Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:54:48 (1883129): wrapper (7.7.26015): starting
09:54:48 (1883129): wrapper: running run_atlas (--nthreads 12)
[2026-03-02 09:54:48] Arguments: --nthreads 12
[2026-03-02 09:54:48] Threads: 12
[2026-03-02 09:54:48] Checking for CVMFS
[2026-03-02 09:54:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 09:54:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 09:54:49] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 09:54:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 09:54:49] 2.11.5.0 3857663 131773 368596 156814 3 371 26775858 45568000 17188 130560 0 742324816 99.797 454791358 17243 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-03-02 09:54:49] CVMFS is ok
[2026-03-02 09:54:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 09:54:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 09:54:49] Further information can be found at the LHC@home message board.
[2026-03-02 09:54:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 09:54:49] Checking for apptainer binary...
[2026-03-02 09:54:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 09:54:49] Running /usr/bin/apptainer --version
[2026-03-02 09:54:49] apptainer version 1.4.1-1.el9
[2026-03-02 09:54:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 09:54:50] wns0075.triumf.lcg
[2026-03-02 09:54:50] apptainer works
[2026-03-02 09:54:51] Set ATHENA_PROC_NUMBER=12
[2026-03-02 09:54:51] Set ATHENA_CORE_NUMBER=12
[2026-03-02 09:54:51] Starting ATLAS job with PandaID=7036015409
[2026-03-02 09:54:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 09:59:55]  *** The last 200 lines of the pilot log: ***
[2026-03-02 09:59:55] 2026-03-02 17:59:07,908 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 09:59:55] 2026-03-02 17:59:07,908 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 09:59:55] 2026-03-02 17:59:07,908 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | WARNING  | wrong length of table data, x=[1772474190.0], y=[2800.0] (must be same and length>=4)
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | ..............................
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | . Timing measurements:
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | . get job = 0 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | . initial setup = 25 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | . payload setup = 18 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | . stage-in = 0 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | . payload execution = 57 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | . stage-out = 2 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | . log creation = 0 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | ..............................
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036015409/pilotlog.txt
[2026-03-02 09:59:55] 2026-03-02 17:59:08,036 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-02 09:59:55] - Log from pilotlog.txt -
[2026-03-02 09:59:55] 2026-03-02 17:59:07,907 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7036015409/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 09:59:55] 2026-03-02 17:59:07,907 | INFO     | extracted standard info from prmon json
[2026-03-02 09:59:55] 2026-03-02 17:59:07,908 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 09:59:55] 2026-03-02 17:59:07,908 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 09:59:55] 2026-03-02 17:59:07,908 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 09:59:55] 2026-03-02 17:59:07,908 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | WARNING  | wrong length of table data, x=[1772474190.0], y=[2800.0] (must be same and length>=4)
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | ..............................
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | . Timing measurements:
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | . get job = 0 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | . initial setup = 25 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | . payload setup = 18 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | . stage-in = 0 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | . payload execution = 57 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | . stage-out = 2 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | . log creation = 0 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | ..............................
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036015409/pilotlog.txt
[2026-03-02 09:59:55] 2026-03-02 17:59:08,037 | WARNING  | 
[2026-03-02 09:59:55] [begin log extracts]
[2026-03-02 09:59:55] - Log from pilotlog.txt -
[2026-03-02 09:59:55] 2026-03-02 17:59:07,907 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7036015409/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 09:59:55] 2026-03-02 17:59:07,907 | INFO     | extracted standard info from prmon json
[2026-03-02 09:59:55] 2026-03-02 17:59:07,908 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 09:59:55] 2026-03-02 17:59:07,908 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 09:59:55] 2026-03-02 17:59:07,908 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 09:59:55] 2026-03-02 17:59:07,908 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | WARNING  | wrong length of table data, x=[1772474190.0], y=[2800.0] (must be same and length>=4)
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | ..............................
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | . Timing measurements:
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | . get job = 0 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | . initial setup = 25 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,909 | INFO     | . payload setup = 18 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | . stage-in = 0 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | . payload execution = 57 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | . stage-out = 2 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | . log creation = 0 s
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | ..............................
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 09:59:55] 2026-03-02 17:59:07,910 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036015409/pilotlog.txt
[2026-03-02 09:59:55] [end log extracts]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,037 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-02 09:59:55] 2026-03-02 17:59:08,038 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-02 09:59:55] 2026-03-02 17:59:08,341 | INFO     | 
[2026-03-02 09:59:55] 2026-03-02 17:59:08,342 | INFO     | job summary report
[2026-03-02 09:59:55] 2026-03-02 17:59:08,342 | INFO     | --------------------------------------------------
[2026-03-02 09:59:55] 2026-03-02 17:59:08,342 | INFO     | PanDA job id: 7036015409
[2026-03-02 09:59:55] 2026-03-02 17:59:08,342 | INFO     | task id: 48845148
[2026-03-02 09:59:55] 2026-03-02 17:59:08,342 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-02 09:57:00,964 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-02 09:59:55] 2026-03-02 17:59:08,342 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 09:59:55] 2026-03-02 17:59:08,342 | INFO     | pilot state: failed 
[2026-03-02 09:59:55] 2026-03-02 17:59:08,342 | INFO     | transexitcode: 65
[2026-03-02 09:59:55] 2026-03-02 17:59:08,342 | INFO     | exeerrorcode: 65
[2026-03-02 09:59:55] 2026-03-02 17:59:08,342 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-02 09:59:55] 2026-03-02 17:59:08,343 | INFO     | exitcode: 65
[2026-03-02 09:59:55] 2026-03-02 17:59:08,343 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-02 09:59:55] 2026-03-02 17:59:08,343 | INFO     | cpuconsumptiontime: 22 s
[2026-03-02 09:59:55] 2026-03-02 17:59:08,343 | INFO     | nevents: 0
[2026-03-02 09:59:55] 2026-03-02 17:59:08,343 | INFO     | neventsw: 0
[2026-03-02 09:59:55] 2026-03-02 17:59:08,343 | INFO     | pid: 1891505
[2026-03-02 09:59:55] 2026-03-02 17:59:08,343 | INFO     | pgrp: 1891505
[2026-03-02 09:59:55] 2026-03-02 17:59:08,343 | INFO     | corecount: 12
[2026-03-02 09:59:55] 2026-03-02 17:59:08,343 | INFO     | event service: False
[2026-03-02 09:59:55] 2026-03-02 17:59:08,343 | INFO     | sizes: {0: 2281914, 1: 2282347, 2: 2282375, 80: 2305650, 82: 2309998, 198: 2310136}
[2026-03-02 09:59:55] 2026-03-02 17:59:08,343 | INFO     | --------------------------------------------------
[2026-03-02 09:59:55] 2026-03-02 17:59:08,343 | INFO     | 
[2026-03-02 09:59:55] 2026-03-02 17:59:08,344 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-02 09:59:55] 2026-03-02 17:59:08,576 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,576 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,576 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,576 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,577 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,577 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,577 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,577 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,577 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,577 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,577 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,577 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,577 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,577 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,577 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,578 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,578 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,578 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 09:59:55] 2026-03-02 17:59:08,578 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,578 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 09:59:55] 2026-03-02 17:59:08,578 | INFO     | job 7036015409 has completed (purged errors)
[2026-03-02 09:59:55] 2026-03-02 17:59:08,578 | INFO     | overall cleanup function is called
[2026-03-02 09:59:55] 2026-03-02 17:59:09,609 | INFO     | --- collectZombieJob: --- 10, [1891505]
[2026-03-02 09:59:55] 2026-03-02 17:59:09,609 | INFO     | zombie collector waiting for pid 1891505
[2026-03-02 09:59:55] 2026-03-02 17:59:09,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 09:59:55] 2026-03-02 17:59:09,610 | INFO     | collected zombie processes
[2026-03-02 09:59:55] 2026-03-02 17:59:09,610 | INFO     | will attempt to kill all subprocesses of pid=1891505
[2026-03-02 09:59:55] 2026-03-02 17:59:10,594 | INFO     | process IDs to be killed: [1891505] (in reverse order)
[2026-03-02 09:59:55] 2026-03-02 17:59:11,046 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 09:59:55] 2026-03-02 17:59:11,046 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 09:59:55] 2026-03-02 17:59:11,065 | INFO     | did not find any defunct processes belonging to 1891505
[2026-03-02 09:59:55] 2026-03-02 17:59:11,088 | INFO     | did not find any defunct processes belonging to 1891505
[2026-03-02 09:59:55] 2026-03-02 17:59:11,088 | INFO     | ready for new job
[2026-03-02 09:59:55] 2026-03-02 17:59:11,089 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 09:59:55] 2026-03-02 17:59:11,094 | INFO     | **************************************
[2026-03-02 09:59:55] 2026-03-02 17:59:11,094 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 09:59:55] 2026-03-02 17:59:11,094 | INFO     | **************************************
[2026-03-02 09:59:55] 2026-03-02 17:59:11,094 | INFO     | 
[2026-03-02 09:59:55] 2026-03-02 17:59:11,113 | INFO     | architecture information:
[2026-03-02 09:59:55] 2026-03-02 17:59:11,127 | INFO     | executing command: cat /etc/os-release
[2026-03-02 09:59:55] 2026-03-02 17:59:11,266 | INFO     | cat /etc/os-release:
[2026-03-02 09:59:55] NAME="CentOS Linux"
[2026-03-02 09:59:55] VERSION="7 (Core)"
[2026-03-02 09:59:55] ID="centos"
[2026-03-02 09:59:55] ID_LIKE="rhel fedora"
[2026-03-02 09:59:55] VERSION_ID="7"
[2026-03-02 09:59:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 09:59:55] ANSI_COLOR="0;31"
[2026-03-02 09:59:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 09:59:55] HOME_URL="https://www.centos.org/"
[2026-03-02 09:59:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 09:59:55] 
[2026-03-02 09:59:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 09:59:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 09:59:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 09:59:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 09:59:55] 
[2026-03-02 09:59:55] 2026-03-02 17:59:11,267 | INFO     | **************************************
[2026-03-02 09:59:55] 2026-03-02 17:59:11,779 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-02 09:59:55] 2026-03-02 17:59:11,844 | INFO     | sufficient remaining disk space (2147362013184 B)
[2026-03-02 09:59:55] 2026-03-02 17:59:11,844 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 09:59:55] 2026-03-02 17:59:11,844 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 09:59:55] 2026-03-02 17:59:11,844 | INFO     | update_server=False
[2026-03-02 09:59:55] 2026-03-02 17:59:11,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 09:59:55] 2026-03-02 17:59:11,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 09:59:55] 2026-03-02 17:59:11,845 | INFO     | aborting loop
[2026-03-02 09:59:55] 2026-03-02 17:59:11,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 09:59:55] 2026-03-02 17:59:11,989 | INFO     | all data control threads have been joined
[2026-03-02 09:59:55] 2026-03-02 17:59:12,294 | INFO     | all job control threads have been joined
[2026-03-02 09:59:55] 2026-03-02 17:59:12,850 | INFO     | [job] retrieve thread has finished
[2026-03-02 09:59:55] 2026-03-02 17:59:12,851 | INFO     | [job] job monitor thread has finished
[2026-03-02 09:59:55] 2026-03-02 17:59:12,887 | INFO     | all payload control threads have been joined
[2026-03-02 09:59:55] 2026-03-02 17:59:12,897 | INFO     | [job] validate thread has finished
[2026-03-02 09:59:55] 2026-03-02 17:59:12,970 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 09:59:55] 2026-03-02 17:59:12,971 | INFO     | [data] copytool_in thread has finished
[2026-03-02 09:59:55] 2026-03-02 17:59:12,971 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 09:59:55] 2026-03-02 17:59:12,995 | INFO     | [data] control thread has finished
[2026-03-02 09:59:55] 2026-03-02 17:59:13,130 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 09:59:55] 2026-03-02 17:59:13,268 | INFO     | [payload] failed_post thread has finished
[2026-03-02 09:59:55] 2026-03-02 17:59:13,270 | INFO     | [payload] validate_post thread has finished
[2026-03-02 09:59:55] 2026-03-02 17:59:13,300 | INFO     | [job] control thread has finished
[2026-03-02 09:59:55] 2026-03-02 17:59:13,327 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 09:59:55] 2026-03-02 17:59:13,355 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 09:59:55] 2026-03-02 17:59:13,892 | INFO     | [payload] control thread has finished
[2026-03-02 09:59:55] 2026-03-02 17:59:14,008 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 09:59:55] 2026-03-02 17:59:14,361 | INFO     | [job] queue monitor thread has finished
[2026-03-02 09:59:55] 2026-03-02 17:59:15,334 | INFO     | [data] copytool_out thread has finished
[2026-03-02 09:59:55] 2026-03-02 17:59:15,854 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 09:59:55] 2026-03-02 17:59:41,266 | INFO     | PID=1886895 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 09:59:55] 2026-03-02 17:59:41,266 | INFO     | .. there are 28 such processes running
[2026-03-02 09:59:55] 2026-03-02 17:59:41,278 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 09:59:55] 2026-03-02 17:59:41,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 09:59:55] 2026-03-02 17:59:41,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 09:59:55] 2026-03-02 17:59:47,807 | INFO     | [monitor] cgroup control has ended
[2026-03-02 09:59:55] 2026-03-02 17:59:49,565 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140168621360960)>', '<ExcThread(monitor, started 140168229005056)>']
[2026-03-02 09:59:55] 2026-03-02 17:59:50,332 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 09:59:55] 2026-03-02 17:59:50,332 | INFO     | [monitor] control thread has ended
[2026-03-02 09:59:55] 2026-03-02 17:59:54,591 | INFO     | all workflow threads have been joined
[2026-03-02 09:59:55] 2026-03-02 17:59:54,591 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 09:59:55] 2026-03-02 17:59:54,592 | INFO     | traces error code: 0
[2026-03-02 09:59:55] 2026-03-02 17:59:54,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 09:59:55] 2026-03-02 17:59:55,228 [wrapper] ==== pilot stdout END ====
[2026-03-02 09:59:55] 2026-03-02 17:59:55,233 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 09:59:55] 2026-03-02 17:59:55,236 [wrapper] pilotpid: 1886895
[2026-03-02 09:59:55] 2026-03-02 17:59:55,239 [wrapper] Pilot exit status: 0
[2026-03-02 09:59:55] 2026-03-02 17:59:55,304 [wrapper] pandaids: 7036015409
[2026-03-02 09:59:55] 2026-03-02 17:59:55,579 [wrapper] cleanup supervisor_pilot 1886901 1886896
[2026-03-02 09:59:55] 2026-03-02 17:59:55,587 [wrapper] Test setup, not cleaning
[2026-03-02 09:59:55] 2026-03-02 17:59:55,594 [wrapper] apfmon messages muted
[2026-03-02 09:59:55] 2026-03-02 17:59:55,601 [wrapper] ==== wrapper stdout END ====
[2026-03-02 09:59:55] 2026-03-02 17:59:55,613 [wrapper] ==== wrapper stderr END ====
[2026-03-02 09:59:55]  *** Error codes and diagnostics ***
[2026-03-02 09:59:55]     "exeErrorCode": 65,
[2026-03-02 09:59:55]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-02 09:59:55]     "pilotErrorCode": 1305,
[2026-03-02 09:59:55]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-02 09:59:55]  *** Listing of results directory ***
[2026-03-02 09:59:55] total 285936
[2026-03-02 09:59:55] -rw-r--r--. 1 boinc boinc    584627 Mar  2 06:48 pilot3.tar.gz
[2026-03-02 09:59:55] -rw-r--r--. 1 boinc boinc      5111 Mar  2 06:48 queuedata.json
[2026-03-02 09:59:55] -rwx------. 1 boinc boinc     36322 Mar  2 06:48 runpilot2-wrapper.sh
[2026-03-02 09:59:55] -rw-r--r--. 1 boinc boinc       100 Mar  2 09:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 09:59:55] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 09:54 run_atlas
[2026-03-02 09:59:55] -rw-r--r--. 1 boinc boinc       105 Mar  2 09:54 job.xml
[2026-03-02 09:59:55] -rw-r--r--. 1 boinc boinc      6593 Mar  2 09:54 init_data.xml
[2026-03-02 09:59:55] -rw-r--r--. 2 boinc boinc 288658103 Mar  2 09:54 EVNT.48449632._000002.pool.root.1
[2026-03-02 09:59:55] -rw-r--r--. 2 boinc boinc    597974 Mar  2 09:54 input.tar.gz
[2026-03-02 09:59:55] -rw-r--r--. 2 boinc boinc     15845 Mar  2 09:54 start_atlas.sh
[2026-03-02 09:59:55] drwxrwx--x. 2 boinc boinc      4096 Mar  2 09:54 shared
[2026-03-02 09:59:55] -rw-r--r--. 1 boinc boinc         0 Mar  2 09:54 boinc_lockfile
[2026-03-02 09:59:55] -rw-r--r--. 1 boinc boinc      2624 Mar  2 09:54 pandaJob.out
[2026-03-02 09:59:55] -rw-------. 1 boinc boinc    998486 Mar  2 09:55 agis_schedconf.cvmfs.json
[2026-03-02 09:59:55] -rw-------. 1 boinc boinc   1512931 Mar  2 09:55 agis_ddmendpoints.agis.ALL.json
[2026-03-02 09:59:55] -rw-------. 1 boinc boinc       438 Mar  2 09:55 workernode_map.json
[2026-03-02 09:59:55] drwx------. 5 boinc boinc      4096 Mar  2 09:55 pilot3
[2026-03-02 09:59:55] -rw-r--r--. 1 boinc boinc       525 Mar  2 09:56 boinc_task_state.xml
[2026-03-02 09:59:55] -rw-------. 1 boinc boinc       955 Mar  2 09:57 memory_monitor_summary.json
[2026-03-02 09:59:55] -rw-------. 1 boinc boinc     21845 Mar  2 09:57 log.48845148._000039.job.log.tgz.1
[2026-03-02 09:59:55] -rw-------. 1 boinc boinc      7016 Mar  2 09:59 heartbeat.json
[2026-03-02 09:59:55] -rw-------. 1 boinc boinc        95 Mar  2 09:59 pilot_heartbeat.json
[2026-03-02 09:59:55] -rw-------. 1 boinc boinc      4819 Mar  2 09:59 pilotlog.txt
[2026-03-02 09:59:55] -rw-------. 1 boinc boinc     86322 Mar  2 09:59 log.48845148._000039.job.log.1
[2026-03-02 09:59:55] -rw-------. 1 boinc boinc       188 Mar  2 09:59 output.list
[2026-03-02 09:59:55] -rw-r--r--. 1 boinc boinc       620 Mar  2 09:59 runtime_log
[2026-03-02 09:59:55] -rw-------. 1 boinc boinc    122880 Mar  2 09:59 result.tar.gz
[2026-03-02 09:59:55] -rw-r--r--. 1 boinc boinc      8635 Mar  2 09:59 runtime_log.err
[2026-03-02 09:59:55] -rw-------. 1 boinc boinc       643 Mar  2 09:59 dXhLDmdkJH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvgDLDmKZkaVo.diag
[2026-03-02 09:59:55] -rw-r--r--. 1 boinc boinc      8192 Mar  2 09:59 boinc_mmap_file
[2026-03-02 09:59:55] -rw-r--r--. 1 boinc boinc        23 Mar  2 09:59 wrapper_checkpoint.txt
[2026-03-02 09:59:55] -rw-r--r--. 1 boinc boinc     21766 Mar  2 09:59 stderr.txt
[2026-03-02 09:59:56] No HITS result produced
[2026-03-02 09:59:56]  *** Contents of shared directory: ***
[2026-03-02 09:59:56] total 282620
[2026-03-02 09:59:56] -rw-r--r--. 2 boinc boinc 288658103 Mar  2 09:54 ATLAS.root_0
[2026-03-02 09:59:56] -rw-r--r--. 2 boinc boinc    597974 Mar  2 09:54 input.tar.gz
[2026-03-02 09:59:56] -rw-r--r--. 2 boinc boinc     15845 Mar  2 09:54 start_atlas.sh
[2026-03-02 09:59:56] -rw-------. 1 boinc boinc    122880 Mar  2 09:59 result.tar.gz
09:59:57 (1883129): run_atlas exited; CPU time 30.942068
09:59:57 (1883129): called boinc_finish(0)

</stderr_txt>
]]>

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