Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:44:09 (680912): wrapper (7.7.26015): starting
07:44:09 (680912): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 07:44:09] Arguments: --nthreads 4
[2026-03-04 07:44:09] Threads: 4
[2026-03-04 07:44:09] Checking for CVMFS
[2026-03-04 07:44:09] No cvmfs_config command found, will try listing directly
[2026-03-04 07:44:09] CVMFS is ok
[2026-03-04 07:44:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 07:44:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 07:44:09] Further information can be found at the LHC@home message board.
[2026-03-04 07:44:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 07:44:09] Checking for apptainer binary...
[2026-03-04 07:44:09] which: no apptainer in ((null))
[2026-03-04 07:44:09] apptainer is not installed, using version from CVMFS
[2026-03-04 07:44:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 07:44:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot208/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-04 07:44:09] apptainer works
[2026-03-04 07:44:09] Set ATHENA_PROC_NUMBER=4
[2026-03-04 07:44:09] Set ATHENA_CORE_NUMBER=4
[2026-03-04 07:44:09] Starting ATLAS job with PandaID=7035912397
[2026-03-04 07:44:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot208/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 11:07:47]  *** The last 200 lines of the pilot log: ***
[2026-03-04 11:07:47] 2026-03-04 10:06:55,679 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 11:07:47] 2026-03-04 10:06:55,679 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 11:07:47] 2026-03-04 10:06:55,680 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 11:07:47] 2026-03-04 10:06:55,680 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 11:07:47] 2026-03-04 10:06:55,682 | INFO     | fitting pss+swap vs Time
[2026-03-04 11:07:47] 2026-03-04 10:06:55,683 | INFO     | sum of square deviations: 2443580700.0
[2026-03-04 11:07:47] 2026-03-04 10:06:55,683 | INFO     | sum of deviations: 26920735879.0
[2026-03-04 11:07:47] 2026-03-04 10:06:55,683 | INFO     | mean x: 1772612722.0
[2026-03-04 11:07:47] 2026-03-04 10:06:55,683 | INFO     | mean y: 2337640.783919598
[2026-03-04 11:07:47] 2026-03-04 10:06:55,683 | INFO     | intersect: -19526396934.96275
[2026-03-04 11:07:47] 2026-03-04 10:06:55,684 | INFO     | chi2: 1.1053522577029526
[2026-03-04 11:07:47] 2026-03-04 10:06:55,684 | INFO     | sum of square deviations: 2263977332.5
[2026-03-04 11:07:47] 2026-03-04 10:06:55,684 | INFO     | sum of deviations: 26108084973.000004
[2026-03-04 11:07:47] 2026-03-04 10:06:55,684 | INFO     | mean x: 1772612569.5
[2026-03-04 11:07:47] 2026-03-04 10:06:55,684 | INFO     | mean y: 2336950.6288659796
[2026-03-04 11:07:47] 2026-03-04 10:06:55,684 | INFO     | intersect: -20439351631.831303
[2026-03-04 11:07:47] 2026-03-04 10:06:55,685 | INFO     | chi2: 1.1057002486928418
[2026-03-04 11:07:47] 2026-03-04 10:06:55,685 | INFO     | current chi2=1.1057002486928418 (change=-0.03148236116261255 %)
[2026-03-04 11:07:47] 2026-03-04 10:06:55,685 | INFO     | right removable region: 193
[2026-03-04 11:07:47] 2026-03-04 10:06:55,685 | INFO     | sum of square deviations: 2263977332.5
[2026-03-04 11:07:47] 2026-03-04 10:06:55,685 | INFO     | sum of deviations: 5967792443.0
[2026-03-04 11:07:47] 2026-03-04 10:06:55,686 | INFO     | mean x: 1772612874.5
[2026-03-04 11:07:47] 2026-03-04 10:06:55,686 | INFO     | mean y: 2355177.711340206
[2026-03-04 11:07:47] 2026-03-04 10:06:55,686 | INFO     | intersect: -4670211797.649756
[2026-03-04 11:07:47] 2026-03-04 10:06:55,686 | INFO     | chi2: 0.0013824341053157916
[2026-03-04 11:07:47] 2026-03-04 10:06:55,686 | INFO     | current chi2=0.0013824341053157916 (change=99.87493271075516 %)
[2026-03-04 11:07:47] 2026-03-04 10:06:55,686 | INFO     | sum of square deviations: 2093397390.0
[2026-03-04 11:07:47] 2026-03-04 10:06:55,687 | INFO     | sum of deviations: 4656181727.999999
[2026-03-04 11:07:47] 2026-03-04 10:06:55,687 | INFO     | mean x: 1772613027.0
[2026-03-04 11:07:47] 2026-03-04 10:06:55,687 | INFO     | mean y: 2356346.761904762
[2026-03-04 11:07:47] 2026-03-04 10:06:55,687 | INFO     | intersect: -3940329560.156213
[2026-03-04 11:07:47] 2026-03-04 10:06:55,687 | INFO     | chi2: 0.0004390534979157892
[2026-03-04 11:07:47] 2026-03-04 10:06:55,687 | INFO     | current chi2=0.0004390534979157892 (change=68.24054786933259 %)
[2026-03-04 11:07:47] 2026-03-04 10:06:55,687 | INFO     | sum of square deviations: 1931608310.0
[2026-03-04 11:07:47] 2026-03-04 10:06:55,688 | INFO     | sum of deviations: 4237588290.5
[2026-03-04 11:07:47] 2026-03-04 10:06:55,688 | INFO     | mean x: 1772613179.5
[2026-03-04 11:07:47] 2026-03-04 10:06:55,688 | INFO     | mean y: 2356740.125
[2026-03-04 11:07:47] 2026-03-04 10:06:55,688 | INFO     | intersect: -3886425894.60863
[2026-03-04 11:07:47] 2026-03-04 10:06:55,688 | INFO     | chi2: 0.00042626786519781945
[2026-03-04 11:07:47] 2026-03-04 10:06:55,688 | INFO     | current chi2=0.00042626786519781945 (change=2.912089934065853 %)
[2026-03-04 11:07:47] 2026-03-04 10:06:55,688 | INFO     | left removable region: 30
[2026-03-04 11:07:47] 2026-03-04 10:06:55,688 | INFO     | sum of square deviations: 1342841922.0
[2026-03-04 11:07:47] 2026-03-04 10:06:55,689 | INFO     | sum of deviations: 2826116457.999999
[2026-03-04 11:07:47] 2026-03-04 10:06:55,689 | INFO     | mean x: 1772613454.0
[2026-03-04 11:07:47] 2026-03-04 10:06:55,689 | INFO     | mean y: 2357799.343558282
[2026-03-04 11:07:47] 2026-03-04 10:06:55,689 | INFO     | intersect: -3728246655.2451215
[2026-03-04 11:07:47] 2026-03-04 10:06:55,689 | INFO     | chi2: 0.0003077743417706807
[2026-03-04 11:07:47] 2026-03-04 10:06:55,689 | INFO     | current memory leak: 2.10 B/s (using 163 data points, chi2=0.00)
[2026-03-04 11:07:47] 2026-03-04 10:06:55,689 | INFO     | could have reported an average CPU frequency of 3566 MHz (10 samples)
[2026-03-04 11:07:47] 2026-03-04 10:06:55,689 | INFO     | ..............................
[2026-03-04 11:07:47] 2026-03-04 10:06:55,689 | INFO     | . Timing measurements:
[2026-03-04 11:07:47] 2026-03-04 10:06:55,689 | INFO     | . get job = 0 s
[2026-03-04 11:07:47] 2026-03-04 10:06:55,689 | INFO     | . initial setup = 5 s
[2026-03-04 11:07:47] 2026-03-04 10:06:55,689 | INFO     | . payload setup = 5 s
[2026-03-04 11:07:47] 2026-03-04 10:06:55,690 | INFO     | . stage-in = 0 s
[2026-03-04 11:07:47] 2026-03-04 10:06:55,690 | INFO     | . payload execution = 12131 s
[2026-03-04 11:07:47] 2026-03-04 10:06:55,690 | INFO     | . stage-out = 0 s
[2026-03-04 11:07:47] 2026-03-04 10:06:55,690 | INFO     | . log creation = 0 s
[2026-03-04 11:07:47] 2026-03-04 10:06:55,690 | INFO     | ..............................
[2026-03-04 11:07:47] 2026-03-04 10:06:55,740 | INFO     | 
[2026-03-04 11:07:47] 2026-03-04 10:06:55,740 | INFO     | job summary report
[2026-03-04 11:07:47] 2026-03-04 10:06:55,740 | INFO     | --------------------------------------------------
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | PanDA job id: 7035912397
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | task id: 48845681
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | errors: (none)
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | pilot state: finished 
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | transexitcode: 0
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | exeerrorcode: 0
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | exeerrordiag: 
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | exitcode: 0
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | exitmsg: OK
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | cpuconsumptiontime: 46097 s
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | nevents: 400
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | neventsw: 0
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | pid: 701884
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | pgrp: 701884
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | corecount: 4
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | event service: False
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | sizes: {0: 2287148, 11: 2287148, 12140: 2317164, 12141: 2326242, 12142: 2326380}
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | --------------------------------------------------
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | 
[2026-03-04 11:07:47] 2026-03-04 10:06:55,741 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot208/slots/0
[2026-03-04 11:07:47] 2026-03-04 10:06:55,759 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,759 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,759 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,759 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,759 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,759 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,760 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 11:07:47] 2026-03-04 10:06:55,760 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,760 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 11:07:47] 2026-03-04 10:06:55,760 | INFO     | job 7035912397 has completed (purged errors)
[2026-03-04 11:07:47] 2026-03-04 10:06:55,760 | INFO     | overall cleanup function is called
[2026-03-04 11:07:47] 2026-03-04 10:06:56,767 | INFO     | --- collectZombieJob: --- 10, [701884]
[2026-03-04 11:07:47] 2026-03-04 10:06:56,768 | INFO     | zombie collector waiting for pid 701884
[2026-03-04 11:07:47] 2026-03-04 10:06:56,768 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 11:07:47] 2026-03-04 10:06:56,768 | INFO     | collected zombie processes
[2026-03-04 11:07:47] 2026-03-04 10:06:56,768 | INFO     | will attempt to kill all subprocesses of pid=701884
[2026-03-04 11:07:47] 2026-03-04 10:06:57,649 | WARNING  | process 701884 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 11:07:47] 2026-03-04 10:06:58,593 | INFO     | process IDs to be killed: [701884] (in reverse order)
[2026-03-04 11:07:47] 2026-03-04 10:06:58,620 | INFO     | using path: /var/lib/boinc/var/slot208/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 11:07:47] 2026-03-04 10:06:58,837 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 11:07:47] 2026-03-04 10:06:58,837 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 11:07:47] 2026-03-04 10:06:58,900 | INFO     | did not find any defunct processes belonging to 701884
[2026-03-04 11:07:47] 2026-03-04 10:06:58,967 | INFO     | did not find any defunct processes belonging to 701884
[2026-03-04 11:07:47] 2026-03-04 10:06:58,968 | INFO     | ready for new job
[2026-03-04 11:07:47] 2026-03-04 10:06:58,968 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 11:07:47] 2026-03-04 10:06:58,969 | INFO     | **************************************
[2026-03-04 11:07:47] 2026-03-04 10:06:58,969 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 11:07:47] 2026-03-04 10:06:58,969 | INFO     | **************************************
[2026-03-04 11:07:47] 2026-03-04 10:06:58,969 | INFO     | 
[2026-03-04 11:07:47] 2026-03-04 10:06:58,977 | INFO     | architecture information:
[2026-03-04 11:07:47] 2026-03-04 10:06:58,978 | INFO     | executing command: cat /etc/os-release
[2026-03-04 11:07:47] 2026-03-04 10:06:58,995 | INFO     | cat /etc/os-release:
[2026-03-04 11:07:47] NAME="CentOS Linux"
[2026-03-04 11:07:47] VERSION="7 (Core)"
[2026-03-04 11:07:47] ID="centos"
[2026-03-04 11:07:47] ID_LIKE="rhel fedora"
[2026-03-04 11:07:47] VERSION_ID="7"
[2026-03-04 11:07:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 11:07:47] ANSI_COLOR="0;31"
[2026-03-04 11:07:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 11:07:47] HOME_URL="https://www.centos.org/"
[2026-03-04 11:07:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 11:07:47] 
[2026-03-04 11:07:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 11:07:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 11:07:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 11:07:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 11:07:47] 
[2026-03-04 11:07:47] 2026-03-04 10:06:58,996 | INFO     | **************************************
[2026-03-04 11:07:47] 2026-03-04 10:06:59,217 | INFO     | number of running child processes to parent process 701884: 1
[2026-03-04 11:07:47] 2026-03-04 10:06:59,217 | INFO     | maximum number of monitored processes: 6
[2026-03-04 11:07:47] 2026-03-04 10:06:59,217 | INFO     | aborting job monitoring since job object (job id=7035912397) has expired
[2026-03-04 11:07:47] 2026-03-04 10:06:59,499 | INFO     | executing command: df -mP /var/lib/boinc/var/slot208/slots/0
[2026-03-04 11:07:47] 2026-03-04 10:06:59,514 | INFO     | sufficient remaining disk space (22239248384 B)
[2026-03-04 11:07:47] 2026-03-04 10:06:59,514 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 11:07:47] 2026-03-04 10:06:59,514 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 11:07:47] 2026-03-04 10:06:59,514 | INFO     | update_server=False
[2026-03-04 11:07:47] 2026-03-04 10:06:59,514 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 11:07:47] 2026-03-04 10:06:59,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 11:07:47] 2026-03-04 10:06:59,515 | INFO     | will abort loop
[2026-03-04 11:07:47] 2026-03-04 10:06:59,694 | INFO     | all data control threads have been joined
[2026-03-04 11:07:47] 2026-03-04 10:06:59,764 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 11:07:47] 2026-03-04 10:06:59,786 | INFO     | job.realtimelogging is not enabled
[2026-03-04 11:07:47] 2026-03-04 10:06:59,966 | INFO     | all payload control threads have been joined
[2026-03-04 11:07:47] 2026-03-04 10:06:59,976 | INFO     | all job control threads have been joined
[2026-03-04 11:07:47] 2026-03-04 10:07:00,518 | INFO     | [job] job monitor thread has finished
[2026-03-04 11:07:47] 2026-03-04 10:07:00,520 | INFO     | [job] retrieve thread has finished
[2026-03-04 11:07:47] 2026-03-04 10:07:00,667 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 11:07:47] 2026-03-04 10:07:00,698 | INFO     | [data] control thread has finished
[2026-03-04 11:07:47] 2026-03-04 10:07:00,699 | INFO     | [job] validate thread has finished
[2026-03-04 11:07:47] 2026-03-04 10:07:00,750 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 11:07:47] 2026-03-04 10:07:00,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 11:07:47] 2026-03-04 10:07:00,790 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 11:07:47] 2026-03-04 10:07:00,838 | INFO     | [payload] validate_post thread has finished
[2026-03-04 11:07:47] 2026-03-04 10:07:00,971 | INFO     | [payload] control thread has finished
[2026-03-04 11:07:47] 2026-03-04 10:07:00,982 | INFO     | [job] control thread has finished
[2026-03-04 11:07:47] 2026-03-04 10:07:01,113 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 11:07:47] 2026-03-04 10:07:01,757 | INFO     | [job] queue monitor thread has finished
[2026-03-04 11:07:47] 2026-03-04 10:07:01,769 | INFO     | [data] copytool_out thread has finished
[2026-03-04 11:07:47] 2026-03-04 10:07:01,830 | INFO     | [data] copytool_in thread has finished
[2026-03-04 11:07:47] 2026-03-04 10:07:01,939 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 11:07:47] 2026-03-04 10:07:02,057 | INFO     | [payload] failed_post thread has finished
[2026-03-04 11:07:47] 2026-03-04 10:07:04,672 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 11:07:47] 2026-03-04 10:07:28,427 | INFO     | PID=687671 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 11:07:47] 2026-03-04 10:07:28,428 | INFO     | .. there are 40 such processes running
[2026-03-04 11:07:47] 2026-03-04 10:07:28,428 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 11:07:47] 2026-03-04 10:07:28,428 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 11:07:47] 2026-03-04 10:07:28,428 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 11:07:47] 2026-03-04 10:07:42,138 | INFO     | [monitor] cgroup control has ended
[2026-03-04 11:07:47] 2026-03-04 10:07:42,154 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23154850977600)>', '<ExcThread(monitor, started 23154612516608)>']
[2026-03-04 11:07:47] 2026-03-04 10:07:42,498 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 11:07:47] 2026-03-04 10:07:42,499 | INFO     | [monitor] control thread has ended
[2026-03-04 11:07:47] 2026-03-04 10:07:47,180 | INFO     | all workflow threads have been joined
[2026-03-04 11:07:47] 2026-03-04 10:07:47,180 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 11:07:47] 2026-03-04 10:07:47,180 | INFO     | traces error code: 0
[2026-03-04 11:07:47] 2026-03-04 10:07:47,180 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 11:07:47] 2026-03-04 10:07:47,326 [wrapper] ==== pilot stdout END ====
[2026-03-04 11:07:47] 2026-03-04 10:07:47,328 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 11:07:47] 2026-03-04 10:07:47,330 [wrapper] pilotpid: 687671
[2026-03-04 11:07:47] 2026-03-04 10:07:47,332 [wrapper] Pilot exit status: 0
[2026-03-04 11:07:47] 2026-03-04 10:07:47,339 [wrapper] pandaids: 7035912397
[2026-03-04 11:07:47] 2026-03-04 10:07:47,465 [wrapper] cleanup supervisor_pilot 2146319 687672
[2026-03-04 11:07:47] 2026-03-04 10:07:47,468 [wrapper] Test setup, not cleaning
[2026-03-04 11:07:47] 2026-03-04 10:07:47,470 [wrapper] apfmon messages muted
[2026-03-04 11:07:47] 2026-03-04 10:07:47,472 [wrapper] ==== wrapper stdout END ====
[2026-03-04 11:07:47] 2026-03-04 10:07:47,474 [wrapper] ==== wrapper stderr END ====
[2026-03-04 11:07:47]  *** Error codes and diagnostics ***
[2026-03-04 11:07:47]     "exeErrorCode": 0,
[2026-03-04 11:07:47]     "exeErrorDiag": "",
[2026-03-04 11:07:47]     "pilotErrorCode": 0,
[2026-03-04 11:07:47]     "pilotErrorDiag": "",
[2026-03-04 11:07:47]  *** Listing of results directory ***
[2026-03-04 11:07:47] total 549072
[2026-03-04 11:07:47] -rw-r--r--. 1 boinc boinc    584627 Mar  2 10:36 pilot3.tar.gz
[2026-03-04 11:07:47] -rwx------. 1 boinc boinc     36322 Mar  2 10:41 runpilot2-wrapper.sh
[2026-03-04 11:07:47] -rw-r--r--. 1 boinc boinc      5111 Mar  2 10:42 queuedata.json
[2026-03-04 11:07:47] -rw-r--r--. 1 boinc boinc       100 Mar  4 07:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 11:07:47] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 07:44 run_atlas
[2026-03-04 11:07:47] -rw-r--r--. 1 boinc boinc       105 Mar  4 07:44 job.xml
[2026-03-04 11:07:47] -rw-r--r--. 2 boinc boinc 271304680 Mar  4 07:44 EVNT.48450513._000002.pool.root.1
[2026-03-04 11:07:47] -rw-r--r--. 2 boinc boinc     15845 Mar  4 07:44 start_atlas.sh
[2026-03-04 11:07:47] drwxrwx--x. 2 boinc boinc      4096 Mar  4 07:44 shared
[2026-03-04 11:07:47] -rw-r--r--. 2 boinc boinc    597961 Mar  4 07:44 input.tar.gz
[2026-03-04 11:07:47] -rw-r--r--. 1 boinc boinc      6707 Mar  4 07:44 init_data.xml
[2026-03-04 11:07:47] -rw-r--r--. 1 boinc boinc         0 Mar  4 07:44 boinc_lockfile
[2026-03-04 11:07:47] -rw-r--r--. 1 boinc boinc      2612 Mar  4 07:44 pandaJob.out
[2026-03-04 11:07:47] -rw-------. 1 boinc boinc    997749 Mar  4 07:44 agis_schedconf.cvmfs.json
[2026-03-04 11:07:47] -rw-------. 1 boinc boinc       444 Mar  4 07:44 workernode_map.json
[2026-03-04 11:07:47] drwx------. 5 boinc boinc      4096 Mar  4 07:44 pilot3
[2026-03-04 11:07:47] -rw-------. 1 boinc boinc 282887902 Mar  4 11:06 HITS.48845681._000028.pool.root.1
[2026-03-04 11:07:47] -rw-r--r--. 1 boinc boinc       529 Mar  4 11:06 boinc_task_state.xml
[2026-03-04 11:07:47] -rw-------. 1 boinc boinc        95 Mar  4 11:06 pilot_heartbeat.json
[2026-03-04 11:07:47] -rw-------. 1 boinc boinc      1032 Mar  4 11:06 memory_monitor_summary.json
[2026-03-04 11:07:47] -rw-------. 1 boinc boinc   1516092 Mar  4 11:06 agis_ddmendpoints.agis.ALL.json
[2026-03-04 11:07:47] -rw-------. 1 boinc boinc    363178 Mar  4 11:06 log.48845681._000028.job.log.tgz.1
[2026-03-04 11:07:47] -rw-------. 1 boinc boinc      6346 Mar  4 11:06 heartbeat.json
[2026-03-04 11:07:47] -rw-r--r--. 1 boinc boinc      8192 Mar  4 11:07 boinc_mmap_file
[2026-03-04 11:07:47] -rw-r--r--. 1 boinc boinc        27 Mar  4 11:07 wrapper_checkpoint.txt
[2026-03-04 11:07:47] -rw-------. 1 boinc boinc      5191 Mar  4 11:07 pilotlog.txt
[2026-03-04 11:07:47] -rw-------. 1 boinc boinc   1695807 Mar  4 11:07 log.48845681._000028.job.log.1
[2026-03-04 11:07:47] -rw-------. 1 boinc boinc       357 Mar  4 11:07 output.list
[2026-03-04 11:07:47] -rw-r--r--. 1 boinc boinc       620 Mar  4 11:07 runtime_log
[2026-03-04 11:07:47] -rw-------. 1 boinc boinc   2078720 Mar  4 11:07 result.tar.gz
[2026-03-04 11:07:47] -rw-r--r--. 1 boinc boinc      9222 Mar  4 11:07 runtime_log.err
[2026-03-04 11:07:47] -rw-------. 1 boinc boinc       665 Mar  4 11:07 2tWNDmCxEH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmOADLDm7wJstm.diag
[2026-03-04 11:07:47] -rw-r--r--. 1 boinc boinc     20835 Mar  4 11:07 stderr.txt
[2026-03-04 11:07:47] HITS file was successfully produced:
[2026-03-04 11:07:47] -rw-------. 1 boinc boinc 282887902 Mar  4 11:06 shared/HITS.pool.root.1
[2026-03-04 11:07:47]  *** Contents of shared directory: ***
[2026-03-04 11:07:47] total 543848
[2026-03-04 11:07:47] -rw-r--r--. 2 boinc boinc 271304680 Mar  4 07:44 ATLAS.root_0
[2026-03-04 11:07:47] -rw-r--r--. 2 boinc boinc     15845 Mar  4 07:44 start_atlas.sh
[2026-03-04 11:07:47] -rw-r--r--. 2 boinc boinc    597961 Mar  4 07:44 input.tar.gz
[2026-03-04 11:07:47] -rw-------. 1 boinc boinc 282887902 Mar  4 11:06 HITS.pool.root.1
[2026-03-04 11:07:47] -rw-------. 1 boinc boinc   2078720 Mar  4 11:07 result.tar.gz
11:08:30 (680912): run_atlas exited; CPU time 46708.469002
11:08:30 (680912): called boinc_finish(0)

</stderr_txt>
]]>

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