Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-02 08:04:15 (42564): vboxwrapper version 26210
2026-03-02 08:04:15 (42564): BOINC client version: 8.0.2
2026-03-02 08:04:16 (42564): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-03-02 08:04:16 (42564): Successfully copied 'init_data.xml' to the shared directory.
2026-03-02 08:04:17 (42564): Create VM. (boinc_e4fd34b00b680eff, slot#9)
2026-03-02 08:04:19 (42564): Setting Memory Size for VM. (4800MB)
2026-03-02 08:04:20 (42564): Setting CPU Count for VM. (8)
2026-03-02 08:04:20 (42564): Setting Chipset Options for VM.
2026-03-02 08:04:21 (42564): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-02 08:04:22 (42564): Setting Boot Options for VM.
2026-03-02 08:04:23 (42564): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-02 08:04:24 (42564): Enabling VM Network Access.
2026-03-02 08:04:24 (42564): Disabling USB Support for VM.
2026-03-02 08:04:25 (42564): Disabling COM Port Support for VM.
2026-03-02 08:04:25 (42564): Disabling LPT Port Support for VM.
2026-03-02 08:04:26 (42564): Disabling Audio Support for VM.
2026-03-02 08:04:27 (42564): Disabling Clipboard Support for VM.
2026-03-02 08:04:28 (42564): Disabling Drag and Drop Support for VM.
2026-03-02 08:04:28 (42564): Adding storage controller(s) to VM.
2026-03-02 08:04:29 (42564): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-02 08:04:34 (42564): Adding VirtualBox Guest Additions to VM.
2026-03-02 08:04:34 (42564): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-02 08:04:35 (42564): forwarding host port 58073 to guest port 80
2026-03-02 08:04:36 (42564): Enabling remote desktop for VM.
2026-03-02 08:04:37 (42564): Enabling shared directory for VM.
2026-03-02 08:04:39 (42564): Starting VM using VBoxManage interface. (boinc_e4fd34b00b680eff, slot#9)
2026-03-02 08:04:50 (42564): Successfully started VM. (PID = '26604')
2026-03-02 08:04:50 (42564): Reporting VM Process ID to BOINC.
2026-03-02 08:04:50 (42564): Guest Log: BIOS: VirtualBox 7.2.4
2026-03-02 08:04:50 (42564): Guest Log: CPUID EDX: 0x178bfbff
2026-03-02 08:04:50 (42564): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-02 08:04:50 (42564): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-02 08:04:50 (42564): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-02 08:04:50 (42564): Detected: Web Application Enabled (http://localhost:58073)
2026-03-02 08:04:50 (42564): Detected: Remote Desktop Enabled (localhost:58074)
2026-03-02 08:04:50 (42564): Preference change detected
2026-03-02 08:04:50 (42564): Setting CPU throttle for VM. (100%)
2026-03-02 08:04:51 (42564): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-02 08:04:53 (42564): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-02 08:04:53 (42564): Guest Log: BIOS: Booting from Hard Disk...
2026-03-02 08:04:55 (42564): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-02 08:04:55 (42564): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-02 08:04:55 (42564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-02 08:04:56 (42564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-02 08:04:56 (42564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-02 08:04:56 (42564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-02 08:04:56 (42564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-02 08:04:56 (42564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-02 08:04:56 (42564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-02 08:04:56 (42564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-02 08:04:56 (42564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-02 08:04:56 (42564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-02 08:04:56 (42564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-02 08:05:01 (42564): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-02 08:05:01 (42564): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-02 08:05:13 (42564): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-02 08:05:13 (42564): Guest Log: 00:00:00.000231 main     Log opened 2026-03-02T08:05:10.712818000Z
2026-03-02 08:05:13 (42564): Guest Log: 00:00:00.000413 main     OS Product: Linux
2026-03-02 08:05:13 (42564): Guest Log: 00:00:00.000466 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-02 08:05:13 (42564): Guest Log: 00:00:00.000508 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-02 08:05:13 (42564): Guest Log: 00:00:00.000549 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-02 08:05:13 (42564): Guest Log: 00:00:00.000551 main     Process ID: 1373
2026-03-02 08:05:13 (42564): Guest Log: 00:00:00.000551 main     Package type: LINUX_64BITS_GENERIC
2026-03-02 08:05:13 (42564): Guest Log: 00:00:00.001712 main     5.2.32 r132073 started. Verbose level = 0
2026-03-02 08:05:13 (42564): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-02 08:05:13 (42564): Guest Log: [INFO] Mounting shared directory
2026-03-02 08:05:13 (42564): Guest Log: [INFO] Checking for init_data.xml
2026-03-02 08:05:20 (42564): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-02 08:05:20 (42564): Guest Log: [INFO] Detected branch: prod
2026-03-02 08:05:20 (42564): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-02 08:05:20 (42564): Guest Log: Copying input files
2026-03-02 08:05:22 (42564): Guest Log: 00:00:10.005267 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 640 591 000ns (GuestNow=1 772 460 322 358 201 000 ns GuestLast=1 772 438 710 717 610 000 ns fSetTimeLastLoop=true )
2026-03-02 08:05:24 (42564): Guest Log: Copied input files into RunAtlas.
2026-03-02 08:05:24 (42564): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-02 08:05:24 (42564): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-02 08:05:24 (42564): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-02 08:05:24 (42564): Guest Log: Further information can be found at the LHC@home message board.
2026-03-02 08:05:36 (42564): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-02 08:05:37 (42564): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-02 08:05:37 (42564): Guest Log: 2.6.3.0 1654 0 30180 156808 3 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-02 08:05:40 (42564): Guest Log: copied the webapp to /var/www
2026-03-02 08:05:40 (42564): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-02 08:05:40 (42564): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-02 08:05:40 (42564): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-02 08:05:40 (42564): Guest Log:  *** Starting ATLAS job. (PandaID=7035930058 taskID=48846156) ***
2026-03-02 10:08:51 (42564): Status Report: Elapsed Time: '6000.355740'
2026-03-02 10:08:51 (42564): Status Report: CPU Time: '49139.031250'
2026-03-02 12:16:31 (42564): Status Report: Elapsed Time: '12000.833714'
2026-03-02 12:16:31 (42564): Status Report: CPU Time: '106826.703125'
2026-03-02 12:24:21 (42564): VM state change detected. (old = 'running', new = 'paused')
2026-03-02 14:36:26 (42564): VM state change detected. (old = 'paused', new = 'running')
2026-03-02 14:36:30 (42564): Guest Log: 04:19:12.874051 timesync vgsvcTimeSyncWorker: Radical host time change: 7 933 818 000 000ns (HostNow=1 772 483 789 032 000 000 ns HostLast=1 772 475 855 214 000 000 ns)
2026-03-02 14:36:39 (42564): Guest Log: 04:19:22.961827 timesync vgsvcTimeSyncWorker: Radical guest time change: 7 933 893 344 000ns (GuestNow=1 772 483 799 119 921 000 ns GuestLast=1 772 475 865 226 577 000 ns fSetTimeLastLoop=true )
2026-03-02 15:09:41 (42564): Guest Log:  *** Job finished ***
2026-03-02 15:09:41 (42564): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:20,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:20,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:31,992 | INFO     | [monitor] cgroup control has ended
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:33,865 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140122431444800)>', '<ExcThread(monitor, started 140121672238848)>']
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:33,889 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:33,890 | INFO     | [monitor] control thread has ended
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:38,912 | INFO     | all workflow threads have been joined
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:38,914 | INFO     | end of generic workflow (traces error code: 0)
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:38,917 | INFO     | traces error code: 0
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:38,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:39,287 [wrapper] ==== pilot stdout END ====
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:39,310 [wrapper] ==== wrapper stdout RESUME ====
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:39,319 [wrapper] pilotpid: 6097
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:39,346 [wrapper] Pilot exit status: 0
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:39,533 [wrapper] pandaids: 7035930058
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:39,584 [wrapper] cleanup supervisor_pilot 29547 6098
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:39,600 [wrapper] Test setup, not cleaning
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:39,611 [wrapper] apfmon messages muted
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:39,620 [wrapper] ==== wrapper stdout END ====
2026-03-02 15:09:41 (42564): Guest Log: 2026-03-02 21:09:39,644 [wrapper] ==== wrapper stderr END ====
2026-03-02 15:09:41 (42564): Guest Log:  *** Error codes and diagnostics ***
2026-03-02 15:09:41 (42564): Guest Log:     "exeErrorCode": 0,
2026-03-02 15:09:41 (42564): Guest Log:     "exeErrorDiag": "",
2026-03-02 15:09:41 (42564): Guest Log:     "pilotErrorCode": 0,
2026-03-02 15:09:41 (42564): Guest Log:     "pilotErrorDiag": "",
2026-03-02 15:09:41 (42564): Guest Log:  *** Listing of results directory ***
2026-03-02 15:09:41 (42564): Guest Log: total 270476
2026-03-02 15:09:41 (42564): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  2 10:57 queuedata.json
2026-03-02 15:09:41 (42564): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  2 10:57 pilot3.tar.gz
2026-03-02 15:09:41 (42564): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  2 10:58 runpilot2-wrapper.sh
2026-03-02 15:09:41 (42564): Guest Log: -rwxr-xr-x. 1 atlas atlas     12096 Mar  2 14:05 init_data.xml
2026-03-02 15:09:41 (42564): Guest Log: -rwxr-xr-x. 1 atlas atlas    597960 Mar  2 14:05 input.tar.gz
2026-03-02 15:09:41 (42564): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  2 14:05 start_atlas.sh
2026-03-02 15:09:41 (42564): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  2 14:05 EVNT.48451371._000002.pool.root.1 -> /data/./ATLAS.root_0
2026-03-02 15:09:41 (42564): Guest Log: -rw-r--r--. 1 atlas atlas      2606 Mar  2 14:05 pandaJob.out
2026-03-02 15:09:41 (42564): Guest Log: -rw-------. 1 atlas atlas    998143 Mar  2 14:06 agis_schedconf.cvmfs.json
2026-03-02 15:09:41 (42564): Guest Log: -rw-------. 1 atlas atlas       427 Mar  2 14:07 workernode_map.json
2026-03-02 15:09:41 (42564): Guest Log: drwx------. 5 atlas atlas      4096 Mar  2 14:07 pilot3
2026-03-02 15:09:41 (42564): Guest Log: -rw-------. 1 atlas atlas 267289302 Mar  2 21:07 HITS.48846156._000038.pool.root.1
2026-03-02 15:09:41 (42564): Guest Log: -rw-------. 1 atlas atlas      1033 Mar  2 21:08 memory_monitor_summary.json
2026-03-02 15:09:41 (42564): Guest Log: -rw-------. 1 atlas atlas   1512931 Mar  2 21:08 agis_ddmendpoints.agis.ALL.json
2026-03-02 15:09:41 (42564): Guest Log: -rw-------. 1 atlas atlas    507615 Mar  2 21:08 log.48846156._000038.job.log.tgz.1
2026-03-02 15:09:41 (42564): Guest Log: -rw-------. 1 atlas atlas      6376 Mar  2 21:08 heartbeat.json
2026-03-02 15:09:41 (42564): Guest Log: -rw-------. 1 atlas atlas        97 Mar  2 21:09 pilot_heartbeat.json
2026-03-02 15:09:41 (42564): Guest Log: -rw-------. 1 atlas atlas      4989 Mar  2 21:09 pilotlog.txt
2026-03-02 15:09:41 (42564): Guest Log: -rw-------. 1 atlas atlas   2403634 Mar  2 21:09 log.48846156._000038.job.log.1
2026-03-02 15:09:41 (42564): Guest Log: -rw-------. 1 atlas atlas       357 Mar  2 21:09 output.list
2026-03-02 15:09:41 (42564): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  2 21:09 runtime_log
2026-03-02 15:09:41 (42564): Guest Log: -rw-------. 1 atlas atlas   2928640 Mar  2 21:09 result.tar.gz
2026-03-02 15:09:41 (42564): Guest Log: -rw-r--r--. 1 atlas atlas      8746 Mar  2 21:09 runtime_log.err
2026-03-02 15:09:41 (42564): Guest Log: -rw-------. 1 atlas atlas       658 Mar  2 21:09 GkjLDmY9FH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmiDBLDmO7xd9m.diag
2026-03-02 15:09:41 (42564): Guest Log: Looking for outputfile HITS.48846156._000038.pool.root.1
2026-03-02 15:09:41 (42564): Guest Log: HITS file was successfully produced
2026-03-02 15:09:41 (42564): Guest Log: -rw-------. 1 atlas atlas 267289302 Mar  2 21:07 /home/atlas/RunAtlas/HITS.48846156._000038.pool.root.1
2026-03-02 15:09:44 (42564): Guest Log: Successfully finished the ATLAS job!
2026-03-02 15:09:44 (42564): Guest Log: Copying the results back to the shared directory!
2026-03-02 15:09:44 (42564): Guest Log:  *** Contents of shared directory: ***
2026-03-02 15:09:44 (42564): Guest Log: total 550812
2026-03-02 15:09:44 (42564): Guest Log: -rwxrwxrwx. 1 root root 293180312 Mar  2 14:04 ATLAS.root_0
2026-03-02 15:09:44 (42564): Guest Log: -rwxrwxrwx. 1 root root 267289302 Mar  2 21:09 HITS.pool.root.1
2026-03-02 15:09:44 (42564): Guest Log: -rwxrwxrwx. 1 root root     12096 Mar  2 14:04 init_data.xml
2026-03-02 15:09:44 (42564): Guest Log: -rwxrwxrwx. 1 root root    597960 Mar  2 14:04 input.tar.gz
2026-03-02 15:09:44 (42564): Guest Log: -rwxrwxrwx. 1 root root   2928640 Mar  2 21:09 result.tar.gz
2026-03-02 15:09:44 (42564): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  2 14:04 start_atlas.sh
2026-03-02 15:09:44 (42564): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-02 15:09:44 (42564): VM Completion File Detected.
2026-03-02 15:09:44 (42564): Powering off VM.
2026-03-02 15:09:46 (42564): Successfully stopped VM.
2026-03-02 15:09:46 (42564): Deregistering VM. (boinc_e4fd34b00b680eff, slot#9)
2026-03-02 15:09:46 (42564): Removing network bandwidth throttle group from VM.
2026-03-02 15:09:47 (42564): Removing VM from VirtualBox.
2026-03-02 15:09:52 (42564): called boinc_finish(0)

</stderr_txt>
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