Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:43:50 (29939): wrapper (7.7.26015): starting
17:43:50 (29939): wrapper: running run_atlas (--nthreads 8)
[2026-03-02 17:43:50] Arguments: --nthreads 8
[2026-03-02 17:43:50] Threads: 8
[2026-03-02 17:43:50] Checking for CVMFS
[2026-03-02 17:43:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 17:43:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 17:43:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 17:43:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 17:43:50] 2.11.0.0 3945 127167 68784 156813 0 188 3535870 4096000 908 130560 1 3101840 99.286 5614012 343 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-02 17:43:50] CVMFS is ok
[2026-03-02 17:43:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 17:43:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 17:43:50] Further information can be found at the LHC@home message board.
[2026-03-02 17:43:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 17:43:50] Checking for apptainer binary...
[2026-03-02 17:43:50] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-02 17:43:50] apptainer is not installed, using version from CVMFS
[2026-03-02 17:43:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 17:43:50] WARNING: Environment variable TMPDIR already has value [/tmp/job_11241882/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node251
[2026-03-02 17:43:50] apptainer works
[2026-03-02 17:43:50] Set ATHENA_PROC_NUMBER=8
[2026-03-02 17:43:50] Set ATHENA_CORE_NUMBER=8
[2026-03-02 17:43:50] Starting ATLAS job with PandaID=7035864188
[2026-03-02 17:43:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11241882/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 18:39:32]  *** The last 200 lines of the pilot log: ***
[2026-03-02 18:39:32]  guid=204bd123-4545-4319-bac9-238e66c1ca4c
[2026-03-02 18:39:32]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-02 18:39:32]  is_altstaged=None
[2026-03-02 18:39:32]  is_tar=False
[2026-03-02 18:39:32]  lfn=log.48838521._002396.job.log.tgz.1
[2026-03-02 18:39:32]  mtime=0
[2026-03-02 18:39:32]  protocol_id=None
[2026-03-02 18:39:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-02 18:39:32]  replicas=None
[2026-03-02 18:39:32]  scope=mc23_13p6TeV
[2026-03-02 18:39:32]  status=None
[2026-03-02 18:39:32]  status_code=0
[2026-03-02 18:39:32]  storage_token=
[2026-03-02 18:39:32]  surl=/tmp/job_11241882/atlas/pilot/slots/0/PanDA_Pilot-7035864188/log.48838521._002396.job.log.tgz.1
[2026-03-02 18:39:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/fe/log.48838521._002396.job.log.tgz.1
[2026-03-02 18:39:32]  workdir=None
[2026-03-02 18:39:32] ]
[2026-03-02 18:39:32] 2026-03-02 17:38:57,761 | INFO     | transferring file log.48838521._002396.job.log.tgz.1 from /tmp/job_11241882/atlas/pilot/slots/0/PanDA_Pilot-7035864188/log.48838521._002396.job.log.tgz.1 to /tmp/j
[2026-03-02 18:39:32] 2026-03-02 17:38:57,762 | INFO     | executing command: /usr/bin/env mv /tmp/job_11241882/atlas/pilot/slots/0/PanDA_Pilot-7035864188/log.48838521._002396.job.log.tgz.1 /tmp/job_11241882/atlas/pilot/sl
[2026-03-02 18:39:32] 2026-03-02 17:38:57,769 | INFO     | adding to output.list: log.48838521._002396.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/fe/log.48838521._002396.job.log.tg
[2026-03-02 18:39:32] 2026-03-02 17:38:57,769 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-02 18:39:32] 2026-03-02 17:38:57,769 | INFO     | summary of transferred files:
[2026-03-02 18:39:32] 2026-03-02 17:38:57,769 | INFO     |  -- lfn=log.48838521._002396.job.log.tgz.1, status_code=0, status=transferred
[2026-03-02 18:39:32] 2026-03-02 17:38:57,769 | INFO     | stage-out finished correctly
[2026-03-02 18:39:32] 2026-03-02 17:38:59,389 | INFO     | time since job start (3300s) is within the limit (349056.0s)
[2026-03-02 18:39:32] 2026-03-02 17:38:59,500 | WARNING  | process 8540 can no longer be monitored (due to stat problems) - aborting
[2026-03-02 18:39:32] 2026-03-02 17:38:59,501 | INFO     | using path: /tmp/job_11241882/atlas/pilot/slots/0/PanDA_Pilot-7035864188/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 18:39:32] 2026-03-02 17:38:59,614 | INFO     | number of running child processes to parent process 8540: 1
[2026-03-02 18:39:32] 2026-03-02 17:38:59,614 | INFO     | maximum number of monitored processes: 6
[2026-03-02 18:39:32] 2026-03-02 17:39:00,860 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-02 18:39:32] 2026-03-02 17:39:01,225 | INFO     | job 7035864188 has state=finished
[2026-03-02 18:39:32] 2026-03-02 17:39:01,225 | INFO     | preparing for final server update for job 7035864188 in state='finished'
[2026-03-02 18:39:32] 2026-03-02 17:39:01,225 | INFO     | reading metadata from: /tmp/job_11241882/atlas/pilot/slots/0/PanDA_Pilot-7035864188/jobReport.json
[2026-03-02 18:39:32] 2026-03-02 17:39:01,226 | INFO     | added worker_node to metadata from /tmp/job_11241882/atlas/pilot/slots/0/workernode_map.json
[2026-03-02 18:39:32] 2026-03-02 17:39:01,227 | INFO     | this job has now completed (state=finished)
[2026-03-02 18:39:32] 2026-03-02 17:39:01,227 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-02 18:39:32] 2026-03-02 17:39:01,227 | INFO     | log transfer has been attempted: DONE
[2026-03-02 18:39:32] 2026-03-02 17:39:01,227 | INFO     | job 7035864188 has finished - writing final server update
[2026-03-02 18:39:32] 2026-03-02 17:39:01,227 | INFO     | total number of processed events: 400 (read)
[2026-03-02 18:39:32] 2026-03-02 17:39:01,245 | INFO     | using path: /tmp/job_11241882/atlas/pilot/slots/0/PanDA_Pilot-7035864188/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 18:39:32] 2026-03-02 17:39:01,245 | INFO     | extracted standard info from prmon json
[2026-03-02 18:39:32] 2026-03-02 17:39:01,245 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 18:39:32] 2026-03-02 17:39:01,245 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 18:39:32] 2026-03-02 17:39:01,245 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 18:39:32] 2026-03-02 17:39:01,246 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 18:39:32] 2026-03-02 17:39:01,246 | INFO     | fitting pss+swap vs Time
[2026-03-02 18:39:32] 2026-03-02 17:39:01,246 | INFO     | sum of square deviations: 32179208.0
[2026-03-02 18:39:32] 2026-03-02 17:39:01,246 | INFO     | sum of deviations: -812762596.9999999
[2026-03-02 18:39:32] 2026-03-02 17:39:01,246 | INFO     | mean x: 1772471563.0
[2026-03-02 18:39:32] 2026-03-02 17:39:01,246 | INFO     | mean y: 2568204.5319148935
[2026-03-02 18:39:32] 2026-03-02 17:39:01,247 | INFO     | intersect: 44770562204.02776
[2026-03-02 18:39:32] 2026-03-02 17:39:01,247 | INFO     | chi2: 0.0013900414707570853
[2026-03-02 18:39:32] 2026-03-02 17:39:01,247 | INFO     | current memory leak: -25.26 B/s (using 47 data points, chi2=0.00)
[2026-03-02 18:39:32] 2026-03-02 17:39:01,247 | INFO     | could have reported an average CPU frequency of 2481 MHz (5 samples)
[2026-03-02 18:39:32] 2026-03-02 17:39:01,247 | INFO     | ..............................
[2026-03-02 18:39:32] 2026-03-02 17:39:01,247 | INFO     | . Timing measurements:
[2026-03-02 18:39:32] 2026-03-02 17:39:01,247 | INFO     | . get job = 0 s
[2026-03-02 18:39:32] 2026-03-02 17:39:01,247 | INFO     | . initial setup = 2 s
[2026-03-02 18:39:32] 2026-03-02 17:39:01,247 | INFO     | . payload setup = 2 s
[2026-03-02 18:39:32] 2026-03-02 17:39:01,247 | INFO     | . stage-in = 0 s
[2026-03-02 18:39:32] 2026-03-02 17:39:01,247 | INFO     | . payload execution = 3280 s
[2026-03-02 18:39:32] 2026-03-02 17:39:01,247 | INFO     | . stage-out = 0 s
[2026-03-02 18:39:32] 2026-03-02 17:39:01,247 | INFO     | . log creation = 0 s
[2026-03-02 18:39:32] 2026-03-02 17:39:01,247 | INFO     | ..............................
[2026-03-02 18:39:32] 2026-03-02 17:39:01,338 | INFO     | 
[2026-03-02 18:39:32] 2026-03-02 17:39:01,338 | INFO     | job summary report
[2026-03-02 18:39:32] 2026-03-02 17:39:01,338 | INFO     | --------------------------------------------------
[2026-03-02 18:39:32] 2026-03-02 17:39:01,338 | INFO     | PanDA job id: 7035864188
[2026-03-02 18:39:32] 2026-03-02 17:39:01,338 | INFO     | task id: 48838521
[2026-03-02 18:39:32] 2026-03-02 17:39:01,338 | INFO     | errors: (none)
[2026-03-02 18:39:32] 2026-03-02 17:39:01,338 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 18:39:32] 2026-03-02 17:39:01,338 | INFO     | pilot state: finished 
[2026-03-02 18:39:32] 2026-03-02 17:39:01,338 | INFO     | transexitcode: 0
[2026-03-02 18:39:32] 2026-03-02 17:39:01,338 | INFO     | exeerrorcode: 0
[2026-03-02 18:39:32] 2026-03-02 17:39:01,338 | INFO     | exeerrordiag: 
[2026-03-02 18:39:32] 2026-03-02 17:39:01,338 | INFO     | exitcode: 0
[2026-03-02 18:39:32] 2026-03-02 17:39:01,338 | INFO     | exitmsg: OK
[2026-03-02 18:39:32] 2026-03-02 17:39:01,338 | INFO     | cpuconsumptiontime: 23848 s
[2026-03-02 18:39:32] 2026-03-02 17:39:01,338 | INFO     | nevents: 400
[2026-03-02 18:39:32] 2026-03-02 17:39:01,338 | INFO     | neventsw: 0
[2026-03-02 18:39:32] 2026-03-02 17:39:01,339 | INFO     | pid: 8540
[2026-03-02 18:39:32] 2026-03-02 17:39:01,339 | INFO     | pgrp: 8540
[2026-03-02 18:39:32] 2026-03-02 17:39:01,339 | INFO     | corecount: 8
[2026-03-02 18:39:32] 2026-03-02 17:39:01,339 | INFO     | event service: False
[2026-03-02 18:39:32] 2026-03-02 17:39:01,339 | INFO     | sizes: {0: 2281184, 1: 2282428, 11: 2282428, 3286: 2308032, 3288: 2317060, 3291: 2317470}
[2026-03-02 18:39:32] 2026-03-02 17:39:01,339 | INFO     | --------------------------------------------------
[2026-03-02 18:39:32] 2026-03-02 17:39:01,339 | INFO     | 
[2026-03-02 18:39:32] 2026-03-02 17:39:01,339 | INFO     | executing command: ls -lF /tmp/job_11241882/atlas/pilot/slots/0
[2026-03-02 18:39:32] 2026-03-02 17:39:01,348 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,348 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,348 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,348 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,348 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,348 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,348 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,348 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,348 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,348 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,348 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,348 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,348 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,348 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,348 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,348 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,349 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 18:39:32] 2026-03-02 17:39:01,349 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,349 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 18:39:32] 2026-03-02 17:39:01,349 | INFO     | job 7035864188 has completed (purged errors)
[2026-03-02 18:39:32] 2026-03-02 17:39:01,349 | INFO     | overall cleanup function is called
[2026-03-02 18:39:32] 2026-03-02 17:39:02,355 | INFO     | --- collectZombieJob: --- 10, [8540]
[2026-03-02 18:39:32] 2026-03-02 17:39:02,355 | INFO     | zombie collector waiting for pid 8540
[2026-03-02 18:39:32] 2026-03-02 17:39:02,355 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 18:39:32] 2026-03-02 17:39:02,355 | INFO     | collected zombie processes
[2026-03-02 18:39:32] 2026-03-02 17:39:02,355 | INFO     | will attempt to kill all subprocesses of pid=8540
[2026-03-02 18:39:32] 2026-03-02 17:39:02,470 | INFO     | process IDs to be killed: [8540] (in reverse order)
[2026-03-02 18:39:32] 2026-03-02 17:39:02,509 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 18:39:32] 2026-03-02 17:39:02,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 18:39:32] 2026-03-02 17:39:02,515 | INFO     | did not find any defunct processes belonging to 8540
[2026-03-02 18:39:32] 2026-03-02 17:39:02,519 | INFO     | did not find any defunct processes belonging to 8540
[2026-03-02 18:39:32] 2026-03-02 17:39:02,519 | INFO     | ready for new job
[2026-03-02 18:39:32] 2026-03-02 17:39:02,519 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 18:39:32] 2026-03-02 17:39:02,520 | INFO     | **************************************
[2026-03-02 18:39:32] 2026-03-02 17:39:02,520 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 18:39:32] 2026-03-02 17:39:02,520 | INFO     | **************************************
[2026-03-02 18:39:32] 2026-03-02 17:39:02,520 | INFO     | 
[2026-03-02 18:39:32] 2026-03-02 17:39:02,535 | INFO     | architecture information:
[2026-03-02 18:39:32] 2026-03-02 17:39:02,535 | INFO     | executing command: cat /etc/os-release
[2026-03-02 18:39:32] 2026-03-02 17:39:02,548 | INFO     | cat /etc/os-release:
[2026-03-02 18:39:32] NAME="CentOS Linux"
[2026-03-02 18:39:32] VERSION="7 (Core)"
[2026-03-02 18:39:32] ID="centos"
[2026-03-02 18:39:32] ID_LIKE="rhel fedora"
[2026-03-02 18:39:32] VERSION_ID="7"
[2026-03-02 18:39:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 18:39:32] ANSI_COLOR="0;31"
[2026-03-02 18:39:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 18:39:32] HOME_URL="https://www.centos.org/"
[2026-03-02 18:39:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 18:39:32] 
[2026-03-02 18:39:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 18:39:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 18:39:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 18:39:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 18:39:32] 
[2026-03-02 18:39:32] 2026-03-02 17:39:02,548 | INFO     | **************************************
[2026-03-02 18:39:32] 2026-03-02 17:39:03,051 | INFO     | executing command: df -mP /tmp/job_11241882/atlas/pilot/slots/0
[2026-03-02 18:39:32] 2026-03-02 17:39:03,058 | INFO     | sufficient remaining disk space (222018142208 B)
[2026-03-02 18:39:32] 2026-03-02 17:39:03,058 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 18:39:32] 2026-03-02 17:39:03,058 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 18:39:32] 2026-03-02 17:39:03,058 | INFO     | update_server=False
[2026-03-02 18:39:32] 2026-03-02 17:39:03,058 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 18:39:32] 2026-03-02 17:39:03,058 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 18:39:32] 2026-03-02 17:39:03,059 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 18:39:32] 2026-03-02 17:39:03,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 18:39:32] 2026-03-02 17:39:03,122 | INFO     | aborting loop
[2026-03-02 18:39:32] 2026-03-02 17:39:03,325 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 18:39:32] 2026-03-02 17:39:03,353 | INFO     | all data control threads have been joined
[2026-03-02 18:39:32] 2026-03-02 17:39:03,795 | INFO     | all payload control threads have been joined
[2026-03-02 18:39:32] 2026-03-02 17:39:03,981 | INFO     | [monitor] cgroup control has ended
[2026-03-02 18:39:32] 2026-03-02 17:39:04,033 | INFO     | all job control threads have been joined
[2026-03-02 18:39:32] 2026-03-02 17:39:04,063 | INFO     | [job] queue monitor thread has finished
[2026-03-02 18:39:32] 2026-03-02 17:39:04,063 | INFO     | [job] retrieve thread has finished
[2026-03-02 18:39:32] 2026-03-02 17:39:04,127 | INFO     | [job] job monitor thread has finished
[2026-03-02 18:39:32] 2026-03-02 17:39:04,358 | INFO     | [data] control thread has finished
[2026-03-02 18:39:32] 2026-03-02 17:39:04,611 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 18:39:32] 2026-03-02 17:39:04,800 | INFO     | [payload] control thread has finished
[2026-03-02 18:39:32] 2026-03-02 17:39:05,038 | INFO     | [job] control thread has finished
[2026-03-02 18:39:32] 2026-03-02 17:39:05,146 | INFO     | [payload] validate_post thread has finished
[2026-03-02 18:39:32] 2026-03-02 17:39:05,159 | INFO     | [job] validate thread has finished
[2026-03-02 18:39:32] 2026-03-02 17:39:05,273 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 18:39:32] 2026-03-02 17:39:05,330 | INFO     | [data] copytool_out thread has finished
[2026-03-02 18:39:32] 2026-03-02 17:39:05,413 | INFO     | [payload] failed_post thread has finished
[2026-03-02 18:39:32] 2026-03-02 17:39:05,469 | INFO     | [data] copytool_in thread has finished
[2026-03-02 18:39:32] 2026-03-02 17:39:05,472 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 18:39:32] 2026-03-02 17:39:07,064 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 18:39:32] 2026-03-02 17:39:14,031 | INFO     | job.realtimelogging is not enabled
[2026-03-02 18:39:32] 2026-03-02 17:39:15,037 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 18:39:32] 2026-03-02 17:39:16,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-02 18:39:32] 2026-03-02 17:39:21,039 | INFO     | all workflow threads have been joined
[2026-03-02 18:39:32] 2026-03-02 17:39:21,039 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 18:39:32] 2026-03-02 17:39:21,039 | INFO     | traces error code: 0
[2026-03-02 18:39:32] 2026-03-02 17:39:21,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 18:39:32] 2026-03-02 17:39:32,594 | INFO     | PID=2302 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-02 18:39:32] 2026-03-02 17:39:32,594 | INFO     | .. there are 8 such processes running
[2026-03-02 18:39:32] 2026-03-02 17:39:32,595 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 18:39:32] 2026-03-02 17:39:32,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 18:39:32] 2026-03-02 17:39:32,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 18:39:32] 2026-03-02 17:39:32,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 18:39:32] 2026-03-02 17:39:32,595 | INFO     | [monitor] control thread has ended
[2026-03-02 18:39:32] 2026-03-02 17:39:32,647 [wrapper] ==== pilot stdout END ====
[2026-03-02 18:39:32] 2026-03-02 17:39:32,648 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 18:39:32] 2026-03-02 17:39:32,649 [wrapper] pilotpid: 2302
[2026-03-02 18:39:32] 2026-03-02 17:39:32,650 [wrapper] Pilot exit status: 0
[2026-03-02 18:39:32] 2026-03-02 17:39:32,654 [wrapper] pandaids: 7035864188
[2026-03-02 18:39:32] 2026-03-02 17:39:32,678 [wrapper] cleanup supervisor_pilot 22670 2303
[2026-03-02 18:39:32] 2026-03-02 17:39:32,679 [wrapper] Test setup, not cleaning
[2026-03-02 18:39:32] 2026-03-02 17:39:32,680 [wrapper] apfmon messages muted
[2026-03-02 18:39:32] 2026-03-02 17:39:32,681 [wrapper] ==== wrapper stdout END ====
[2026-03-02 18:39:32] 2026-03-02 17:39:32,683 [wrapper] ==== wrapper stderr END ====
[2026-03-02 18:39:32]  *** Error codes and diagnostics ***
[2026-03-02 18:39:32]     "exeErrorCode": 0,
[2026-03-02 18:39:32]     "exeErrorDiag": "",
[2026-03-02 18:39:32]     "pilotErrorCode": 0,
[2026-03-02 18:39:32]     "pilotErrorDiag": "",
[2026-03-02 18:39:32]  *** Listing of results directory ***
[2026-03-02 18:39:32] total 474172
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user    584627 Mar  2 08:34 pilot3.tar.gz
[2026-03-02 18:39:32] -rwx------ 1 mf493845 unix-user     36322 Mar  2 08:34 runpilot2-wrapper.sh
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user      5111 Mar  2 08:35 queuedata.json
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user       100 Mar  2 16:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 18:39:32] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar  2 16:34 run_atlas
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user       105 Mar  2 16:34 job.xml
[2026-03-02 18:39:32] -rw-r--r-- 2 mf493845 unix-user 271436069 Mar  2 17:43 EVNT.48343683._000101.pool.root.1
[2026-03-02 18:39:32] -rw-r--r-- 2 mf493845 unix-user     15845 Mar  2 17:43 start_atlas.sh
[2026-03-02 18:39:32] drwxrwx--x 2 mf493845 unix-user       100 Mar  2 17:43 shared
[2026-03-02 18:39:32] -rw-r--r-- 2 mf493845 unix-user    597951 Mar  2 17:43 input.tar.gz
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user      6391 Mar  2 17:43 init_data.xml
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user         0 Mar  2 17:43 boinc_setup_complete
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user      8192 Mar  2 17:43 boinc_mmap_file
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user         0 Mar  2 17:43 boinc_lockfile
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user      2563 Mar  2 17:43 pandaJob.out
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user    998105 Mar  2 17:43 agis_schedconf.cvmfs.json
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user   1512931 Mar  2 17:43 agis_ddmendpoints.agis.ALL.json
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user       412 Mar  2 17:43 workernode_map.json
[2026-03-02 18:39:32] drwx------ 5 mf493845 unix-user       440 Mar  2 17:43 pilot3
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user 208594025 Mar  2 18:38 HITS.48838521._002396.pool.root.1
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user        95 Mar  2 18:38 pilot_heartbeat.json
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user      1010 Mar  2 18:38 memory_monitor_summary.json
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user    297856 Mar  2 18:38 log.48838521._002396.job.log.tgz.1
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user      6289 Mar  2 18:39 heartbeat.json
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user       819 Mar  2 18:39 pilotlog.txt
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user    515641 Mar  2 18:39 log.48838521._002396.job.log.1
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user       357 Mar  2 18:39 output.list
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user       620 Mar  2 18:39 runtime_log
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user    829440 Mar  2 18:39 result.tar.gz
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user      9219 Mar  2 18:39 runtime_log.err
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user       642 Mar  2 18:39 HGsLDmdyCH9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1uALDm9BzFqn.diag
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user     21879 Mar  2 18:39 stderr.txt
[2026-03-02 18:39:32] HITS file was successfully produced:
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user 208594025 Mar  2 18:38 shared/HITS.pool.root.1
[2026-03-02 18:39:32]  *** Contents of shared directory: ***
[2026-03-02 18:39:32] total 470196
[2026-03-02 18:39:32] -rw-r--r-- 2 mf493845 unix-user 271436069 Mar  2 17:43 ATLAS.root_0
[2026-03-02 18:39:32] -rw-r--r-- 2 mf493845 unix-user     15845 Mar  2 17:43 start_atlas.sh
[2026-03-02 18:39:32] -rw-r--r-- 2 mf493845 unix-user    597951 Mar  2 17:43 input.tar.gz
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user 208594025 Mar  2 18:38 HITS.pool.root.1
[2026-03-02 18:39:32] -rw------- 1 mf493845 unix-user    829440 Mar  2 18:39 result.tar.gz
18:39:34 (29939): run_atlas exited; CPU time 23900.317031
18:39:34 (29939): called boinc_finish(0)

</stderr_txt>
]]>

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