Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:53:22 (26026): wrapper (7.7.26015): starting
06:53:22 (26026): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 06:53:22] Arguments: --nthreads 8
[2026-03-03 06:53:22] Threads: 8
[2026-03-03 06:53:22] Checking for CVMFS
[2026-03-03 06:53:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 06:53:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 06:53:24] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 06:53:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 06:53:25] 2.11.2.0 7091 111341 132552 156834 3 53 18941566 25165824 899 130560 156 34505725 99.799 24352325 868 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-03 06:53:25] CVMFS is ok
[2026-03-03 06:53:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 06:53:25] Checking for apptainer binary...
[2026-03-03 06:53:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 06:53:25] Running /usr/bin/apptainer --version
[2026-03-03 06:53:25] apptainer version 1.3.2-1.el7
[2026-03-03 06:53:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 06:53:35] cg-vwn433.simple-grid.lan
[2026-03-03 06:53:35] apptainer works
[2026-03-03 06:53:35] Set ATHENA_PROC_NUMBER=8
[2026-03-03 06:53:35] Set ATHENA_CORE_NUMBER=8
[2026-03-03 06:53:35] Starting ATLAS job with PandaID=7036015428
[2026-03-03 06:53:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 22:57:40]  *** The last 200 lines of the pilot log: ***
[2026-03-03 22:57:40] 2026-03-03 21:56:46,465 | INFO     | sum of square deviations: 255091919628.0
[2026-03-03 22:57:40] 2026-03-03 21:56:46,491 | INFO     | sum of deviations: 725168431452.9999
[2026-03-03 22:57:40] 2026-03-03 21:56:46,491 | INFO     | mean x: 1772546435.0
[2026-03-03 22:57:40] 2026-03-03 21:56:46,492 | INFO     | mean y: 2521526.172892209
[2026-03-03 22:57:40] 2026-03-03 21:56:46,492 | INFO     | intersect: -5036425688.701828
[2026-03-03 22:57:40] 2026-03-03 21:56:46,493 | INFO     | chi2: 8.013044362576041
[2026-03-03 22:57:40] 2026-03-03 21:56:46,495 | INFO     | sum of square deviations: 251030020213.0
[2026-03-03 22:57:40] 2026-03-03 21:56:46,517 | INFO     | time since job start (57413s) is within the limit (349056.0s)
[2026-03-03 22:57:40] 2026-03-03 21:56:46,521 | INFO     | sum of deviations: 783630864545.4999
[2026-03-03 22:57:40] 2026-03-03 21:56:46,522 | INFO     | mean x: 1772546282.5
[2026-03-03 22:57:40] 2026-03-03 21:56:46,522 | INFO     | mean y: 2523710.765021459
[2026-03-03 22:57:40] 2026-03-03 21:56:46,522 | INFO     | intersect: -5530766589.031775
[2026-03-03 22:57:40] 2026-03-03 21:56:46,523 | INFO     | chi2: 7.258256225930597
[2026-03-03 22:57:40] 2026-03-03 21:56:46,524 | INFO     | current chi2=7.258256225930597 (change=9.419492798150362 %)
[2026-03-03 22:57:40] 2026-03-03 21:56:46,524 | INFO     | right removable region: 931
[2026-03-03 22:57:40] 2026-03-03 21:56:46,525 | INFO     | sum of square deviations: 251030020213.0
[2026-03-03 22:57:40] 2026-03-03 21:56:46,551 | INFO     | sum of deviations: 387669258048.49994
[2026-03-03 22:57:40] 2026-03-03 21:56:46,552 | INFO     | mean x: 1772546587.5
[2026-03-03 22:57:40] 2026-03-03 21:56:46,552 | INFO     | mean y: 2534194.6856223177
[2026-03-03 22:57:40] 2026-03-03 21:56:46,552 | INFO     | intersect: -2734834905.031877
[2026-03-03 22:57:40] 2026-03-03 21:56:46,553 | INFO     | chi2: 3.444626068472557
[2026-03-03 22:57:40] 2026-03-03 21:56:46,553 | INFO     | current chi2=3.444626068472557 (change=57.01226759007765 %)
[2026-03-03 22:57:40] 2026-03-03 21:56:46,555 | INFO     | sum of square deviations: 247011470448.0
[2026-03-03 22:57:40] 2026-03-03 21:56:46,581 | INFO     | sum of deviations: 142184636052.99994
[2026-03-03 22:57:40] 2026-03-03 21:56:46,582 | INFO     | mean x: 1772546740.0
[2026-03-03 22:57:40] 2026-03-03 21:56:46,582 | INFO     | mean y: 2543506.207119741
[2026-03-03 22:57:40] 2026-03-03 21:56:46,582 | INFO     | intersect: -1017769083.5553374
[2026-03-03 22:57:40] 2026-03-03 21:56:46,583 | INFO     | chi2: 1.055041584280337
[2026-03-03 22:57:40] 2026-03-03 21:56:46,583 | INFO     | current chi2=1.055041584280337 (change=69.3713754901654 %)
[2026-03-03 22:57:40] 2026-03-03 21:56:46,585 | INFO     | sum of square deviations: 243036037770.5
[2026-03-03 22:57:40] 2026-03-03 21:56:46,611 | INFO     | sum of deviations: 81912289193.00002
[2026-03-03 22:57:40] 2026-03-03 21:56:46,611 | INFO     | mean x: 1772546892.5
[2026-03-03 22:57:40] 2026-03-03 21:56:46,611 | INFO     | mean y: 2545817.262472885
[2026-03-03 22:57:40] 2026-03-03 21:56:46,612 | INFO     | intersect: -594869179.2892741
[2026-03-03 22:57:40] 2026-03-03 21:56:46,613 | INFO     | chi2: 0.9166355216564035
[2026-03-03 22:57:40] 2026-03-03 21:56:46,613 | INFO     | current chi2=0.9166355216564035 (change=13.11854098322984 %)
[2026-03-03 22:57:40] 2026-03-03 21:56:46,613 | INFO     | left removable region: 30
[2026-03-03 22:57:40] 2026-03-03 21:56:46,615 | INFO     | sum of square deviations: 226804810650.0
[2026-03-03 22:57:40] 2026-03-03 21:56:46,640 | INFO     | sum of deviations: 64992601218.99999
[2026-03-03 22:57:40] 2026-03-03 21:56:46,640 | INFO     | mean x: 1772547167.0
[2026-03-03 22:57:40] 2026-03-03 21:56:46,640 | INFO     | mean y: 2551202.2896781354
[2026-03-03 22:57:40] 2026-03-03 21:56:46,640 | INFO     | intersect: -505385339.4289054
[2026-03-03 22:57:40] 2026-03-03 21:56:46,641 | INFO     | chi2: 0.011534693799632277
[2026-03-03 22:57:40] 2026-03-03 21:56:46,642 | INFO     | current memory leak: 0.29 B/s (using 901 data points, chi2=0.01)
[2026-03-03 22:57:40] 2026-03-03 21:56:46,643 | INFO     | could have reported an average CPU frequency of 1999 MHz (35 samples)
[2026-03-03 22:57:40] 2026-03-03 21:56:46,643 | INFO     | ..............................
[2026-03-03 22:57:40] 2026-03-03 21:56:46,643 | INFO     | . Timing measurements:
[2026-03-03 22:57:40] 2026-03-03 21:56:46,644 | INFO     | . get job = 0 s
[2026-03-03 22:57:40] 2026-03-03 21:56:46,644 | INFO     | . initial setup = 121 s
[2026-03-03 22:57:40] 2026-03-03 21:56:46,644 | INFO     | . payload setup = 155 s
[2026-03-03 22:57:40] 2026-03-03 21:56:46,644 | INFO     | . stage-in = 0 s
[2026-03-03 22:57:40] 2026-03-03 21:56:46,644 | INFO     | . payload execution = 57249 s
[2026-03-03 22:57:40] 2026-03-03 21:56:46,644 | INFO     | . stage-out = 2 s
[2026-03-03 22:57:40] 2026-03-03 21:56:46,644 | INFO     | . log creation = 0 s
[2026-03-03 22:57:40] 2026-03-03 21:56:46,644 | INFO     | ..............................
[2026-03-03 22:57:40] 2026-03-03 21:56:46,774 | INFO     | 
[2026-03-03 22:57:40] 2026-03-03 21:56:46,775 | INFO     | job summary report
[2026-03-03 22:57:40] 2026-03-03 21:56:46,775 | INFO     | --------------------------------------------------
[2026-03-03 22:57:40] 2026-03-03 21:56:46,775 | INFO     | PanDA job id: 7036015428
[2026-03-03 22:57:40] 2026-03-03 21:56:46,775 | INFO     | task id: 48845148
[2026-03-03 22:57:40] 2026-03-03 21:56:46,775 | INFO     | errors: (none)
[2026-03-03 22:57:40] 2026-03-03 21:56:46,775 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 22:57:40] 2026-03-03 21:56:46,775 | INFO     | pilot state: finished 
[2026-03-03 22:57:40] 2026-03-03 21:56:46,776 | INFO     | transexitcode: 0
[2026-03-03 22:57:40] 2026-03-03 21:56:46,776 | INFO     | exeerrorcode: 0
[2026-03-03 22:57:40] 2026-03-03 21:56:46,776 | INFO     | exeerrordiag: 
[2026-03-03 22:57:40] 2026-03-03 21:56:46,776 | INFO     | exitcode: 0
[2026-03-03 22:57:40] 2026-03-03 21:56:46,776 | INFO     | exitmsg: OK
[2026-03-03 22:57:40] 2026-03-03 21:56:46,776 | INFO     | cpuconsumptiontime: 224995 s
[2026-03-03 22:57:40] 2026-03-03 21:56:46,776 | INFO     | nevents: 400
[2026-03-03 22:57:40] 2026-03-03 21:56:46,776 | INFO     | neventsw: 0
[2026-03-03 22:57:40] 2026-03-03 21:56:46,776 | INFO     | pid: 2075
[2026-03-03 22:57:40] 2026-03-03 21:56:46,776 | INFO     | pgrp: 2075
[2026-03-03 22:57:40] 2026-03-03 21:56:46,777 | INFO     | corecount: 8
[2026-03-03 22:57:40] 2026-03-03 21:56:46,777 | INFO     | event service: False
[2026-03-03 22:57:40] 2026-03-03 21:56:46,777 | INFO     | sizes: {0: 2281917, 1: 2282378, 57408: 2332895, 57409: 2332894, 57411: 2346803, 57412: 2346941}
[2026-03-03 22:57:40] 2026-03-03 21:56:46,777 | INFO     | --------------------------------------------------
[2026-03-03 22:57:40] 2026-03-03 21:56:46,777 | INFO     | 
[2026-03-03 22:57:40] 2026-03-03 21:56:46,777 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-03-03 22:57:40] 2026-03-03 21:56:46,848 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,849 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,849 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,849 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,849 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,849 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,849 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,850 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,850 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,850 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,850 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,850 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,850 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,851 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,851 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,851 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,851 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,851 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 22:57:40] 2026-03-03 21:56:46,851 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,851 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 22:57:40] 2026-03-03 21:56:46,851 | INFO     | job 7036015428 has completed (purged errors)
[2026-03-03 22:57:40] 2026-03-03 21:56:46,852 | INFO     | overall cleanup function is called
[2026-03-03 22:57:40] 2026-03-03 21:56:46,943 | WARNING  | process 2075 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 22:57:40] 2026-03-03 21:56:46,996 | INFO     | using path: /var/lib/boinc/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 22:57:40] 2026-03-03 21:56:46,997 | INFO     | using path: /var/lib/boinc/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 22:57:40] 2026-03-03 21:56:46,997 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-03 22:57:40] 2026-03-03 21:56:46,997 | WARNING  | maxPSS not found in memory monitor output
[2026-03-03 22:57:40] 2026-03-03 21:56:47,074 | INFO     | number of running child processes to parent process 2075: 1
[2026-03-03 22:57:40] 2026-03-03 21:56:47,074 | INFO     | maximum number of monitored processes: 8
[2026-03-03 22:57:40] 2026-03-03 21:56:47,074 | INFO     | aborting job monitoring since job object (job id=7036015428) has expired
[2026-03-03 22:57:40] 2026-03-03 21:56:47,861 | INFO     | --- collectZombieJob: --- 10, [2075]
[2026-03-03 22:57:40] 2026-03-03 21:56:47,862 | INFO     | zombie collector waiting for pid 2075
[2026-03-03 22:57:40] 2026-03-03 21:56:47,862 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 22:57:40] 2026-03-03 21:56:47,862 | INFO     | collected zombie processes
[2026-03-03 22:57:40] 2026-03-03 21:56:47,862 | INFO     | will attempt to kill all subprocesses of pid=2075
[2026-03-03 22:57:40] 2026-03-03 21:56:47,946 | INFO     | process IDs to be killed: [2075] (in reverse order)
[2026-03-03 22:57:40] 2026-03-03 21:56:47,996 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 22:57:40] 2026-03-03 21:56:47,997 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 22:57:40] 2026-03-03 21:56:47,999 | INFO     | did not find any defunct processes belonging to 2075
[2026-03-03 22:57:40] 2026-03-03 21:56:48,001 | INFO     | did not find any defunct processes belonging to 2075
[2026-03-03 22:57:40] 2026-03-03 21:56:48,001 | INFO     | ready for new job
[2026-03-03 22:57:40] 2026-03-03 21:56:48,002 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 22:57:40] 2026-03-03 21:56:48,006 | INFO     | **************************************
[2026-03-03 22:57:40] 2026-03-03 21:56:48,006 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 22:57:40] 2026-03-03 21:56:48,006 | INFO     | **************************************
[2026-03-03 22:57:40] 2026-03-03 21:56:48,006 | INFO     | 
[2026-03-03 22:57:40] 2026-03-03 21:56:48,007 | INFO     | pilot is running in a VM
[2026-03-03 22:57:40] 2026-03-03 21:56:48,007 | INFO     | architecture information:
[2026-03-03 22:57:40] 2026-03-03 21:56:48,007 | INFO     | executing command: cat /etc/os-release
[2026-03-03 22:57:40] 2026-03-03 21:56:48,055 | INFO     | cat /etc/os-release:
[2026-03-03 22:57:40] NAME="CentOS Linux"
[2026-03-03 22:57:40] VERSION="7 (Core)"
[2026-03-03 22:57:40] ID="centos"
[2026-03-03 22:57:40] ID_LIKE="rhel fedora"
[2026-03-03 22:57:40] VERSION_ID="7"
[2026-03-03 22:57:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 22:57:40] ANSI_COLOR="0;31"
[2026-03-03 22:57:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 22:57:40] HOME_URL="https://www.centos.org/"
[2026-03-03 22:57:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 22:57:40] 
[2026-03-03 22:57:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 22:57:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 22:57:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 22:57:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 22:57:40] 
[2026-03-03 22:57:40] 2026-03-03 21:56:48,055 | INFO     | **************************************
[2026-03-03 22:57:40] 2026-03-03 21:56:48,559 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-03-03 22:57:40] 2026-03-03 21:56:48,590 | INFO     | sufficient remaining disk space (495344156672 B)
[2026-03-03 22:57:40] 2026-03-03 21:56:48,591 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 22:57:40] 2026-03-03 21:56:48,591 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 22:57:40] 2026-03-03 21:56:48,591 | INFO     | update_server=False
[2026-03-03 22:57:40] 2026-03-03 21:56:48,591 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 22:57:40] 2026-03-03 21:56:48,591 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 22:57:40] 2026-03-03 21:56:48,591 | INFO     | aborting loop
[2026-03-03 22:57:40] 2026-03-03 21:56:48,592 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 22:57:40] 2026-03-03 21:56:48,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 22:57:40] 2026-03-03 21:56:48,991 | INFO     | all data control threads have been joined
[2026-03-03 22:57:40] 2026-03-03 21:56:49,106 | INFO     | all payload control threads have been joined
[2026-03-03 22:57:40] 2026-03-03 21:56:49,494 | INFO     | all job control threads have been joined
[2026-03-03 22:57:40] 2026-03-03 21:56:49,597 | INFO     | [job] retrieve thread has finished
[2026-03-03 22:57:40] 2026-03-03 21:56:49,597 | INFO     | [job] job monitor thread has finished
[2026-03-03 22:57:40] 2026-03-03 21:56:49,598 | INFO     | [job] queue monitor thread has finished
[2026-03-03 22:57:40] 2026-03-03 21:56:49,817 | INFO     | [data] copytool_in thread has finished
[2026-03-03 22:57:40] 2026-03-03 21:56:49,998 | INFO     | [data] control thread has finished
[2026-03-03 22:57:40] 2026-03-03 21:56:50,112 | INFO     | [payload] control thread has finished
[2026-03-03 22:57:40] 2026-03-03 21:56:50,434 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 22:57:40] 2026-03-03 21:56:50,501 | INFO     | [job] control thread has finished
[2026-03-03 22:57:40] 2026-03-03 21:56:50,544 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 22:57:40] 2026-03-03 21:56:50,725 | INFO     | [payload] failed_post thread has finished
[2026-03-03 22:57:40] 2026-03-03 21:56:50,782 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 22:57:40] 2026-03-03 21:56:50,787 | INFO     | [data] copytool_out thread has finished
[2026-03-03 22:57:40] 2026-03-03 21:56:51,073 | INFO     | [job] validate thread has finished
[2026-03-03 22:57:40] 2026-03-03 21:56:51,102 | INFO     | [payload] validate_post thread has finished
[2026-03-03 22:57:40] 2026-03-03 21:56:51,910 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 22:57:40] 2026-03-03 21:56:55,920 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 22:57:40] 2026-03-03 21:56:58,908 | INFO     | job.realtimelogging is not enabled
[2026-03-03 22:57:40] 2026-03-03 21:56:59,913 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 22:57:40] 2026-03-03 21:57:19,663 | INFO     | PID=29998 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-03 22:57:40] 2026-03-03 21:57:19,663 | INFO     | .. there are 2 such processes running
[2026-03-03 22:57:40] 2026-03-03 21:57:19,663 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 22:57:40] 2026-03-03 21:57:19,663 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 22:57:40] 2026-03-03 21:57:19,663 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 22:57:40] 2026-03-03 21:57:33,299 | INFO     | [monitor] cgroup control has ended
[2026-03-03 22:57:40] 2026-03-03 21:57:34,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140299793147712)>', '<ExcThread(monitor, started 140299116467968)>']
[2026-03-03 22:57:40] 2026-03-03 21:57:35,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 22:57:40] 2026-03-03 21:57:35,750 | INFO     | [monitor] control thread has ended
[2026-03-03 22:57:40] 2026-03-03 21:57:40,020 | INFO     | all workflow threads have been joined
[2026-03-03 22:57:40] 2026-03-03 21:57:40,020 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 22:57:40] 2026-03-03 21:57:40,020 | INFO     | traces error code: 0
[2026-03-03 22:57:40] 2026-03-03 21:57:40,020 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 22:57:40] 2026-03-03 21:57:40,163 [wrapper] ==== pilot stdout END ====
[2026-03-03 22:57:40] 2026-03-03 21:57:40,170 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 22:57:40] 2026-03-03 21:57:40,177 [wrapper] pilotpid: 29998
[2026-03-03 22:57:40] 2026-03-03 21:57:40,182 [wrapper] Pilot exit status: 0
[2026-03-03 22:57:40] 2026-03-03 21:57:40,211 [wrapper] pandaids: 7036015428
[2026-03-03 22:57:40] 2026-03-03 21:57:40,240 [wrapper] cleanup supervisor_pilot 12687 29999
[2026-03-03 22:57:40] 2026-03-03 21:57:40,254 [wrapper] Test setup, not cleaning
[2026-03-03 22:57:40] 2026-03-03 21:57:40,257 [wrapper] apfmon messages muted
[2026-03-03 22:57:40] 2026-03-03 21:57:40,259 [wrapper] ==== wrapper stdout END ====
[2026-03-03 22:57:40] 2026-03-03 21:57:40,264 [wrapper] ==== wrapper stderr END ====
[2026-03-03 22:57:40]  *** Error codes and diagnostics ***
[2026-03-03 22:57:40]     "exeErrorCode": 0,
[2026-03-03 22:57:40]     "exeErrorDiag": "",
[2026-03-03 22:57:40]     "pilotErrorCode": 0,
[2026-03-03 22:57:40]     "pilotErrorDiag": "",
[2026-03-03 22:57:40]  *** Listing of results directory ***
[2026-03-03 22:57:40] total 658096
[2026-03-03 22:57:40] -rw-r--r--. 1 boinc boinc    584627 Mar  2 15:48 pilot3.tar.gz
[2026-03-03 22:57:40] -rw-r--r--. 1 boinc boinc      5111 Mar  2 15:48 queuedata.json
[2026-03-03 22:57:40] -rwx------. 1 boinc boinc     36322 Mar  2 15:48 runpilot2-wrapper.sh
[2026-03-03 22:57:40] -rw-r--r--. 1 boinc boinc       100 Mar  3 06:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 22:57:40] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 06:53 run_atlas
[2026-03-03 22:57:40] -rw-r--r--. 1 boinc boinc       105 Mar  3 06:53 job.xml
[2026-03-03 22:57:40] -rw-r--r--. 1 boinc boinc      6391 Mar  3 06:53 init_data.xml
[2026-03-03 22:57:40] -rw-r--r--. 2 boinc boinc 290181654 Mar  3 06:53 EVNT.48449632._000003.pool.root.1
[2026-03-03 22:57:40] -rw-r--r--. 2 boinc boinc     15845 Mar  3 06:53 start_atlas.sh
[2026-03-03 22:57:40] drwxrwx--x. 2 boinc boinc        68 Mar  3 06:53 shared
[2026-03-03 22:57:40] -rw-r--r--. 2 boinc boinc    597962 Mar  3 06:53 input.tar.gz
[2026-03-03 22:57:40] -rw-r--r--. 1 boinc boinc         0 Mar  3 06:53 boinc_lockfile
[2026-03-03 22:57:40] -rw-r--r--. 1 boinc boinc      2624 Mar  3 06:53 pandaJob.out
[2026-03-03 22:57:40] -rw-------. 1 boinc boinc       415 Mar  3 06:59 workernode_map.json
[2026-03-03 22:57:40] -rw-------. 1 boinc boinc    997730 Mar  3 06:59 agis_schedconf.cvmfs.json
[2026-03-03 22:57:40] drwx------. 5 boinc boinc      4096 Mar  3 06:59 pilot3
[2026-03-03 22:57:40] -rw-------. 1 boinc boinc 361798879 Mar  3 22:55 HITS.48845148._000058.pool.root.1
[2026-03-03 22:57:40] -rw-r--r--. 1 boinc boinc       531 Mar  3 22:55 boinc_task_state.xml
[2026-03-03 22:57:40] -rw-------. 1 boinc boinc        95 Mar  3 22:56 pilot_heartbeat.json
[2026-03-03 22:57:40] -rw-------. 1 boinc boinc      1013 Mar  3 22:56 memory_monitor_summary.json
[2026-03-03 22:57:40] -rw-------. 1 boinc boinc   1516092 Mar  3 22:56 agis_ddmendpoints.agis.ALL.json
[2026-03-03 22:57:40] -rw-------. 1 boinc boinc   1050956 Mar  3 22:56 log.48845148._000058.job.log.tgz.1
[2026-03-03 22:57:40] -rw-------. 1 boinc boinc      6306 Mar  3 22:56 heartbeat.json
[2026-03-03 22:57:40] -rw-r--r--. 1 boinc boinc        29 Mar  3 22:57 wrapper_checkpoint.txt
[2026-03-03 22:57:40] -rw-r--r--. 1 boinc boinc      8192 Mar  3 22:57 boinc_mmap_file
[2026-03-03 22:57:40] -rw-------. 1 boinc boinc      4952 Mar  3 22:57 pilotlog.txt
[2026-03-03 22:57:40] -rw-------. 1 boinc boinc   7947209 Mar  3 22:57 log.48845148._000058.job.log.1
[2026-03-03 22:57:40] -rw-------. 1 boinc boinc       357 Mar  3 22:57 output.list
[2026-03-03 22:57:40] -rw-r--r--. 1 boinc boinc       620 Mar  3 22:57 runtime_log
[2026-03-03 22:57:40] -rw-------. 1 boinc boinc   9011200 Mar  3 22:57 result.tar.gz
[2026-03-03 22:57:40] -rw-------. 1 boinc boinc       658 Mar  3 22:57 TJ1LDmjkJH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmtdBLDmz7WHhn.diag
[2026-03-03 22:57:40] -rw-r--r--. 1 boinc boinc      8816 Mar  3 22:57 runtime_log.err
[2026-03-03 22:57:40] -rw-r--r--. 1 boinc boinc     20843 Mar  3 22:57 stderr.txt
[2026-03-03 22:57:40] HITS file was successfully produced:
[2026-03-03 22:57:40] -rw-------. 1 boinc boinc 361798879 Mar  3 22:55 shared/HITS.pool.root.1
[2026-03-03 22:57:40]  *** Contents of shared directory: ***
[2026-03-03 22:57:40] total 646104
[2026-03-03 22:57:40] -rw-r--r--. 2 boinc boinc 290181654 Mar  3 06:53 ATLAS.root_0
[2026-03-03 22:57:40] -rw-r--r--. 2 boinc boinc     15845 Mar  3 06:53 start_atlas.sh
[2026-03-03 22:57:40] -rw-r--r--. 2 boinc boinc    597962 Mar  3 06:53 input.tar.gz
[2026-03-03 22:57:40] -rw-------. 1 boinc boinc 361798879 Mar  3 22:55 HITS.pool.root.1
[2026-03-03 22:57:40] -rw-------. 1 boinc boinc   9011200 Mar  3 22:57 result.tar.gz
22:57:41 (26026): run_atlas exited; CPU time 225690.718184
22:57:41 (26026): called boinc_finish(0)

</stderr_txt>
]]>

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