     | pid: 1675961
[2026-03-03 20:18:57] 2026-03-03 19:18:17,798 | INFO     | pgrp: 1675961
[2026-03-03 20:18:57] 2026-03-03 19:18:17,798 | INFO     | corecount: 4
[2026-03-03 20:18:57] 2026-03-03 19:18:17,798 | INFO     | event service: False
[2026-03-03 20:18:57] 2026-03-03 19:18:17,798 | INFO     | sizes: {0: 2286915, 11: 2286915, 9322: 2315288, 9324: 2324308, 9327: 2324364, 9330: 2324622}
[2026-03-03 20:18:57] 2026-03-03 19:18:17,798 | INFO     | --------------------------------------------------
[2026-03-03 20:18:57] 2026-03-03 19:18:17,798 | INFO     | 
[2026-03-03 20:18:57] 2026-03-03 19:18:17,798 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2026-03-03 20:18:57] 2026-03-03 19:18:17,820 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,821 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,821 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,821 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,821 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,822 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,822 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,822 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,822 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,822 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,822 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,822 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 20:18:57] 2026-03-03 19:18:17,822 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,822 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 20:18:57] 2026-03-03 19:18:17,823 | INFO     | job 7035985762 has completed (purged errors)
[2026-03-03 20:18:57] 2026-03-03 19:18:17,823 | INFO     | overall cleanup function is called
[2026-03-03 20:18:57] 2026-03-03 19:18:18,830 | INFO     | --- collectZombieJob: --- 10, [1675961]
[2026-03-03 20:18:57] 2026-03-03 19:18:18,830 | INFO     | zombie collector waiting for pid 1675961
[2026-03-03 20:18:57] 2026-03-03 19:18:18,830 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 20:18:57] 2026-03-03 19:18:18,831 | INFO     | collected zombie processes
[2026-03-03 20:18:57] 2026-03-03 19:18:18,831 | INFO     | will attempt to kill all subprocesses of pid=1675961
[2026-03-03 20:18:57] 2026-03-03 19:18:19,190 | INFO     | process IDs to be killed: [1675961] (in reverse order)
[2026-03-03 20:18:57] 2026-03-03 19:18:19,315 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 20:18:57] 2026-03-03 19:18:19,316 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 20:18:57] 2026-03-03 19:18:19,327 | INFO     | did not find any defunct processes belonging to 1675961
[2026-03-03 20:18:57] 2026-03-03 19:18:19,338 | INFO     | did not find any defunct processes belonging to 1675961
[2026-03-03 20:18:57] 2026-03-03 19:18:19,338 | INFO     | ready for new job
[2026-03-03 20:18:57] 2026-03-03 19:18:19,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 20:18:57] 2026-03-03 19:18:19,340 | INFO     | **************************************
[2026-03-03 20:18:57] 2026-03-03 19:18:19,340 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 20:18:57] 2026-03-03 19:18:19,341 | INFO     | **************************************
[2026-03-03 20:18:57] 2026-03-03 19:18:19,341 | INFO     | 
[2026-03-03 20:18:57] 2026-03-03 19:18:19,345 | INFO     | architecture information:
[2026-03-03 20:18:57] 2026-03-03 19:18:19,345 | INFO     | executing command: cat /etc/os-release
[2026-03-03 20:18:57] 2026-03-03 19:18:19,360 | INFO     | cat /etc/os-release:
[2026-03-03 20:18:57] NAME="CentOS Linux"
[2026-03-03 20:18:57] VERSION="7 (Core)"
[2026-03-03 20:18:57] ID="centos"
[2026-03-03 20:18:57] ID_LIKE="rhel fedora"
[2026-03-03 20:18:57] VERSION_ID="7"
[2026-03-03 20:18:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 20:18:57] ANSI_COLOR="0;31"
[2026-03-03 20:18:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 20:18:57] HOME_URL="https://www.centos.org/"
[2026-03-03 20:18:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 20:18:57] 
[2026-03-03 20:18:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 20:18:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 20:18:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 20:18:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 20:18:57] 
[2026-03-03 20:18:57] 2026-03-03 19:18:19,360 | INFO     | **************************************
[2026-03-03 20:18:57] 2026-03-03 19:18:19,863 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2026-03-03 20:18:57] 2026-03-03 19:18:19,882 | INFO     | sufficient remaining disk space (670301159424 B)
[2026-03-03 20:18:57] 2026-03-03 19:18:19,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 20:18:57] 2026-03-03 19:18:19,883 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 20:18:57] 2026-03-03 19:18:19,883 | INFO     | update_server=False
[2026-03-03 20:18:57] 2026-03-03 19:18:19,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 20:18:57] 2026-03-03 19:18:19,883 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 20:18:57] 2026-03-03 19:18:19,883 | INFO     | aborting loop
[2026-03-03 20:18:57] 2026-03-03 19:18:20,314 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 20:18:57] 2026-03-03 19:18:20,760 | INFO     | all data control threads have been joined
[2026-03-03 20:18:57] 2026-03-03 19:18:20,888 | INFO     | [job] retrieve thread has finished
[2026-03-03 20:18:57] 2026-03-03 19:18:20,889 | INFO     | [job] job monitor thread has finished
[2026-03-03 20:18:57] 2026-03-03 19:18:20,890 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 20:18:57] 2026-03-03 19:18:20,975 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 20:18:57] 2026-03-03 19:18:21,094 | INFO     | all payload control threads have been joined
[2026-03-03 20:18:57] 2026-03-03 19:18:21,258 | INFO     | all job control threads have been joined
[2026-03-03 20:18:57] 2026-03-03 19:18:21,290 | INFO     | [data] copytool_in thread has finished
[2026-03-03 20:18:57] 2026-03-03 19:18:21,340 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 20:18:57] 2026-03-03 19:18:21,357 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 20:18:57] 2026-03-03 19:18:21,692 | INFO     | [payload] failed_post thread has finished
[2026-03-03 20:18:57] 2026-03-03 19:18:21,692 | INFO     | [payload] validate_post thread has finished
[2026-03-03 20:18:57] 2026-03-03 19:18:21,765 | INFO     | [data] control thread has finished
[2026-03-03 20:18:57] 2026-03-03 19:18:21,842 | INFO     | [job] validate thread has finished
[2026-03-03 20:18:57] 2026-03-03 19:18:22,100 | INFO     | [payload] control thread has finished
[2026-03-03 20:18:57] 2026-03-03 19:18:22,263 | INFO     | [job] control thread has finished
[2026-03-03 20:18:57] 2026-03-03 19:18:22,290 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 20:18:57] 2026-03-03 19:18:22,347 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 20:18:57] 2026-03-03 19:18:23,351 | INFO     | [job] queue monitor thread has finished
[2026-03-03 20:18:57] 2026-03-03 19:18:23,362 | INFO     | [data] copytool_out thread has finished
[2026-03-03 20:18:57] 2026-03-03 19:18:24,320 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 20:18:57] 2026-03-03 19:18:49,604 | INFO     | PID=1671218 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 20:18:57] 2026-03-03 19:18:49,605 | INFO     | .. there are 12 such processes running
[2026-03-03 20:18:57] 2026-03-03 19:18:49,605 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 20:18:57] 2026-03-03 19:18:49,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 20:18:57] 2026-03-03 19:18:49,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 20:18:57] 2026-03-03 19:18:50,726 | INFO     | [monitor] cgroup control has ended
[2026-03-03 20:18:57] 2026-03-03 19:18:51,701 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22540986144576)>', '<ExcThread(monitor, started 22540750964480)>']
[2026-03-03 20:18:57] 2026-03-03 19:18:52,620 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 20:18:57] 2026-03-03 19:18:52,620 | INFO     | [monitor] control thread has ended
[2026-03-03 20:18:57] 2026-03-03 19:18:56,726 | INFO     | all workflow threads have been joined
[2026-03-03 20:18:57] 2026-03-03 19:18:56,726 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 20:18:57] 2026-03-03 19:18:56,726 | INFO     | traces error code: 0
[2026-03-03 20:18:57] 2026-03-03 19:18:56,727 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 20:18:57] 2026-03-03 19:18:56,908 [wrapper] ==== pilot stdout END ====
[2026-03-03 20:18:57] 2026-03-03 19:18:56,911 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 20:18:57] 2026-03-03 19:18:56,914 [wrapper] pilotpid: 1671218
[2026-03-03 20:18:57] 2026-03-03 19:18:56,916 [wrapper] Pilot exit status: 0
[2026-03-03 20:18:57] 2026-03-03 19:18:56,928 [wrapper] pandaids: 7035985762
[2026-03-03 20:18:57] 2026-03-03 19:18:57,002 [wrapper] cleanup supervisor_pilot 1751066 1671219
[2026-03-03 20:18:57] 2026-03-03 19:18:57,006 [wrapper] Test setup, not cleaning
[2026-03-03 20:18:57] 2026-03-03 19:18:57,009 [wrapper] apfmon messages muted
[2026-03-03 20:18:57] 2026-03-03 19:18:57,011 [wrapper] ==== wrapper stdout END ====
[2026-03-03 20:18:57] 2026-03-03 19:18:57,014 [wrapper] ==== wrapper stderr END ====
[2026-03-03 20:18:57]  *** Error codes and diagnostics ***
[2026-03-03 20:18:57]     "exeErrorCode": 0,
[2026-03-03 20:18:57]     "exeErrorDiag": "",
[2026-03-03 20:18:57]     "pilotErrorCode": 0,
[2026-03-03 20:18:57]     "pilotErrorDiag": "",
[2026-03-03 20:18:57]  *** Listing of results directory ***
[2026-03-03 20:18:57] total 332272
[2026-03-03 20:18:57] -rw-r--r-- 1 boinc boinc      5111 Mar  2 13:41 queuedata.json
[2026-03-03 20:18:57] -rw-r--r-- 1 boinc boinc    584627 Mar  2 13:41 pilot3.tar.gz
[2026-03-03 20:18:57] -rwx------ 1 boinc boinc     36322 Mar  2 13:42 runpilot2-wrapper.sh
[2026-03-03 20:18:57] -rw-r--r-- 1 boinc boinc       100 Mar  3 17:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 20:18:57] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 17:42 run_atlas
[2026-03-03 20:18:57] -rw-r--r-- 1 boinc boinc       105 Mar  3 17:42 job.xml
[2026-03-03 20:18:57] -rw-r--r-- 1 boinc boinc      6640 Mar  3 17:42 init_data.xml
[2026-03-03 20:18:57] -rw-r--r-- 2 boinc boinc 188799336 Mar  3 17:42 EVNT.48700856._000006.pool.root.1
[2026-03-03 20:18:57] -rw-r--r-- 2 boinc boinc     15845 Mar  3 17:42 start_atlas.sh
[2026-03-03 20:18:57] drwxrwx--x 2 boinc boinc      4096 Mar  3 17:42 shared
[2026-03-03 20:18:57] -rw-r--r-- 2 boinc boinc    597937 Mar  3 17:42 input.tar.gz
[2026-03-03 20:18:57] -rw-r--r-- 1 boinc boinc         0 Mar  3 17:42 boinc_lockfile
[2026-03-03 20:18:57] -rw-r--r-- 1 boinc boinc      2515 Mar  3 17:42 pandaJob.out
[2026-03-03 20:18:57] -rw------- 1 boinc boinc    998516 Mar  3 17:42 agis_schedconf.cvmfs.json
[2026-03-03 20:18:57] -rw------- 1 boinc boinc   1516092 Mar  3 17:42 agis_ddmendpoints.agis.ALL.json
[2026-03-03 20:18:57] -rw------- 1 boinc boinc       452 Mar  3 17:42 workernode_map.json
[2026-03-03 20:18:57] drwx------ 5 boinc boinc      4096 Mar  3 17:42 pilot3
[2026-03-03 20:18:57] -rw-r--r-- 1 boinc boinc       529 Mar  3 20:17 boinc_task_state.xml
[2026-03-03 20:18:57] -rw------- 1 boinc boinc 144169138 Mar  3 20:17 HITS.48700858._001798.pool.root.1
[2026-03-03 20:18:57] -rw------- 1 boinc boinc      1032 Mar  3 20:18 memory_monitor_summary.json
[2026-03-03 20:18:57] -rw------- 1 boinc boinc        95 Mar  3 20:18 pilot_heartbeat.json
[2026-03-03 20:18:57] -rw------- 1 boinc boinc    343600 Mar  3 20:18 log.48700858._001798.job.log.tgz.1
[2026-03-03 20:18:57] -rw------- 1 boinc boinc      6391 Mar  3 20:18 heartbeat.json
[2026-03-03 20:18:57] -rw-r--r-- 1 boinc boinc      8192 Mar  3 20:18 boinc_mmap_file
[2026-03-03 20:18:57] -rw-r--r-- 1 boinc boinc        27 Mar  3 20:18 wrapper_checkpoint.txt
[2026-03-03 20:18:57] -rw------- 1 boinc boinc      4830 Mar  3 20:18 pilotlog.txt
[2026-03-03 20:18:57] -rw------- 1 boinc boinc   1329853 Mar  3 20:18 log.48700858._001798.job.log.1
[2026-03-03 20:18:57] -rw------- 1 boinc boinc       357 Mar  3 20:18 output.list
[2026-03-03 20:18:57] -rw-r--r-- 1 boinc boinc       620 Mar  3 20:18 runtime_log
[2026-03-03 20:18:57] -rw------- 1 boinc boinc   1689600 Mar  3 20:18 result.tar.gz
[2026-03-03 20:18:57] -rw-r--r-- 1 boinc boinc      9204 Mar  3 20:18 runtime_log.err
[2026-03-03 20:18:57] -rw------- 1 boinc boinc       662 Mar  3 20:18 WilLDmwmHH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmIMDLDmc2oxzn.diag
[2026-03-03 20:18:57] -rw-r--r-- 1 boinc boinc     21106 Mar  3 20:18 stderr.txt
[2026-03-03 20:18:57] HITS file was successfully produced:
[2026-03-03 20:18:57] -rw------- 1 boinc boinc 144169138 Mar  3 20:17 shared/HITS.pool.root.1
[2026-03-03 20:18:57]  *** Contents of shared directory: ***
[2026-03-03 20:18:57] total 327428
[2026-03-03 20:18:57] -rw-r--r-- 2 boinc boinc 188799336 Mar  3 17:42 ATLAS.root_0
[2026-03-03 20:18:57] -rw-r--r-- 2 boinc boinc     15845 Mar  3 17:42 start_atlas.sh
[2026-03-03 20:18:57] -rw-r--r-- 2 boinc boinc    597937 Mar  3 17:42 input.tar.gz
[2026-03-03 20:18:57] -rw------- 1 boinc boinc 144169138 Mar  3 20:17 HITS.pool.root.1
[2026-03-03 20:18:57] -rw------- 1 boinc boinc   1689600 Mar  3 20:18 result.tar.gz
20:18:58 (1667293): run_atlas exited; CPU time 35932.826282
20:18:58 (1667293): called boinc_finish(0)

</stderr_txt>
]]>

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