Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:26:21 (788401): wrapper (7.7.26015): starting
17:26:21 (788401): wrapper: running run_atlas (--nthreads 3)
[2026-03-02 17:26:21] Arguments: --nthreads 3
[2026-03-02 17:26:21] Threads: 3
[2026-03-02 17:26:21] Checking for CVMFS
[2026-03-02 17:26:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 17:26:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 17:26:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 17:26:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 17:26:22] 2.9.2.0 2927 5732 81480 156813 1 50 5732541 36864000 0 130560 0 2209742 99.981 213984 13471 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-02 17:26:22] CVMFS is ok
[2026-03-02 17:26:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 17:26:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 17:26:22] Further information can be found at the LHC@home message board.
[2026-03-02 17:26:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 17:26:22] Checking for apptainer binary...
[2026-03-02 17:26:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 17:26:22] Running /usr/bin/apptainer --version
[2026-03-02 17:26:22] apptainer version 1.4.1-1.1
[2026-03-02 17:26:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 17:26:22] belleA259
[2026-03-02 17:26:22] apptainer works
[2026-03-02 17:26:22] Set ATHENA_PROC_NUMBER=3
[2026-03-02 17:26:22] Set ATHENA_CORE_NUMBER=3
[2026-03-02 17:26:22] Starting ATLAS job with PandaID=7035976113
[2026-03-02 17:26:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 19:07:46]  *** The last 200 lines of the pilot log: ***
[2026-03-02 19:07:46] 2026-03-02 18:07:01,834 | INFO     | will abort loop
[2026-03-02 19:07:46] 2026-03-02 18:07:01,861 | INFO     | all data control threads have been joined
[2026-03-02 19:07:46] 2026-03-02 18:07:02,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 19:07:46] 2026-03-02 18:07:02,639 | INFO     | [job] retrieve thread has finished
[2026-03-02 19:07:46] 2026-03-02 18:07:02,639 | INFO     | [job] queue monitor thread has finished
[2026-03-02 19:07:46] 2026-03-02 18:07:02,668 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 19:07:46] 2026-03-02 18:07:02,771 | INFO     | [payload] control thread has finished
[2026-03-02 19:07:46] 2026-03-02 18:07:02,781 | INFO     | [data] copytool_in thread has finished
[2026-03-02 19:07:46] 2026-03-02 18:07:02,838 | INFO     | [job] job monitor thread has finished
[2026-03-02 19:07:46] 2026-03-02 18:07:02,866 | INFO     | [data] control thread has finished
[2026-03-02 19:07:46] 2026-03-02 18:07:02,879 | INFO     | [payload] failed_post thread has finished
[2026-03-02 19:07:46] 2026-03-02 18:07:03,078 | INFO     | all job control threads have been joined
[2026-03-02 19:07:46] 2026-03-02 18:07:03,531 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 19:07:46] 2026-03-02 18:07:03,960 | INFO     | [payload] validate_post thread has finished
[2026-03-02 19:07:46] 2026-03-02 18:07:04,083 | INFO     | [job] control thread has finished
[2026-03-02 19:07:46] 2026-03-02 18:07:04,084 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 19:07:46] 2026-03-02 18:07:04,087 | INFO     | [job] validate thread has finished
[2026-03-02 19:07:46] 2026-03-02 18:07:04,362 | INFO     | [data] copytool_out thread has finished
[2026-03-02 19:07:46] 2026-03-02 18:07:05,641 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 19:07:46] 2026-03-02 18:07:12,673 | INFO     | job.realtimelogging is not enabled
[2026-03-02 19:07:46] 2026-03-02 18:07:13,679 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 19:07:46] 2026-03-02 18:07:32,340 | INFO     | PID=792448 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-02 19:07:46] 2026-03-02 18:07:32,340 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 19:07:46] 2026-03-02 18:07:32,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 19:07:46] 2026-03-02 18:07:32,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 19:07:46] 2026-03-02 18:07:39,941 | INFO     | [monitor] cgroup control has ended
[2026-03-02 19:07:46] 2026-03-02 18:07:41,558 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587983284032)>', '<ExcThread(monitor, started 140587340646144)>']
[2026-03-02 19:07:46] 2026-03-02 18:07:42,388 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 19:07:46] 2026-03-02 18:07:42,388 | INFO     | [monitor] control thread has ended
[2026-03-02 19:07:46] 2026-03-02 18:07:46,569 | INFO     | all workflow threads have been joined
[2026-03-02 19:07:46] 2026-03-02 18:07:46,569 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 19:07:46] 2026-03-02 18:07:46,570 | INFO     | traces error code: 0
[2026-03-02 19:07:46] 2026-03-02 18:07:46,570 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 19:07:46] 2026-03-02 18:07:46,620 [wrapper] ==== pilot stdout END ====
[2026-03-02 19:07:46] 2026-03-02 18:07:46,623 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 19:07:46] 2026-03-02 18:07:46,625 [wrapper] pilotpid: 792448
[2026-03-02 19:07:46] 2026-03-02 18:07:46,628 [wrapper] Pilot exit status: 0
[2026-03-02 19:07:46] 2026-03-02 18:07:46,636 [wrapper] pandaids: 7035976113
[2026-03-02 19:07:46] 2026-03-02 18:07:46,652 [wrapper] cleanup supervisor_pilot  802478 792449
[2026-03-02 19:07:46] 2026-03-02 18:07:46,655 [wrapper] Test setup, not cleaning
[2026-03-02 19:07:46] 2026-03-02 18:07:46,657 [wrapper] apfmon messages muted
[2026-03-02 19:07:46] 2026-03-02 18:07:46,660 [wrapper] ==== wrapper stdout END ====
[2026-03-02 19:07:46] 2026-03-02 18:07:46,663 [wrapper] ==== wrapper stderr END ====
[2026-03-02 19:07:46]  *** Error codes and diagnostics ***
[2026-03-02 19:07:46]     "exeErrorCode": 0,
[2026-03-02 19:07:46]     "exeErrorDiag": "",
[2026-03-02 19:07:46]     "pilotErrorCode": 0,
[2026-03-02 19:07:46]     "pilotErrorDiag": "",
[2026-03-02 19:07:46]  *** Listing of results directory ***
[2026-03-02 19:07:46] total 509020
[2026-03-02 19:07:46] -rw-r--r-- 1 boinc boinc    584627 Mar  2 11:57 pilot3.tar.gz
[2026-03-02 19:07:46] -rwx------ 1 boinc boinc     36322 Mar  2 12:00 runpilot2-wrapper.sh
[2026-03-02 19:07:46] -rw-r--r-- 1 boinc boinc      5111 Mar  2 12:02 queuedata.json
[2026-03-02 19:07:46] -rw-r--r-- 1 boinc boinc       100 Mar  2 17:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 19:07:46] -rwxr-xr-x 1 boinc boinc      7986 Mar  2 17:26 run_atlas
[2026-03-02 19:07:46] -rw-r--r-- 1 boinc boinc       105 Mar  2 17:26 job.xml
[2026-03-02 19:07:46] -rw-r--r-- 2 boinc boinc 286808438 Mar  2 17:26 EVNT.48220101._000243.pool.root.1
[2026-03-02 19:07:46] -rw-r--r-- 2 boinc boinc    597973 Mar  2 17:26 input.tar.gz
[2026-03-02 19:07:46] -rw-r--r-- 2 boinc boinc     15845 Mar  2 17:26 start_atlas.sh
[2026-03-02 19:07:46] drwxrwx--x 2 boinc boinc      4096 Mar  2 17:26 shared
[2026-03-02 19:07:46] -rw-r--r-- 1 boinc boinc         0 Mar  2 17:26 boinc_setup_complete
[2026-03-02 19:07:46] -rw-r--r-- 1 boinc boinc      6445 Mar  2 17:26 init_data.xml
[2026-03-02 19:07:46] -rw-r--r-- 1 boinc boinc         0 Mar  2 17:26 boinc_lockfile
[2026-03-02 19:07:46] -rw-r--r-- 1 boinc boinc      2580 Mar  2 17:26 pandaJob.out
[2026-03-02 19:07:46] -rw------- 1 boinc boinc    998105 Mar  2 17:26 agis_schedconf.cvmfs.json
[2026-03-02 19:07:46] -rw------- 1 boinc boinc   1512931 Mar  2 17:26 agis_ddmendpoints.agis.ALL.json
[2026-03-02 19:07:46] -rw------- 1 boinc boinc       425 Mar  2 17:26 workernode_map.json
[2026-03-02 19:07:46] drwx------ 5 boinc boinc      4096 Mar  2 17:26 pilot3
[2026-03-02 19:07:46] -rw-r--r-- 1 boinc boinc       529 Mar  2 19:06 boinc_task_state.xml
[2026-03-02 19:07:46] -rw------- 1 boinc boinc 228255384 Mar  2 19:06 HITS.48838432._006412.pool.root.1
[2026-03-02 19:07:46] -rw------- 1 boinc boinc      1011 Mar  2 19:06 memory_monitor_summary.json
[2026-03-02 19:07:46] -rw------- 1 boinc boinc    260847 Mar  2 19:06 log.48838432._006412.job.log.tgz.1
[2026-03-02 19:07:46] -rw------- 1 boinc boinc      6299 Mar  2 19:06 heartbeat.json
[2026-03-02 19:07:46] -rw------- 1 boinc boinc        95 Mar  2 19:07 pilot_heartbeat.json
[2026-03-02 19:07:46] -rw-r--r-- 1 boinc boinc      8192 Mar  2 19:07 boinc_mmap_file
[2026-03-02 19:07:46] -rw-r--r-- 1 boinc boinc        27 Mar  2 19:07 wrapper_checkpoint.txt
[2026-03-02 19:07:46] -rw------- 1 boinc boinc      5005 Mar  2 19:07 pilotlog.txt
[2026-03-02 19:07:46] -rw------- 1 boinc boinc    872192 Mar  2 19:07 log.48838432._006412.job.log.1
[2026-03-02 19:07:46] -rw------- 1 boinc boinc       357 Mar  2 19:07 output.list
[2026-03-02 19:07:46] -rw-r--r-- 1 boinc boinc       620 Mar  2 19:07 runtime_log
[2026-03-02 19:07:46] -rw------- 1 boinc boinc   1146880 Mar  2 19:07 result.tar.gz
[2026-03-02 19:07:46] -rw-r--r-- 1 boinc boinc      8911 Mar  2 19:07 runtime_log.err
[2026-03-02 19:07:46] -rw------- 1 boinc boinc       660 Mar  2 19:07 BjXKDm3BGH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSHDLDmSxcIFo.diag
[2026-03-02 19:07:46] -rw-r--r-- 1 boinc boinc      6794 Mar  2 19:07 stderr.txt
[2026-03-02 19:07:46] HITS file was successfully produced:
[2026-03-02 19:07:46] -rw------- 1 boinc boinc 228255384 Mar  2 19:06 shared/HITS.pool.root.1
[2026-03-02 19:07:46]  *** Contents of shared directory: ***
[2026-03-02 19:07:46] total 504724
[2026-03-02 19:07:46] -rw-r--r-- 2 boinc boinc 286808438 Mar  2 17:26 ATLAS.root_0
[2026-03-02 19:07:46] -rw-r--r-- 2 boinc boinc    597973 Mar  2 17:26 input.tar.gz
[2026-03-02 19:07:46] -rw-r--r-- 2 boinc boinc     15845 Mar  2 17:26 start_atlas.sh
[2026-03-02 19:07:46] -rw------- 1 boinc boinc 228255384 Mar  2 19:06 HITS.pool.root.1
[2026-03-02 19:07:46] -rw------- 1 boinc boinc   1146880 Mar  2 19:07 result.tar.gz
19:07:48 (788401): run_atlas exited; CPU time 17310.096462
19:07:48 (788401): called boinc_finish(0)

</stderr_txt>
]]>

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