Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:43:21 (1300543): wrapper (7.7.26015): starting
09:43:21 (1300543): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 09:43:21] Arguments: --nthreads 4
[2026-03-03 09:43:21] Threads: 4
[2026-03-03 09:43:21] Checking for CVMFS
[2026-03-03 09:43:21] No cvmfs_config command found, will try listing directly
[2026-03-03 09:43:21] CVMFS is ok
[2026-03-03 09:43:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 09:43:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 09:43:21] Further information can be found at the LHC@home message board.
[2026-03-03 09:43:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 09:43:21] Checking for apptainer binary...
[2026-03-03 09:43:21] which: no apptainer in ((null))
[2026-03-03 09:43:21] apptainer is not installed, using version from CVMFS
[2026-03-03 09:43:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 09:43:21] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-03 09:43:21] apptainer works
[2026-03-03 09:43:21] Set ATHENA_PROC_NUMBER=4
[2026-03-03 09:43:21] Set ATHENA_CORE_NUMBER=4
[2026-03-03 09:43:21] Starting ATLAS job with PandaID=7035911407
[2026-03-03 09:43:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 11:20:48]  *** The last 200 lines of the pilot log: ***
[2026-03-03 11:20:48]  lfn=log.48844672._000048.job.log.tgz.1
[2026-03-03 11:20:48]  mtime=0
[2026-03-03 11:20:48]  protocol_id=None
[2026-03-03 11:20:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-03 11:20:48]  replicas=None
[2026-03-03 11:20:48]  scope=mc23_13p6TeV
[2026-03-03 11:20:48]  status=None
[2026-03-03 11:20:48]  status_code=0
[2026-03-03 11:20:48]  storage_token=
[2026-03-03 11:20:48]  surl=/var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7035911407/log.48844672._000048.job.log.tgz.1
[2026-03-03 11:20:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/ab/log.48844672._000048.job.log.tgz.1
[2026-03-03 11:20:48]  workdir=None
[2026-03-03 11:20:48] ]
[2026-03-03 11:20:48] 2026-03-03 10:19:48,481 | INFO     | transferring file log.48844672._000048.job.log.tgz.1 from /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7035911407/log.48844672._000048.job.log.tgz.1 to /var/lib/
[2026-03-03 11:20:48] 2026-03-03 10:19:48,481 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7035911407/log.48844672._000048.job.log.tgz.1 /var/lib/boinc/var/slot120/slots/0/
[2026-03-03 11:20:48] 2026-03-03 10:19:48,497 | INFO     | adding to output.list: log.48844672._000048.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/ab/log.48844672._000048.job.log.tg
[2026-03-03 11:20:48] 2026-03-03 10:19:48,497 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 11:20:48] 2026-03-03 10:19:48,497 | INFO     | summary of transferred files:
[2026-03-03 11:20:48] 2026-03-03 10:19:48,497 | INFO     |  -- lfn=log.48844672._000048.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 11:20:48] 2026-03-03 10:19:48,497 | INFO     | stage-out finished correctly
[2026-03-03 11:20:48] 2026-03-03 10:19:48,544 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 11:20:48] 2026-03-03 10:19:50,214 | INFO     | time since job start (5777s) is within the limit (349056.0s)
[2026-03-03 11:20:48] 2026-03-03 10:19:50,986 | INFO     | job 7035911407 has state=finished
[2026-03-03 11:20:48] 2026-03-03 10:19:50,987 | INFO     | preparing for final server update for job 7035911407 in state='finished'
[2026-03-03 11:20:48] 2026-03-03 10:19:50,987 | INFO     | reading metadata from: /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7035911407/jobReport.json
[2026-03-03 11:20:48] 2026-03-03 10:19:50,988 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot120/slots/0/workernode_map.json
[2026-03-03 11:20:48] 2026-03-03 10:19:50,988 | INFO     | this job has now completed (state=finished)
[2026-03-03 11:20:48] 2026-03-03 10:19:50,988 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 11:20:48] 2026-03-03 10:19:50,988 | INFO     | log transfer has been attempted: DONE
[2026-03-03 11:20:48] 2026-03-03 10:19:50,988 | INFO     | job 7035911407 has finished - writing final server update
[2026-03-03 11:20:48] 2026-03-03 10:19:50,989 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_16238/.job.ad'
[2026-03-03 11:20:48] 2026-03-03 10:19:50,989 | INFO     | total number of processed events: 400 (read)
[2026-03-03 11:20:48] 2026-03-03 10:19:51,006 | INFO     | using path: /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7035911407/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 11:20:48] 2026-03-03 10:19:51,006 | INFO     | extracted standard info from prmon json
[2026-03-03 11:20:48] 2026-03-03 10:19:51,006 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 11:20:48] 2026-03-03 10:19:51,006 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 11:20:48] 2026-03-03 10:19:51,006 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 11:20:48] 2026-03-03 10:19:51,006 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 11:20:48] 2026-03-03 10:19:51,007 | INFO     | fitting pss+swap vs Time
[2026-03-03 11:20:48] 2026-03-03 10:19:51,008 | INFO     | sum of square deviations: 211285822.0
[2026-03-03 11:20:48] 2026-03-03 10:19:51,008 | INFO     | sum of deviations: -120125744.5
[2026-03-03 11:20:48] 2026-03-03 10:19:51,008 | INFO     | mean x: 1772530390.5
[2026-03-03 11:20:48] 2026-03-03 10:19:51,008 | INFO     | mean y: 2338553.784090909
[2026-03-03 11:20:48] 2026-03-03 10:19:51,008 | INFO     | intersect: 1010103915.3789084
[2026-03-03 11:20:48] 2026-03-03 10:19:51,008 | INFO     | chi2: 0.0003220351348572909
[2026-03-03 11:20:48] 2026-03-03 10:19:51,008 | INFO     | current memory leak: -0.57 B/s (using 88 data points, chi2=0.00)
[2026-03-03 11:20:48] 2026-03-03 10:19:51,008 | INFO     | could have reported an average CPU frequency of 3616 MHz (7 samples)
[2026-03-03 11:20:48] 2026-03-03 10:19:51,008 | INFO     | ..............................
[2026-03-03 11:20:48] 2026-03-03 10:19:51,008 | INFO     | . Timing measurements:
[2026-03-03 11:20:48] 2026-03-03 10:19:51,008 | INFO     | . get job = 0 s
[2026-03-03 11:20:48] 2026-03-03 10:19:51,008 | INFO     | . initial setup = 4 s
[2026-03-03 11:20:48] 2026-03-03 10:19:51,008 | INFO     | . payload setup = 4 s
[2026-03-03 11:20:48] 2026-03-03 10:19:51,008 | INFO     | . stage-in = 0 s
[2026-03-03 11:20:48] 2026-03-03 10:19:51,008 | INFO     | . payload execution = 5756 s
[2026-03-03 11:20:48] 2026-03-03 10:19:51,008 | INFO     | . stage-out = 0 s
[2026-03-03 11:20:48] 2026-03-03 10:19:51,009 | INFO     | . log creation = 0 s
[2026-03-03 11:20:48] 2026-03-03 10:19:51,009 | INFO     | ..............................
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | 
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | job summary report
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | --------------------------------------------------
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | PanDA job id: 7035911407
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | task id: 48844672
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | errors: (none)
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | pilot state: finished 
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | transexitcode: 0
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | exeerrorcode: 0
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | exeerrordiag: 
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | exitcode: 0
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | exitmsg: OK
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | cpuconsumptiontime: 22285 s
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | nevents: 400
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | neventsw: 0
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | pid: 1310815
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | pgrp: 1310815
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | corecount: 4
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | event service: False
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | sizes: {0: 2282312, 11: 2282312, 5764: 2318070, 5767: 2318208}
[2026-03-03 11:20:48] 2026-03-03 10:19:51,054 | INFO     | --------------------------------------------------
[2026-03-03 11:20:48] 2026-03-03 10:19:51,055 | INFO     | 
[2026-03-03 11:20:48] 2026-03-03 10:19:51,055 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot120/slots/0
[2026-03-03 11:20:48] 2026-03-03 10:19:51,070 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | job 7035911407 has completed (purged errors)
[2026-03-03 11:20:48] 2026-03-03 10:19:51,071 | INFO     | overall cleanup function is called
[2026-03-03 11:20:48] 2026-03-03 10:19:51,651 | INFO     | PID=1305060 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 11:20:48] 2026-03-03 10:19:51,651 | INFO     | .. there are 47 such processes running
[2026-03-03 11:20:48] 2026-03-03 10:19:52,076 | INFO     | --- collectZombieJob: --- 10, [1310815]
[2026-03-03 11:20:48] 2026-03-03 10:19:52,077 | INFO     | zombie collector waiting for pid 1310815
[2026-03-03 11:20:48] 2026-03-03 10:19:52,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 11:20:48] 2026-03-03 10:19:52,077 | INFO     | collected zombie processes
[2026-03-03 11:20:48] 2026-03-03 10:19:52,077 | INFO     | will attempt to kill all subprocesses of pid=1310815
[2026-03-03 11:20:48] 2026-03-03 10:19:52,987 | INFO     | process IDs to be killed: [1310815] (in reverse order)
[2026-03-03 11:20:48] 2026-03-03 10:19:52,996 | WARNING  | process 1310815 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 11:20:48] 2026-03-03 10:19:53,161 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 11:20:48] 2026-03-03 10:19:53,161 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 11:20:48] 2026-03-03 10:19:53,197 | INFO     | did not find any defunct processes belonging to 1310815
[2026-03-03 11:20:48] 2026-03-03 10:19:53,239 | INFO     | did not find any defunct processes belonging to 1310815
[2026-03-03 11:20:48] 2026-03-03 10:19:53,239 | INFO     | ready for new job
[2026-03-03 11:20:48] 2026-03-03 10:19:53,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 11:20:48] 2026-03-03 10:19:53,240 | INFO     | **************************************
[2026-03-03 11:20:48] 2026-03-03 10:19:53,240 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 11:20:48] 2026-03-03 10:19:53,240 | INFO     | **************************************
[2026-03-03 11:20:48] 2026-03-03 10:19:53,240 | INFO     | 
[2026-03-03 11:20:48] 2026-03-03 10:19:53,246 | INFO     | architecture information:
[2026-03-03 11:20:48] 2026-03-03 10:19:53,247 | INFO     | executing command: cat /etc/os-release
[2026-03-03 11:20:48] 2026-03-03 10:19:53,257 | INFO     | cat /etc/os-release:
[2026-03-03 11:20:48] NAME="CentOS Linux"
[2026-03-03 11:20:48] VERSION="7 (Core)"
[2026-03-03 11:20:48] ID="centos"
[2026-03-03 11:20:48] ID_LIKE="rhel fedora"
[2026-03-03 11:20:48] VERSION_ID="7"
[2026-03-03 11:20:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 11:20:48] ANSI_COLOR="0;31"
[2026-03-03 11:20:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 11:20:48] HOME_URL="https://www.centos.org/"
[2026-03-03 11:20:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 11:20:48] 
[2026-03-03 11:20:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 11:20:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 11:20:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 11:20:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 11:20:48] 
[2026-03-03 11:20:48] 2026-03-03 10:19:53,257 | INFO     | **************************************
[2026-03-03 11:20:48] 2026-03-03 10:19:53,315 | INFO     | using path: /var/lib/boinc/var/slot120/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 11:20:48] 2026-03-03 10:19:53,689 | INFO     | number of running child processes to parent process 1310815: 1
[2026-03-03 11:20:48] 2026-03-03 10:19:53,689 | INFO     | maximum number of monitored processes: 6
[2026-03-03 11:20:48] 2026-03-03 10:19:53,689 | INFO     | aborting job monitoring since job object (job id=7035911407) has expired
[2026-03-03 11:20:48] 2026-03-03 10:19:53,758 | INFO     | executing command: df -mP /var/lib/boinc/var/slot120/slots/0
[2026-03-03 11:20:48] 2026-03-03 10:19:53,769 | INFO     | sufficient remaining disk space (21204303872 B)
[2026-03-03 11:20:48] 2026-03-03 10:19:53,769 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 11:20:48] 2026-03-03 10:19:53,769 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 11:20:48] 2026-03-03 10:19:53,769 | INFO     | update_server=False
[2026-03-03 11:20:48] 2026-03-03 10:19:53,769 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 11:20:48] 2026-03-03 10:19:53,769 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 11:20:48] 2026-03-03 10:19:53,769 | INFO     | will abort loop
[2026-03-03 11:20:48] 2026-03-03 10:19:53,866 | INFO     | all payload control threads have been joined
[2026-03-03 11:20:48] 2026-03-03 10:19:53,937 | INFO     | all data control threads have been joined
[2026-03-03 11:20:48] 2026-03-03 10:19:54,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 11:20:48] 2026-03-03 10:19:54,534 | INFO     | all job control threads have been joined
[2026-03-03 11:20:48] 2026-03-03 10:19:54,628 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 11:20:48] 2026-03-03 10:19:54,774 | INFO     | [job] retrieve thread has finished
[2026-03-03 11:20:48] 2026-03-03 10:19:54,774 | INFO     | [job] job monitor thread has finished
[2026-03-03 11:20:48] 2026-03-03 10:19:54,792 | INFO     | job.realtimelogging is not enabled
[2026-03-03 11:20:48] 2026-03-03 10:19:54,872 | INFO     | [payload] control thread has finished
[2026-03-03 11:20:48] 2026-03-03 10:19:54,943 | INFO     | [data] control thread has finished
[2026-03-03 11:20:48] 2026-03-03 10:19:55,001 | INFO     | [data] copytool_in thread has finished
[2026-03-03 11:20:48] 2026-03-03 10:19:55,026 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 11:20:48] 2026-03-03 10:19:55,466 | INFO     | [payload] validate_post thread has finished
[2026-03-03 11:20:48] 2026-03-03 10:19:55,540 | INFO     | [job] control thread has finished
[2026-03-03 11:20:48] 2026-03-03 10:19:55,795 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 11:20:48] 2026-03-03 10:19:56,014 | INFO     | [payload] failed_post thread has finished
[2026-03-03 11:20:48] 2026-03-03 10:19:56,063 | INFO     | [data] copytool_out thread has finished
[2026-03-03 11:20:48] 2026-03-03 10:19:56,064 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 11:20:48] 2026-03-03 10:19:56,089 | INFO     | [job] validate thread has finished
[2026-03-03 11:20:48] 2026-03-03 10:19:56,209 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 11:20:48] 2026-03-03 10:19:56,210 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 11:20:48] 2026-03-03 10:19:57,066 | INFO     | [job] queue monitor thread has finished
[2026-03-03 11:20:48] 2026-03-03 10:19:58,634 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 11:20:48] 2026-03-03 10:20:24,176 | INFO     | PID=1305060 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 11:20:48] 2026-03-03 10:20:24,177 | INFO     | .. there are 47 such processes running
[2026-03-03 11:20:48] 2026-03-03 10:20:24,177 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 11:20:48] 2026-03-03 10:20:24,177 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 11:20:48] 2026-03-03 10:20:24,177 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 11:20:48] 2026-03-03 10:20:41,843 | INFO     | [monitor] cgroup control has ended
[2026-03-03 11:20:48] 2026-03-03 10:20:43,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22862029391680)>', '<ExcThread(monitor, started 22861787174656)>']
[2026-03-03 11:20:48] 2026-03-03 10:20:43,266 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 11:20:48] 2026-03-03 10:20:43,267 | INFO     | [monitor] control thread has ended
[2026-03-03 11:20:48] 2026-03-03 10:20:48,268 | INFO     | all workflow threads have been joined
[2026-03-03 11:20:48] 2026-03-03 10:20:48,268 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 11:20:48] 2026-03-03 10:20:48,268 | INFO     | traces error code: 0
[2026-03-03 11:20:48] 2026-03-03 10:20:48,268 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 11:20:48] 2026-03-03 10:20:48,386 [wrapper] ==== pilot stdout END ====
[2026-03-03 11:20:48] 2026-03-03 10:20:48,388 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 11:20:48] 2026-03-03 10:20:48,390 [wrapper] pilotpid: 1305060
[2026-03-03 11:20:48] 2026-03-03 10:20:48,392 [wrapper] Pilot exit status: 0
[2026-03-03 11:20:48] 2026-03-03 10:20:48,398 [wrapper] pandaids: 7035911407
[2026-03-03 11:20:48] 2026-03-03 10:20:48,492 [wrapper] cleanup supervisor_pilot 2069536 1305061
[2026-03-03 11:20:48] 2026-03-03 10:20:48,495 [wrapper] Test setup, not cleaning
[2026-03-03 11:20:48] 2026-03-03 10:20:48,497 [wrapper] apfmon messages muted
[2026-03-03 11:20:48] 2026-03-03 10:20:48,499 [wrapper] ==== wrapper stdout END ====
[2026-03-03 11:20:48] 2026-03-03 10:20:48,501 [wrapper] ==== wrapper stderr END ====
[2026-03-03 11:20:48]  *** Error codes and diagnostics ***
[2026-03-03 11:20:48]     "exeErrorCode": 0,
[2026-03-03 11:20:48]     "exeErrorDiag": "",
[2026-03-03 11:20:48]     "pilotErrorCode": 0,
[2026-03-03 11:20:48]     "pilotErrorDiag": "",
[2026-03-03 11:20:48]  *** Listing of results directory ***
[2026-03-03 11:20:48] total 413820
[2026-03-03 11:20:48] -rw-r--r--. 1 boinc boinc    584627 Mar  2 10:36 pilot3.tar.gz
[2026-03-03 11:20:48] -rw-r--r--. 1 boinc boinc      5111 Mar  2 10:38 queuedata.json
[2026-03-03 11:20:48] -rwx------. 1 boinc boinc     36322 Mar  2 10:38 runpilot2-wrapper.sh
[2026-03-03 11:20:48] -rw-r--r--. 1 boinc boinc       100 Mar  3 09:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 11:20:48] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 09:43 run_atlas
[2026-03-03 11:20:48] -rw-r--r--. 1 boinc boinc       105 Mar  3 09:43 job.xml
[2026-03-03 11:20:48] -rw-r--r--. 2 boinc boinc 237596617 Mar  3 09:43 EVNT.48453886._000002.pool.root.1
[2026-03-03 11:20:48] -rw-r--r--. 2 boinc boinc     15845 Mar  3 09:43 start_atlas.sh
[2026-03-03 11:20:48] drwxrwx--x. 2 boinc boinc      4096 Mar  3 09:43 shared
[2026-03-03 11:20:48] -rw-r--r--. 2 boinc boinc    597971 Mar  3 09:43 input.tar.gz
[2026-03-03 11:20:48] -rw-r--r--. 1 boinc boinc      6705 Mar  3 09:43 init_data.xml
[2026-03-03 11:20:48] -rw-r--r--. 1 boinc boinc         0 Mar  3 09:43 boinc_lockfile
[2026-03-03 11:20:48] -rw-r--r--. 1 boinc boinc      2620 Mar  3 09:43 pandaJob.out
[2026-03-03 11:20:48] -rw-------. 1 boinc boinc    998420 Mar  3 09:43 agis_schedconf.cvmfs.json
[2026-03-03 11:20:48] -rw-------. 1 boinc boinc   1512931 Mar  3 09:43 agis_ddmendpoints.agis.ALL.json
[2026-03-03 11:20:48] -rw-------. 1 boinc boinc       445 Mar  3 09:43 workernode_map.json
[2026-03-03 11:20:48] drwx------. 5 boinc boinc      4096 Mar  3 09:43 pilot3
[2026-03-03 11:20:48] -rw-------. 1 boinc boinc 179948418 Mar  3 11:19 HITS.48844672._000048.pool.root.1
[2026-03-03 11:20:48] -rw-------. 1 boinc boinc        95 Mar  3 11:19 pilot_heartbeat.json
[2026-03-03 11:20:48] -rw-r--r--. 1 boinc boinc       529 Mar  3 11:19 boinc_task_state.xml
[2026-03-03 11:20:48] -rw-------. 1 boinc boinc      1030 Mar  3 11:19 memory_monitor_summary.json
[2026-03-03 11:20:48] -rw-------. 1 boinc boinc    295659 Mar  3 11:19 log.48844672._000048.job.log.tgz.1
[2026-03-03 11:20:48] -rw-------. 1 boinc boinc      6347 Mar  3 11:19 heartbeat.json
[2026-03-03 11:20:48] -rw-r--r--. 1 boinc boinc      8192 Mar  3 11:20 boinc_mmap_file
[2026-03-03 11:20:48] -rw-r--r--. 1 boinc boinc        27 Mar  3 11:20 wrapper_checkpoint.txt
[2026-03-03 11:20:48] -rw-------. 1 boinc boinc      5321 Mar  3 11:20 pilotlog.txt
[2026-03-03 11:20:48] -rw-------. 1 boinc boinc    841812 Mar  3 11:20 log.48844672._000048.job.log.1
[2026-03-03 11:20:48] -rw-------. 1 boinc boinc       357 Mar  3 11:20 output.list
[2026-03-03 11:20:48] -rw-r--r--. 1 boinc boinc       620 Mar  3 11:20 runtime_log
[2026-03-03 11:20:48] -rw-------. 1 boinc boinc   1157120 Mar  3 11:20 result.tar.gz
[2026-03-03 11:20:48] -rw-r--r--. 1 boinc boinc      9221 Mar  3 11:20 runtime_log.err
[2026-03-03 11:20:48] -rw-------. 1 boinc boinc       662 Mar  3 11:20 JKJMDmOuEH9n9Rq4apOajLDm4fhM0noT9bVooX4SDm13ALDmU6mSwn.diag
[2026-03-03 11:20:48] -rw-r--r--. 1 boinc boinc     21571 Mar  3 11:20 stderr.txt
[2026-03-03 11:20:48] HITS file was successfully produced:
[2026-03-03 11:20:48] -rw-------. 1 boinc boinc 179948418 Mar  3 11:19 shared/HITS.pool.root.1
[2026-03-03 11:20:48]  *** Contents of shared directory: ***
[2026-03-03 11:20:48] total 409500
[2026-03-03 11:20:48] -rw-r--r--. 2 boinc boinc 237596617 Mar  3 09:43 ATLAS.root_0
[2026-03-03 11:20:48] -rw-r--r--. 2 boinc boinc     15845 Mar  3 09:43 start_atlas.sh
[2026-03-03 11:20:48] -rw-r--r--. 2 boinc boinc    597971 Mar  3 09:43 input.tar.gz
[2026-03-03 11:20:48] -rw-------. 1 boinc boinc 179948418 Mar  3 11:19 HITS.pool.root.1
[2026-03-03 11:20:48] -rw-------. 1 boinc boinc   1157120 Mar  3 11:20 result.tar.gz
11:20:50 (1300543): run_atlas exited; CPU time 22518.832066
11:20:50 (1300543): called boinc_finish(0)

</stderr_txt>
]]>

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