Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-03 13:02:57 (8112): vboxwrapper version 26210
2026-03-03 13:02:57 (8112): BOINC client version: 8.0.2
2026-03-03 13:02:58 (8112): Detected: VirtualBox VboxManage Interface (Version: 6.1.28)
2026-03-03 13:02:58 (8112): Successfully copied 'init_data.xml' to the shared directory.
2026-03-03 13:02:58 (8112): Create VM. (boinc_74e9e0d5b4b384f6, slot#0)
2026-03-03 13:02:59 (8112): Setting Memory Size for VM. (5400MB)
2026-03-03 13:02:59 (8112): Setting CPU Count for VM. (2)
2026-03-03 13:03:00 (8112): Setting Chipset Options for VM.
2026-03-03 13:03:00 (8112): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-03 13:03:00 (8112): Setting Boot Options for VM.
2026-03-03 13:03:01 (8112): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-03 13:03:01 (8112): Enabling VM Network Access.
2026-03-03 13:03:01 (8112): Disabling USB Support for VM.
2026-03-03 13:03:01 (8112): Disabling COM Port Support for VM.
2026-03-03 13:03:02 (8112): Disabling LPT Port Support for VM.
2026-03-03 13:03:02 (8112): Disabling Audio Support for VM.
2026-03-03 13:03:02 (8112): Disabling Clipboard Support for VM.
2026-03-03 13:03:03 (8112): Disabling Drag and Drop Support for VM.
2026-03-03 13:03:03 (8112): Adding storage controller(s) to VM.
2026-03-03 13:03:03 (8112): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-03 13:03:04 (8112): Adding VirtualBox Guest Additions to VM.
2026-03-03 13:03:05 (8112): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-03 13:03:05 (8112): forwarding host port 56455 to guest port 80
2026-03-03 13:03:05 (8112): Enabling remote desktop for VM.
2026-03-03 13:03:06 (8112): Enabling shared directory for VM.
2026-03-03 13:03:06 (8112): Starting VM using VBoxManage interface. (boinc_74e9e0d5b4b384f6, slot#0)
2026-03-03 13:03:13 (8112): Successfully started VM. (PID = '5368')
2026-03-03 13:03:13 (8112): Reporting VM Process ID to BOINC.
2026-03-03 13:03:13 (8112): Guest Log: BIOS: VirtualBox 6.1.28
2026-03-03 13:03:13 (8112): Guest Log: CPUID EDX: 0x178bfbff
2026-03-03 13:03:13 (8112): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-03 13:03:13 (8112): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-03 13:03:13 (8112): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-03 13:03:13 (8112): Detected: Web Application Enabled (http://localhost:56455)
2026-03-03 13:03:13 (8112): Detected: Remote Desktop Enabled (localhost:56456)
2026-03-03 13:03:13 (8112): Preference change detected
2026-03-03 13:03:13 (8112): Setting CPU throttle for VM. (100%)
2026-03-03 13:03:13 (8112): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-03 13:03:15 (8112): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-03 13:03:15 (8112): Guest Log: BIOS: Booting from Hard Disk...
2026-03-03 13:03:18 (8112): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-03 13:03:18 (8112): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-03 13:03:18 (8112): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-03 13:03:27 (8112): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-03 13:03:27 (8112): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-03 13:03:40 (8112): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-03 13:03:40 (8112): Guest Log: 00:00:00.000243 main     Log opened 2026-03-03T13:03:37.920081000Z
2026-03-03 13:03:40 (8112): Guest Log: 00:00:00.000378 main     OS Product: Linux
2026-03-03 13:03:40 (8112): Guest Log: 00:00:00.000431 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-03 13:03:40 (8112): Guest Log: 00:00:00.000476 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-03 13:03:40 (8112): Guest Log: 00:00:00.000521 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-03 13:03:40 (8112): Guest Log: 00:00:00.000523 main     Process ID: 1308
2026-03-03 13:03:40 (8112): Guest Log: 00:00:00.000525 main     Package type: LINUX_64BITS_GENERIC
2026-03-03 13:03:40 (8112): Guest Log: 00:00:00.002716 main     5.2.32 r132073 started. Verbose level = 0
2026-03-03 13:03:40 (8112): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-03 13:03:40 (8112): Guest Log: [INFO] Mounting shared directory
2026-03-03 13:03:40 (8112): Guest Log: [INFO] Checking for init_data.xml
2026-03-03 13:03:45 (8112): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-03 13:03:45 (8112): Guest Log: [INFO] Detected branch: prod
2026-03-03 13:03:45 (8112): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-03 13:03:45 (8112): Guest Log: Copying input files
2026-03-03 13:03:49 (8112): Guest Log: Copied input files into RunAtlas.
2026-03-03 13:03:49 (8112): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2026-03-03 13:03:49 (8112): Guest Log: 00:00:10.007355 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 535 893 000ns (GuestNow=1 772 539 429 390 578 000 ns GuestLast=1 772 543 017 926 471 000 ns fSetTimeLastLoop=true )
2026-03-03 13:03:58 (8112): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-03 13:03:58 (8112): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-03 13:03:58 (8112): Guest Log: 2.6.3.0 1585 0 31696 156844 3 1 3120742 4096001 0 65024 0 0 n/a 1336 1762 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2026-03-03 13:03:59 (8112): Guest Log: copied the webapp to /var/www
2026-03-03 13:03:59 (8112): Guest Log: ATHENA_PROC_NUMBER=2
2026-03-03 13:03:59 (8112): Guest Log: ATHENA_CORE_NUMBER=2
2026-03-03 13:03:59 (8112): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-03 13:03:59 (8112): Guest Log:  *** Starting ATLAS job. (PandaID=7035863835 taskID=48838462) ***
2026-03-03 14:43:19 (8112): Status Report: Elapsed Time: '6000.000000'
2026-03-03 14:43:19 (8112): Status Report: CPU Time: '11198.234375'
2026-03-03 16:23:29 (8112): Status Report: Elapsed Time: '12000.000000'
2026-03-03 16:23:29 (8112): Status Report: CPU Time: '23153.390625'
2026-03-03 18:03:35 (8112): Status Report: Elapsed Time: '18000.000000'
2026-03-03 18:03:35 (8112): Status Report: CPU Time: '35100.796875'
2026-03-03 19:43:40 (8112): Status Report: Elapsed Time: '24000.000000'
2026-03-03 19:43:40 (8112): Status Report: CPU Time: '47049.312500'
2026-03-03 21:23:48 (8112): Status Report: Elapsed Time: '30000.000000'
2026-03-03 21:23:48 (8112): Status Report: CPU Time: '59003.843750'
2026-03-03 23:03:54 (8112): Status Report: Elapsed Time: '36000.000000'
2026-03-03 23:03:54 (8112): Status Report: CPU Time: '70953.546875'
2026-03-04 00:44:02 (8112): Status Report: Elapsed Time: '42000.000000'
2026-03-04 00:44:02 (8112): Status Report: CPU Time: '82907.093750'
2026-03-04 02:24:11 (8112): Status Report: Elapsed Time: '48000.000000'
2026-03-04 02:24:11 (8112): Status Report: CPU Time: '94848.796875'
2026-03-04 03:21:02 (8112): Guest Log:  *** Job finished ***
2026-03-04 03:21:02 (8112): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:53,796 | INFO     | PID=5967 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:53,797 | INFO     | found 0 job(s) in 20 queues
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:53,797 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:53,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:53,797 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:53,797 | INFO     | [monitor] control thread has ended
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:58,709 | INFO     | all workflow threads have been joined
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:58,710 | INFO     | end of generic workflow (traces error code: 0)
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:58,711 | INFO     | traces error code: 0
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:58,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:58,870 [wrapper] ==== pilot stdout END ====
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:58,876 [wrapper] ==== wrapper stdout RESUME ====
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:58,882 [wrapper] pilotpid: 5967
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:58,889 [wrapper] Pilot exit status: 0
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:58,924 [wrapper] pandaids: 7035863835
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:58,972 [wrapper] cleanup supervisor_pilot  7230 5968
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:58,979 [wrapper] Test setup, not cleaning
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:58,985 [wrapper] apfmon messages muted
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:58,992 [wrapper] ==== wrapper stdout END ====
2026-03-04 03:21:02 (8112): Guest Log: 2026-03-04 02:20:58,997 [wrapper] ==== wrapper stderr END ====
2026-03-04 03:21:02 (8112): Guest Log:  *** Error codes and diagnostics ***
2026-03-04 03:21:02 (8112): Guest Log:     "exeErrorCode": 0,
2026-03-04 03:21:02 (8112): Guest Log:     "exeErrorDiag": "",
2026-03-04 03:21:02 (8112): Guest Log:     "pilotErrorCode": 0,
2026-03-04 03:21:02 (8112): Guest Log:     "pilotErrorDiag": "",
2026-03-04 03:21:02 (8112): Guest Log:  *** Listing of results directory ***
2026-03-04 03:21:02 (8112): Guest Log: total 221484
2026-03-04 03:21:02 (8112): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  2 07:34 runpilot2-wrapper.sh
2026-03-04 03:21:02 (8112): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  2 07:34 queuedata.json
2026-03-04 03:21:02 (8112): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  2 07:34 pilot3.tar.gz
2026-03-04 03:21:02 (8112): Guest Log: -rwxr-xr-x. 1 atlas atlas     10971 Mar  3 12:03 init_data.xml
2026-03-04 03:21:02 (8112): Guest Log: -rwxr-xr-x. 1 atlas atlas    597945 Mar  3 12:03 input.tar.gz
2026-03-04 03:21:02 (8112): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  3 12:03 start_atlas.sh
2026-03-04 03:21:02 (8112): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  3 12:03 EVNT.48220133._000233.pool.root.1 -> /data/./ATLAS.root_0
2026-03-04 03:21:02 (8112): Guest Log: -rw-r--r--. 1 atlas atlas      2562 Mar  3 12:03 pandaJob.out
2026-03-04 03:21:02 (8112): Guest Log: -rw-------. 1 atlas atlas        49 Mar  3 12:04 setup.sh.local
2026-03-04 03:21:02 (8112): Guest Log: -rw-------. 1 atlas atlas    998442 Mar  3 12:04 agis_schedconf.cvmfs.json
2026-03-04 03:21:02 (8112): Guest Log: -rw-------. 1 atlas atlas       427 Mar  3 12:04 workernode_map.json
2026-03-04 03:21:02 (8112): Guest Log: drwx------. 5 atlas atlas      4096 Mar  3 12:05 pilot3
2026-03-04 03:21:02 (8112): Guest Log: -rw-------. 1 atlas atlas 207153636 Mar  4 02:19 HITS.48838462._005457.pool.root.1
2026-03-04 03:21:02 (8112): Guest Log: -rw-------. 1 atlas atlas      1025 Mar  4 02:20 memory_monitor_summary.json
2026-03-04 03:21:02 (8112): Guest Log: -rw-------. 1 atlas atlas   1516092 Mar  4 02:20 agis_ddmendpoints.agis.ALL.json
2026-03-04 03:21:02 (8112): Guest Log: -rw-------. 1 atlas atlas    868714 Mar  4 02:20 log.48838462._005457.job.log.tgz.1
2026-03-04 03:21:02 (8112): Guest Log: -rw-------. 1 atlas atlas      6370 Mar  4 02:20 heartbeat.json
2026-03-04 03:21:02 (8112): Guest Log: -rw-------. 1 atlas atlas        95 Mar  4 02:20 pilot_heartbeat.json
2026-03-04 03:21:02 (8112): Guest Log: -rw-------. 1 atlas atlas      4801 Mar  4 02:20 pilotlog.txt
2026-03-04 03:21:02 (8112): Guest Log: -rw-------. 1 atlas atlas   7022820 Mar  4 02:20 log.48838462._005457.job.log.1
2026-03-04 03:21:02 (8112): Guest Log: -rw-------. 1 atlas atlas       357 Mar  4 02:20 output.list
2026-03-04 03:21:02 (8112): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  4 02:20 runtime_log
2026-03-04 03:21:02 (8112): Guest Log: -rw-------. 1 atlas atlas   7905280 Mar  4 02:20 result.tar.gz
2026-03-04 03:21:02 (8112): Guest Log: -rw-r--r--. 1 atlas atlas      9224 Mar  4 02:20 runtime_log.err
2026-03-04 03:21:02 (8112): Guest Log: -rw-------. 1 atlas atlas       656 Mar  4 02:20 8zjMDmRyCH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmlqCLDmdadhJo.diag
2026-03-04 03:21:02 (8112): Guest Log: Looking for outputfile HITS.48838462._005457.pool.root.1
2026-03-04 03:21:02 (8112): Guest Log: HITS file was successfully produced
2026-03-04 03:21:02 (8112): Guest Log: -rw-------. 1 atlas atlas 207153636 Mar  4 02:19 /home/atlas/RunAtlas/HITS.48838462._005457.pool.root.1
2026-03-04 03:21:04 (8112): Guest Log: Successfully finished the ATLAS job!
2026-03-04 03:21:04 (8112): Guest Log: Copying the results back to the shared directory!
2026-03-04 03:21:04 (8112): Guest Log:  *** Contents of shared directory: ***
2026-03-04 03:21:04 (8112): Guest Log: total 480420
2026-03-04 03:21:04 (8112): Guest Log: -rwxrwxrwx. 1 root root 276260590 Mar  3 12:02 ATLAS.root_0
2026-03-04 03:21:04 (8112): Guest Log: -rwxrwxrwx. 1 root root 207153636 Mar  4 02:21 HITS.pool.root.1
2026-03-04 03:21:04 (8112): Guest Log: -rwxrwxrwx. 1 root root     10971 Mar  3 12:02 init_data.xml
2026-03-04 03:21:04 (8112): Guest Log: -rwxrwxrwx. 1 root root    597945 Mar  2 11:24 input.tar.gz
2026-03-04 03:21:04 (8112): Guest Log: -rwxrwxrwx. 1 root root   7905280 Mar  4 02:21 result.tar.gz
2026-03-04 03:21:04 (8112): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  2 11:24 start_atlas.sh
2026-03-04 03:21:04 (8112): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-04 03:21:04 (8112): VM Completion File Detected.
2026-03-04 03:21:04 (8112): Powering off VM.
2026-03-04 03:21:05 (8112): Successfully stopped VM.
2026-03-04 03:21:05 (8112): Deregistering VM. (boinc_74e9e0d5b4b384f6, slot#0)
2026-03-04 03:21:05 (8112): Removing network bandwidth throttle group from VM.
2026-03-04 03:21:05 (8112): Removing VM from VirtualBox.
2026-03-04 03:21:11 (8112): called boinc_finish(0)

</stderr_txt>
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