Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:03:39 (1818798): wrapper (7.7.26015): starting
02:03:39 (1818798): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 02:03:39] Arguments: --nthreads 12
[2026-03-03 02:03:39] Threads: 12
[2026-03-03 02:03:39] Checking for CVMFS
[2026-03-03 02:03:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 02:03:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 02:03:39] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 02:03:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 02:03:40] 2.13.3.0 4372 35574 152304 156826 3 188 39218727 46080000 922 130560 0 38177693 99.994 1201769 546 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-03-03 02:03:40] CVMFS is ok
[2026-03-03 02:03:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 02:03:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 02:03:40] Further information can be found at the LHC@home message board.
[2026-03-03 02:03:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 02:03:40] Checking for apptainer binary...
[2026-03-03 02:03:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 02:03:40] Running /usr/bin/apptainer --version
[2026-03-03 02:03:40] apptainer version 1.4.5-2.el9
[2026-03-03 02:03:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 02:03:40] gpu01.farm.particle.cz
[2026-03-03 02:03:40] apptainer works
[2026-03-03 02:03:40] Set ATHENA_PROC_NUMBER=12
[2026-03-03 02:03:40] Set ATHENA_CORE_NUMBER=12
[2026-03-03 02:03:40] Starting ATLAS job with PandaID=7035730688
[2026-03-03 02:03:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 02:54:43]  *** The last 200 lines of the pilot log: ***
[2026-03-03 02:54:43]  is_altstaged=None
[2026-03-03 02:54:43]  is_tar=False
[2026-03-03 02:54:43]  lfn=log.48844739._000041.job.log.tgz.1
[2026-03-03 02:54:43]  mtime=0
[2026-03-03 02:54:43]  protocol_id=None
[2026-03-03 02:54:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-03 02:54:43]  replicas=None
[2026-03-03 02:54:43]  scope=mc23_13p6TeV
[2026-03-03 02:54:43]  status=None
[2026-03-03 02:54:43]  status_code=0
[2026-03-03 02:54:43]  storage_token=
[2026-03-03 02:54:43]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-7035730688/log.48844739._000041.job.log.tgz.1
[2026-03-03 02:54:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/aa/log.48844739._000041.job.log.tgz.1
[2026-03-03 02:54:43]  workdir=None
[2026-03-03 02:54:43] ]
[2026-03-03 02:54:43] 2026-03-03 01:53:51,390 | INFO     | transferring file log.48844739._000041.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-7035730688/log.48844739._000041.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-03-03 02:54:43] 2026-03-03 01:53:51,391 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-7035730688/log.48844739._000041.job.log.tgz.1 /var/lib/boinc/slots/0/log.48844739._000041.job
[2026-03-03 02:54:43] 2026-03-03 01:53:51,405 | INFO     | adding to output.list: log.48844739._000041.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/aa/log.48844739._000041.job.log.tg
[2026-03-03 02:54:43] 2026-03-03 01:53:51,405 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 02:54:43] 2026-03-03 01:53:51,405 | INFO     | summary of transferred files:
[2026-03-03 02:54:43] 2026-03-03 01:53:51,405 | INFO     |  -- lfn=log.48844739._000041.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 02:54:43] 2026-03-03 01:53:51,406 | INFO     | stage-out finished correctly
[2026-03-03 02:54:43] 2026-03-03 01:53:51,555 | INFO     | PID=1822661 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 02:54:43] 2026-03-03 01:53:51,556 | INFO     | .. there are 2 such processes running
[2026-03-03 02:54:43] 2026-03-03 01:53:52,203 | INFO     | monitor loop #227: job 0:7035730688 is in state 'finished'
[2026-03-03 02:54:43] 2026-03-03 01:53:52,204 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 02:54:43] 2026-03-03 01:53:52,556 | INFO     | time since job start (2959s) is within the limit (349056.0s)
[2026-03-03 02:54:43] 2026-03-03 01:53:53,759 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 02:54:43] 2026-03-03 01:53:54,562 | INFO     | time since job start (2961s) is within the limit (349056.0s)
[2026-03-03 02:54:43] 2026-03-03 01:53:54,707 | INFO     | monitor loop #228: job 0:7035730688 is in state 'finished'
[2026-03-03 02:54:43] 2026-03-03 01:53:54,707 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 02:54:43] 2026-03-03 01:53:55,669 | INFO     | job 7035730688 has state=finished
[2026-03-03 02:54:43] 2026-03-03 01:53:55,669 | INFO     | preparing for final server update for job 7035730688 in state='finished'
[2026-03-03 02:54:43] 2026-03-03 01:53:55,670 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-7035730688/jobReport.json
[2026-03-03 02:54:43] 2026-03-03 01:53:55,672 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-03-03 02:54:43] 2026-03-03 01:53:55,673 | INFO     | this job has now completed (state=finished)
[2026-03-03 02:54:43] 2026-03-03 01:53:55,673 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 02:54:43] 2026-03-03 01:53:55,673 | INFO     | log transfer has been attempted: DONE
[2026-03-03 02:54:43] 2026-03-03 01:53:55,673 | INFO     | job 7035730688 has finished - writing final server update
[2026-03-03 02:54:43] 2026-03-03 01:53:55,673 | INFO     | total number of processed events: 400 (read)
[2026-03-03 02:54:43] 2026-03-03 01:53:55,679 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-7035730688/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 02:54:43] 2026-03-03 01:53:55,679 | INFO     | extracted standard info from prmon json
[2026-03-03 02:54:43] 2026-03-03 01:53:55,679 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 02:54:43] 2026-03-03 01:53:55,679 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 02:54:43] 2026-03-03 01:53:55,679 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 02:54:43] 2026-03-03 01:53:55,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 02:54:43] 2026-03-03 01:53:55,680 | INFO     | fitting pss+swap vs Time
[2026-03-03 02:54:43] 2026-03-03 01:53:55,681 | INFO     | sum of square deviations: 22960430.5
[2026-03-03 02:54:43] 2026-03-03 01:53:55,681 | INFO     | sum of deviations: -684488685.9999999
[2026-03-03 02:54:43] 2026-03-03 01:53:55,681 | INFO     | mean x: 1772501446.5
[2026-03-03 02:54:43] 2026-03-03 01:53:55,681 | INFO     | mean y: 2744192.095238095
[2026-03-03 02:54:43] 2026-03-03 01:53:55,681 | INFO     | intersect: 52843965355.08189
[2026-03-03 02:54:43] 2026-03-03 01:53:55,681 | INFO     | chi2: 0.013353819224195174
[2026-03-03 02:54:43] 2026-03-03 01:53:55,681 | INFO     | current memory leak: -29.81 B/s (using 42 data points, chi2=0.01)
[2026-03-03 02:54:43] 2026-03-03 01:53:55,681 | INFO     | could have reported an average CPU frequency of 3241 MHz (5 samples)
[2026-03-03 02:54:43] 2026-03-03 01:53:55,682 | INFO     | ..............................
[2026-03-03 02:54:43] 2026-03-03 01:53:55,682 | INFO     | . Timing measurements:
[2026-03-03 02:54:43] 2026-03-03 01:53:55,682 | INFO     | . get job = 0 s
[2026-03-03 02:54:43] 2026-03-03 01:53:55,682 | INFO     | . initial setup = 47 s
[2026-03-03 02:54:43] 2026-03-03 01:53:55,682 | INFO     | . payload setup = 3 s
[2026-03-03 02:54:43] 2026-03-03 01:53:55,682 | INFO     | . stage-in = 0 s
[2026-03-03 02:54:43] 2026-03-03 01:53:55,682 | INFO     | . payload execution = 2939 s
[2026-03-03 02:54:43] 2026-03-03 01:53:55,682 | INFO     | . stage-out = 0 s
[2026-03-03 02:54:43] 2026-03-03 01:53:55,682 | INFO     | . log creation = 0 s
[2026-03-03 02:54:43] 2026-03-03 01:53:55,682 | INFO     | ..............................
[2026-03-03 02:54:43] 2026-03-03 01:53:55,757 | INFO     | 
[2026-03-03 02:54:43] 2026-03-03 01:53:55,757 | INFO     | job summary report
[2026-03-03 02:54:43] 2026-03-03 01:53:55,757 | INFO     | --------------------------------------------------
[2026-03-03 02:54:43] 2026-03-03 01:53:55,757 | INFO     | PanDA job id: 7035730688
[2026-03-03 02:54:43] 2026-03-03 01:53:55,757 | INFO     | task id: 48844739
[2026-03-03 02:54:43] 2026-03-03 01:53:55,757 | INFO     | errors: (none)
[2026-03-03 02:54:43] 2026-03-03 01:53:55,757 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 02:54:43] 2026-03-03 01:53:55,757 | INFO     | pilot state: finished 
[2026-03-03 02:54:43] 2026-03-03 01:53:55,758 | INFO     | transexitcode: 0
[2026-03-03 02:54:43] 2026-03-03 01:53:55,758 | INFO     | exeerrorcode: 0
[2026-03-03 02:54:43] 2026-03-03 01:53:55,758 | INFO     | exeerrordiag: 
[2026-03-03 02:54:43] 2026-03-03 01:53:55,758 | INFO     | exitcode: 0
[2026-03-03 02:54:43] 2026-03-03 01:53:55,758 | INFO     | exitmsg: OK
[2026-03-03 02:54:43] 2026-03-03 01:53:55,758 | INFO     | cpuconsumptiontime: 31186 s
[2026-03-03 02:54:43] 2026-03-03 01:53:55,758 | INFO     | nevents: 400
[2026-03-03 02:54:43] 2026-03-03 01:53:55,758 | INFO     | neventsw: 0
[2026-03-03 02:54:43] 2026-03-03 01:53:55,758 | INFO     | pid: 1828039
[2026-03-03 02:54:43] 2026-03-03 01:53:55,758 | INFO     | pgrp: 1828039
[2026-03-03 02:54:43] 2026-03-03 01:53:55,758 | INFO     | corecount: 12
[2026-03-03 02:54:43] 2026-03-03 01:53:55,758 | INFO     | event service: False
[2026-03-03 02:54:43] 2026-03-03 01:53:55,758 | INFO     | sizes: {0: 2281902, 1: 2282363, 11: 2282363, 2947: 2316864, 2950: 2316864, 2952: 2317090}
[2026-03-03 02:54:43] 2026-03-03 01:53:55,758 | INFO     | --------------------------------------------------
[2026-03-03 02:54:43] 2026-03-03 01:53:55,759 | INFO     | 
[2026-03-03 02:54:43] 2026-03-03 01:53:55,759 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-03-03 02:54:43] 2026-03-03 01:53:55,775 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,775 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,776 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,776 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,776 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,776 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,776 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,776 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,776 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,776 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,776 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,776 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,776 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,776 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,776 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,777 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,777 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,777 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 02:54:43] 2026-03-03 01:53:55,777 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,777 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 02:54:43] 2026-03-03 01:53:55,777 | INFO     | job 7035730688 has completed (purged errors)
[2026-03-03 02:54:43] 2026-03-03 01:53:55,777 | INFO     | overall cleanup function is called
[2026-03-03 02:54:43] 2026-03-03 01:53:56,785 | INFO     | --- collectZombieJob: --- 10, [1828039]
[2026-03-03 02:54:43] 2026-03-03 01:53:56,786 | INFO     | zombie collector waiting for pid 1828039
[2026-03-03 02:54:43] 2026-03-03 01:53:56,786 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 02:54:43] 2026-03-03 01:53:56,786 | INFO     | collected zombie processes
[2026-03-03 02:54:43] 2026-03-03 01:53:56,786 | INFO     | will attempt to kill all subprocesses of pid=1828039
[2026-03-03 02:54:43] 2026-03-03 01:53:56,878 | INFO     | process IDs to be killed: [1828039] (in reverse order)
[2026-03-03 02:54:43] 2026-03-03 01:53:56,917 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 02:54:43] 2026-03-03 01:53:56,917 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 02:54:43] 2026-03-03 01:53:56,920 | INFO     | did not find any defunct processes belonging to 1828039
[2026-03-03 02:54:43] 2026-03-03 01:53:56,923 | INFO     | did not find any defunct processes belonging to 1828039
[2026-03-03 02:54:43] 2026-03-03 01:53:56,923 | INFO     | ready for new job
[2026-03-03 02:54:43] 2026-03-03 01:53:56,923 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 02:54:43] 2026-03-03 01:53:56,924 | INFO     | **************************************
[2026-03-03 02:54:43] 2026-03-03 01:53:56,924 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 02:54:43] 2026-03-03 01:53:56,924 | INFO     | **************************************
[2026-03-03 02:54:43] 2026-03-03 01:53:56,924 | INFO     | 
[2026-03-03 02:54:43] 2026-03-03 01:53:56,925 | INFO     | architecture information:
[2026-03-03 02:54:43] 2026-03-03 01:53:56,926 | INFO     | executing command: cat /etc/os-release
[2026-03-03 02:54:43] 2026-03-03 01:53:56,937 | INFO     | cat /etc/os-release:
[2026-03-03 02:54:43] NAME="CentOS Linux"
[2026-03-03 02:54:43] VERSION="7 (Core)"
[2026-03-03 02:54:43] ID="centos"
[2026-03-03 02:54:43] ID_LIKE="rhel fedora"
[2026-03-03 02:54:43] VERSION_ID="7"
[2026-03-03 02:54:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 02:54:43] ANSI_COLOR="0;31"
[2026-03-03 02:54:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 02:54:43] HOME_URL="https://www.centos.org/"
[2026-03-03 02:54:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 02:54:43] 
[2026-03-03 02:54:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 02:54:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 02:54:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 02:54:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 02:54:43] 
[2026-03-03 02:54:43] 2026-03-03 01:53:56,937 | INFO     | **************************************
[2026-03-03 02:54:43] 2026-03-03 01:53:57,440 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-03-03 02:54:43] 2026-03-03 01:53:57,453 | INFO     | sufficient remaining disk space (40954232832 B)
[2026-03-03 02:54:43] 2026-03-03 01:53:57,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 02:54:43] 2026-03-03 01:53:57,453 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 02:54:43] 2026-03-03 01:53:57,453 | INFO     | update_server=False
[2026-03-03 02:54:43] 2026-03-03 01:53:57,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 02:54:43] 2026-03-03 01:53:57,453 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 02:54:43] 2026-03-03 01:53:57,453 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 02:54:43] 2026-03-03 01:53:57,922 | INFO     | all job control threads have been joined
[2026-03-03 02:54:43] 2026-03-03 01:53:57,982 | INFO     | all payload control threads have been joined
[2026-03-03 02:54:43] 2026-03-03 01:53:58,220 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 02:54:43] 2026-03-03 01:53:58,220 | INFO     | aborting loop
[2026-03-03 02:54:43] 2026-03-03 01:53:58,376 | INFO     | all data control threads have been joined
[2026-03-03 02:54:43] 2026-03-03 01:53:58,458 | INFO     | [job] retrieve thread has finished
[2026-03-03 02:54:43] 2026-03-03 01:53:58,459 | INFO     | [job] queue monitor thread has finished
[2026-03-03 02:54:43] 2026-03-03 01:53:58,918 | INFO     | [job] validate thread has finished
[2026-03-03 02:54:43] 2026-03-03 01:53:58,927 | INFO     | [job] control thread has finished
[2026-03-03 02:54:43] 2026-03-03 01:53:58,986 | INFO     | [payload] control thread has finished
[2026-03-03 02:54:43] 2026-03-03 01:53:59,042 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 02:54:43] 2026-03-03 01:53:59,074 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 02:54:43] 2026-03-03 01:53:59,226 | INFO     | [job] job monitor thread has finished
[2026-03-03 02:54:43] 2026-03-03 01:53:59,339 | INFO     | [data] copytool_in thread has finished
[2026-03-03 02:54:43] 2026-03-03 01:53:59,348 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 02:54:43] 2026-03-03 01:53:59,381 | INFO     | [data] control thread has finished
[2026-03-03 02:54:43] 2026-03-03 01:53:59,456 | INFO     | [payload] failed_post thread has finished
[2026-03-03 02:54:43] 2026-03-03 01:53:59,459 | INFO     | [data] copytool_out thread has finished
[2026-03-03 02:54:43] 2026-03-03 01:53:59,621 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 02:54:43] 2026-03-03 01:53:59,820 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 02:54:43] 2026-03-03 01:53:59,986 | INFO     | [payload] validate_post thread has finished
[2026-03-03 02:54:43] 2026-03-03 01:54:03,821 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 02:54:43] 2026-03-03 01:54:27,747 | INFO     | PID=1822661 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 02:54:43] 2026-03-03 01:54:27,747 | INFO     | .. there are 2 such processes running
[2026-03-03 02:54:43] 2026-03-03 01:54:27,747 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 02:54:43] 2026-03-03 01:54:27,747 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 02:54:43] 2026-03-03 01:54:27,747 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 02:54:43] 2026-03-03 01:54:37,308 | INFO     | [monitor] cgroup control has ended
[2026-03-03 02:54:43] 2026-03-03 01:54:38,572 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139856121399104)>', '<ExcThread(monitor, started 139855761741568)>']
[2026-03-03 02:54:43] 2026-03-03 01:54:38,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 02:54:43] 2026-03-03 01:54:38,791 | INFO     | [monitor] control thread has ended
[2026-03-03 02:54:43] 2026-03-03 01:54:43,597 | INFO     | all workflow threads have been joined
[2026-03-03 02:54:43] 2026-03-03 01:54:43,597 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 02:54:43] 2026-03-03 01:54:43,597 | INFO     | traces error code: 0
[2026-03-03 02:54:43] 2026-03-03 01:54:43,597 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 02:54:43] 2026-03-03 01:54:43,663 [wrapper] ==== pilot stdout END ====
[2026-03-03 02:54:43] 2026-03-03 01:54:43,665 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 02:54:43] 2026-03-03 01:54:43,667 [wrapper] pilotpid: 1822661
[2026-03-03 02:54:43] 2026-03-03 01:54:43,669 [wrapper] Pilot exit status: 0
[2026-03-03 02:54:43] 2026-03-03 01:54:43,677 [wrapper] pandaids: 7035730688
[2026-03-03 02:54:43] 2026-03-03 01:54:43,704 [wrapper] cleanup supervisor_pilot 1869499 1822662
[2026-03-03 02:54:43] 2026-03-03 01:54:43,706 [wrapper] Test setup, not cleaning
[2026-03-03 02:54:43] 2026-03-03 01:54:43,708 [wrapper] apfmon messages muted
[2026-03-03 02:54:43] 2026-03-03 01:54:43,710 [wrapper] ==== wrapper stdout END ====
[2026-03-03 02:54:43] 2026-03-03 01:54:43,711 [wrapper] ==== wrapper stderr END ====
[2026-03-03 02:54:43]  *** Error codes and diagnostics ***
[2026-03-03 02:54:43]     "exeErrorCode": 0,
[2026-03-03 02:54:43]     "exeErrorDiag": "",
[2026-03-03 02:54:43]     "pilotErrorCode": 0,
[2026-03-03 02:54:43]     "pilotErrorDiag": "",
[2026-03-03 02:54:43]  *** Listing of results directory ***
[2026-03-03 02:54:43] total 402888
[2026-03-03 02:54:43] -rw-r--r-- 1 boinc boinc    584627 Mar  2 03:17 pilot3.tar.gz
[2026-03-03 02:54:43] -rwx------ 1 boinc boinc     36322 Mar  2 03:20 runpilot2-wrapper.sh
[2026-03-03 02:54:43] -rw-r--r-- 1 boinc boinc      5111 Mar  2 03:21 queuedata.json
[2026-03-03 02:54:43] -rw-r--r-- 1 boinc boinc       100 Mar  3 02:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 02:54:43] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 02:03 run_atlas
[2026-03-03 02:54:43] -rw-r--r-- 1 boinc boinc       105 Mar  3 02:03 job.xml
[2026-03-03 02:54:43] -rw-r--r-- 1 boinc boinc      9458 Mar  3 02:03 init_data.xml
[2026-03-03 02:54:43] -rw-r--r-- 2 boinc boinc 230095515 Mar  3 02:03 EVNT.48449058._000002.pool.root.1
[2026-03-03 02:54:43] -rw-r--r-- 2 boinc boinc     15845 Mar  3 02:03 start_atlas.sh
[2026-03-03 02:54:43] drwxrwx--x 2 boinc boinc      4096 Mar  3 02:03 shared
[2026-03-03 02:54:43] -rw-r--r-- 2 boinc boinc    597959 Mar  3 02:03 input.tar.gz
[2026-03-03 02:54:43] -rw-r--r-- 1 boinc boinc         0 Mar  3 02:03 boinc_lockfile
[2026-03-03 02:54:43] -rw-r--r-- 1 boinc boinc      2609 Mar  3 02:03 pandaJob.out
[2026-03-03 02:54:43] -rw------- 1 boinc boinc    997714 Mar  3 02:03 agis_schedconf.cvmfs.json
[2026-03-03 02:54:43] -rw------- 1 boinc boinc   1512931 Mar  3 02:04 agis_ddmendpoints.agis.ALL.json
[2026-03-03 02:54:43] -rw------- 1 boinc boinc       432 Mar  3 02:04 workernode_map.json
[2026-03-03 02:54:43] drwx------ 5 boinc boinc      4096 Mar  3 02:04 pilot3
[2026-03-03 02:54:43] -rw------- 1 boinc boinc 176879391 Mar  3 02:53 HITS.48844739._000041.pool.root.1
[2026-03-03 02:54:43] -rw-r--r-- 1 boinc boinc       530 Mar  3 02:53 boinc_task_state.xml
[2026-03-03 02:54:43] -rw------- 1 boinc boinc      1019 Mar  3 02:53 memory_monitor_summary.json
[2026-03-03 02:54:43] -rw------- 1 boinc boinc    366145 Mar  3 02:53 log.48844739._000041.job.log.tgz.1
[2026-03-03 02:54:43] -rw------- 1 boinc boinc      6319 Mar  3 02:53 heartbeat.json
[2026-03-03 02:54:43] -rw------- 1 boinc boinc        95 Mar  3 02:54 pilot_heartbeat.json
[2026-03-03 02:54:43] -rw-r--r-- 1 boinc boinc      8192 Mar  3 02:54 boinc_mmap_file
[2026-03-03 02:54:43] -rw-r--r-- 1 boinc boinc        27 Mar  3 02:54 wrapper_checkpoint.txt
[2026-03-03 02:54:43] -rw------- 1 boinc boinc      4819 Mar  3 02:54 pilotlog.txt
[2026-03-03 02:54:43] -rw------- 1 boinc boinc    460545 Mar  3 02:54 log.48844739._000041.job.log.1
[2026-03-03 02:54:43] -rw------- 1 boinc boinc       357 Mar  3 02:54 output.list
[2026-03-03 02:54:43] -rw-r--r-- 1 boinc boinc       620 Mar  3 02:54 runtime_log
[2026-03-03 02:54:43] -rw------- 1 boinc boinc    839680 Mar  3 02:54 result.tar.gz
[2026-03-03 02:54:43] -rw------- 1 boinc boinc       658 Mar  3 02:54 iawKDmk47G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmzKCLDmObtjHo.diag
[2026-03-03 02:54:43] -rw-r--r-- 1 boinc boinc      8853 Mar  3 02:54 runtime_log.err
[2026-03-03 02:54:43] -rw-r--r-- 1 boinc boinc     21583 Mar  3 02:54 stderr.txt
[2026-03-03 02:54:43] HITS file was successfully produced:
[2026-03-03 02:54:43] -rw------- 1 boinc boinc 176879391 Mar  3 02:53 shared/HITS.pool.root.1
[2026-03-03 02:54:43]  *** Contents of shared directory: ***
[2026-03-03 02:54:43] total 398868
[2026-03-03 02:54:43] -rw-r--r-- 2 boinc boinc 230095515 Mar  3 02:03 ATLAS.root_0
[2026-03-03 02:54:43] -rw-r--r-- 2 boinc boinc     15845 Mar  3 02:03 start_atlas.sh
[2026-03-03 02:54:43] -rw-r--r-- 2 boinc boinc    597959 Mar  3 02:03 input.tar.gz
[2026-03-03 02:54:43] -rw------- 1 boinc boinc 176879391 Mar  3 02:53 HITS.pool.root.1
[2026-03-03 02:54:43] -rw------- 1 boinc boinc    839680 Mar  3 02:54 result.tar.gz
02:54:45 (1818798): run_atlas exited; CPU time 31210.670406
02:54:45 (1818798): called boinc_finish(0)

</stderr_txt>
]]>

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