Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:12:00 (1991513): wrapper (7.7.26015): starting
05:12:00 (1991513): wrapper: running run_atlas (--nthreads 8)
[2026-03-02 05:12:00] Arguments: --nthreads 8
[2026-03-02 05:12:00] Threads: 8
[2026-03-02 05:12:00] Checking for CVMFS
[2026-03-02 05:12:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 05:12:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 05:12:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 05:12:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 05:12:03] 2.11.3.0 1348857 131578 244744 156807 3 202 35794880 45568001 10861 130560 0 747119460 99.816 400711619 19807 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-03-02 05:12:03] CVMFS is ok
[2026-03-02 05:12:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 05:12:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 05:12:03] Further information can be found at the LHC@home message board.
[2026-03-02 05:12:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 05:12:03] Checking for apptainer binary...
[2026-03-02 05:12:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 05:12:03] Running /usr/bin/apptainer --version
[2026-03-02 05:12:03] apptainer version 1.4.1-1.el9
[2026-03-02 05:12:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 05:12:06] wns0004.triumf.lcg
[2026-03-02 05:12:06] apptainer works
[2026-03-02 05:12:06] Set ATHENA_PROC_NUMBER=8
[2026-03-02 05:12:06] Set ATHENA_CORE_NUMBER=8
[2026-03-02 05:12:06] Starting ATLAS job with PandaID=7035911963
[2026-03-02 05:12:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 05:19:52]  *** The last 200 lines of the pilot log: ***
[2026-03-02 05:19:52] 2026-03-02 13:19:16,412 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | WARNING  | wrong length of table data, x=[1772457350.0, 1772457411.0], y=[2368.0, 464936.0] (must be same and length>=4)
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | ..............................
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . Timing measurements:
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . get job = 0 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . initial setup = 64 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . payload setup = 62 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . stage-in = 0 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . payload execution = 93 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,414 | INFO     | . stage-out = 1 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,414 | INFO     | . log creation = 0 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,414 | INFO     | ..............................
[2026-03-02 05:19:52] 2026-03-02 13:19:16,414 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 05:19:52] 2026-03-02 13:19:16,414 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7035911963/pilotlog.txt
[2026-03-02 05:19:52] 2026-03-02 13:19:16,757 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-02 05:19:52] - Log from pilotlog.txt -
[2026-03-02 05:19:52] 2026-03-02 13:19:16,396 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7035911963/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 05:19:52] 2026-03-02 13:19:16,397 | INFO     | extracted standard info from prmon json
[2026-03-02 05:19:52] 2026-03-02 13:19:16,411 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 05:19:52] 2026-03-02 13:19:16,411 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 05:19:52] 2026-03-02 13:19:16,412 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 05:19:52] 2026-03-02 13:19:16,412 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | WARNING  | wrong length of table data, x=[1772457350.0, 1772457411.0], y=[2368.0, 464936.0] (must be same and length>=4)
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | ..............................
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . Timing measurements:
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . get job = 0 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . initial setup = 64 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . payload setup = 62 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . stage-in = 0 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . payload execution = 93 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,414 | INFO     | . stage-out = 1 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,414 | INFO     | . log creation = 0 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,414 | INFO     | ..............................
[2026-03-02 05:19:52] 2026-03-02 13:19:16,414 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 05:19:52] 2026-03-02 13:19:16,414 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7035911963/pilotlog.txt
[2026-03-02 05:19:52] 2026-03-02 13:19:16,758 | WARNING  | 
[2026-03-02 05:19:52] [begin log extracts]
[2026-03-02 05:19:52] - Log from pilotlog.txt -
[2026-03-02 05:19:52] 2026-03-02 13:19:16,396 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7035911963/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 05:19:52] 2026-03-02 13:19:16,397 | INFO     | extracted standard info from prmon json
[2026-03-02 05:19:52] 2026-03-02 13:19:16,411 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 05:19:52] 2026-03-02 13:19:16,411 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 05:19:52] 2026-03-02 13:19:16,412 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 05:19:52] 2026-03-02 13:19:16,412 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | WARNING  | wrong length of table data, x=[1772457350.0, 1772457411.0], y=[2368.0, 464936.0] (must be same and length>=4)
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | ..............................
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . Timing measurements:
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . get job = 0 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . initial setup = 64 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . payload setup = 62 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . stage-in = 0 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,413 | INFO     | . payload execution = 93 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,414 | INFO     | . stage-out = 1 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,414 | INFO     | . log creation = 0 s
[2026-03-02 05:19:52] 2026-03-02 13:19:16,414 | INFO     | ..............................
[2026-03-02 05:19:52] 2026-03-02 13:19:16,414 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-02 05:19:52] 2026-03-02 13:19:16,414 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7035911963/pilotlog.txt
[2026-03-02 05:19:52] [end log extracts]
[2026-03-02 05:19:52] 2026-03-02 13:19:16,758 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-02 05:19:52] 2026-03-02 13:19:16,759 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-02 05:19:52] 2026-03-02 13:19:17,870 | INFO     | 
[2026-03-02 05:19:52] 2026-03-02 13:19:17,870 | INFO     | job summary report
[2026-03-02 05:19:52] 2026-03-02 13:19:17,871 | INFO     | --------------------------------------------------
[2026-03-02 05:19:52] 2026-03-02 13:19:17,871 | INFO     | PanDA job id: 7035911963
[2026-03-02 05:19:52] 2026-03-02 13:19:17,871 | INFO     | task id: 48844912
[2026-03-02 05:19:52] 2026-03-02 13:19:17,871 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-02 05:16:59,515 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-02 05:19:52] 2026-03-02 13:19:17,871 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 05:19:52] 2026-03-02 13:19:17,871 | INFO     | pilot state: failed 
[2026-03-02 05:19:52] 2026-03-02 13:19:17,871 | INFO     | transexitcode: 65
[2026-03-02 05:19:52] 2026-03-02 13:19:17,871 | INFO     | exeerrorcode: 65
[2026-03-02 05:19:52] 2026-03-02 13:19:17,871 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-02 05:19:52] 2026-03-02 13:19:17,871 | INFO     | exitcode: 65
[2026-03-02 05:19:52] 2026-03-02 13:19:17,871 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-02 05:19:52] 2026-03-02 13:19:17,872 | INFO     | cpuconsumptiontime: 14 s
[2026-03-02 05:19:52] 2026-03-02 13:19:17,872 | INFO     | nevents: 0
[2026-03-02 05:19:52] 2026-03-02 13:19:17,872 | INFO     | neventsw: 0
[2026-03-02 05:19:52] 2026-03-02 13:19:17,872 | INFO     | pid: 2000310
[2026-03-02 05:19:52] 2026-03-02 13:19:17,872 | INFO     | pgrp: 2000310
[2026-03-02 05:19:52] 2026-03-02 13:19:17,872 | INFO     | corecount: 8
[2026-03-02 05:19:52] 2026-03-02 13:19:17,872 | INFO     | event service: False
[2026-03-02 05:19:52] 2026-03-02 13:19:17,872 | INFO     | sizes: {0: 2281268, 1: 2282383, 2: 2282383, 159: 2305669, 160: 2305645, 162: 2309965, 163: 2310121, 280: 2310287}
[2026-03-02 05:19:52] 2026-03-02 13:19:17,872 | INFO     | --------------------------------------------------
[2026-03-02 05:19:52] 2026-03-02 13:19:17,872 | INFO     | 
[2026-03-02 05:19:52] 2026-03-02 13:19:17,872 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-02 05:19:52] 2026-03-02 13:19:18,030 | INFO     | PID=1995517 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 05:19:52] 2026-03-02 13:19:18,031 | INFO     | .. there are 19 such processes running
[2026-03-02 05:19:52] 2026-03-02 13:19:18,126 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,126 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,127 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,127 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,127 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,127 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,127 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,127 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,127 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,127 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,127 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,127 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,127 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,127 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,128 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,128 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,128 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,128 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 05:19:52] 2026-03-02 13:19:18,128 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,128 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 05:19:52] 2026-03-02 13:19:18,128 | INFO     | job 7035911963 has completed (purged errors)
[2026-03-02 05:19:52] 2026-03-02 13:19:18,128 | INFO     | overall cleanup function is called
[2026-03-02 05:19:52] 2026-03-02 13:19:19,135 | INFO     | --- collectZombieJob: --- 10, [2000310]
[2026-03-02 05:19:52] 2026-03-02 13:19:19,135 | INFO     | zombie collector waiting for pid 2000310
[2026-03-02 05:19:52] 2026-03-02 13:19:19,135 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 05:19:52] 2026-03-02 13:19:19,135 | INFO     | collected zombie processes
[2026-03-02 05:19:52] 2026-03-02 13:19:19,136 | INFO     | will attempt to kill all subprocesses of pid=2000310
[2026-03-02 05:19:52] 2026-03-02 13:19:20,143 | INFO     | process IDs to be killed: [2000310] (in reverse order)
[2026-03-02 05:19:52] 2026-03-02 13:19:20,503 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 05:19:52] 2026-03-02 13:19:20,504 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 05:19:52] 2026-03-02 13:19:20,552 | INFO     | did not find any defunct processes belonging to 2000310
[2026-03-02 05:19:52] 2026-03-02 13:19:20,577 | INFO     | did not find any defunct processes belonging to 2000310
[2026-03-02 05:19:52] 2026-03-02 13:19:20,578 | INFO     | ready for new job
[2026-03-02 05:19:52] 2026-03-02 13:19:20,578 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 05:19:52] 2026-03-02 13:19:20,599 | INFO     | **************************************
[2026-03-02 05:19:52] 2026-03-02 13:19:20,600 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 05:19:52] 2026-03-02 13:19:20,600 | INFO     | **************************************
[2026-03-02 05:19:52] 2026-03-02 13:19:20,600 | INFO     | 
[2026-03-02 05:19:52] 2026-03-02 13:19:20,601 | INFO     | architecture information:
[2026-03-02 05:19:52] 2026-03-02 13:19:20,632 | INFO     | executing command: cat /etc/os-release
[2026-03-02 05:19:52] 2026-03-02 13:19:20,751 | INFO     | cat /etc/os-release:
[2026-03-02 05:19:52] NAME="CentOS Linux"
[2026-03-02 05:19:52] VERSION="7 (Core)"
[2026-03-02 05:19:52] ID="centos"
[2026-03-02 05:19:52] ID_LIKE="rhel fedora"
[2026-03-02 05:19:52] VERSION_ID="7"
[2026-03-02 05:19:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 05:19:52] ANSI_COLOR="0;31"
[2026-03-02 05:19:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 05:19:52] HOME_URL="https://www.centos.org/"
[2026-03-02 05:19:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 05:19:52] 
[2026-03-02 05:19:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 05:19:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 05:19:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 05:19:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 05:19:52] 
[2026-03-02 05:19:52] 2026-03-02 13:19:20,751 | INFO     | **************************************
[2026-03-02 05:19:52] 2026-03-02 13:19:21,255 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-02 05:19:52] 2026-03-02 13:19:21,415 | INFO     | sufficient remaining disk space (1437225451520 B)
[2026-03-02 05:19:52] 2026-03-02 13:19:21,416 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 05:19:52] 2026-03-02 13:19:21,416 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 05:19:52] 2026-03-02 13:19:21,416 | INFO     | update_server=False
[2026-03-02 05:19:52] 2026-03-02 13:19:21,416 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 05:19:52] 2026-03-02 13:19:21,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 05:19:52] 2026-03-02 13:19:21,702 | INFO     | all data control threads have been joined
[2026-03-02 05:19:52] 2026-03-02 13:19:22,417 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 05:19:52] 2026-03-02 13:19:22,417 | INFO     | aborting loop
[2026-03-02 05:19:52] 2026-03-02 13:19:22,422 | INFO     | [job] retrieve thread has finished
[2026-03-02 05:19:52] 2026-03-02 13:19:22,462 | INFO     | [payload] validate_post thread has finished
[2026-03-02 05:19:52] 2026-03-02 13:19:22,708 | INFO     | [data] control thread has finished
[2026-03-02 05:19:52] 2026-03-02 13:19:22,726 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 05:19:52] 2026-03-02 13:19:22,726 | INFO     | [data] copytool_in thread has finished
[2026-03-02 05:19:52] 2026-03-02 13:19:22,754 | INFO     | all payload control threads have been joined
[2026-03-02 05:19:52] 2026-03-02 13:19:22,870 | INFO     | all job control threads have been joined
[2026-03-02 05:19:52] 2026-03-02 13:19:22,890 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 05:19:52] 2026-03-02 13:19:23,043 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 05:19:52] 2026-03-02 13:19:23,180 | INFO     | [payload] failed_post thread has finished
[2026-03-02 05:19:52] 2026-03-02 13:19:23,423 | INFO     | [job] job monitor thread has finished
[2026-03-02 05:19:52] 2026-03-02 13:19:23,432 | INFO     | [data] copytool_out thread has finished
[2026-03-02 05:19:52] 2026-03-02 13:19:23,635 | INFO     | [job] validate thread has finished
[2026-03-02 05:19:52] 2026-03-02 13:19:23,718 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 05:19:52] 2026-03-02 13:19:23,719 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 05:19:52] 2026-03-02 13:19:23,760 | INFO     | [payload] control thread has finished
[2026-03-02 05:19:52] 2026-03-02 13:19:23,876 | INFO     | [job] control thread has finished
[2026-03-02 05:19:52] 2026-03-02 13:19:23,896 | INFO     | [job] queue monitor thread has finished
[2026-03-02 05:19:52] 2026-03-02 13:19:24,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 05:19:52] 2026-03-02 13:19:28,654 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 05:19:52] 2026-03-02 13:19:36,199 | INFO     | [monitor] cgroup control has ended
[2026-03-02 05:19:52] 2026-03-02 13:19:37,732 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140180783990592)>', '<ExcThread(monitor, started 140180375709440)>']
[2026-03-02 05:19:52] 2026-03-02 13:19:42,758 | INFO     | all workflow threads have been joined
[2026-03-02 05:19:52] 2026-03-02 13:19:42,758 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 05:19:52] 2026-03-02 13:19:42,759 | INFO     | traces error code: 0
[2026-03-02 05:19:52] 2026-03-02 13:19:42,759 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 05:19:52] 2026-03-02 13:19:50,855 | INFO     | PID=1995517 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 05:19:52] 2026-03-02 13:19:50,855 | INFO     | .. there are 19 such processes running
[2026-03-02 05:19:52] 2026-03-02 13:19:50,856 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 05:19:52] 2026-03-02 13:19:50,856 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 05:19:52] 2026-03-02 13:19:50,856 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 05:19:52] 2026-03-02 13:19:50,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 05:19:52] 2026-03-02 13:19:50,856 | INFO     | [monitor] control thread has ended
[2026-03-02 05:19:52] 2026-03-02 13:19:51,415 [wrapper] ==== pilot stdout END ====
[2026-03-02 05:19:52] 2026-03-02 13:19:51,457 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 05:19:52] 2026-03-02 13:19:51,488 [wrapper] pilotpid: 1995517
[2026-03-02 05:19:52] 2026-03-02 13:19:51,558 [wrapper] Pilot exit status: 0
[2026-03-02 05:19:52] 2026-03-02 13:19:51,743 [wrapper] pandaids: 7035911963
[2026-03-02 05:19:52] 2026-03-02 13:19:51,921 [wrapper] cleanup supervisor_pilot 1995523 1995518
[2026-03-02 05:19:52] 2026-03-02 13:19:51,960 [wrapper] Test setup, not cleaning
[2026-03-02 05:19:52] 2026-03-02 13:19:51,995 [wrapper] apfmon messages muted
[2026-03-02 05:19:52] 2026-03-02 13:19:52,024 [wrapper] ==== wrapper stdout END ====
[2026-03-02 05:19:52] 2026-03-02 13:19:52,068 [wrapper] ==== wrapper stderr END ====
[2026-03-02 05:19:52]  *** Error codes and diagnostics ***
[2026-03-02 05:19:52]     "exeErrorCode": 65,
[2026-03-02 05:19:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-02 05:19:52]     "pilotErrorCode": 1305,
[2026-03-02 05:19:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-02 05:19:52]  *** Listing of results directory ***
[2026-03-02 05:19:52] total 243144
[2026-03-02 05:19:52] -rw-r--r--. 1 boinc boinc    584627 Mar  2 01:36 pilot3.tar.gz
[2026-03-02 05:19:52] -rw-r--r--. 1 boinc boinc      5111 Mar  2 01:38 queuedata.json
[2026-03-02 05:19:52] -rwx------. 1 boinc boinc     36322 Mar  2 01:38 runpilot2-wrapper.sh
[2026-03-02 05:19:52] -rw-r--r--. 1 boinc boinc       100 Mar  2 05:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 05:19:52] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 05:11 run_atlas
[2026-03-02 05:19:52] -rw-r--r--. 1 boinc boinc       105 Mar  2 05:11 job.xml
[2026-03-02 05:19:52] -rw-r--r--. 2 boinc boinc 244822208 Mar  2 05:12 EVNT.48454616._000002.pool.root.1
[2026-03-02 05:19:52] -rw-r--r--. 1 boinc boinc      6443 Mar  2 05:12 init_data.xml
[2026-03-02 05:19:52] -rw-r--r--. 2 boinc boinc     15845 Mar  2 05:12 start_atlas.sh
[2026-03-02 05:19:52] drwxrwx--x. 2 boinc boinc      4096 Mar  2 05:12 shared
[2026-03-02 05:19:52] -rw-r--r--. 2 boinc boinc    597973 Mar  2 05:12 input.tar.gz
[2026-03-02 05:19:52] -rw-r--r--. 1 boinc boinc         0 Mar  2 05:12 boinc_lockfile
[2026-03-02 05:19:52] -rw-r--r--. 1 boinc boinc      2626 Mar  2 05:12 pandaJob.out
[2026-03-02 05:19:52] -rw-------. 1 boinc boinc   1513015 Mar  2 05:13 agis_ddmendpoints.agis.ALL.json
[2026-03-02 05:19:52] -rw-------. 1 boinc boinc       442 Mar  2 05:14 workernode_map.json
[2026-03-02 05:19:52] -rw-------. 1 boinc boinc    998151 Mar  2 05:14 agis_schedconf.cvmfs.json
[2026-03-02 05:19:52] drwx------. 5 boinc boinc      4096 Mar  2 05:14 pilot3
[2026-03-02 05:19:52] -rw-------. 1 boinc boinc       981 Mar  2 05:17 memory_monitor_summary.json
[2026-03-02 05:19:52] -rw-------. 1 boinc boinc     22957 Mar  2 05:17 log.48844912._000045.job.log.tgz.1
[2026-03-02 05:19:52] -rw-r--r--. 1 boinc boinc       524 Mar  2 05:17 boinc_task_state.xml
[2026-03-02 05:19:52] -rw-------. 1 boinc boinc      7024 Mar  2 05:19 heartbeat.json
[2026-03-02 05:19:52] -rw-r--r--. 1 boinc boinc      8192 Mar  2 05:19 boinc_mmap_file
[2026-03-02 05:19:52] -rw-r--r--. 1 boinc boinc        22 Mar  2 05:19 wrapper_checkpoint.txt
[2026-03-02 05:19:52] -rw-------. 1 boinc boinc       823 Mar  2 05:19 pilotlog.txt
[2026-03-02 05:19:52] -rw-------. 1 boinc boinc        95 Mar  2 05:19 pilot_heartbeat.json
[2026-03-02 05:19:52] -rw-------. 1 boinc boinc     95687 Mar  2 05:19 log.48844912._000045.job.log.1
[2026-03-02 05:19:52] -rw-------. 1 boinc boinc       188 Mar  2 05:19 output.list
[2026-03-02 05:19:52] -rw-r--r--. 1 boinc boinc       620 Mar  2 05:19 runtime_log
[2026-03-02 05:19:52] -rw-------. 1 boinc boinc    133120 Mar  2 05:19 result.tar.gz
[2026-03-02 05:19:52] -rw-------. 1 boinc boinc       646 Mar  2 05:19 xoBODmPuEH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmI5CLDmYhuV8n.diag
[2026-03-02 05:19:52] -rw-r--r--. 1 boinc boinc      8633 Mar  2 05:19 runtime_log.err
[2026-03-02 05:19:52] -rw-r--r--. 1 boinc boinc     21983 Mar  2 05:19 stderr.txt
[2026-03-02 05:19:52] No HITS result produced
[2026-03-02 05:19:52]  *** Contents of shared directory: ***
[2026-03-02 05:19:52] total 239824
[2026-03-02 05:19:52] -rw-r--r--. 2 boinc boinc 244822208 Mar  2 05:12 ATLAS.root_0
[2026-03-02 05:19:52] -rw-r--r--. 2 boinc boinc     15845 Mar  2 05:12 start_atlas.sh
[2026-03-02 05:19:52] -rw-r--r--. 2 boinc boinc    597973 Mar  2 05:12 input.tar.gz
[2026-03-02 05:19:52] -rw-------. 1 boinc boinc    133120 Mar  2 05:19 result.tar.gz
05:19:54 (1991513): run_atlas exited; CPU time 25.483015
05:19:54 (1991513): called boinc_finish(0)

</stderr_txt>
]]>

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