Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:31:53 (29753): wrapper (7.7.26015): starting
21:31:53 (29753): wrapper: running run_atlas (--nthreads 8)
[2026-03-02 21:31:53] Arguments: --nthreads 8
[2026-03-02 21:31:53] Threads: 8
[2026-03-02 21:31:53] Checking for CVMFS
[2026-03-02 21:31:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 21:31:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 21:31:55] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 21:31:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 21:31:56] 2.11.2.0 17738 110779 133792 156819 0 53 24935866 25165824 899 130560 159 33779638 99.800 27253422 929 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-02 21:31:56] CVMFS is ok
[2026-03-02 21:31:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 21:31:56] Checking for apptainer binary...
[2026-03-02 21:31:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 21:31:56] Running /usr/bin/apptainer --version
[2026-03-02 21:31:56] apptainer version 1.3.2-1.el7
[2026-03-02 21:31:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 21:32:01] cg-vwn450.simple-grid.lan
[2026-03-02 21:32:01] apptainer works
[2026-03-02 21:32:01] Set ATHENA_PROC_NUMBER=8
[2026-03-02 21:32:01] Set ATHENA_CORE_NUMBER=8
[2026-03-02 21:32:01] Starting ATLAS job with PandaID=7035840150
[2026-03-02 21:32:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 03:26:31]  *** The last 200 lines of the pilot log: ***
[2026-03-03 03:26:31] 2026-03-03 02:25:42,746 | INFO     | log transfer has been attempted: DONE
[2026-03-03 03:26:31] 2026-03-03 02:25:42,746 | INFO     | job 7035840150 has finished - writing final server update
[2026-03-03 03:26:31] 2026-03-03 02:25:42,747 | INFO     | total number of processed events: 400 (read)
[2026-03-03 03:26:31] 2026-03-03 02:25:42,749 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-7035840150/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 03:26:31] 2026-03-03 02:25:42,749 | INFO     | extracted standard info from prmon json
[2026-03-03 03:26:31] 2026-03-03 02:25:42,750 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 03:26:31] 2026-03-03 02:25:42,750 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 03:26:31] 2026-03-03 02:25:42,750 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 03:26:31] 2026-03-03 02:25:42,750 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 03:26:31] 2026-03-03 02:25:42,757 | INFO     | fitting pss+swap vs Time
[2026-03-03 03:26:31] 2026-03-03 02:25:42,758 | INFO     | sum of square deviations: 11867638328.0
[2026-03-03 03:26:31] 2026-03-03 02:25:42,762 | INFO     | sum of deviations: 130025479273.99998
[2026-03-03 03:26:31] 2026-03-03 02:25:42,762 | INFO     | mean x: 1772494480.0
[2026-03-03 03:26:31] 2026-03-03 02:25:42,767 | INFO     | mean y: 2471838.715133531
[2026-03-03 03:26:31] 2026-03-03 02:25:42,767 | INFO     | intersect: -19417520404.287384
[2026-03-03 03:26:31] 2026-03-03 02:25:42,768 | INFO     | chi2: 8.577155999857611
[2026-03-03 03:26:31] 2026-03-03 02:25:42,768 | INFO     | sum of square deviations: 11347200663.0
[2026-03-03 03:26:31] 2026-03-03 02:25:42,772 | INFO     | sum of deviations: 173185928746.0
[2026-03-03 03:26:31] 2026-03-03 02:25:42,772 | INFO     | mean x: 1772494327.5
[2026-03-03 03:26:31] 2026-03-03 02:25:42,772 | INFO     | mean y: 2484366.0542168673
[2026-03-03 03:26:31] 2026-03-03 02:25:42,772 | INFO     | intersect: -27050097625.031013
[2026-03-03 03:26:31] 2026-03-03 02:25:42,773 | INFO     | chi2: 7.101570293257339
[2026-03-03 03:26:31] 2026-03-03 02:25:42,773 | INFO     | current chi2=7.101570293257339 (change=17.203671084270454 %)
[2026-03-03 03:26:31] 2026-03-03 02:25:42,773 | INFO     | right removable region: 331
[2026-03-03 03:26:31] 2026-03-03 02:25:42,774 | INFO     | sum of square deviations: 11347200663.0
[2026-03-03 03:26:31] 2026-03-03 02:25:42,778 | INFO     | sum of deviations: 11574234519.499989
[2026-03-03 03:26:31] 2026-03-03 02:25:42,778 | INFO     | mean x: 1772494632.5
[2026-03-03 03:26:31] 2026-03-03 02:25:42,778 | INFO     | mean y: 2506528.4006024096
[2026-03-03 03:26:31] 2026-03-03 02:25:42,778 | INFO     | intersect: -1805452030.7534993
[2026-03-03 03:26:31] 2026-03-03 02:25:42,779 | INFO     | chi2: 3.8242610077184773
[2026-03-03 03:26:31] 2026-03-03 02:25:42,779 | INFO     | current chi2=3.8242610077184773 (change=55.41341433242016 %)
[2026-03-03 03:26:31] 2026-03-03 02:25:42,780 | INFO     | sum of square deviations: 10842205148.0
[2026-03-03 03:26:31] 2026-03-03 02:25:42,783 | INFO     | sum of deviations: -64239373890.00001
[2026-03-03 03:26:31] 2026-03-03 02:25:42,783 | INFO     | mean x: 1772494785.0
[2026-03-03 03:26:31] 2026-03-03 02:25:42,784 | INFO     | mean y: 2529362.116207951
[2026-03-03 03:26:31] 2026-03-03 02:25:42,784 | INFO     | intersect: 10504447897.820543
[2026-03-03 03:26:31] 2026-03-03 02:25:42,784 | INFO     | chi2: 1.7770094190877388
[2026-03-03 03:26:31] 2026-03-03 02:25:42,784 | INFO     | current chi2=1.7770094190877388 (change=53.53326000758803 %)
[2026-03-03 03:26:31] 2026-03-03 02:25:42,785 | INFO     | sum of square deviations: 10352419220.5
[2026-03-03 03:26:31] 2026-03-03 02:25:42,804 | INFO     | sum of deviations: -68554983528.99998
[2026-03-03 03:26:31] 2026-03-03 02:25:42,804 | INFO     | mean x: 1772494937.5
[2026-03-03 03:26:31] 2026-03-03 02:25:42,804 | INFO     | mean y: 2530676.7763975156
[2026-03-03 03:26:31] 2026-03-03 02:25:42,804 | INFO     | intersect: 11740208475.307388
[2026-03-03 03:26:31] 2026-03-03 02:25:42,805 | INFO     | chi2: 1.7289568808087188
[2026-03-03 03:26:31] 2026-03-03 02:25:42,805 | INFO     | current chi2=1.7289568808087188 (change=2.7041240053577593 %)
[2026-03-03 03:26:31] 2026-03-03 02:25:42,805 | INFO     | left removable region: 30
[2026-03-03 03:26:31] 2026-03-03 02:25:42,806 | INFO     | sum of square deviations: 8456158550.0
[2026-03-03 03:26:31] 2026-03-03 02:25:42,809 | INFO     | sum of deviations: 6995917064.999999
[2026-03-03 03:26:31] 2026-03-03 02:25:42,809 | INFO     | mean x: 1772495212.0
[2026-03-03 03:26:31] 2026-03-03 02:25:42,809 | INFO     | mean y: 2533907.0531561463
[2026-03-03 03:26:31] 2026-03-03 02:25:42,809 | INFO     | intersect: -1463880118.6466804
[2026-03-03 03:26:31] 2026-03-03 02:25:42,810 | INFO     | chi2: 0.029193065482059126
[2026-03-03 03:26:31] 2026-03-03 02:25:42,810 | INFO     | current memory leak: 0.83 B/s (using 301 data points, chi2=0.03)
[2026-03-03 03:26:31] 2026-03-03 02:25:42,811 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-03-03 03:26:31] 2026-03-03 02:25:42,811 | INFO     | ..............................
[2026-03-03 03:26:31] 2026-03-03 02:25:42,811 | INFO     | . Timing measurements:
[2026-03-03 03:26:31] 2026-03-03 02:25:42,811 | INFO     | . get job = 0 s
[2026-03-03 03:26:31] 2026-03-03 02:25:42,812 | INFO     | . initial setup = 120 s
[2026-03-03 03:26:31] 2026-03-03 02:25:42,812 | INFO     | . payload setup = 149 s
[2026-03-03 03:26:31] 2026-03-03 02:25:42,812 | INFO     | . stage-in = 0 s
[2026-03-03 03:26:31] 2026-03-03 02:25:42,812 | INFO     | . payload execution = 20643 s
[2026-03-03 03:26:31] 2026-03-03 02:25:42,812 | INFO     | . stage-out = 4 s
[2026-03-03 03:26:31] 2026-03-03 02:25:42,812 | INFO     | . log creation = 1 s
[2026-03-03 03:26:31] 2026-03-03 02:25:42,812 | INFO     | ..............................
[2026-03-03 03:26:31] 2026-03-03 02:25:43,327 | INFO     | 
[2026-03-03 03:26:31] 2026-03-03 02:25:43,327 | INFO     | job summary report
[2026-03-03 03:26:31] 2026-03-03 02:25:43,327 | INFO     | --------------------------------------------------
[2026-03-03 03:26:31] 2026-03-03 02:25:43,327 | INFO     | PanDA job id: 7035840150
[2026-03-03 03:26:31] 2026-03-03 02:25:43,327 | INFO     | task id: 48847001
[2026-03-03 03:26:31] 2026-03-03 02:25:43,327 | INFO     | errors: (none)
[2026-03-03 03:26:31] 2026-03-03 02:25:43,328 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 03:26:31] 2026-03-03 02:25:43,328 | INFO     | pilot state: finished 
[2026-03-03 03:26:31] 2026-03-03 02:25:43,328 | INFO     | transexitcode: 0
[2026-03-03 03:26:31] 2026-03-03 02:25:43,328 | INFO     | exeerrorcode: 0
[2026-03-03 03:26:31] 2026-03-03 02:25:43,328 | INFO     | exeerrordiag: 
[2026-03-03 03:26:31] 2026-03-03 02:25:43,328 | INFO     | exitcode: 0
[2026-03-03 03:26:31] 2026-03-03 02:25:43,328 | INFO     | exitmsg: OK
[2026-03-03 03:26:31] 2026-03-03 02:25:43,328 | INFO     | cpuconsumptiontime: 79280 s
[2026-03-03 03:26:31] 2026-03-03 02:25:43,328 | INFO     | nevents: 400
[2026-03-03 03:26:31] 2026-03-03 02:25:43,328 | INFO     | neventsw: 0
[2026-03-03 03:26:31] 2026-03-03 02:25:43,329 | INFO     | pid: 5787
[2026-03-03 03:26:31] 2026-03-03 02:25:43,329 | INFO     | pgrp: 5787
[2026-03-03 03:26:31] 2026-03-03 02:25:43,329 | INFO     | corecount: 8
[2026-03-03 03:26:31] 2026-03-03 02:25:43,329 | INFO     | event service: False
[2026-03-03 03:26:31] 2026-03-03 02:25:43,329 | INFO     | sizes: {0: 2281253, 1: 2247666, 2: 2282372, 13: 2282400, 20797: 2315925, 20802: 2324925, 20804: 2325109, 20805: 2325303}
[2026-03-03 03:26:31] 2026-03-03 02:25:43,329 | INFO     | --------------------------------------------------
[2026-03-03 03:26:31] 2026-03-03 02:25:43,329 | INFO     | 
[2026-03-03 03:26:31] 2026-03-03 02:25:43,329 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-03-03 03:26:31] 2026-03-03 02:25:43,881 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,882 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,882 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,882 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,882 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,882 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,882 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,882 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,882 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,883 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,883 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,883 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,883 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,883 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,883 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,883 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,883 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,883 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 03:26:31] 2026-03-03 02:25:43,884 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,884 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 03:26:31] 2026-03-03 02:25:43,884 | INFO     | job 7035840150 has completed (purged errors)
[2026-03-03 03:26:31] 2026-03-03 02:25:43,884 | INFO     | overall cleanup function is called
[2026-03-03 03:26:31] 2026-03-03 02:25:44,893 | INFO     | --- collectZombieJob: --- 10, [5787]
[2026-03-03 03:26:31] 2026-03-03 02:25:44,893 | INFO     | zombie collector waiting for pid 5787
[2026-03-03 03:26:31] 2026-03-03 02:25:44,893 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 03:26:31] 2026-03-03 02:25:44,893 | INFO     | collected zombie processes
[2026-03-03 03:26:31] 2026-03-03 02:25:44,893 | INFO     | will attempt to kill all subprocesses of pid=5787
[2026-03-03 03:26:31] 2026-03-03 02:25:44,991 | INFO     | process IDs to be killed: [5787] (in reverse order)
[2026-03-03 03:26:31] 2026-03-03 02:25:45,936 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 03:26:31] 2026-03-03 02:25:45,937 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 03:26:31] 2026-03-03 02:25:45,939 | INFO     | did not find any defunct processes belonging to 5787
[2026-03-03 03:26:31] 2026-03-03 02:25:45,941 | INFO     | did not find any defunct processes belonging to 5787
[2026-03-03 03:26:31] 2026-03-03 02:25:45,941 | INFO     | ready for new job
[2026-03-03 03:26:31] 2026-03-03 02:25:45,941 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 03:26:31] 2026-03-03 02:25:45,943 | INFO     | **************************************
[2026-03-03 03:26:31] 2026-03-03 02:25:45,944 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 03:26:31] 2026-03-03 02:25:45,944 | INFO     | **************************************
[2026-03-03 03:26:31] 2026-03-03 02:25:45,944 | INFO     | 
[2026-03-03 03:26:31] 2026-03-03 02:25:45,951 | INFO     | pilot is running in a VM
[2026-03-03 03:26:31] 2026-03-03 02:25:45,951 | INFO     | architecture information:
[2026-03-03 03:26:31] 2026-03-03 02:25:45,967 | INFO     | executing command: cat /etc/os-release
[2026-03-03 03:26:31] 2026-03-03 02:25:46,171 | INFO     | cat /etc/os-release:
[2026-03-03 03:26:31] NAME="CentOS Linux"
[2026-03-03 03:26:31] VERSION="7 (Core)"
[2026-03-03 03:26:31] ID="centos"
[2026-03-03 03:26:31] ID_LIKE="rhel fedora"
[2026-03-03 03:26:31] VERSION_ID="7"
[2026-03-03 03:26:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 03:26:31] ANSI_COLOR="0;31"
[2026-03-03 03:26:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 03:26:31] HOME_URL="https://www.centos.org/"
[2026-03-03 03:26:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 03:26:31] 
[2026-03-03 03:26:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 03:26:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 03:26:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 03:26:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 03:26:31] 
[2026-03-03 03:26:31] 2026-03-03 02:25:46,172 | INFO     | **************************************
[2026-03-03 03:26:31] 2026-03-03 02:25:46,675 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-03-03 03:26:31] 2026-03-03 02:25:46,929 | INFO     | sufficient remaining disk space (495758344192 B)
[2026-03-03 03:26:31] 2026-03-03 02:25:46,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 03:26:31] 2026-03-03 02:25:46,930 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 03:26:31] 2026-03-03 02:25:46,930 | INFO     | update_server=False
[2026-03-03 03:26:31] 2026-03-03 02:25:46,930 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 03:26:31] 2026-03-03 02:25:47,070 | INFO     | all job control threads have been joined
[2026-03-03 03:26:31] 2026-03-03 02:25:47,514 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 03:26:31] 2026-03-03 02:25:47,514 | INFO     | aborting loop
[2026-03-03 03:26:31] 2026-03-03 02:25:47,562 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 03:26:31] 2026-03-03 02:25:47,859 | INFO     | all payload control threads have been joined
[2026-03-03 03:26:31] 2026-03-03 02:25:47,902 | INFO     | all data control threads have been joined
[2026-03-03 03:26:31] 2026-03-03 02:25:47,936 | INFO     | [job] retrieve thread has finished
[2026-03-03 03:26:31] 2026-03-03 02:25:47,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 03:26:31] 2026-03-03 02:25:47,985 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 03:26:31] 2026-03-03 02:25:48,076 | INFO     | [job] control thread has finished
[2026-03-03 03:26:31] 2026-03-03 02:25:48,346 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 03:26:31] 2026-03-03 02:25:48,399 | INFO     | [data] copytool_in thread has finished
[2026-03-03 03:26:31] 2026-03-03 02:25:48,434 | INFO     | [job] validate thread has finished
[2026-03-03 03:26:31] 2026-03-03 02:25:48,520 | INFO     | [job] job monitor thread has finished
[2026-03-03 03:26:31] 2026-03-03 02:25:48,865 | INFO     | [payload] control thread has finished
[2026-03-03 03:26:31] 2026-03-03 02:25:48,888 | INFO     | [payload] validate_post thread has finished
[2026-03-03 03:26:31] 2026-03-03 02:25:48,908 | INFO     | [data] control thread has finished
[2026-03-03 03:26:31] 2026-03-03 02:25:48,991 | INFO     | [job] queue monitor thread has finished
[2026-03-03 03:26:31] 2026-03-03 02:25:49,150 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 03:26:31] 2026-03-03 02:25:49,156 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 03:26:31] 2026-03-03 02:25:49,277 | INFO     | [payload] failed_post thread has finished
[2026-03-03 03:26:31] 2026-03-03 02:25:49,350 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 03:26:31] 2026-03-03 02:25:49,569 | INFO     | [data] copytool_out thread has finished
[2026-03-03 03:26:31] 2026-03-03 02:25:51,969 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 03:26:31] 2026-03-03 02:26:15,050 | INFO     | PID=1336 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-03 03:26:31] 2026-03-03 02:26:15,050 | INFO     | .. there are 2 such processes running
[2026-03-03 03:26:31] 2026-03-03 02:26:15,052 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 03:26:31] 2026-03-03 02:26:15,052 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 03:26:31] 2026-03-03 02:26:15,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 03:26:31] 2026-03-03 02:26:19,212 | INFO     | [monitor] cgroup control has ended
[2026-03-03 03:26:31] 2026-03-03 02:26:20,848 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140696002410304)>', '<ExcThread(monitor, started 140695713068800)>']
[2026-03-03 03:26:31] 2026-03-03 02:26:21,088 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 03:26:31] 2026-03-03 02:26:21,088 | INFO     | [monitor] control thread has ended
[2026-03-03 03:26:31] 2026-03-03 02:26:25,874 | INFO     | all workflow threads have been joined
[2026-03-03 03:26:31] 2026-03-03 02:26:25,874 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 03:26:31] 2026-03-03 02:26:25,874 | INFO     | traces error code: 0
[2026-03-03 03:26:31] 2026-03-03 02:26:25,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 03:26:31] 2026-03-03 02:26:26,340 [wrapper] ==== pilot stdout END ====
[2026-03-03 03:26:31] 2026-03-03 02:26:26,433 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 03:26:31] 2026-03-03 02:26:26,506 [wrapper] pilotpid: 1336
[2026-03-03 03:26:31] 2026-03-03 02:26:26,630 [wrapper] Pilot exit status: 0
[2026-03-03 03:26:31] 2026-03-03 02:26:27,035 [wrapper] pandaids: 7035840150
[2026-03-03 03:26:31] 2026-03-03 02:26:27,840 [wrapper] cleanup supervisor_pilot 12546 1337
[2026-03-03 03:26:31] 2026-03-03 02:26:27,947 [wrapper] Test setup, not cleaning
[2026-03-03 03:26:31] 2026-03-03 02:26:28,049 [wrapper] apfmon messages muted
[2026-03-03 03:26:31] 2026-03-03 02:26:28,168 [wrapper] ==== wrapper stdout END ====
[2026-03-03 03:26:31] 2026-03-03 02:26:28,260 [wrapper] ==== wrapper stderr END ====
[2026-03-03 03:26:31]  *** Error codes and diagnostics ***
[2026-03-03 03:26:31]     "exeErrorCode": 0,
[2026-03-03 03:26:31]     "exeErrorDiag": "",
[2026-03-03 03:26:31]     "pilotErrorCode": 0,
[2026-03-03 03:26:31]     "pilotErrorDiag": "",
[2026-03-03 03:26:31]  *** Listing of results directory ***
[2026-03-03 03:26:31] total 493008
[2026-03-03 03:26:31] -rw-r--r--. 1 boinc boinc    584627 Mar  2 05:46 pilot3.tar.gz
[2026-03-03 03:26:31] -rwx------. 1 boinc boinc     36322 Mar  2 05:50 runpilot2-wrapper.sh
[2026-03-03 03:26:31] -rw-r--r--. 1 boinc boinc      5111 Mar  2 05:51 queuedata.json
[2026-03-03 03:26:31] -rw-r--r--. 1 boinc boinc       100 Mar  2 21:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 03:26:31] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 21:31 run_atlas
[2026-03-03 03:26:31] -rw-r--r--. 1 boinc boinc       105 Mar  2 21:31 job.xml
[2026-03-03 03:26:31] -rw-r--r--. 1 boinc boinc      6392 Mar  2 21:31 init_data.xml
[2026-03-03 03:26:31] -rw-r--r--. 2 boinc boinc 276401731 Mar  2 21:31 EVNT.48452755._000002.pool.root.1
[2026-03-03 03:26:31] -rw-r--r--. 2 boinc boinc     15845 Mar  2 21:31 start_atlas.sh
[2026-03-03 03:26:31] drwxrwx--x. 2 boinc boinc        68 Mar  2 21:31 shared
[2026-03-03 03:26:31] -rw-r--r--. 2 boinc boinc    597957 Mar  2 21:31 input.tar.gz
[2026-03-03 03:26:31] -rw-r--r--. 1 boinc boinc         0 Mar  2 21:31 boinc_lockfile
[2026-03-03 03:26:31] -rw-r--r--. 1 boinc boinc      2617 Mar  2 21:32 pandaJob.out
[2026-03-03 03:26:31] -rw-------. 1 boinc boinc       415 Mar  2 21:38 workernode_map.json
[2026-03-03 03:26:31] -rw-------. 1 boinc boinc    998454 Mar  2 21:38 agis_schedconf.cvmfs.json
[2026-03-03 03:26:31] drwx------. 5 boinc boinc      4096 Mar  2 21:38 pilot3
[2026-03-03 03:26:31] -rw-------. 1 boinc boinc 217621623 Mar  3 03:24 HITS.48847001._000036.pool.root.1
[2026-03-03 03:26:31] -rw-r--r--. 1 boinc boinc       531 Mar  3 03:24 boinc_task_state.xml
[2026-03-03 03:26:31] -rw-------. 1 boinc boinc      1011 Mar  3 03:25 memory_monitor_summary.json
[2026-03-03 03:26:31] -rw-------. 1 boinc boinc   1512931 Mar  3 03:25 agis_ddmendpoints.agis.ALL.json
[2026-03-03 03:26:31] -rw-------. 1 boinc boinc    547281 Mar  3 03:25 log.48847001._000036.job.log.tgz.1
[2026-03-03 03:26:31] -rw-------. 1 boinc boinc      6306 Mar  3 03:25 heartbeat.json
[2026-03-03 03:26:31] -rw-------. 1 boinc boinc        95 Mar  3 03:26 pilot_heartbeat.json
[2026-03-03 03:26:31] -rw-------. 1 boinc boinc      4880 Mar  3 03:26 pilotlog.txt
[2026-03-03 03:26:31] -rw-------. 1 boinc boinc   2903215 Mar  3 03:26 log.48847001._000036.job.log.1
[2026-03-03 03:26:31] -rw-------. 1 boinc boinc       357 Mar  3 03:26 output.list
[2026-03-03 03:26:31] -rw-r--r--. 1 boinc boinc       620 Mar  3 03:26 runtime_log
[2026-03-03 03:26:31] -rw-------. 1 boinc boinc   3471360 Mar  3 03:26 result.tar.gz
[2026-03-03 03:26:31] -rw-r--r--. 1 boinc boinc      8192 Mar  3 03:26 boinc_mmap_file
[2026-03-03 03:26:31] -rw-r--r--. 1 boinc boinc      8832 Mar  3 03:26 runtime_log.err
[2026-03-03 03:26:31] -rw-------. 1 boinc boinc       656 Mar  3 03:26 8FaNDmiPAH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmpgALDmLa4wGn.diag
[2026-03-03 03:26:31] -rw-r--r--. 1 boinc boinc        28 Mar  3 03:26 wrapper_checkpoint.txt
[2026-03-03 03:26:31] -rw-r--r--. 1 boinc boinc     20719 Mar  3 03:26 stderr.txt
[2026-03-03 03:26:31] HITS file was successfully produced:
[2026-03-03 03:26:31] -rw-------. 1 boinc boinc 217621623 Mar  3 03:24 shared/HITS.pool.root.1
[2026-03-03 03:26:31]  *** Contents of shared directory: ***
[2026-03-03 03:26:31] total 486440
[2026-03-03 03:26:31] -rw-r--r--. 2 boinc boinc 276401731 Mar  2 21:31 ATLAS.root_0
[2026-03-03 03:26:31] -rw-r--r--. 2 boinc boinc     15845 Mar  2 21:31 start_atlas.sh
[2026-03-03 03:26:31] -rw-r--r--. 2 boinc boinc    597957 Mar  2 21:31 input.tar.gz
[2026-03-03 03:26:31] -rw-------. 1 boinc boinc 217621623 Mar  3 03:24 HITS.pool.root.1
[2026-03-03 03:26:31] -rw-------. 1 boinc boinc   3471360 Mar  3 03:26 result.tar.gz
03:26:33 (29753): run_atlas exited; CPU time 79507.716623
03:26:33 (29753): called boinc_finish(0)

</stderr_txt>
]]>

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