Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:56:54 (29012): wrapper (7.7.26015): starting
02:56:54 (29012): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 02:56:54] Arguments: --nthreads 8
[2026-03-03 02:56:54] Threads: 8
[2026-03-03 02:56:54] Checking for CVMFS
[2026-03-03 02:56:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 02:56:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 02:56:56] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 02:56:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 02:56:57] 2.11.2.0 20999 111102 131896 156827 2 53 21115269 25165824 899 130560 155 33345991 99.821 22623377 793 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-03 02:56:57] CVMFS is ok
[2026-03-03 02:56:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 02:56:57] Checking for apptainer binary...
[2026-03-03 02:56:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 02:56:57] Running /usr/bin/apptainer --version
[2026-03-03 02:56:57] apptainer version 1.3.2-1.el7
[2026-03-03 02:56:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 02:57:21] cg-vwn368.simple-grid.lan
[2026-03-03 02:57:21] apptainer works
[2026-03-03 02:57:21] Set ATHENA_PROC_NUMBER=8
[2026-03-03 02:57:21] Set ATHENA_CORE_NUMBER=8
[2026-03-03 02:57:21] Starting ATLAS job with PandaID=7036002377
[2026-03-03 02:57:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 13:01:57]  *** The last 200 lines of the pilot log: ***
[2026-03-03 13:01:57] 2026-03-03 12:01:20,861 | INFO     | job 7036002377 has finished - writing final server update
[2026-03-03 13:01:57] 2026-03-03 12:01:20,861 | INFO     | total number of processed events: 400 (read)
[2026-03-03 13:01:57] 2026-03-03 12:01:20,863 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7036002377/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 13:01:57] 2026-03-03 12:01:20,864 | INFO     | extracted standard info from prmon json
[2026-03-03 13:01:57] 2026-03-03 12:01:20,864 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 13:01:57] 2026-03-03 12:01:20,864 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 13:01:57] 2026-03-03 12:01:20,865 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 13:01:57] 2026-03-03 12:01:20,865 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 13:01:57] 2026-03-03 12:01:20,876 | INFO     | fitting pss+swap vs Time
[2026-03-03 13:01:57] 2026-03-03 12:01:20,878 | INFO     | sum of square deviations: 61444471132.0
[2026-03-03 13:01:57] 2026-03-03 12:01:20,888 | INFO     | sum of deviations: 369945073679.0
[2026-03-03 13:01:57] 2026-03-03 12:01:20,888 | INFO     | mean x: 1772521466.0
[2026-03-03 13:01:57] 2026-03-03 12:01:20,888 | INFO     | mean y: 2499769.550600343
[2026-03-03 13:01:57] 2026-03-03 12:01:20,889 | INFO     | intersect: -10669503296.897392
[2026-03-03 13:01:57] 2026-03-03 12:01:20,889 | INFO     | chi2: 8.916857903483127
[2026-03-03 13:01:57] 2026-03-03 12:01:20,891 | INFO     | sum of square deviations: 59877083604.5
[2026-03-03 13:01:57] 2026-03-03 12:01:20,901 | INFO     | sum of deviations: 405861952094.5
[2026-03-03 13:01:57] 2026-03-03 12:01:20,901 | INFO     | mean x: 1772521313.5
[2026-03-03 13:01:57] 2026-03-03 12:01:20,901 | INFO     | mean y: 2503237.510380623
[2026-03-03 13:01:57] 2026-03-03 12:01:20,902 | INFO     | intersect: -12012092616.52269
[2026-03-03 13:01:57] 2026-03-03 12:01:20,902 | INFO     | chi2: 8.177121174828287
[2026-03-03 13:01:57] 2026-03-03 12:01:20,903 | INFO     | current chi2=8.177121174828287 (change=8.295934920818713 %)
[2026-03-03 13:01:57] 2026-03-03 12:01:20,903 | INFO     | right removable region: 577
[2026-03-03 13:01:57] 2026-03-03 12:01:20,904 | INFO     | sum of square deviations: 59877083604.5
[2026-03-03 13:01:57] 2026-03-03 12:01:20,919 | INFO     | sum of deviations: 159987304852.5
[2026-03-03 13:01:57] 2026-03-03 12:01:20,919 | INFO     | mean x: 1772521618.5
[2026-03-03 13:01:57] 2026-03-03 12:01:20,919 | INFO     | mean y: 2520192.1020761244
[2026-03-03 13:01:57] 2026-03-03 12:01:20,920 | INFO     | intersect: -4733531389.997589
[2026-03-03 13:01:57] 2026-03-03 12:01:20,921 | INFO     | chi2: 4.128555347960826
[2026-03-03 13:01:57] 2026-03-03 12:01:20,921 | INFO     | current chi2=4.128555347960826 (change=53.699437709463574 %)
[2026-03-03 13:01:57] 2026-03-03 12:01:20,922 | INFO     | sum of square deviations: 58336580302.0
[2026-03-03 13:01:57] 2026-03-03 12:01:20,936 | INFO     | sum of deviations: -7301691154.999992
[2026-03-03 13:01:57] 2026-03-03 12:01:20,936 | INFO     | mean x: 1772521771.0
[2026-03-03 13:01:57] 2026-03-03 12:01:20,936 | INFO     | mean y: 2536746.253054101
[2026-03-03 13:01:57] 2026-03-03 12:01:20,936 | INFO     | intersect: 224394223.50582868
[2026-03-03 13:01:57] 2026-03-03 12:01:20,937 | INFO     | chi2: 1.202830954052473
[2026-03-03 13:01:57] 2026-03-03 12:01:20,938 | INFO     | current chi2=1.202830954052473 (change=70.86557275666475 %)
[2026-03-03 13:01:57] 2026-03-03 12:01:20,943 | INFO     | sum of square deviations: 56822728662.0
[2026-03-03 13:01:57] 2026-03-03 12:01:20,957 | INFO     | sum of deviations: -51715498751.5
[2026-03-03 13:01:57] 2026-03-03 12:01:20,957 | INFO     | mean x: 1772521923.5
[2026-03-03 13:01:57] 2026-03-03 12:01:20,957 | INFO     | mean y: 2541207.818661972
[2026-03-03 13:01:57] 2026-03-03 12:01:20,957 | INFO     | intersect: 1615748765.4323552
[2026-03-03 13:01:57] 2026-03-03 12:01:20,962 | INFO     | chi2: 0.9262580318167224
[2026-03-03 13:01:57] 2026-03-03 12:01:20,963 | INFO     | current chi2=0.9262580318167224 (change=22.993498903893798 %)
[2026-03-03 13:01:57] 2026-03-03 12:01:20,963 | INFO     | left removable region: 30
[2026-03-03 13:01:57] 2026-03-03 12:01:20,964 | INFO     | sum of square deviations: 50750339458.0
[2026-03-03 13:01:57] 2026-03-03 12:01:20,984 | INFO     | sum of deviations: -18063857837.000008
[2026-03-03 13:01:57] 2026-03-03 12:01:20,985 | INFO     | mean x: 1772522198.0
[2026-03-03 13:01:57] 2026-03-03 12:01:20,985 | INFO     | mean y: 2545598.427787934
[2026-03-03 13:01:57] 2026-03-03 12:01:20,985 | INFO     | intersect: 633449536.0082792
[2026-03-03 13:01:57] 2026-03-03 12:01:20,986 | INFO     | chi2: 0.09512280294908962
[2026-03-03 13:01:57] 2026-03-03 12:01:21,034 | INFO     | current memory leak: -0.36 B/s (using 547 data points, chi2=0.10)
[2026-03-03 13:01:57] 2026-03-03 12:01:21,035 | INFO     | could have reported an average CPU frequency of 1999 MHz (23 samples)
[2026-03-03 13:01:57] 2026-03-03 12:01:21,036 | INFO     | ..............................
[2026-03-03 13:01:57] 2026-03-03 12:01:21,036 | INFO     | . Timing measurements:
[2026-03-03 13:01:57] 2026-03-03 12:01:21,036 | INFO     | . get job = 0 s
[2026-03-03 13:01:57] 2026-03-03 12:01:21,036 | INFO     | . initial setup = 130 s
[2026-03-03 13:01:57] 2026-03-03 12:01:21,036 | INFO     | . payload setup = 160 s
[2026-03-03 13:01:57] 2026-03-03 12:01:21,036 | INFO     | . stage-in = 0 s
[2026-03-03 13:01:57] 2026-03-03 12:01:21,036 | INFO     | . payload execution = 35685 s
[2026-03-03 13:01:57] 2026-03-03 12:01:21,036 | INFO     | . stage-out = 5 s
[2026-03-03 13:01:57] 2026-03-03 12:01:21,037 | INFO     | . log creation = 1 s
[2026-03-03 13:01:57] 2026-03-03 12:01:21,037 | INFO     | ..............................
[2026-03-03 13:01:57] 2026-03-03 12:01:21,234 | INFO     | 
[2026-03-03 13:01:57] 2026-03-03 12:01:21,238 | INFO     | job summary report
[2026-03-03 13:01:57] 2026-03-03 12:01:21,238 | INFO     | --------------------------------------------------
[2026-03-03 13:01:57] 2026-03-03 12:01:21,239 | INFO     | PanDA job id: 7036002377
[2026-03-03 13:01:57] 2026-03-03 12:01:21,239 | INFO     | task id: 48847296
[2026-03-03 13:01:57] 2026-03-03 12:01:21,239 | INFO     | errors: (none)
[2026-03-03 13:01:57] 2026-03-03 12:01:21,239 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 13:01:57] 2026-03-03 12:01:21,239 | INFO     | pilot state: finished 
[2026-03-03 13:01:57] 2026-03-03 12:01:21,239 | INFO     | transexitcode: 0
[2026-03-03 13:01:57] 2026-03-03 12:01:21,239 | INFO     | exeerrorcode: 0
[2026-03-03 13:01:57] 2026-03-03 12:01:21,239 | INFO     | exeerrordiag: 
[2026-03-03 13:01:57] 2026-03-03 12:01:21,239 | INFO     | exitcode: 0
[2026-03-03 13:01:57] 2026-03-03 12:01:21,240 | INFO     | exitmsg: OK
[2026-03-03 13:01:57] 2026-03-03 12:01:21,240 | INFO     | cpuconsumptiontime: 138294 s
[2026-03-03 13:01:57] 2026-03-03 12:01:21,240 | INFO     | nevents: 400
[2026-03-03 13:01:57] 2026-03-03 12:01:21,240 | INFO     | neventsw: 0
[2026-03-03 13:01:57] 2026-03-03 12:01:21,240 | INFO     | pid: 5037
[2026-03-03 13:01:57] 2026-03-03 12:01:21,240 | INFO     | pgrp: 5037
[2026-03-03 13:01:57] 2026-03-03 12:01:21,240 | INFO     | corecount: 8
[2026-03-03 13:01:57] 2026-03-03 12:01:21,240 | INFO     | event service: False
[2026-03-03 13:01:57] 2026-03-03 12:01:21,240 | INFO     | sizes: {0: 2281902, 1: 2282363, 12: 2282363, 35850: 2322723, 35855: 2336576, 35856: 2336714}
[2026-03-03 13:01:57] 2026-03-03 12:01:21,240 | INFO     | --------------------------------------------------
[2026-03-03 13:01:57] 2026-03-03 12:01:21,241 | INFO     | 
[2026-03-03 13:01:57] 2026-03-03 12:01:21,241 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-03-03 13:01:57] 2026-03-03 12:01:21,660 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,661 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,661 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,661 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,661 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,661 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,661 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,661 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,661 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,662 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,662 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,662 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,662 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,662 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,662 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,662 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,662 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,662 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 13:01:57] 2026-03-03 12:01:21,663 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,663 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 13:01:57] 2026-03-03 12:01:21,663 | INFO     | job 7036002377 has completed (purged errors)
[2026-03-03 13:01:57] 2026-03-03 12:01:21,663 | INFO     | overall cleanup function is called
[2026-03-03 13:01:57] 2026-03-03 12:01:22,672 | INFO     | --- collectZombieJob: --- 10, [5037]
[2026-03-03 13:01:57] 2026-03-03 12:01:22,672 | INFO     | zombie collector waiting for pid 5037
[2026-03-03 13:01:57] 2026-03-03 12:01:22,672 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 13:01:57] 2026-03-03 12:01:22,672 | INFO     | collected zombie processes
[2026-03-03 13:01:57] 2026-03-03 12:01:22,672 | INFO     | will attempt to kill all subprocesses of pid=5037
[2026-03-03 13:01:57] 2026-03-03 12:01:22,755 | INFO     | process IDs to be killed: [5037] (in reverse order)
[2026-03-03 13:01:57] 2026-03-03 12:01:23,742 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 13:01:57] 2026-03-03 12:01:23,743 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 13:01:57] 2026-03-03 12:01:23,745 | INFO     | did not find any defunct processes belonging to 5037
[2026-03-03 13:01:57] 2026-03-03 12:01:23,747 | INFO     | did not find any defunct processes belonging to 5037
[2026-03-03 13:01:57] 2026-03-03 12:01:23,747 | INFO     | ready for new job
[2026-03-03 13:01:57] 2026-03-03 12:01:23,747 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 13:01:57] 2026-03-03 12:01:23,751 | INFO     | **************************************
[2026-03-03 13:01:57] 2026-03-03 12:01:23,753 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 13:01:57] 2026-03-03 12:01:23,753 | INFO     | **************************************
[2026-03-03 13:01:57] 2026-03-03 12:01:23,753 | INFO     | 
[2026-03-03 13:01:57] 2026-03-03 12:01:23,754 | INFO     | pilot is running in a VM
[2026-03-03 13:01:57] 2026-03-03 12:01:23,754 | INFO     | architecture information:
[2026-03-03 13:01:57] 2026-03-03 12:01:23,765 | INFO     | executing command: cat /etc/os-release
[2026-03-03 13:01:57] 2026-03-03 12:01:24,031 | INFO     | cat /etc/os-release:
[2026-03-03 13:01:57] NAME="CentOS Linux"
[2026-03-03 13:01:57] VERSION="7 (Core)"
[2026-03-03 13:01:57] ID="centos"
[2026-03-03 13:01:57] ID_LIKE="rhel fedora"
[2026-03-03 13:01:57] VERSION_ID="7"
[2026-03-03 13:01:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 13:01:57] ANSI_COLOR="0;31"
[2026-03-03 13:01:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 13:01:57] HOME_URL="https://www.centos.org/"
[2026-03-03 13:01:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 13:01:57] 
[2026-03-03 13:01:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 13:01:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 13:01:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 13:01:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 13:01:57] 
[2026-03-03 13:01:57] 2026-03-03 12:01:24,032 | INFO     | **************************************
[2026-03-03 13:01:57] 2026-03-03 12:01:24,535 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-03-03 13:01:57] 2026-03-03 12:01:24,772 | INFO     | sufficient remaining disk space (496005808128 B)
[2026-03-03 13:01:57] 2026-03-03 12:01:24,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 13:01:57] 2026-03-03 12:01:24,773 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 13:01:57] 2026-03-03 12:01:24,773 | INFO     | update_server=False
[2026-03-03 13:01:57] 2026-03-03 12:01:24,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 13:01:57] 2026-03-03 12:01:24,773 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 13:01:57] 2026-03-03 12:01:24,774 | INFO     | aborting loop
[2026-03-03 13:01:57] 2026-03-03 12:01:25,571 | INFO     | all job control threads have been joined
[2026-03-03 13:01:57] 2026-03-03 12:01:25,736 | INFO     | all data control threads have been joined
[2026-03-03 13:01:57] 2026-03-03 12:01:25,779 | INFO     | [job] retrieve thread has finished
[2026-03-03 13:01:57] 2026-03-03 12:01:25,780 | INFO     | [job] job monitor thread has finished
[2026-03-03 13:01:57] 2026-03-03 12:01:25,848 | INFO     | [payload] validate_post thread has finished
[2026-03-03 13:01:57] 2026-03-03 12:01:25,973 | INFO     | [job] validate thread has finished
[2026-03-03 13:01:57] 2026-03-03 12:01:26,037 | INFO     | all payload control threads have been joined
[2026-03-03 13:01:57] 2026-03-03 12:01:26,249 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 13:01:57] 2026-03-03 12:01:26,259 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 13:01:57] 2026-03-03 12:01:26,577 | INFO     | [job] control thread has finished
[2026-03-03 13:01:57] 2026-03-03 12:01:26,591 | INFO     | [data] copytool_in thread has finished
[2026-03-03 13:01:57] 2026-03-03 12:01:26,592 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 13:01:57] 2026-03-03 12:01:26,675 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 13:01:57] 2026-03-03 12:01:26,742 | INFO     | [data] control thread has finished
[2026-03-03 13:01:57] 2026-03-03 12:01:26,812 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 13:01:57] 2026-03-03 12:01:26,870 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 13:01:57] 2026-03-03 12:01:26,932 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 13:01:57] 2026-03-03 12:01:27,043 | INFO     | [payload] control thread has finished
[2026-03-03 13:01:57] 2026-03-03 12:01:27,244 | INFO     | [payload] failed_post thread has finished
[2026-03-03 13:01:57] 2026-03-03 12:01:27,255 | INFO     | [job] queue monitor thread has finished
[2026-03-03 13:01:57] 2026-03-03 12:01:28,266 | INFO     | [data] copytool_out thread has finished
[2026-03-03 13:01:57] 2026-03-03 12:01:30,879 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 13:01:57] 2026-03-03 12:01:34,473 | INFO     | [monitor] cgroup control has ended
[2026-03-03 13:01:57] 2026-03-03 12:01:34,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139782138492736)>', '<ExcThread(monitor, started 139781698733824)>']
[2026-03-03 13:01:57] 2026-03-03 12:01:39,955 | INFO     | all workflow threads have been joined
[2026-03-03 13:01:57] 2026-03-03 12:01:39,955 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 13:01:57] 2026-03-03 12:01:39,955 | INFO     | traces error code: 0
[2026-03-03 13:01:57] 2026-03-03 12:01:39,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 13:01:57] 2026-03-03 12:01:53,538 | INFO     | PID=559 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-03-03 13:01:57] 2026-03-03 12:01:53,543 | INFO     | .. there are 2 such processes running
[2026-03-03 13:01:57] 2026-03-03 12:01:53,543 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 13:01:57] 2026-03-03 12:01:53,543 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 13:01:57] 2026-03-03 12:01:53,544 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 13:01:57] 2026-03-03 12:01:53,544 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 13:01:57] 2026-03-03 12:01:53,544 | INFO     | [monitor] control thread has ended
[2026-03-03 13:01:57] 2026-03-03 12:01:53,900 [wrapper] ==== pilot stdout END ====
[2026-03-03 13:01:57] 2026-03-03 12:01:54,063 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 13:01:57] 2026-03-03 12:01:54,198 [wrapper] pilotpid: 559
[2026-03-03 13:01:57] 2026-03-03 12:01:54,317 [wrapper] Pilot exit status: 0
[2026-03-03 13:01:57] 2026-03-03 12:01:54,338 [wrapper] supervise_pilot (15 min periods counter: 41)
[2026-03-03 13:01:57] 2026-03-03 12:01:54,414 [wrapper] pandaids: 7036002377
[2026-03-03 13:01:57] 2026-03-03 12:01:54,552 [wrapper] cleanup supervisor_pilot 13774 560
[2026-03-03 13:01:57] 2026-03-03 12:01:54,642 [wrapper] Test setup, not cleaning
[2026-03-03 13:01:57] 2026-03-03 12:01:54,745 [wrapper] apfmon messages muted
[2026-03-03 13:01:57] 2026-03-03 12:01:54,809 [wrapper] ==== wrapper stdout END ====
[2026-03-03 13:01:57] 2026-03-03 12:01:54,930 [wrapper] ==== wrapper stderr END ====
[2026-03-03 13:01:57]  *** Error codes and diagnostics ***
[2026-03-03 13:01:57]     "exeErrorCode": 0,
[2026-03-03 13:01:57]     "exeErrorDiag": "",
[2026-03-03 13:01:57]     "pilotErrorCode": 0,
[2026-03-03 13:01:57]     "pilotErrorDiag": "",
[2026-03-03 13:01:57]  *** Listing of results directory ***
[2026-03-03 13:01:57] total 531512
[2026-03-03 13:01:57] -rw-r--r--. 1 boinc boinc      5111 Mar  2 14:57 queuedata.json
[2026-03-03 13:01:57] -rw-r--r--. 1 boinc boinc    584627 Mar  2 14:57 pilot3.tar.gz
[2026-03-03 13:01:57] -rwx------. 1 boinc boinc     36322 Mar  2 14:58 runpilot2-wrapper.sh
[2026-03-03 13:01:57] -rw-r--r--. 1 boinc boinc       100 Mar  3 02:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 13:01:57] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 02:56 run_atlas
[2026-03-03 13:01:57] -rw-r--r--. 1 boinc boinc       105 Mar  3 02:56 job.xml
[2026-03-03 13:01:57] -rw-r--r--. 2 boinc boinc 267099883 Mar  3 02:56 EVNT.48453377._000002.pool.root.1
[2026-03-03 13:01:57] -rw-r--r--. 2 boinc boinc     15845 Mar  3 02:56 start_atlas.sh
[2026-03-03 13:01:57] drwxrwx--x. 2 boinc boinc        68 Mar  3 02:56 shared
[2026-03-03 13:01:57] -rw-r--r--. 2 boinc boinc    597953 Mar  3 02:56 input.tar.gz
[2026-03-03 13:01:57] -rw-r--r--. 1 boinc boinc      6390 Mar  3 02:56 init_data.xml
[2026-03-03 13:01:57] -rw-r--r--. 1 boinc boinc         0 Mar  3 02:56 boinc_lockfile
[2026-03-03 13:01:57] -rw-r--r--. 1 boinc boinc      2609 Mar  3 02:57 pandaJob.out
[2026-03-03 13:01:57] -rw-------. 1 boinc boinc       415 Mar  3 03:03 workernode_map.json
[2026-03-03 13:01:57] -rw-------. 1 boinc boinc    997722 Mar  3 03:03 agis_schedconf.cvmfs.json
[2026-03-03 13:01:57] drwx------. 5 boinc boinc      4096 Mar  3 03:03 pilot3
[2026-03-03 13:01:57] -rw-------. 1 boinc boinc 261784368 Mar  3 12:59 HITS.48847296._000044.pool.root.1
[2026-03-03 13:01:57] -rw-r--r--. 1 boinc boinc       532 Mar  3 13:00 boinc_task_state.xml
[2026-03-03 13:01:57] -rw-------. 1 boinc boinc      1011 Mar  3 13:01 memory_monitor_summary.json
[2026-03-03 13:01:57] -rw-------. 1 boinc boinc   1516104 Mar  3 13:01 agis_ddmendpoints.agis.ALL.json
[2026-03-03 13:01:57] -rw-------. 1 boinc boinc        95 Mar  3 13:01 pilot_heartbeat.json
[2026-03-03 13:01:57] -rw-------. 1 boinc boinc    765720 Mar  3 13:01 log.48847296._000044.job.log.tgz.1
[2026-03-03 13:01:57] -rw-------. 1 boinc boinc      6313 Mar  3 13:01 heartbeat.json
[2026-03-03 13:01:57] -rw-r--r--. 1 boinc boinc      8192 Mar  3 13:01 boinc_mmap_file
[2026-03-03 13:01:57] -rw-r--r--. 1 boinc boinc        29 Mar  3 13:01 wrapper_checkpoint.txt
[2026-03-03 13:01:57] -rw-------. 1 boinc boinc       818 Mar  3 13:01 pilotlog.txt
[2026-03-03 13:01:57] -rw-------. 1 boinc boinc   4966528 Mar  3 13:01 log.48847296._000044.job.log.1
[2026-03-03 13:01:57] -rw-------. 1 boinc boinc       357 Mar  3 13:01 output.list
[2026-03-03 13:01:57] -rw-r--r--. 1 boinc boinc       620 Mar  3 13:01 runtime_log
[2026-03-03 13:01:57] -rw-------. 1 boinc boinc   5754880 Mar  3 13:01 result.tar.gz
[2026-03-03 13:01:57] -rw-r--r--. 1 boinc boinc      8816 Mar  3 13:01 runtime_log.err
[2026-03-03 13:01:57] -rw-------. 1 boinc boinc       658 Mar  3 13:01 9XRMDmrxIH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm0WDLDm1JY7Fn.diag
[2026-03-03 13:01:57] -rw-r--r--. 1 boinc boinc     20670 Mar  3 13:01 stderr.txt
[2026-03-03 13:01:57] HITS file was successfully produced:
[2026-03-03 13:01:57] -rw-------. 1 boinc boinc 261784368 Mar  3 12:59 shared/HITS.pool.root.1
[2026-03-03 13:01:57]  *** Contents of shared directory: ***
[2026-03-03 13:01:57] total 522712
[2026-03-03 13:01:57] -rw-r--r--. 2 boinc boinc 267099883 Mar  3 02:56 ATLAS.root_0
[2026-03-03 13:01:57] -rw-r--r--. 2 boinc boinc     15845 Mar  3 02:56 start_atlas.sh
[2026-03-03 13:01:57] -rw-r--r--. 2 boinc boinc    597953 Mar  3 02:56 input.tar.gz
[2026-03-03 13:01:57] -rw-------. 1 boinc boinc 261784368 Mar  3 12:59 HITS.pool.root.1
[2026-03-03 13:01:57] -rw-------. 1 boinc boinc   5754880 Mar  3 13:01 result.tar.gz
13:01:59 (29012): run_atlas exited; CPU time 138716.338638
13:01:59 (29012): called boinc_finish(0)

</stderr_txt>
]]>

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