Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:58:38 (1343909): wrapper (7.7.26015): starting
01:58:38 (1343909): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 01:58:38] Arguments: --nthreads 4
[2026-03-03 01:58:38] Threads: 4
[2026-03-03 01:58:38] Checking for CVMFS
[2026-03-03 01:58:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 01:58:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 01:58:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 01:58:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 01:58:39] 2.9.2.0 16149 7755 98772 156826 2 50 28294197 36864000 0 130560 0 3791571 99.984 297198 15508 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-03 01:58:39] CVMFS is ok
[2026-03-03 01:58:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 01:58:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 01:58:39] Further information can be found at the LHC@home message board.
[2026-03-03 01:58:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 01:58:39] Checking for apptainer binary...
[2026-03-03 01:58:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 01:58:39] Running /usr/bin/apptainer --version
[2026-03-03 01:58:39] apptainer version 1.4.1-1.1
[2026-03-03 01:58:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 01:58:39] thA369a
[2026-03-03 01:58:39] apptainer works
[2026-03-03 01:58:39] Set ATHENA_PROC_NUMBER=4
[2026-03-03 01:58:39] Set ATHENA_CORE_NUMBER=4
[2026-03-03 01:58:39] Starting ATLAS job with PandaID=7035803681
[2026-03-03 01:58:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 04:12:06]  *** The last 200 lines of the pilot log: ***
[2026-03-03 04:12:06] 2026-03-03 03:11:36,491 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 04:12:06] 2026-03-03 03:11:36,975 | INFO     | all payload control threads have been joined
[2026-03-03 04:12:06] 2026-03-03 03:11:37,295 | INFO     | all data control threads have been joined
[2026-03-03 04:12:06] 2026-03-03 03:11:37,497 | INFO     | [job] retrieve thread has finished
[2026-03-03 04:12:06] 2026-03-03 03:11:37,497 | INFO     | [job] queue monitor thread has finished
[2026-03-03 04:12:06] 2026-03-03 03:11:37,604 | INFO     | all job control threads have been joined
[2026-03-03 04:12:06] 2026-03-03 03:11:37,981 | INFO     | [payload] control thread has finished
[2026-03-03 04:12:06] 2026-03-03 03:11:38,096 | INFO     | [job] validate thread has finished
[2026-03-03 04:12:06] 2026-03-03 03:11:38,125 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 04:12:06] 2026-03-03 03:11:38,248 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 04:12:06] 2026-03-03 03:11:38,277 | WARNING  | process 1352509 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 04:12:06] 2026-03-03 03:11:38,290 | INFO     | [payload] failed_post thread has finished
[2026-03-03 04:12:06] 2026-03-03 03:11:38,300 | INFO     | [data] control thread has finished
[2026-03-03 04:12:06] 2026-03-03 03:11:38,307 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 04:12:06] 2026-03-03 03:11:38,330 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 04:12:06] 2026-03-03 03:11:38,345 | INFO     | number of running child processes to parent process 1352509: 1
[2026-03-03 04:12:06] 2026-03-03 03:11:38,345 | INFO     | maximum number of monitored processes: 6
[2026-03-03 04:12:06] 2026-03-03 03:11:38,345 | INFO     | aborting job monitoring since job object (job id=7035803681) has expired
[2026-03-03 04:12:06] 2026-03-03 03:11:38,345 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 04:12:06] 2026-03-03 03:11:38,345 | INFO     | will abort loop
[2026-03-03 04:12:06] 2026-03-03 03:11:38,378 | INFO     | [data] copytool_in thread has finished
[2026-03-03 04:12:06] 2026-03-03 03:11:38,459 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 04:12:06] 2026-03-03 03:11:38,497 | INFO     | [data] copytool_out thread has finished
[2026-03-03 04:12:06] 2026-03-03 03:11:38,610 | INFO     | [job] control thread has finished
[2026-03-03 04:12:06] 2026-03-03 03:11:38,824 | INFO     | [payload] validate_post thread has finished
[2026-03-03 04:12:06] 2026-03-03 03:11:39,351 | INFO     | [job] job monitor thread has finished
[2026-03-03 04:12:06] 2026-03-03 03:11:39,401 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 04:12:06] 2026-03-03 03:11:43,408 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 04:12:06] 2026-03-03 03:11:59,311 | INFO     | [monitor] cgroup control has ended
[2026-03-03 04:12:06] 2026-03-03 03:12:01,302 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140418682722112)>', '<ExcThread(monitor, started 140417890764544)>']
[2026-03-03 04:12:06] 2026-03-03 03:12:06,328 | INFO     | all workflow threads have been joined
[2026-03-03 04:12:06] 2026-03-03 03:12:06,328 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 04:12:06] 2026-03-03 03:12:06,328 | INFO     | traces error code: 0
[2026-03-03 04:12:06] 2026-03-03 03:12:06,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 04:12:06] 2026-03-03 03:12:06,767 | INFO     | PID=1348004 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 04:12:06] 2026-03-03 03:12:06,767 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 04:12:06] 2026-03-03 03:12:06,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 04:12:06] 2026-03-03 03:12:06,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 04:12:06] 2026-03-03 03:12:06,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 04:12:06] 2026-03-03 03:12:06,767 | INFO     | [monitor] control thread has ended
[2026-03-03 04:12:06] 2026-03-03 03:12:06,817 [wrapper] ==== pilot stdout END ====
[2026-03-03 04:12:06] 2026-03-03 03:12:06,820 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 04:12:06] 2026-03-03 03:12:06,823 [wrapper] pilotpid: 1348004
[2026-03-03 04:12:06] 2026-03-03 03:12:06,825 [wrapper] Pilot exit status: 0
[2026-03-03 04:12:06] 2026-03-03 03:12:06,833 [wrapper] pandaids: 7035803681
[2026-03-03 04:12:06] 2026-03-03 03:12:06,851 [wrapper] cleanup supervisor_pilot 1358255 1348005
[2026-03-03 04:12:06] 2026-03-03 03:12:06,853 [wrapper] Test setup, not cleaning
[2026-03-03 04:12:06] 2026-03-03 03:12:06,856 [wrapper] apfmon messages muted
[2026-03-03 04:12:06] 2026-03-03 03:12:06,859 [wrapper] ==== wrapper stdout END ====
[2026-03-03 04:12:06] 2026-03-03 03:12:06,861 [wrapper] ==== wrapper stderr END ====
[2026-03-03 04:12:06]  *** Error codes and diagnostics ***
[2026-03-03 04:12:06]     "exeErrorCode": 0,
[2026-03-03 04:12:06]     "exeErrorDiag": "",
[2026-03-03 04:12:06]     "pilotErrorCode": 0,
[2026-03-03 04:12:06]     "pilotErrorDiag": "",
[2026-03-03 04:12:06]  *** Listing of results directory ***
[2026-03-03 04:12:06] total 365248
[2026-03-03 04:12:06] -rw-r--r-- 1 boinc boinc    584627 Mar  2 03:17 pilot3.tar.gz
[2026-03-03 04:12:06] -rw-r--r-- 1 boinc boinc      5111 Mar  2 03:27 queuedata.json
[2026-03-03 04:12:06] -rwx------ 1 boinc boinc     36322 Mar  2 03:28 runpilot2-wrapper.sh
[2026-03-03 04:12:06] -rw-r--r-- 1 boinc boinc       100 Mar  3 01:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 04:12:06] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 01:58 run_atlas
[2026-03-03 04:12:06] -rw-r--r-- 1 boinc boinc       105 Mar  3 01:58 job.xml
[2026-03-03 04:12:06] -rw-r--r-- 2 boinc boinc 217877483 Mar  3 01:58 EVNT.48448413._000006.pool.root.1
[2026-03-03 04:12:06] -rw-r--r-- 2 boinc boinc    597974 Mar  3 01:58 input.tar.gz
[2026-03-03 04:12:06] -rw-r--r-- 2 boinc boinc     15845 Mar  3 01:58 start_atlas.sh
[2026-03-03 04:12:06] drwxrwx--x 2 boinc boinc      4096 Mar  3 01:58 shared
[2026-03-03 04:12:06] -rw-r--r-- 1 boinc boinc         0 Mar  3 01:58 boinc_setup_complete
[2026-03-03 04:12:06] -rw-r--r-- 1 boinc boinc      6443 Mar  3 01:58 init_data.xml
[2026-03-03 04:12:06] -rw-r--r-- 1 boinc boinc         0 Mar  3 01:58 boinc_lockfile
[2026-03-03 04:12:06] -rw-r--r-- 1 boinc boinc      2611 Mar  3 01:58 pandaJob.out
[2026-03-03 04:12:06] -rw------- 1 boinc boinc    997714 Mar  3 01:58 agis_schedconf.cvmfs.json
[2026-03-03 04:12:06] -rw------- 1 boinc boinc   1512931 Mar  3 01:58 agis_ddmendpoints.agis.ALL.json
[2026-03-03 04:12:06] -rw------- 1 boinc boinc       416 Mar  3 01:58 workernode_map.json
[2026-03-03 04:12:06] drwx------ 5 boinc boinc      4096 Mar  3 01:58 pilot3
[2026-03-03 04:12:06] -rw------- 1 boinc boinc 149320284 Mar  3 04:11 HITS.48844169._000063.pool.root.1
[2026-03-03 04:12:06] -rw-r--r-- 1 boinc boinc       529 Mar  3 04:11 boinc_task_state.xml
[2026-03-03 04:12:06] -rw------- 1 boinc boinc      1014 Mar  3 04:11 memory_monitor_summary.json
[2026-03-03 04:12:06] -rw------- 1 boinc boinc        95 Mar  3 04:11 pilot_heartbeat.json
[2026-03-03 04:12:06] -rw------- 1 boinc boinc    312150 Mar  3 04:11 log.48844169._000063.job.log.tgz.1
[2026-03-03 04:12:06] -rw------- 1 boinc boinc      6284 Mar  3 04:11 heartbeat.json
[2026-03-03 04:12:06] -rw-r--r-- 1 boinc boinc        27 Mar  3 04:12 wrapper_checkpoint.txt
[2026-03-03 04:12:06] -rw-r--r-- 1 boinc boinc      8192 Mar  3 04:12 boinc_mmap_file
[2026-03-03 04:12:06] -rw------- 1 boinc boinc       747 Mar  3 04:12 pilotlog.txt
[2026-03-03 04:12:06] -rw------- 1 boinc boinc   1142122 Mar  3 04:12 log.48844169._000063.job.log.1
[2026-03-03 04:12:06] -rw------- 1 boinc boinc       357 Mar  3 04:12 output.list
[2026-03-03 04:12:06] -rw-r--r-- 1 boinc boinc       620 Mar  3 04:12 runtime_log
[2026-03-03 04:12:06] -rw------- 1 boinc boinc   1474560 Mar  3 04:12 result.tar.gz
[2026-03-03 04:12:06] -rw-r--r-- 1 boinc boinc      8901 Mar  3 04:12 runtime_log.err
[2026-03-03 04:12:06] -rw------- 1 boinc boinc       658 Mar  3 04:12 fHEMDmEC8G9n9Rq4apOajLDm4fhM0noT9bVooX4SDmPVALDmYscKDn.diag
[2026-03-03 04:12:06] -rw-r--r-- 1 boinc boinc      7700 Mar  3 04:12 stderr.txt
[2026-03-03 04:12:06] HITS file was successfully produced:
[2026-03-03 04:12:06] -rw------- 1 boinc boinc 149320284 Mar  3 04:11 shared/HITS.pool.root.1
[2026-03-03 04:12:06]  *** Contents of shared directory: ***
[2026-03-03 04:12:06] total 360640
[2026-03-03 04:12:06] -rw-r--r-- 2 boinc boinc 217877483 Mar  3 01:58 ATLAS.root_0
[2026-03-03 04:12:06] -rw-r--r-- 2 boinc boinc    597974 Mar  3 01:58 input.tar.gz
[2026-03-03 04:12:06] -rw-r--r-- 2 boinc boinc     15845 Mar  3 01:58 start_atlas.sh
[2026-03-03 04:12:06] -rw------- 1 boinc boinc 149320284 Mar  3 04:11 HITS.pool.root.1
[2026-03-03 04:12:06] -rw------- 1 boinc boinc   1474560 Mar  3 04:12 result.tar.gz
04:12:08 (1343909): run_atlas exited; CPU time 30687.168995
04:12:08 (1343909): called boinc_finish(0)

</stderr_txt>
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