Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:10:28 (12965): wrapper (7.7.26015): starting
03:10:28 (12965): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 03:10:28] Arguments: --nthreads 8
[2026-03-03 03:10:28] Threads: 8
[2026-03-03 03:10:28] Checking for CVMFS
[2026-03-03 03:10:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 03:10:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 03:10:30] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 03:10:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 03:10:31] 2.11.2.0 17161 91360 133888 156827 2 53 23877437 25165825 899 130560 155 20109897 99.806 13446328 569 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-03 03:10:31] CVMFS is ok
[2026-03-03 03:10:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 03:10:31] Checking for apptainer binary...
[2026-03-03 03:10:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 03:10:31] Running /usr/bin/apptainer --version
[2026-03-03 03:10:31] apptainer version 1.3.2-1.el7
[2026-03-03 03:10:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 03:11:08] cg-vwn491.simple-grid.lan
[2026-03-03 03:11:08] apptainer works
[2026-03-03 03:11:08] Set ATHENA_PROC_NUMBER=8
[2026-03-03 03:11:08] Set ATHENA_CORE_NUMBER=8
[2026-03-03 03:11:08] Starting ATLAS job with PandaID=7035904269
[2026-03-03 03:11:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 07:46:58]  *** The last 200 lines of the pilot log: ***
[2026-03-03 07:46:58] 2026-03-03 06:45:56,848 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7035904269/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 07:46:58] 2026-03-03 06:45:56,849 | INFO     | extracted standard info from prmon json
[2026-03-03 07:46:58] 2026-03-03 06:45:56,849 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 07:46:58] 2026-03-03 06:45:56,849 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 07:46:58] 2026-03-03 06:45:56,849 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 07:46:58] 2026-03-03 06:45:56,850 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 07:46:58] 2026-03-03 06:45:56,855 | INFO     | fitting pss+swap vs Time
[2026-03-03 07:46:58] 2026-03-03 06:45:56,855 | INFO     | sum of square deviations: 5449944045.0
[2026-03-03 07:46:58] 2026-03-03 06:45:56,861 | INFO     | sum of deviations: 111254587150.99998
[2026-03-03 07:46:58] 2026-03-03 06:45:56,861 | INFO     | mean x: 1772512422.5
[2026-03-03 07:46:58] 2026-03-03 06:45:56,861 | INFO     | mean y: 2470356.523076923
[2026-03-03 07:46:58] 2026-03-03 06:45:56,861 | INFO     | intersect: -36181412662.63851
[2026-03-03 07:46:58] 2026-03-03 06:45:56,862 | INFO     | chi2: 8.91425605749079
[2026-03-03 07:46:58] 2026-03-03 06:45:56,862 | INFO     | sum of square deviations: 5141528960.0
[2026-03-03 07:46:58] 2026-03-03 06:45:56,864 | INFO     | sum of deviations: 126246068174.99998
[2026-03-03 07:46:58] 2026-03-03 06:45:56,865 | INFO     | mean x: 1772512270.0
[2026-03-03 07:46:58] 2026-03-03 06:45:56,865 | INFO     | mean y: 2477636.4901960786
[2026-03-03 07:46:58] 2026-03-03 06:45:56,865 | INFO     | intersect: -43520121695.41048
[2026-03-03 07:46:58] 2026-03-03 06:45:56,865 | INFO     | chi2: 8.227304951015478
[2026-03-03 07:46:58] 2026-03-03 06:45:56,865 | INFO     | current chi2=8.227304951015478 (change=7.706207921838376 %)
[2026-03-03 07:46:58] 2026-03-03 06:45:56,866 | INFO     | right removable region: 254
[2026-03-03 07:46:58] 2026-03-03 06:45:56,866 | INFO     | sum of square deviations: 5141528960.0
[2026-03-03 07:46:58] 2026-03-03 06:45:56,868 | INFO     | sum of deviations: 19268871661.99999
[2026-03-03 07:46:58] 2026-03-03 06:45:56,868 | INFO     | mean x: 1772512575.0
[2026-03-03 07:46:58] 2026-03-03 06:45:56,868 | INFO     | mean y: 2515813.6
[2026-03-03 07:46:58] 2026-03-03 06:45:56,869 | INFO     | intersect: -6640317007.661815
[2026-03-03 07:46:58] 2026-03-03 06:45:56,869 | INFO     | chi2: 3.8279518709102334
[2026-03-03 07:46:58] 2026-03-03 06:45:56,869 | INFO     | current chi2=3.8279518709102334 (change=57.05808935459572 %)
[2026-03-03 07:46:58] 2026-03-03 06:45:56,870 | INFO     | sum of square deviations: 4844974562.5
[2026-03-03 07:46:58] 2026-03-03 06:45:56,872 | INFO     | sum of deviations: -50466420844.49999
[2026-03-03 07:46:58] 2026-03-03 06:45:56,872 | INFO     | mean x: 1772512727.5
[2026-03-03 07:46:58] 2026-03-03 06:45:56,872 | INFO     | mean y: 2551630.884
[2026-03-03 07:46:58] 2026-03-03 06:45:56,872 | INFO     | intersect: 18465470703.897717
[2026-03-03 07:46:58] 2026-03-03 06:45:56,873 | INFO     | chi2: 1.0855900602223851
[2026-03-03 07:46:58] 2026-03-03 06:45:56,873 | INFO     | current chi2=1.0855900602223851 (change=71.6404464624513 %)
[2026-03-03 07:46:58] 2026-03-03 06:45:56,873 | INFO     | sum of square deviations: 4560048290.0
[2026-03-03 07:46:58] 2026-03-03 06:45:56,875 | INFO     | sum of deviations: -61705365142.99999
[2026-03-03 07:46:58] 2026-03-03 06:45:56,875 | INFO     | mean x: 1772512880.0
[2026-03-03 07:46:58] 2026-03-03 06:45:56,876 | INFO     | mean y: 2557609.089795918
[2026-03-03 07:46:58] 2026-03-03 06:45:56,876 | INFO     | intersect: 23987732222.464455
[2026-03-03 07:46:58] 2026-03-03 06:45:56,876 | INFO     | chi2: 0.9632813641381011
[2026-03-03 07:46:58] 2026-03-03 06:45:56,880 | INFO     | current chi2=0.9632813641381011 (change=11.266563739468001 %)
[2026-03-03 07:46:58] 2026-03-03 06:45:56,880 | INFO     | left removable region: 30
[2026-03-03 07:46:58] 2026-03-03 06:45:56,880 | INFO     | sum of square deviations: 3485088600.0
[2026-03-03 07:46:58] 2026-03-03 06:45:56,882 | INFO     | sum of deviations: -25730183019.0
[2026-03-03 07:46:58] 2026-03-03 06:45:56,882 | INFO     | mean x: 1772513154.5
[2026-03-03 07:46:58] 2026-03-03 06:45:56,882 | INFO     | mean y: 2555906.7678571427
[2026-03-03 07:46:58] 2026-03-03 06:45:56,883 | INFO     | intersect: 13088905524.642714
[2026-03-03 07:46:58] 2026-03-03 06:45:56,883 | INFO     | chi2: 0.13755826986805664
[2026-03-03 07:46:58] 2026-03-03 06:45:56,883 | INFO     | current memory leak: -7.38 B/s (using 224 data points, chi2=0.14)
[2026-03-03 07:46:58] 2026-03-03 06:45:56,884 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-03-03 07:46:58] 2026-03-03 06:45:56,884 | INFO     | ..............................
[2026-03-03 07:46:58] 2026-03-03 06:45:56,884 | INFO     | . Timing measurements:
[2026-03-03 07:46:58] 2026-03-03 06:45:56,884 | INFO     | . get job = 0 s
[2026-03-03 07:46:58] 2026-03-03 06:45:56,884 | INFO     | . initial setup = 120 s
[2026-03-03 07:46:58] 2026-03-03 06:45:56,884 | INFO     | . payload setup = 146 s
[2026-03-03 07:46:58] 2026-03-03 06:45:56,885 | INFO     | . stage-in = 0 s
[2026-03-03 07:46:58] 2026-03-03 06:45:56,885 | INFO     | . payload execution = 15948 s
[2026-03-03 07:46:58] 2026-03-03 06:45:56,885 | INFO     | . stage-out = 12 s
[2026-03-03 07:46:58] 2026-03-03 06:45:56,885 | INFO     | . log creation = 1 s
[2026-03-03 07:46:58] 2026-03-03 06:45:56,885 | INFO     | ..............................
[2026-03-03 07:46:58] 2026-03-03 06:45:56,986 | INFO     | time since job start (16117s) is within the limit (349056.0s)
[2026-03-03 07:46:58] 2026-03-03 06:45:57,033 | INFO     | 
[2026-03-03 07:46:58] 2026-03-03 06:45:57,034 | INFO     | job summary report
[2026-03-03 07:46:58] 2026-03-03 06:45:57,034 | INFO     | --------------------------------------------------
[2026-03-03 07:46:58] 2026-03-03 06:45:57,034 | INFO     | PanDA job id: 7035904269
[2026-03-03 07:46:58] 2026-03-03 06:45:57,034 | INFO     | task id: 48838605
[2026-03-03 07:46:58] 2026-03-03 06:45:57,034 | INFO     | errors: (none)
[2026-03-03 07:46:58] 2026-03-03 06:45:57,034 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 07:46:58] 2026-03-03 06:45:57,034 | INFO     | pilot state: finished 
[2026-03-03 07:46:58] 2026-03-03 06:45:57,034 | INFO     | transexitcode: 0
[2026-03-03 07:46:58] 2026-03-03 06:45:57,035 | INFO     | exeerrorcode: 0
[2026-03-03 07:46:58] 2026-03-03 06:45:57,035 | INFO     | exeerrordiag: 
[2026-03-03 07:46:58] 2026-03-03 06:45:57,035 | INFO     | exitcode: 0
[2026-03-03 07:46:58] 2026-03-03 06:45:57,035 | INFO     | exitmsg: OK
[2026-03-03 07:46:58] 2026-03-03 06:45:57,035 | INFO     | cpuconsumptiontime: 59670 s
[2026-03-03 07:46:58] 2026-03-03 06:45:57,035 | INFO     | nevents: 400
[2026-03-03 07:46:58] 2026-03-03 06:45:57,035 | INFO     | neventsw: 0
[2026-03-03 07:46:58] 2026-03-03 06:45:57,035 | INFO     | pid: 21398
[2026-03-03 07:46:58] 2026-03-03 06:45:57,035 | INFO     | pgrp: 21398
[2026-03-03 07:46:58] 2026-03-03 06:45:57,035 | INFO     | corecount: 8
[2026-03-03 07:46:58] 2026-03-03 06:45:57,035 | INFO     | event service: False
[2026-03-03 07:46:58] 2026-03-03 06:45:57,036 | INFO     | sizes: {0: 2281134, 1: 2282192, 2: 2282280, 16099: 2313669, 16100: 2313668, 16113: 2322750, 16114: 2322934, 16115: 2323128}
[2026-03-03 07:46:58] 2026-03-03 06:45:57,036 | INFO     | --------------------------------------------------
[2026-03-03 07:46:58] 2026-03-03 06:45:57,036 | INFO     | 
[2026-03-03 07:46:58] 2026-03-03 06:45:57,036 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-03-03 07:46:58] 2026-03-03 06:45:57,525 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,525 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,525 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,525 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,526 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,526 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,526 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,526 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,526 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,526 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,526 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,526 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,526 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,527 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,527 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,527 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,527 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,527 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 07:46:58] 2026-03-03 06:45:57,527 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,527 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 07:46:58] 2026-03-03 06:45:57,527 | INFO     | job 7035904269 has completed (purged errors)
[2026-03-03 07:46:58] 2026-03-03 06:45:57,527 | INFO     | overall cleanup function is called
[2026-03-03 07:46:58] 2026-03-03 06:45:58,082 | INFO     | PID=16929 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-03 07:46:58] 2026-03-03 06:45:58,082 | INFO     | .. there are 2 such processes running
[2026-03-03 07:46:58] 2026-03-03 06:45:58,541 | INFO     | --- collectZombieJob: --- 10, [21398]
[2026-03-03 07:46:58] 2026-03-03 06:45:58,542 | INFO     | zombie collector waiting for pid 21398
[2026-03-03 07:46:58] 2026-03-03 06:45:58,542 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 07:46:58] 2026-03-03 06:45:58,542 | INFO     | collected zombie processes
[2026-03-03 07:46:58] 2026-03-03 06:45:58,542 | INFO     | will attempt to kill all subprocesses of pid=21398
[2026-03-03 07:46:58] 2026-03-03 06:45:58,617 | INFO     | process IDs to be killed: [21398] (in reverse order)
[2026-03-03 07:46:58] 2026-03-03 06:45:59,377 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 07:46:58] 2026-03-03 06:45:59,377 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 07:46:58] 2026-03-03 06:45:59,379 | INFO     | did not find any defunct processes belonging to 21398
[2026-03-03 07:46:58] 2026-03-03 06:45:59,381 | INFO     | did not find any defunct processes belonging to 21398
[2026-03-03 07:46:58] 2026-03-03 06:45:59,381 | INFO     | ready for new job
[2026-03-03 07:46:58] 2026-03-03 06:45:59,382 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 07:46:58] 2026-03-03 06:45:59,384 | INFO     | **************************************
[2026-03-03 07:46:58] 2026-03-03 06:45:59,384 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 07:46:58] 2026-03-03 06:45:59,384 | INFO     | **************************************
[2026-03-03 07:46:58] 2026-03-03 06:45:59,384 | INFO     | 
[2026-03-03 07:46:58] 2026-03-03 06:45:59,385 | INFO     | pilot is running in a VM
[2026-03-03 07:46:58] 2026-03-03 06:45:59,385 | INFO     | architecture information:
[2026-03-03 07:46:58] 2026-03-03 06:45:59,385 | INFO     | executing command: cat /etc/os-release
[2026-03-03 07:46:58] 2026-03-03 06:45:59,613 | INFO     | cat /etc/os-release:
[2026-03-03 07:46:58] NAME="CentOS Linux"
[2026-03-03 07:46:58] VERSION="7 (Core)"
[2026-03-03 07:46:58] ID="centos"
[2026-03-03 07:46:58] ID_LIKE="rhel fedora"
[2026-03-03 07:46:58] VERSION_ID="7"
[2026-03-03 07:46:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 07:46:58] ANSI_COLOR="0;31"
[2026-03-03 07:46:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 07:46:58] HOME_URL="https://www.centos.org/"
[2026-03-03 07:46:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 07:46:58] 
[2026-03-03 07:46:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 07:46:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 07:46:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 07:46:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 07:46:58] 
[2026-03-03 07:46:58] 2026-03-03 06:45:59,613 | INFO     | **************************************
[2026-03-03 07:46:58] 2026-03-03 06:46:00,120 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-03-03 07:46:58] 2026-03-03 06:46:00,425 | INFO     | sufficient remaining disk space (496542679040 B)
[2026-03-03 07:46:58] 2026-03-03 06:46:00,425 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 07:46:58] 2026-03-03 06:46:00,426 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 07:46:58] 2026-03-03 06:46:00,426 | INFO     | update_server=False
[2026-03-03 07:46:58] 2026-03-03 06:46:00,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 07:46:58] 2026-03-03 06:46:00,642 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 07:46:58] 2026-03-03 06:46:00,733 | INFO     | all payload control threads have been joined
[2026-03-03 07:46:58] 2026-03-03 06:46:00,763 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 07:46:58] 2026-03-03 06:46:00,764 | INFO     | aborting loop
[2026-03-03 07:46:58] 2026-03-03 06:46:01,078 | INFO     | all data control threads have been joined
[2026-03-03 07:46:58] 2026-03-03 06:46:01,432 | INFO     | [job] retrieve thread has finished
[2026-03-03 07:46:58] 2026-03-03 06:46:01,559 | INFO     | [payload] validate_post thread has finished
[2026-03-03 07:46:58] 2026-03-03 06:46:01,621 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 07:46:58] 2026-03-03 06:46:01,740 | INFO     | [payload] control thread has finished
[2026-03-03 07:46:58] 2026-03-03 06:46:01,770 | INFO     | [job] job monitor thread has finished
[2026-03-03 07:46:58] 2026-03-03 06:46:01,782 | INFO     | [job] validate thread has finished
[2026-03-03 07:46:58] 2026-03-03 06:46:01,988 | INFO     | [data] copytool_in thread has finished
[2026-03-03 07:46:58] 2026-03-03 06:46:01,995 | INFO     | all job control threads have been joined
[2026-03-03 07:46:58] 2026-03-03 06:46:02,037 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 07:46:58] 2026-03-03 06:46:02,041 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 07:46:58] 2026-03-03 06:46:02,085 | INFO     | [data] control thread has finished
[2026-03-03 07:46:58] 2026-03-03 06:46:02,175 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 07:46:58] 2026-03-03 06:46:02,586 | INFO     | [payload] failed_post thread has finished
[2026-03-03 07:46:58] 2026-03-03 06:46:02,614 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 07:46:58] 2026-03-03 06:46:02,615 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 07:46:58] 2026-03-03 06:46:02,649 | INFO     | [data] copytool_out thread has finished
[2026-03-03 07:46:58] 2026-03-03 06:46:03,001 | INFO     | [job] control thread has finished
[2026-03-03 07:46:58] 2026-03-03 06:46:03,047 | INFO     | [job] queue monitor thread has finished
[2026-03-03 07:46:58] 2026-03-03 06:46:06,046 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 07:46:58] 2026-03-03 06:46:30,211 | INFO     | PID=16929 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-03 07:46:58] 2026-03-03 06:46:30,212 | INFO     | .. there are 2 such processes running
[2026-03-03 07:46:58] 2026-03-03 06:46:30,212 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 07:46:58] 2026-03-03 06:46:30,212 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 07:46:58] 2026-03-03 06:46:30,212 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 07:46:58] 2026-03-03 06:46:46,288 | INFO     | [monitor] cgroup control has ended
[2026-03-03 07:46:58] 2026-03-03 06:46:47,895 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140648612976448)>', '<ExcThread(monitor, started 140647939950336)>']
[2026-03-03 07:46:58] 2026-03-03 06:46:48,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 07:46:58] 2026-03-03 06:46:48,321 | INFO     | [monitor] control thread has ended
[2026-03-03 07:46:58] 2026-03-03 06:46:52,921 | INFO     | all workflow threads have been joined
[2026-03-03 07:46:58] 2026-03-03 06:46:52,922 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 07:46:58] 2026-03-03 06:46:52,922 | INFO     | traces error code: 0
[2026-03-03 07:46:58] 2026-03-03 06:46:52,922 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 07:46:58] 2026-03-03 06:46:53,407 [wrapper] ==== pilot stdout END ====
[2026-03-03 07:46:58] 2026-03-03 06:46:53,502 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 07:46:58] 2026-03-03 06:46:53,616 [wrapper] pilotpid: 16929
[2026-03-03 07:46:58] 2026-03-03 06:46:53,721 [wrapper] Pilot exit status: 0
[2026-03-03 07:46:58] 2026-03-03 06:46:54,212 [wrapper] pandaids: 7035904269
[2026-03-03 07:46:58] 2026-03-03 06:46:55,302 [wrapper] cleanup supervisor_pilot 27783 16930
[2026-03-03 07:46:58] 2026-03-03 06:46:55,403 [wrapper] Test setup, not cleaning
[2026-03-03 07:46:58] 2026-03-03 06:46:55,511 [wrapper] apfmon messages muted
[2026-03-03 07:46:58] 2026-03-03 06:46:55,631 [wrapper] ==== wrapper stdout END ====
[2026-03-03 07:46:58] 2026-03-03 06:46:55,724 [wrapper] ==== wrapper stderr END ====
[2026-03-03 07:46:58]  *** Error codes and diagnostics ***
[2026-03-03 07:46:58]     "exeErrorCode": 0,
[2026-03-03 07:46:58]     "exeErrorDiag": "",
[2026-03-03 07:46:58]     "pilotErrorCode": 0,
[2026-03-03 07:46:58]     "pilotErrorDiag": "",
[2026-03-03 07:46:58]  *** Listing of results directory ***
[2026-03-03 07:46:58] total 493572
[2026-03-03 07:46:58] -rw-r--r--. 1 boinc boinc    584627 Mar  2 08:34 pilot3.tar.gz
[2026-03-03 07:46:58] -rwx------. 1 boinc boinc     36322 Mar  2 08:34 runpilot2-wrapper.sh
[2026-03-03 07:46:58] -rw-r--r--. 1 boinc boinc      5111 Mar  2 08:35 queuedata.json
[2026-03-03 07:46:58] -rw-r--r--. 1 boinc boinc       100 Mar  3 03:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 07:46:58] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 03:10 run_atlas
[2026-03-03 07:46:58] -rw-r--r--. 1 boinc boinc       105 Mar  3 03:10 job.xml
[2026-03-03 07:46:58] -rw-r--r--. 1 boinc boinc      6391 Mar  3 03:10 init_data.xml
[2026-03-03 07:46:58] -rw-r--r--. 2 boinc boinc 281812791 Mar  3 03:10 EVNT.48343768._000065.pool.root.1
[2026-03-03 07:46:58] -rw-r--r--. 2 boinc boinc     15845 Mar  3 03:10 start_atlas.sh
[2026-03-03 07:46:58] drwxrwx--x. 2 boinc boinc        68 Mar  3 03:10 shared
[2026-03-03 07:46:58] -rw-r--r--. 2 boinc boinc    597956 Mar  3 03:10 input.tar.gz
[2026-03-03 07:46:58] -rw-r--r--. 1 boinc boinc         0 Mar  3 03:10 boinc_lockfile
[2026-03-03 07:46:58] -rw-r--r--. 1 boinc boinc      2563 Mar  3 03:11 pandaJob.out
[2026-03-03 07:46:58] -rw-------. 1 boinc boinc       415 Mar  3 03:17 workernode_map.json
[2026-03-03 07:46:58] -rw-------. 1 boinc boinc    997738 Mar  3 03:17 agis_schedconf.cvmfs.json
[2026-03-03 07:46:58] drwx------. 5 boinc boinc      4096 Mar  3 03:17 pilot3
[2026-03-03 07:46:58] -rw-------. 1 boinc boinc 214171357 Mar  3 07:44 HITS.48838605._001744.pool.root.1
[2026-03-03 07:46:58] -rw-r--r--. 1 boinc boinc       531 Mar  3 07:44 boinc_task_state.xml
[2026-03-03 07:46:58] -rw-------. 1 boinc boinc        95 Mar  3 07:45 pilot_heartbeat.json
[2026-03-03 07:46:58] -rw-------. 1 boinc boinc      1023 Mar  3 07:45 memory_monitor_summary.json
[2026-03-03 07:46:58] -rw-------. 1 boinc boinc   1512931 Mar  3 07:45 agis_ddmendpoints.agis.ALL.json
[2026-03-03 07:46:58] -rw-------. 1 boinc boinc    498540 Mar  3 07:45 log.48838605._001744.job.log.tgz.1
[2026-03-03 07:46:58] -rw-------. 1 boinc boinc      6318 Mar  3 07:45 heartbeat.json
[2026-03-03 07:46:58] -rw-r--r--. 1 boinc boinc      8192 Mar  3 07:46 boinc_mmap_file
[2026-03-03 07:46:58] -rw-r--r--. 1 boinc boinc        28 Mar  3 07:46 wrapper_checkpoint.txt
[2026-03-03 07:46:58] -rw-------. 1 boinc boinc      4880 Mar  3 07:46 pilotlog.txt
[2026-03-03 07:46:58] -rw-------. 1 boinc boinc   2261242 Mar  3 07:46 log.48838605._001744.job.log.1
[2026-03-03 07:46:58] -rw-------. 1 boinc boinc       357 Mar  3 07:46 output.list
[2026-03-03 07:46:58] -rw-r--r--. 1 boinc boinc       620 Mar  3 07:46 runtime_log
[2026-03-03 07:46:58] -rw-------. 1 boinc boinc   2775040 Mar  3 07:46 result.tar.gz
[2026-03-03 07:46:58] -rw-------. 1 boinc boinc       656 Mar  3 07:46 XN3LDmmyCH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmJwALDmZ1NAYo.diag
[2026-03-03 07:46:58] -rw-r--r--. 1 boinc boinc      8816 Mar  3 07:46 runtime_log.err
[2026-03-03 07:46:58] -rw-r--r--. 1 boinc boinc     20823 Mar  3 07:46 stderr.txt
[2026-03-03 07:46:58] HITS file was successfully produced:
[2026-03-03 07:46:58] -rw-------. 1 boinc boinc 214171357 Mar  3 07:44 shared/HITS.pool.root.1
[2026-03-03 07:46:58]  *** Contents of shared directory: ***
[2026-03-03 07:46:58] total 487672
[2026-03-03 07:46:58] -rw-r--r--. 2 boinc boinc 281812791 Mar  3 03:10 ATLAS.root_0
[2026-03-03 07:46:58] -rw-r--r--. 2 boinc boinc     15845 Mar  3 03:10 start_atlas.sh
[2026-03-03 07:46:58] -rw-r--r--. 2 boinc boinc    597956 Mar  3 03:10 input.tar.gz
[2026-03-03 07:46:58] -rw-------. 1 boinc boinc 214171357 Mar  3 07:44 HITS.pool.root.1
[2026-03-03 07:46:58] -rw-------. 1 boinc boinc   2775040 Mar  3 07:46 result.tar.gz
07:47:00 (12965): run_atlas exited; CPU time 59834.973597
07:47:00 (12965): called boinc_finish(0)

</stderr_txt>
]]>

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