Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:04:08 (1786494): wrapper (7.7.26015): starting
05:04:08 (1786494): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 05:04:08] Arguments: --nthreads 4
[2026-03-05 05:04:08] Threads: 4
[2026-03-05 05:04:08] Checking for CVMFS
[2026-03-05 05:04:08] No cvmfs_config command found, will try listing directly
[2026-03-05 05:04:08] CVMFS is ok
[2026-03-05 05:04:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 05:04:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 05:04:08] Further information can be found at the LHC@home message board.
[2026-03-05 05:04:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 05:04:08] Checking for apptainer binary...
[2026-03-05 05:04:08] which: no apptainer in ((null))
[2026-03-05 05:04:08] apptainer is not installed, using version from CVMFS
[2026-03-05 05:04:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 05:04:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot256/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-05 05:04:09] apptainer works
[2026-03-05 05:04:09] Set ATHENA_PROC_NUMBER=4
[2026-03-05 05:04:09] Set ATHENA_CORE_NUMBER=4
[2026-03-05 05:04:09] Starting ATLAS job with PandaID=7035912204
[2026-03-05 05:04:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot256/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 08:10:46]  *** The last 200 lines of the pilot log: ***
[2026-03-05 08:10:46] 2026-03-05 07:10:01,264 | INFO     | using path: /var/lib/boinc/var/slot256/slots/0/PanDA_Pilot-7035912204/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 08:10:46] 2026-03-05 07:10:01,264 | INFO     | extracted standard info from prmon json
[2026-03-05 08:10:46] 2026-03-05 07:10:01,264 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 08:10:46] 2026-03-05 07:10:01,264 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 08:10:46] 2026-03-05 07:10:01,264 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 08:10:46] 2026-03-05 07:10:01,264 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 08:10:46] 2026-03-05 07:10:01,266 | INFO     | fitting pss+swap vs Time
[2026-03-05 08:10:46] 2026-03-05 07:10:01,267 | INFO     | sum of square deviations: 1900284932.0
[2026-03-05 08:10:46] 2026-03-05 07:10:01,267 | INFO     | sum of deviations: 12722289076.0
[2026-03-05 08:10:46] 2026-03-05 07:10:01,267 | INFO     | mean x: 1772689033.0
[2026-03-05 08:10:46] 2026-03-05 07:10:01,267 | INFO     | mean y: 2332952.180327869
[2026-03-05 08:10:46] 2026-03-05 07:10:01,267 | INFO     | intersect: -11865709539.713148
[2026-03-05 08:10:46] 2026-03-05 07:10:01,267 | INFO     | chi2: 1.8684305101585406
[2026-03-05 08:10:46] 2026-03-05 07:10:01,268 | INFO     | sum of square deviations: 1748737904.5
[2026-03-05 08:10:46] 2026-03-05 07:10:01,268 | INFO     | sum of deviations: 23428952986.499996
[2026-03-05 08:10:46] 2026-03-05 07:10:01,268 | INFO     | mean x: 1772688880.5
[2026-03-05 08:10:46] 2026-03-05 07:10:01,268 | INFO     | mean y: 2343473.275280899
[2026-03-05 08:10:46] 2026-03-05 07:10:01,268 | INFO     | intersect: -23747495958.95269
[2026-03-05 08:10:46] 2026-03-05 07:10:01,268 | INFO     | chi2: 1.1038225002843884
[2026-03-05 08:10:46] 2026-03-05 07:10:01,269 | INFO     | current chi2=1.1038225002843884 (change=40.922475078255566 %)
[2026-03-05 08:10:46] 2026-03-05 07:10:01,269 | INFO     | sum of square deviations: 1605470102.0
[2026-03-05 08:10:46] 2026-03-05 07:10:01,269 | INFO     | sum of deviations: 22599971252.0
[2026-03-05 08:10:46] 2026-03-05 07:10:01,269 | INFO     | mean x: 1772688728.0
[2026-03-05 08:10:46] 2026-03-05 07:10:01,269 | INFO     | mean y: 2342590.6589595377
[2026-03-05 08:10:46] 2026-03-05 07:10:01,269 | INFO     | intersect: -24951541160.67137
[2026-03-05 08:10:46] 2026-03-05 07:10:01,269 | INFO     | chi2: 1.104333336024464
[2026-03-05 08:10:46] 2026-03-05 07:10:01,269 | INFO     | current chi2=1.104333336024464 (change=-0.04627879391333187 %)
[2026-03-05 08:10:46] 2026-03-05 07:10:01,269 | INFO     | right removable region: 172
[2026-03-05 08:10:46] 2026-03-05 07:10:01,270 | INFO     | sum of square deviations: 1748737904.5
[2026-03-05 08:10:46] 2026-03-05 07:10:01,270 | INFO     | sum of deviations: -5782782859.0
[2026-03-05 08:10:46] 2026-03-05 07:10:01,270 | INFO     | mean x: 1772689185.5
[2026-03-05 08:10:46] 2026-03-05 07:10:01,270 | INFO     | mean y: 2351264.393258427
[2026-03-05 08:10:46] 2026-03-05 07:10:01,270 | INFO     | intersect: 5864336991.279566
[2026-03-05 08:10:46] 2026-03-05 07:10:01,270 | INFO     | chi2: 0.7826344757502317
[2026-03-05 08:10:46] 2026-03-05 07:10:01,270 | INFO     | current chi2=0.7826344757502317 (change=58.112733040105226 %)
[2026-03-05 08:10:46] 2026-03-05 07:10:01,271 | INFO     | sum of square deviations: 1605470102.0
[2026-03-05 08:10:46] 2026-03-05 07:10:01,271 | INFO     | sum of deviations: -6470837056.0
[2026-03-05 08:10:46] 2026-03-05 07:10:01,271 | INFO     | mean x: 1772689338.0
[2026-03-05 08:10:46] 2026-03-05 07:10:01,271 | INFO     | mean y: 2351992.3063583816
[2026-03-05 08:10:46] 2026-03-05 07:10:01,271 | INFO     | intersect: 7147165117.643842
[2026-03-05 08:10:46] 2026-03-05 07:10:01,271 | INFO     | chi2: 0.7823588999727983
[2026-03-05 08:10:46] 2026-03-05 07:10:01,271 | INFO     | current chi2=0.7823588999727983 (change=0.035211300546050824 %)
[2026-03-05 08:10:46] 2026-03-05 07:10:01,271 | INFO     | left removable region: 20
[2026-03-05 08:10:46] 2026-03-05 07:10:01,271 | INFO     | sum of square deviations: 1088905998.0
[2026-03-05 08:10:46] 2026-03-05 07:10:01,272 | INFO     | sum of deviations: 2986724120.5
[2026-03-05 08:10:46] 2026-03-05 07:10:01,272 | INFO     | mean x: 1772689307.5
[2026-03-05 08:10:46] 2026-03-05 07:10:01,272 | INFO     | mean y: 2364458.8486842103
[2026-03-05 08:10:46] 2026-03-05 07:10:01,272 | INFO     | intersect: -4859886206.1189
[2026-03-05 08:10:46] 2026-03-05 07:10:01,272 | INFO     | chi2: 0.0002240510231530242
[2026-03-05 08:10:46] 2026-03-05 07:10:01,272 | INFO     | current memory leak: 2.74 B/s (using 152 data points, chi2=0.00)
[2026-03-05 08:10:46] 2026-03-05 07:10:01,272 | INFO     | could have reported an average CPU frequency of 3598 MHz (10 samples)
[2026-03-05 08:10:46] 2026-03-05 07:10:01,273 | INFO     | ..............................
[2026-03-05 08:10:46] 2026-03-05 07:10:01,273 | INFO     | . Timing measurements:
[2026-03-05 08:10:46] 2026-03-05 07:10:01,273 | INFO     | . get job = 0 s
[2026-03-05 08:10:46] 2026-03-05 07:10:01,273 | INFO     | . initial setup = 5 s
[2026-03-05 08:10:46] 2026-03-05 07:10:01,273 | INFO     | . payload setup = 5 s
[2026-03-05 08:10:46] 2026-03-05 07:10:01,273 | INFO     | . stage-in = 0 s
[2026-03-05 08:10:46] 2026-03-05 07:10:01,273 | INFO     | . payload execution = 11118 s
[2026-03-05 08:10:46] 2026-03-05 07:10:01,273 | INFO     | . stage-out = 1 s
[2026-03-05 08:10:46] 2026-03-05 07:10:01,273 | INFO     | . log creation = 0 s
[2026-03-05 08:10:46] 2026-03-05 07:10:01,273 | INFO     | ..............................
[2026-03-05 08:10:46] 2026-03-05 07:10:01,545 | INFO     | time since job start (11140s) is within the limit (349056.0s)
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | 
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | job summary report
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | --------------------------------------------------
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | PanDA job id: 7035912204
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | task id: 48845852
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | errors: (none)
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | pilot state: finished 
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | transexitcode: 0
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | exeerrorcode: 0
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | exeerrordiag: 
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | exitcode: 0
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | exitmsg: OK
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | cpuconsumptiontime: 43112 s
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | nevents: 400
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | neventsw: 0
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | pid: 1797130
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | pgrp: 1797130
[2026-03-05 08:10:46] 2026-03-05 07:10:01,808 | INFO     | corecount: 4
[2026-03-05 08:10:46] 2026-03-05 07:10:01,809 | INFO     | event service: False
[2026-03-05 08:10:46] 2026-03-05 07:10:01,809 | INFO     | sizes: {0: 2295443, 1: 2295904, 11: 2295904, 11128: 2325168, 11129: 2334384}
[2026-03-05 08:10:46] 2026-03-05 07:10:01,809 | INFO     | --------------------------------------------------
[2026-03-05 08:10:46] 2026-03-05 07:10:01,809 | INFO     | 
[2026-03-05 08:10:46] 2026-03-05 07:10:01,809 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot256/slots/0
[2026-03-05 08:10:46] 2026-03-05 07:10:01,829 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,829 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,829 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,829 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | job 7035912204 has completed (purged errors)
[2026-03-05 08:10:46] 2026-03-05 07:10:01,830 | INFO     | overall cleanup function is called
[2026-03-05 08:10:46] 2026-03-05 07:10:02,837 | INFO     | --- collectZombieJob: --- 10, [1797130]
[2026-03-05 08:10:46] 2026-03-05 07:10:02,837 | INFO     | zombie collector waiting for pid 1797130
[2026-03-05 08:10:46] 2026-03-05 07:10:02,837 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 08:10:46] 2026-03-05 07:10:02,837 | INFO     | collected zombie processes
[2026-03-05 08:10:46] 2026-03-05 07:10:02,837 | INFO     | will attempt to kill all subprocesses of pid=1797130
[2026-03-05 08:10:46] 2026-03-05 07:10:03,205 | INFO     | process IDs to be killed: [1797130] (in reverse order)
[2026-03-05 08:10:46] 2026-03-05 07:10:03,416 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 08:10:46] 2026-03-05 07:10:03,416 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 08:10:46] 2026-03-05 07:10:03,447 | INFO     | did not find any defunct processes belonging to 1797130
[2026-03-05 08:10:46] 2026-03-05 07:10:03,477 | INFO     | did not find any defunct processes belonging to 1797130
[2026-03-05 08:10:46] 2026-03-05 07:10:03,477 | INFO     | ready for new job
[2026-03-05 08:10:46] 2026-03-05 07:10:03,477 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 08:10:46] 2026-03-05 07:10:03,478 | INFO     | **************************************
[2026-03-05 08:10:46] 2026-03-05 07:10:03,479 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 08:10:46] 2026-03-05 07:10:03,479 | INFO     | **************************************
[2026-03-05 08:10:46] 2026-03-05 07:10:03,479 | INFO     | 
[2026-03-05 08:10:46] 2026-03-05 07:10:03,484 | INFO     | architecture information:
[2026-03-05 08:10:46] 2026-03-05 07:10:03,485 | INFO     | executing command: cat /etc/os-release
[2026-03-05 08:10:46] 2026-03-05 07:10:03,496 | INFO     | cat /etc/os-release:
[2026-03-05 08:10:46] NAME="CentOS Linux"
[2026-03-05 08:10:46] VERSION="7 (Core)"
[2026-03-05 08:10:46] ID="centos"
[2026-03-05 08:10:46] ID_LIKE="rhel fedora"
[2026-03-05 08:10:46] VERSION_ID="7"
[2026-03-05 08:10:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 08:10:46] ANSI_COLOR="0;31"
[2026-03-05 08:10:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 08:10:46] HOME_URL="https://www.centos.org/"
[2026-03-05 08:10:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 08:10:46] 
[2026-03-05 08:10:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 08:10:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 08:10:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 08:10:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 08:10:46] 
[2026-03-05 08:10:46] 2026-03-05 07:10:03,497 | INFO     | **************************************
[2026-03-05 08:10:46] 2026-03-05 07:10:03,999 | INFO     | executing command: df -mP /var/lib/boinc/var/slot256/slots/0
[2026-03-05 08:10:46] 2026-03-05 07:10:04,012 | INFO     | sufficient remaining disk space (20373831680 B)
[2026-03-05 08:10:46] 2026-03-05 07:10:04,012 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 08:10:46] 2026-03-05 07:10:04,012 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 08:10:46] 2026-03-05 07:10:04,013 | INFO     | update_server=False
[2026-03-05 08:10:46] 2026-03-05 07:10:04,013 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 08:10:46] 2026-03-05 07:10:04,084 | INFO     | all data control threads have been joined
[2026-03-05 08:10:46] 2026-03-05 07:10:04,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 08:10:46] 2026-03-05 07:10:04,505 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-05 08:10:46] 2026-03-05 07:10:04,505 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-05 08:10:46] 2026-03-05 07:10:04,505 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 08:10:46] 2026-03-05 07:10:04,505 | INFO     | will abort loop
[2026-03-05 08:10:46] 2026-03-05 07:10:04,643 | INFO     | all job control threads have been joined
[2026-03-05 08:10:46] 2026-03-05 07:10:04,897 | INFO     | all payload control threads have been joined
[2026-03-05 08:10:46] 2026-03-05 07:10:05,018 | INFO     | [job] retrieve thread has finished
[2026-03-05 08:10:46] 2026-03-05 07:10:05,091 | INFO     | [data] control thread has finished
[2026-03-05 08:10:46] 2026-03-05 07:10:05,391 | INFO     | [payload] failed_post thread has finished
[2026-03-05 08:10:46] 2026-03-05 07:10:05,422 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 08:10:46] 2026-03-05 07:10:05,510 | INFO     | [job] job monitor thread has finished
[2026-03-05 08:10:46] 2026-03-05 07:10:05,649 | INFO     | [job] control thread has finished
[2026-03-05 08:10:46] 2026-03-05 07:10:05,716 | INFO     | [job] validate thread has finished
[2026-03-05 08:10:46] 2026-03-05 07:10:05,737 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 08:10:46] 2026-03-05 07:10:05,887 | INFO     | [payload] validate_post thread has finished
[2026-03-05 08:10:46] 2026-03-05 07:10:05,902 | INFO     | [payload] control thread has finished
[2026-03-05 08:10:46] 2026-03-05 07:10:06,153 | INFO     | [data] copytool_in thread has finished
[2026-03-05 08:10:46] 2026-03-05 07:10:06,183 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 08:10:46] 2026-03-05 07:10:06,207 | INFO     | [data] copytool_out thread has finished
[2026-03-05 08:10:46] 2026-03-05 07:10:06,332 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 08:10:46] 2026-03-05 07:10:07,255 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 08:10:46] 2026-03-05 07:10:07,337 | INFO     | [job] queue monitor thread has finished
[2026-03-05 08:10:46] 2026-03-05 07:10:11,265 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 08:10:46] 2026-03-05 07:10:14,545 | INFO     | job.realtimelogging is not enabled
[2026-03-05 08:10:46] 2026-03-05 07:10:15,555 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 08:10:46] 2026-03-05 07:10:35,168 | INFO     | PID=1791053 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 08:10:46] 2026-03-05 07:10:35,168 | INFO     | .. there are 48 such processes running
[2026-03-05 08:10:46] 2026-03-05 07:10:35,168 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 08:10:46] 2026-03-05 07:10:35,168 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 08:10:46] 2026-03-05 07:10:35,168 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 08:10:46] 2026-03-05 07:10:39,689 | INFO     | [monitor] cgroup control has ended
[2026-03-05 08:10:46] 2026-03-05 07:10:41,381 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23161057920832)>', '<ExcThread(monitor, started 23160820086528)>']
[2026-03-05 08:10:46] 2026-03-05 07:10:42,208 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 08:10:46] 2026-03-05 07:10:42,209 | INFO     | [monitor] control thread has ended
[2026-03-05 08:10:46] 2026-03-05 07:10:46,413 | INFO     | all workflow threads have been joined
[2026-03-05 08:10:46] 2026-03-05 07:10:46,413 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 08:10:46] 2026-03-05 07:10:46,413 | INFO     | traces error code: 0
[2026-03-05 08:10:46] 2026-03-05 07:10:46,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 08:10:46] 2026-03-05 07:10:46,566 [wrapper] ==== pilot stdout END ====
[2026-03-05 08:10:46] 2026-03-05 07:10:46,569 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 08:10:46] 2026-03-05 07:10:46,572 [wrapper] pilotpid: 1791053
[2026-03-05 08:10:46] 2026-03-05 07:10:46,574 [wrapper] Pilot exit status: 0
[2026-03-05 08:10:46] 2026-03-05 07:10:46,581 [wrapper] pandaids: 7035912204
[2026-03-05 08:10:46] 2026-03-05 07:10:46,715 [wrapper] cleanup supervisor_pilot 3347785 1791054
[2026-03-05 08:10:46] 2026-03-05 07:10:46,718 [wrapper] Test setup, not cleaning
[2026-03-05 08:10:46] 2026-03-05 07:10:46,720 [wrapper] apfmon messages muted
[2026-03-05 08:10:46] 2026-03-05 07:10:46,723 [wrapper] ==== wrapper stdout END ====
[2026-03-05 08:10:46] 2026-03-05 07:10:46,725 [wrapper] ==== wrapper stderr END ====
[2026-03-05 08:10:46]  *** Error codes and diagnostics ***
[2026-03-05 08:10:46]     "exeErrorCode": 0,
[2026-03-05 08:10:46]     "exeErrorDiag": "",
[2026-03-05 08:10:46]     "pilotErrorCode": 0,
[2026-03-05 08:10:46]     "pilotErrorDiag": "",
[2026-03-05 08:10:46]  *** Listing of results directory ***
[2026-03-05 08:10:46] total 598436
[2026-03-05 08:10:46] -rw-r--r--. 1 boinc boinc    584627 Mar  2 10:36 pilot3.tar.gz
[2026-03-05 08:10:46] -rw-r--r--. 1 boinc boinc      5111 Mar  2 10:38 queuedata.json
[2026-03-05 08:10:46] -rwx------. 1 boinc boinc     36322 Mar  2 10:38 runpilot2-wrapper.sh
[2026-03-05 08:10:46] -rw-r--r--. 1 boinc boinc       100 Mar  5 05:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 08:10:46] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 05:04 run_atlas
[2026-03-05 08:10:46] -rw-r--r--. 1 boinc boinc       105 Mar  5 05:04 job.xml
[2026-03-05 08:10:46] -rw-r--r--. 2 boinc boinc 307499878 Mar  5 05:04 EVNT.48450800._000001.pool.root.1
[2026-03-05 08:10:46] -rw-r--r--. 2 boinc boinc     15845 Mar  5 05:04 start_atlas.sh
[2026-03-05 08:10:46] drwxrwx--x. 2 boinc boinc      4096 Mar  5 05:04 shared
[2026-03-05 08:10:46] -rw-r--r--. 2 boinc boinc    597957 Mar  5 05:04 input.tar.gz
[2026-03-05 08:10:46] -rw-r--r--. 1 boinc boinc      6709 Mar  5 05:04 init_data.xml
[2026-03-05 08:10:46] -rw-r--r--. 1 boinc boinc         0 Mar  5 05:04 boinc_lockfile
[2026-03-05 08:10:46] -rw-r--r--. 1 boinc boinc      2605 Mar  5 05:04 pandaJob.out
[2026-03-05 08:10:46] -rw-------. 1 boinc boinc    997757 Mar  5 05:04 agis_schedconf.cvmfs.json
[2026-03-05 08:10:46] -rw-------. 1 boinc boinc       445 Mar  5 05:04 workernode_map.json
[2026-03-05 08:10:46] drwx------. 5 boinc boinc      4096 Mar  5 05:04 pilot3
[2026-03-05 08:10:46] -rw-------. 1 boinc boinc 297499615 Mar  5 08:09 HITS.48845852._000012.pool.root.1
[2026-03-05 08:10:46] -rw-r--r--. 1 boinc boinc       530 Mar  5 08:09 boinc_task_state.xml
[2026-03-05 08:10:46] -rw-------. 1 boinc boinc        95 Mar  5 08:09 pilot_heartbeat.json
[2026-03-05 08:10:46] -rw-------. 1 boinc boinc      1031 Mar  5 08:09 memory_monitor_summary.json
[2026-03-05 08:10:46] -rw-------. 1 boinc boinc   1521291 Mar  5 08:10 agis_ddmendpoints.agis.ALL.json
[2026-03-05 08:10:46] -rw-------. 1 boinc boinc    361185 Mar  5 08:10 log.48845852._000012.job.log.tgz.1
[2026-03-05 08:10:46] -rw-------. 1 boinc boinc      6349 Mar  5 08:10 heartbeat.json
[2026-03-05 08:10:46] -rw-r--r--. 1 boinc boinc        28 Mar  5 08:10 wrapper_checkpoint.txt
[2026-03-05 08:10:46] -rw-r--r--. 1 boinc boinc      8192 Mar  5 08:10 boinc_mmap_file
[2026-03-05 08:10:46] -rw-------. 1 boinc boinc      5088 Mar  5 08:10 pilotlog.txt
[2026-03-05 08:10:46] -rw-------. 1 boinc boinc   1571425 Mar  5 08:10 log.48845852._000012.job.log.1
[2026-03-05 08:10:46] -rw-------. 1 boinc boinc       357 Mar  5 08:10 output.list
[2026-03-05 08:10:46] -rw-r--r--. 1 boinc boinc       620 Mar  5 08:10 runtime_log
[2026-03-05 08:10:46] -rw-------. 1 boinc boinc   1945600 Mar  5 08:10 result.tar.gz
[2026-03-05 08:10:46] -rw-r--r--. 1 boinc boinc      9222 Mar  5 08:10 runtime_log.err
[2026-03-05 08:10:46] -rw-------. 1 boinc boinc       665 Mar  5 08:10 QwqLDmZuEH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmR5ALDmAUXHKo.diag
[2026-03-05 08:10:46] -rw-r--r--. 1 boinc boinc     20806 Mar  5 08:10 stderr.txt
[2026-03-05 08:10:46] HITS file was successfully produced:
[2026-03-05 08:10:46] -rw-------. 1 boinc boinc 297499615 Mar  5 08:09 shared/HITS.pool.root.1
[2026-03-05 08:10:46]  *** Contents of shared directory: ***
[2026-03-05 08:10:46] total 593332
[2026-03-05 08:10:46] -rw-r--r--. 2 boinc boinc 307499878 Mar  5 05:04 ATLAS.root_0
[2026-03-05 08:10:46] -rw-r--r--. 2 boinc boinc     15845 Mar  5 05:04 start_atlas.sh
[2026-03-05 08:10:46] -rw-r--r--. 2 boinc boinc    597957 Mar  5 05:04 input.tar.gz
[2026-03-05 08:10:46] -rw-------. 1 boinc boinc 297499615 Mar  5 08:09 HITS.pool.root.1
[2026-03-05 08:10:46] -rw-------. 1 boinc boinc   1945600 Mar  5 08:10 result.tar.gz
08:10:48 (1786494): run_atlas exited; CPU time 43653.740348
08:10:48 (1786494): called boinc_finish(0)

</stderr_txt>
]]>

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