Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:56:01 (3638875): wrapper (7.7.26015): starting
17:56:01 (3638875): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 17:56:01] Arguments: --nthreads 4
[2026-03-02 17:56:01] Threads: 4
[2026-03-02 17:56:01] Checking for CVMFS
[2026-03-02 17:56:01] No cvmfs_config command found, will try listing directly
[2026-03-02 17:56:01] CVMFS is ok
[2026-03-02 17:56:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 17:56:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 17:56:01] Further information can be found at the LHC@home message board.
[2026-03-02 17:56:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 17:56:01] Checking for apptainer binary...
[2026-03-02 17:56:01] which: no apptainer in ((null))
[2026-03-02 17:56:01] apptainer is not installed, using version from CVMFS
[2026-03-02 17:56:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 17:56:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2026-03-02 17:56:01] apptainer works
[2026-03-02 17:56:01] Set ATHENA_PROC_NUMBER=4
[2026-03-02 17:56:01] Set ATHENA_CORE_NUMBER=4
[2026-03-02 17:56:01] Starting ATLAS job with PandaID=7035850059
[2026-03-02 17:56:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 21:57:51]  *** The last 200 lines of the pilot log: ***
[2026-03-02 21:57:51] 2026-03-02 20:57:06,412 | INFO     | fitting pss+swap vs Time
[2026-03-02 21:57:51] 2026-03-02 20:57:06,412 | INFO     | sum of square deviations: 4127772278.0
[2026-03-02 21:57:51] 2026-03-02 20:57:06,414 | INFO     | sum of deviations: 17795969627.0
[2026-03-02 21:57:51] 2026-03-02 20:57:06,414 | INFO     | mean x: 1772477801.0
[2026-03-02 21:57:51] 2026-03-02 20:57:06,414 | INFO     | mean y: 2327270.135021097
[2026-03-02 21:57:51] 2026-03-02 20:57:06,414 | INFO     | intersect: -7639315482.11754
[2026-03-02 21:57:51] 2026-03-02 20:57:06,415 | INFO     | chi2: 2.020945001208637
[2026-03-02 21:57:51] 2026-03-02 20:57:06,415 | INFO     | sum of square deviations: 3871990738.0
[2026-03-02 21:57:51] 2026-03-02 20:57:06,417 | INFO     | sum of deviations: 30972325805.999996
[2026-03-02 21:57:51] 2026-03-02 20:57:06,417 | INFO     | mean x: 1772477648.5
[2026-03-02 21:57:51] 2026-03-02 20:57:06,417 | INFO     | mean y: 2334986.1551724137
[2026-03-02 21:57:51] 2026-03-02 20:57:06,417 | INFO     | intersect: -14175838188.285603
[2026-03-02 21:57:51] 2026-03-02 20:57:06,418 | INFO     | chi2: 1.350436144807357
[2026-03-02 21:57:51] 2026-03-02 20:57:06,418 | INFO     | current chi2=1.350436144807357 (change=33.1779863380883 %)
[2026-03-02 21:57:51] 2026-03-02 20:57:06,418 | INFO     | sum of square deviations: 3627000098.0
[2026-03-02 21:57:51] 2026-03-02 20:57:06,419 | INFO     | sum of deviations: 30197120116.000004
[2026-03-02 21:57:51] 2026-03-02 20:57:06,420 | INFO     | mean x: 1772477496.0
[2026-03-02 21:57:51] 2026-03-02 20:57:06,420 | INFO     | mean y: 2334503.537444934
[2026-03-02 21:57:51] 2026-03-02 20:57:06,420 | INFO     | intersect: -14754686285.938948
[2026-03-02 21:57:51] 2026-03-02 20:57:06,420 | INFO     | chi2: 1.3510045453499837
[2026-03-02 21:57:51] 2026-03-02 20:57:06,420 | INFO     | current chi2=1.3510045453499837 (change=-0.04209014582528295 %)
[2026-03-02 21:57:51] 2026-03-02 20:57:06,420 | INFO     | right removable region: 226
[2026-03-02 21:57:51] 2026-03-02 20:57:06,421 | INFO     | sum of square deviations: 3871990738.0
[2026-03-02 21:57:51] 2026-03-02 20:57:06,422 | INFO     | sum of deviations: -13422780898.5
[2026-03-02 21:57:51] 2026-03-02 20:57:06,423 | INFO     | mean x: 1772477953.5
[2026-03-02 21:57:51] 2026-03-02 20:57:06,423 | INFO     | mean y: 2345688.1767241377
[2026-03-02 21:57:51] 2026-03-02 20:57:06,423 | INFO     | intersect: 6146880845.185195
[2026-03-02 21:57:51] 2026-03-02 20:57:06,423 | INFO     | chi2: 0.6989811439710295
[2026-03-02 21:57:51] 2026-03-02 20:57:06,423 | INFO     | current chi2=0.6989811439710295 (change=65.4131535715717 %)
[2026-03-02 21:57:51] 2026-03-02 20:57:06,424 | INFO     | sum of square deviations: 3627000098.0
[2026-03-02 21:57:51] 2026-03-02 20:57:06,425 | INFO     | sum of deviations: -10407228300.0
[2026-03-02 21:57:51] 2026-03-02 20:57:06,425 | INFO     | mean x: 1772478106.0
[2026-03-02 21:57:51] 2026-03-02 20:57:06,425 | INFO     | mean y: 2343807.7444933923
[2026-03-02 21:57:51] 2026-03-02 20:57:06,426 | INFO     | intersect: 5088250564.699204
[2026-03-02 21:57:51] 2026-03-02 20:57:06,426 | INFO     | chi2: 0.6936381602291126
[2026-03-02 21:57:51] 2026-03-02 20:57:06,426 | INFO     | current chi2=0.6936381602291126 (change=0.7643959766299981 %)
[2026-03-02 21:57:51] 2026-03-02 20:57:06,426 | INFO     | left removable region: 20
[2026-03-02 21:57:51] 2026-03-02 20:57:06,426 | INFO     | sum of square deviations: 2710627567.5
[2026-03-02 21:57:51] 2026-03-02 20:57:06,428 | INFO     | sum of deviations: 4985131944.5
[2026-03-02 21:57:51] 2026-03-02 20:57:06,428 | INFO     | mean x: 1772478075.5
[2026-03-02 21:57:51] 2026-03-02 20:57:06,428 | INFO     | mean y: 2350418.4611650486
[2026-03-02 21:57:51] 2026-03-02 20:57:06,428 | INFO     | intersect: -3257424985.9668107
[2026-03-02 21:57:51] 2026-03-02 20:57:06,428 | INFO     | chi2: 0.0006264120347713544
[2026-03-02 21:57:51] 2026-03-02 20:57:06,429 | INFO     | current memory leak: 1.84 B/s (using 206 data points, chi2=0.00)
[2026-03-02 21:57:51] 2026-03-02 20:57:06,429 | INFO     | could have reported an average CPU frequency of 2536 MHz (11 samples)
[2026-03-02 21:57:51] 2026-03-02 20:57:06,429 | INFO     | ..............................
[2026-03-02 21:57:51] 2026-03-02 20:57:06,430 | INFO     | . Timing measurements:
[2026-03-02 21:57:51] 2026-03-02 20:57:06,430 | INFO     | . get job = 0 s
[2026-03-02 21:57:51] 2026-03-02 20:57:06,430 | INFO     | . initial setup = 6 s
[2026-03-02 21:57:51] 2026-03-02 20:57:06,430 | INFO     | . payload setup = 6 s
[2026-03-02 21:57:51] 2026-03-02 20:57:06,430 | INFO     | . stage-in = 0 s
[2026-03-02 21:57:51] 2026-03-02 20:57:06,430 | INFO     | . payload execution = 14422 s
[2026-03-02 21:57:51] 2026-03-02 20:57:06,430 | INFO     | . stage-out = 1 s
[2026-03-02 21:57:51] 2026-03-02 20:57:06,430 | INFO     | . log creation = 0 s
[2026-03-02 21:57:51] 2026-03-02 20:57:06,430 | INFO     | ..............................
[2026-03-02 21:57:51] 2026-03-02 20:57:06,528 | INFO     | 
[2026-03-02 21:57:51] 2026-03-02 20:57:06,528 | INFO     | job summary report
[2026-03-02 21:57:51] 2026-03-02 20:57:06,528 | INFO     | --------------------------------------------------
[2026-03-02 21:57:51] 2026-03-02 20:57:06,528 | INFO     | PanDA job id: 7035850059
[2026-03-02 21:57:51] 2026-03-02 20:57:06,528 | INFO     | task id: 48838416
[2026-03-02 21:57:51] 2026-03-02 20:57:06,528 | INFO     | errors: (none)
[2026-03-02 21:57:51] 2026-03-02 20:57:06,528 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 21:57:51] 2026-03-02 20:57:06,528 | INFO     | pilot state: finished 
[2026-03-02 21:57:51] 2026-03-02 20:57:06,528 | INFO     | transexitcode: 0
[2026-03-02 21:57:51] 2026-03-02 20:57:06,529 | INFO     | exeerrorcode: 0
[2026-03-02 21:57:51] 2026-03-02 20:57:06,529 | INFO     | exeerrordiag: 
[2026-03-02 21:57:51] 2026-03-02 20:57:06,529 | INFO     | exitcode: 0
[2026-03-02 21:57:51] 2026-03-02 20:57:06,529 | INFO     | exitmsg: OK
[2026-03-02 21:57:51] 2026-03-02 20:57:06,529 | INFO     | cpuconsumptiontime: 55385 s
[2026-03-02 21:57:51] 2026-03-02 20:57:06,529 | INFO     | nevents: 400
[2026-03-02 21:57:51] 2026-03-02 20:57:06,529 | INFO     | neventsw: 0
[2026-03-02 21:57:51] 2026-03-02 20:57:06,529 | INFO     | pid: 3647766
[2026-03-02 21:57:51] 2026-03-02 20:57:06,529 | INFO     | pgrp: 3647766
[2026-03-02 21:57:51] 2026-03-02 20:57:06,529 | INFO     | corecount: 4
[2026-03-02 21:57:51] 2026-03-02 20:57:06,529 | INFO     | event service: False
[2026-03-02 21:57:51] 2026-03-02 20:57:06,529 | INFO     | sizes: {0: 2281807, 1: 2282268, 12: 2282268, 14432: 2313075, 14433: 2322095, 14434: 2322473}
[2026-03-02 21:57:51] 2026-03-02 20:57:06,530 | INFO     | --------------------------------------------------
[2026-03-02 21:57:51] 2026-03-02 20:57:06,530 | INFO     | 
[2026-03-02 21:57:51] 2026-03-02 20:57:06,530 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2026-03-02 21:57:51] 2026-03-02 20:57:06,554 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,555 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,555 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,555 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,555 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,555 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,555 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,555 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,555 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,555 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,556 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,556 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 21:57:51] 2026-03-02 20:57:06,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,556 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 21:57:51] 2026-03-02 20:57:06,557 | INFO     | job 7035850059 has completed (purged errors)
[2026-03-02 21:57:51] 2026-03-02 20:57:06,557 | INFO     | overall cleanup function is called
[2026-03-02 21:57:51] 2026-03-02 20:57:07,564 | INFO     | --- collectZombieJob: --- 10, [3647766]
[2026-03-02 21:57:51] 2026-03-02 20:57:07,565 | INFO     | zombie collector waiting for pid 3647766
[2026-03-02 21:57:51] 2026-03-02 20:57:07,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 21:57:51] 2026-03-02 20:57:07,565 | INFO     | collected zombie processes
[2026-03-02 21:57:51] 2026-03-02 20:57:07,565 | INFO     | will attempt to kill all subprocesses of pid=3647766
[2026-03-02 21:57:51] 2026-03-02 20:57:07,931 | INFO     | process IDs to be killed: [3647766] (in reverse order)
[2026-03-02 21:57:51] 2026-03-02 20:57:08,060 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 21:57:51] 2026-03-02 20:57:08,060 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 21:57:51] 2026-03-02 20:57:08,071 | INFO     | did not find any defunct processes belonging to 3647766
[2026-03-02 21:57:51] 2026-03-02 20:57:08,086 | INFO     | did not find any defunct processes belonging to 3647766
[2026-03-02 21:57:51] 2026-03-02 20:57:08,087 | INFO     | ready for new job
[2026-03-02 21:57:51] 2026-03-02 20:57:08,087 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 21:57:51] 2026-03-02 20:57:08,090 | INFO     | **************************************
[2026-03-02 21:57:51] 2026-03-02 20:57:08,090 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 21:57:51] 2026-03-02 20:57:08,090 | INFO     | **************************************
[2026-03-02 21:57:51] 2026-03-02 20:57:08,091 | INFO     | 
[2026-03-02 21:57:51] 2026-03-02 20:57:08,105 | INFO     | architecture information:
[2026-03-02 21:57:51] 2026-03-02 20:57:08,110 | INFO     | executing command: cat /etc/os-release
[2026-03-02 21:57:51] 2026-03-02 20:57:08,130 | INFO     | cat /etc/os-release:
[2026-03-02 21:57:51] NAME="CentOS Linux"
[2026-03-02 21:57:51] VERSION="7 (Core)"
[2026-03-02 21:57:51] ID="centos"
[2026-03-02 21:57:51] ID_LIKE="rhel fedora"
[2026-03-02 21:57:51] VERSION_ID="7"
[2026-03-02 21:57:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 21:57:51] ANSI_COLOR="0;31"
[2026-03-02 21:57:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 21:57:51] HOME_URL="https://www.centos.org/"
[2026-03-02 21:57:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 21:57:51] 
[2026-03-02 21:57:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 21:57:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 21:57:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 21:57:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 21:57:51] 
[2026-03-02 21:57:51] 2026-03-02 20:57:08,130 | INFO     | **************************************
[2026-03-02 21:57:51] 2026-03-02 20:57:08,464 | WARNING  | process 3647766 can no longer be monitored (due to stat problems) - aborting
[2026-03-02 21:57:51] 2026-03-02 20:57:08,633 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2026-03-02 21:57:51] 2026-03-02 20:57:08,654 | INFO     | sufficient remaining disk space (677800574976 B)
[2026-03-02 21:57:51] 2026-03-02 20:57:08,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 21:57:51] 2026-03-02 20:57:08,655 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 21:57:51] 2026-03-02 20:57:08,655 | INFO     | update_server=False
[2026-03-02 21:57:51] 2026-03-02 20:57:08,655 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 21:57:51] 2026-03-02 20:57:08,655 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 21:57:51] 2026-03-02 20:57:08,656 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 21:57:51] 2026-03-02 20:57:08,699 | INFO     | all job control threads have been joined
[2026-03-02 21:57:51] 2026-03-02 20:57:08,745 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 21:57:51] 2026-03-02 20:57:08,746 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot24/slots/0/PanDA_Pilot-7035850059/payload.stdout) since it has not been created yet
[2026-03-02 21:57:51] 2026-03-02 20:57:08,746 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2026-03-02 21:57:51] 2026-03-02 20:57:08,764 | INFO     | sufficient remaining disk space (677800574976 B)
[2026-03-02 21:57:51] 2026-03-02 20:57:08,765 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-02 21:57:51] 2026-03-02 20:57:08,765 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-7035850059/HITS.48838416._010352.pool.root.1 since it does not exist
[2026-03-02 21:57:51] 2026-03-02 20:57:09,141 | INFO     | number of running child processes to parent process 3647766: 1
[2026-03-02 21:57:51] 2026-03-02 20:57:09,141 | INFO     | maximum number of monitored processes: 6
[2026-03-02 21:57:51] 2026-03-02 20:57:09,141 | INFO     | aborting job monitoring since job object (job id=7035850059) has expired
[2026-03-02 21:57:51] 2026-03-02 20:57:09,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 21:57:51] 2026-03-02 20:57:09,141 | INFO     | will abort loop
[2026-03-02 21:57:51] 2026-03-02 20:57:09,575 | INFO     | all payload control threads have been joined
[2026-03-02 21:57:51] 2026-03-02 20:57:09,608 | INFO     | all data control threads have been joined
[2026-03-02 21:57:51] 2026-03-02 20:57:09,660 | INFO     | [job] retrieve thread has finished
[2026-03-02 21:57:51] 2026-03-02 20:57:09,705 | INFO     | [job] control thread has finished
[2026-03-02 21:57:51] 2026-03-02 20:57:09,739 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 21:57:51] 2026-03-02 20:57:09,819 | INFO     | [payload] validate_post thread has finished
[2026-03-02 21:57:51] 2026-03-02 20:57:09,857 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 21:57:51] 2026-03-02 20:57:09,991 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 21:57:51] 2026-03-02 20:57:10,030 | INFO     | [job] validate thread has finished
[2026-03-02 21:57:51] 2026-03-02 20:57:10,146 | INFO     | [job] job monitor thread has finished
[2026-03-02 21:57:51] 2026-03-02 20:57:10,329 | INFO     | [payload] failed_post thread has finished
[2026-03-02 21:57:51] 2026-03-02 20:57:10,580 | INFO     | [payload] control thread has finished
[2026-03-02 21:57:51] 2026-03-02 20:57:10,613 | INFO     | [data] control thread has finished
[2026-03-02 21:57:51] 2026-03-02 20:57:10,660 | INFO     | [data] copytool_out thread has finished
[2026-03-02 21:57:51] 2026-03-02 20:57:10,852 | INFO     | [data] copytool_in thread has finished
[2026-03-02 21:57:51] 2026-03-02 20:57:10,917 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 21:57:51] 2026-03-02 20:57:11,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 21:57:51] 2026-03-02 20:57:12,540 | INFO     | [job] queue monitor thread has finished
[2026-03-02 21:57:51] 2026-03-02 20:57:12,660 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 21:57:51] 2026-03-02 20:57:38,397 | INFO     | PID=3642989 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 21:57:51] 2026-03-02 20:57:38,397 | INFO     | .. there are 13 such processes running
[2026-03-02 21:57:51] 2026-03-02 20:57:38,397 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 21:57:51] 2026-03-02 20:57:38,397 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 21:57:51] 2026-03-02 20:57:38,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 21:57:51] 2026-03-02 20:57:44,202 | INFO     | [monitor] cgroup control has ended
[2026-03-02 21:57:51] 2026-03-02 20:57:45,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22770485458752)>', '<ExcThread(monitor, started 22770242291456)>']
[2026-03-02 21:57:51] 2026-03-02 20:57:46,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 21:57:51] 2026-03-02 20:57:46,438 | INFO     | [monitor] control thread has ended
[2026-03-02 21:57:51] 2026-03-02 20:57:50,967 | INFO     | all workflow threads have been joined
[2026-03-02 21:57:51] 2026-03-02 20:57:50,968 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 21:57:51] 2026-03-02 20:57:50,968 | INFO     | traces error code: 0
[2026-03-02 21:57:51] 2026-03-02 20:57:50,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 21:57:51] 2026-03-02 20:57:51,131 [wrapper] ==== pilot stdout END ====
[2026-03-02 21:57:51] 2026-03-02 20:57:51,133 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 21:57:51] 2026-03-02 20:57:51,136 [wrapper] pilotpid: 3642989
[2026-03-02 21:57:51] 2026-03-02 20:57:51,138 [wrapper] Pilot exit status: 0
[2026-03-02 21:57:51] 2026-03-02 20:57:51,150 [wrapper] pandaids: 7035850059
[2026-03-02 21:57:51] 2026-03-02 20:57:51,220 [wrapper] cleanup supervisor_pilot 3883791 3642990
[2026-03-02 21:57:51] 2026-03-02 20:57:51,223 [wrapper] Test setup, not cleaning
[2026-03-02 21:57:51] 2026-03-02 20:57:51,226 [wrapper] apfmon messages muted
[2026-03-02 21:57:51] 2026-03-02 20:57:51,229 [wrapper] ==== wrapper stdout END ====
[2026-03-02 21:57:51] 2026-03-02 20:57:51,232 [wrapper] ==== wrapper stderr END ====
[2026-03-02 21:57:51]  *** Error codes and diagnostics ***
[2026-03-02 21:57:51]     "exeErrorCode": 0,
[2026-03-02 21:57:51]     "exeErrorDiag": "",
[2026-03-02 21:57:51]     "pilotErrorCode": 0,
[2026-03-02 21:57:51]     "pilotErrorDiag": "",
[2026-03-02 21:57:51]  *** Listing of results directory ***
[2026-03-02 21:57:51] total 523948
[2026-03-02 21:57:51] -rw-r--r-- 1 boinc boinc    584627 Mar  2 07:15 pilot3.tar.gz
[2026-03-02 21:57:51] -rwx------ 1 boinc boinc     36322 Mar  2 07:15 runpilot2-wrapper.sh
[2026-03-02 21:57:51] -rw-r--r-- 1 boinc boinc      5111 Mar  2 07:15 queuedata.json
[2026-03-02 21:57:51] -rw-r--r-- 1 boinc boinc       100 Mar  2 17:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 21:57:51] -rwxr-xr-x 1 boinc boinc      7986 Mar  2 17:55 run_atlas
[2026-03-02 21:57:51] -rw-r--r-- 1 boinc boinc       105 Mar  2 17:55 job.xml
[2026-03-02 21:57:51] -rw-r--r-- 2 boinc boinc 292872913 Mar  2 17:56 EVNT.48220085._000346.pool.root.1
[2026-03-02 21:57:51] -rw-r--r-- 1 boinc boinc      6638 Mar  2 17:56 init_data.xml
[2026-03-02 21:57:51] -rw-r--r-- 2 boinc boinc     15845 Mar  2 17:56 start_atlas.sh
[2026-03-02 21:57:51] drwxrwx--x 2 boinc boinc      4096 Mar  2 17:56 shared
[2026-03-02 21:57:51] -rw-r--r-- 2 boinc boinc    597964 Mar  2 17:56 input.tar.gz
[2026-03-02 21:57:51] -rw-r--r-- 1 boinc boinc         0 Mar  2 17:56 boinc_lockfile
[2026-03-02 21:57:51] -rw-r--r-- 1 boinc boinc      2567 Mar  2 17:56 pandaJob.out
[2026-03-02 21:57:51] -rw------- 1 boinc boinc    998105 Mar  2 17:56 agis_schedconf.cvmfs.json
[2026-03-02 21:57:51] -rw------- 1 boinc boinc       443 Mar  2 17:56 workernode_map.json
[2026-03-02 21:57:51] drwx------ 5 boinc boinc      4096 Mar  2 17:56 pilot3
[2026-03-02 21:57:51] -rw------- 1 boinc boinc 234859283 Mar  2 21:56 HITS.48838416._010352.pool.root.1
[2026-03-02 21:57:51] -rw-r--r-- 1 boinc boinc       530 Mar  2 21:56 boinc_task_state.xml
[2026-03-02 21:57:51] -rw------- 1 boinc boinc      1032 Mar  2 21:57 memory_monitor_summary.json
[2026-03-02 21:57:51] -rw------- 1 boinc boinc   1512931 Mar  2 21:57 agis_ddmendpoints.agis.ALL.json
[2026-03-02 21:57:51] -rw------- 1 boinc boinc    400602 Mar  2 21:57 log.48838416._010352.job.log.tgz.1
[2026-03-02 21:57:51] -rw------- 1 boinc boinc        95 Mar  2 21:57 pilot_heartbeat.json
[2026-03-02 21:57:51] -rw------- 1 boinc boinc      6388 Mar  2 21:57 heartbeat.json
[2026-03-02 21:57:51] -rw-r--r-- 1 boinc boinc        28 Mar  2 21:57 wrapper_checkpoint.txt
[2026-03-02 21:57:51] -rw-r--r-- 1 boinc boinc      8192 Mar  2 21:57 boinc_mmap_file
[2026-03-02 21:57:51] -rw------- 1 boinc boinc      6037 Mar  2 21:57 pilotlog.txt
[2026-03-02 21:57:51] -rw------- 1 boinc boinc   2029137 Mar  2 21:57 log.48838416._010352.job.log.1
[2026-03-02 21:57:51] -rw------- 1 boinc boinc       357 Mar  2 21:57 output.list
[2026-03-02 21:57:51] -rw-r--r-- 1 boinc boinc       620 Mar  2 21:57 runtime_log
[2026-03-02 21:57:51] -rw------- 1 boinc boinc   2447360 Mar  2 21:57 result.tar.gz
[2026-03-02 21:57:51] -rw-r--r-- 1 boinc boinc      9205 Mar  2 21:57 runtime_log.err
[2026-03-02 21:57:51] -rw------- 1 boinc boinc       665 Mar  2 21:57 hxUNDm1jBH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmegCLDmwoMPzm.diag
[2026-03-02 21:57:51] -rw-r--r-- 1 boinc boinc     21123 Mar  2 21:57 stderr.txt
[2026-03-02 21:57:51] HITS file was successfully produced:
[2026-03-02 21:57:51] -rw------- 1 boinc boinc 234859283 Mar  2 21:56 shared/HITS.pool.root.1
[2026-03-02 21:57:51]  *** Contents of shared directory: ***
[2026-03-02 21:57:51] total 518368
[2026-03-02 21:57:51] -rw-r--r-- 2 boinc boinc 292872913 Mar  2 17:56 ATLAS.root_0
[2026-03-02 21:57:51] -rw-r--r-- 2 boinc boinc     15845 Mar  2 17:56 start_atlas.sh
[2026-03-02 21:57:51] -rw-r--r-- 2 boinc boinc    597964 Mar  2 17:56 input.tar.gz
[2026-03-02 21:57:51] -rw------- 1 boinc boinc 234859283 Mar  2 21:56 HITS.pool.root.1
[2026-03-02 21:57:51] -rw------- 1 boinc boinc   2447360 Mar  2 21:57 result.tar.gz
21:57:52 (3638875): run_atlas exited; CPU time 55998.581065
21:57:52 (3638875): called boinc_finish(0)

</stderr_txt>
]]>

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