Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:48:07 (736447): wrapper (7.7.26015): starting
22:48:07 (736447): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 22:48:07] Arguments: --nthreads 4
[2026-03-02 22:48:07] Threads: 4
[2026-03-02 22:48:07] Checking for CVMFS
[2026-03-02 22:48:07] No cvmfs_config command found, will try listing directly
[2026-03-02 22:48:07] CVMFS is ok
[2026-03-02 22:48:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 22:48:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 22:48:07] Further information can be found at the LHC@home message board.
[2026-03-02 22:48:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 22:48:07] Checking for apptainer binary...
[2026-03-02 22:48:07] which: no apptainer in ((null))
[2026-03-02 22:48:07] apptainer is not installed, using version from CVMFS
[2026-03-02 22:48:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 22:48:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-02 22:48:07] apptainer works
[2026-03-02 22:48:07] Set ATHENA_PROC_NUMBER=4
[2026-03-02 22:48:07] Set ATHENA_CORE_NUMBER=4
[2026-03-02 22:48:07] Starting ATLAS job with PandaID=7035840862
[2026-03-02 22:48:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:51:32 (1092629): wrapper (7.7.26015): starting
04:51:32 (1092629): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 04:51:32] Arguments: --nthreads 4
[2026-03-03 04:51:32] Threads: 4
[2026-03-03 04:51:32] This job has been restarted, cleaning up previous attempt
[2026-03-03 04:51:32] Checking for CVMFS
[2026-03-03 04:51:32] No cvmfs_config command found, will try listing directly
[2026-03-03 04:51:32] CVMFS is ok
[2026-03-03 04:51:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 04:51:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 04:51:32] Further information can be found at the LHC@home message board.
[2026-03-03 04:51:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 04:51:32] Checking for apptainer binary...
[2026-03-03 04:51:32] which: no apptainer in ((null))
[2026-03-03 04:51:32] apptainer is not installed, using version from CVMFS
[2026-03-03 04:51:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 04:51:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-03 04:51:32] apptainer works
[2026-03-03 04:51:32] Set ATHENA_PROC_NUMBER=4
[2026-03-03 04:51:32] Set ATHENA_CORE_NUMBER=4
[2026-03-03 04:51:32] Starting ATLAS job with PandaID=7035840862
[2026-03-03 04:51:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 10:41:18]  *** The last 200 lines of the pilot log: ***
[2026-03-03 10:41:18] 2026-03-03 09:25:36,109 | INFO     | current chi2=0.008671051235134609 (change=99.32182819001751 %)
[2026-03-03 10:41:18] 2026-03-03 09:25:36,109 | INFO     | sum of square deviations: 9971385099.5
[2026-03-03 10:41:18] 2026-03-03 09:25:36,112 | INFO     | sum of deviations: 7078841898.499999
[2026-03-03 10:41:18] 2026-03-03 09:25:36,112 | INFO     | mean x: 1772520207.5
[2026-03-03 10:41:18] 2026-03-03 09:25:36,112 | INFO     | mean y: 2359290.0849056602
[2026-03-03 10:41:18] 2026-03-03 09:25:36,112 | INFO     | intersect: -1255980467.690379
[2026-03-03 10:41:18] 2026-03-03 09:25:36,113 | INFO     | chi2: 0.006049846243720299
[2026-03-03 10:41:18] 2026-03-03 09:25:36,113 | INFO     | current chi2=0.006049846243720299 (change=30.229379579644682 %)
[2026-03-03 10:41:18] 2026-03-03 09:25:36,113 | INFO     | sum of square deviations: 9508390372.0
[2026-03-03 10:41:18] 2026-03-03 09:25:36,116 | INFO     | sum of deviations: 9636296757.999998
[2026-03-03 10:41:18] 2026-03-03 09:25:36,116 | INFO     | mean x: 1772520360.0
[2026-03-03 10:41:18] 2026-03-03 09:25:36,116 | INFO     | mean y: 2358450.178913738
[2026-03-03 10:41:18] 2026-03-03 09:25:36,116 | INFO     | intersect: -1794005763.984525
[2026-03-03 10:41:18] 2026-03-03 09:25:36,117 | INFO     | chi2: 0.0022684581504504803
[2026-03-03 10:41:18] 2026-03-03 09:25:36,117 | INFO     | current chi2=0.0022684581504504803 (change=62.50387102308386 %)
[2026-03-03 10:41:18] 2026-03-03 09:25:36,118 | INFO     | sum of square deviations: 9059954057.0
[2026-03-03 10:41:18] 2026-03-03 09:25:36,120 | INFO     | sum of deviations: 10535259705.499998
[2026-03-03 10:41:18] 2026-03-03 09:25:36,120 | INFO     | mean x: 1772520512.5
[2026-03-03 10:41:18] 2026-03-03 09:25:36,120 | INFO     | mean y: 2358144.477272727
[2026-03-03 10:41:18] 2026-03-03 09:25:36,121 | INFO     | intersect: -2058796229.488385
[2026-03-03 10:41:18] 2026-03-03 09:25:36,121 | INFO     | chi2: 0.0014935134567607591
[2026-03-03 10:41:18] 2026-03-03 09:25:36,121 | INFO     | current chi2=0.0014935134567607591 (change=34.161736399493606 %)
[2026-03-03 10:41:18] 2026-03-03 09:25:36,122 | INFO     | sum of square deviations: 8625843592.0
[2026-03-03 10:41:18] 2026-03-03 09:25:36,124 | INFO     | sum of deviations: 10328263434.000002
[2026-03-03 10:41:18] 2026-03-03 09:25:36,124 | INFO     | mean x: 1772520665.0
[2026-03-03 10:41:18] 2026-03-03 09:25:36,124 | INFO     | mean y: 2358221.168316832
[2026-03-03 10:41:18] 2026-03-03 09:25:36,124 | INFO     | intersect: -2119991920.5972571
[2026-03-03 10:41:18] 2026-03-03 09:25:36,125 | INFO     | chi2: 0.0005512393392010954
[2026-03-03 10:41:18] 2026-03-03 09:25:36,125 | INFO     | current chi2=0.0005512393392010954 (change=63.091103283617976 %)
[2026-03-03 10:41:18] 2026-03-03 09:25:36,126 | INFO     | sum of square deviations: 8205826414.5
[2026-03-03 10:41:18] 2026-03-03 09:25:36,128 | INFO     | sum of deviations: 9466028586.499989
[2026-03-03 10:41:18] 2026-03-03 09:25:36,129 | INFO     | mean x: 1772520817.5
[2026-03-03 10:41:18] 2026-03-03 09:25:36,129 | INFO     | mean y: 2358533.3389261747
[2026-03-03 10:41:18] 2026-03-03 09:25:36,129 | INFO     | intersect: -2042375522.8156967
[2026-03-03 10:41:18] 2026-03-03 09:25:36,129 | INFO     | chi2: 0.0004567956685853855
[2026-03-03 10:41:18] 2026-03-03 09:25:36,129 | INFO     | current chi2=0.0004567956685853855 (change=17.132970000396927 %)
[2026-03-03 10:41:18] 2026-03-03 09:25:36,130 | INFO     | left removable region: 60
[2026-03-03 10:41:18] 2026-03-03 09:25:36,130 | INFO     | sum of square deviations: 5576683165.5
[2026-03-03 10:41:18] 2026-03-03 09:25:36,132 | INFO     | sum of deviations: 5855238018.500001
[2026-03-03 10:41:18] 2026-03-03 09:25:36,132 | INFO     | mean x: 1772521549.5
[2026-03-03 10:41:18] 2026-03-03 09:25:36,132 | INFO     | mean y: 2359626.4236641224
[2026-03-03 10:41:18] 2026-03-03 09:25:36,133 | INFO     | intersect: -1858699224.7317076
[2026-03-03 10:41:18] 2026-03-03 09:25:36,133 | INFO     | chi2: 0.0004156872471753287
[2026-03-03 10:41:18] 2026-03-03 09:25:36,133 | INFO     | current memory leak: 1.05 B/s (using 262 data points, chi2=0.00)
[2026-03-03 10:41:18] 2026-03-03 09:25:36,137 | INFO     | could have reported an average CPU frequency of 2555 MHz (15 samples)
[2026-03-03 10:41:18] 2026-03-03 09:25:36,138 | INFO     | ..............................
[2026-03-03 10:41:18] 2026-03-03 09:25:36,138 | INFO     | . Timing measurements:
[2026-03-03 10:41:18] 2026-03-03 09:25:36,138 | INFO     | . get job = 0 s
[2026-03-03 10:41:18] 2026-03-03 09:25:36,138 | INFO     | . initial setup = 1 s
[2026-03-03 10:41:18] 2026-03-03 09:25:36,138 | INFO     | . payload setup = 6 s
[2026-03-03 10:41:18] 2026-03-03 09:25:36,138 | INFO     | . stage-in = 0 s
[2026-03-03 10:41:18] 2026-03-03 09:25:36,138 | INFO     | . payload execution = 20006 s
[2026-03-03 10:41:18] 2026-03-03 09:25:36,138 | INFO     | . stage-out = 1 s
[2026-03-03 10:41:18] 2026-03-03 09:25:36,138 | INFO     | . log creation = 0 s
[2026-03-03 10:41:18] 2026-03-03 09:25:36,138 | INFO     | ..............................
[2026-03-03 10:41:18] 2026-03-03 09:25:36,258 | INFO     | 
[2026-03-03 10:41:18] 2026-03-03 09:25:36,259 | INFO     | job summary report
[2026-03-03 10:41:18] 2026-03-03 09:25:36,259 | INFO     | --------------------------------------------------
[2026-03-03 10:41:18] 2026-03-03 09:25:36,259 | INFO     | PanDA job id: 7035840862
[2026-03-03 10:41:18] 2026-03-03 09:25:36,259 | INFO     | task id: 48844130
[2026-03-03 10:41:18] 2026-03-03 09:25:36,259 | INFO     | errors: (none)
[2026-03-03 10:41:18] 2026-03-03 09:25:36,259 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 10:41:18] 2026-03-03 09:25:36,259 | INFO     | pilot state: finished 
[2026-03-03 10:41:18] 2026-03-03 09:25:36,259 | INFO     | transexitcode: 0
[2026-03-03 10:41:18] 2026-03-03 09:25:36,259 | INFO     | exeerrorcode: 0
[2026-03-03 10:41:18] 2026-03-03 09:25:36,260 | INFO     | exeerrordiag: 
[2026-03-03 10:41:18] 2026-03-03 09:25:36,260 | INFO     | exitcode: 0
[2026-03-03 10:41:18] 2026-03-03 09:25:36,260 | INFO     | exitmsg: OK
[2026-03-03 10:41:18] 2026-03-03 09:25:36,260 | INFO     | cpuconsumptiontime: 76470 s
[2026-03-03 10:41:18] 2026-03-03 09:25:36,260 | INFO     | nevents: 400
[2026-03-03 10:41:18] 2026-03-03 09:25:36,260 | INFO     | neventsw: 0
[2026-03-03 10:41:18] 2026-03-03 09:25:36,260 | INFO     | pid: 1099347
[2026-03-03 10:41:18] 2026-03-03 09:25:36,260 | INFO     | pgrp: 1099347
[2026-03-03 10:41:18] 2026-03-03 09:25:36,260 | INFO     | corecount: 4
[2026-03-03 10:41:18] 2026-03-03 09:25:36,260 | INFO     | event service: False
[2026-03-03 10:41:18] 2026-03-03 09:25:36,260 | INFO     | sizes: {0: 2281957, 1: 2282418, 11: 2282418, 20017: 2315948, 20019: 2325162}
[2026-03-03 10:41:18] 2026-03-03 09:25:36,260 | INFO     | --------------------------------------------------
[2026-03-03 10:41:18] 2026-03-03 09:25:36,260 | INFO     | 
[2026-03-03 10:41:18] 2026-03-03 09:25:36,261 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2026-03-03 10:41:18] 2026-03-03 09:25:36,305 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,306 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,306 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,306 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,306 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,306 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,306 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,306 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,307 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,307 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,307 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,307 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,308 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,308 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,308 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,308 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,309 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 10:41:18] 2026-03-03 09:25:36,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,309 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 10:41:18] 2026-03-03 09:25:36,309 | INFO     | job 7035840862 has completed (purged errors)
[2026-03-03 10:41:18] 2026-03-03 09:25:36,309 | INFO     | overall cleanup function is called
[2026-03-03 10:41:18] 2026-03-03 09:25:37,317 | INFO     | --- collectZombieJob: --- 10, [1099347]
[2026-03-03 10:41:18] 2026-03-03 09:25:37,318 | INFO     | zombie collector waiting for pid 1099347
[2026-03-03 10:41:18] 2026-03-03 09:25:37,318 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 10:41:18] 2026-03-03 09:25:37,318 | INFO     | collected zombie processes
[2026-03-03 10:41:18] 2026-03-03 09:25:37,318 | INFO     | will attempt to kill all subprocesses of pid=1099347
[2026-03-03 10:41:18] 2026-03-03 09:25:37,749 | INFO     | process IDs to be killed: [1099347] (in reverse order)
[2026-03-03 10:41:18] 2026-03-03 09:25:37,916 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 10:41:18] 2026-03-03 09:25:37,916 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 10:41:18] 2026-03-03 09:25:37,929 | INFO     | did not find any defunct processes belonging to 1099347
[2026-03-03 10:41:18] 2026-03-03 09:25:37,945 | INFO     | did not find any defunct processes belonging to 1099347
[2026-03-03 10:41:18] 2026-03-03 09:25:37,945 | INFO     | ready for new job
[2026-03-03 10:41:18] 2026-03-03 09:25:37,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 10:41:18] 2026-03-03 09:25:37,948 | INFO     | **************************************
[2026-03-03 10:41:18] 2026-03-03 09:25:37,948 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 10:41:18] 2026-03-03 09:25:37,948 | INFO     | **************************************
[2026-03-03 10:41:18] 2026-03-03 09:25:37,949 | INFO     | 
[2026-03-03 10:41:18] 2026-03-03 09:25:37,953 | INFO     | architecture information:
[2026-03-03 10:41:18] 2026-03-03 09:25:37,953 | INFO     | executing command: cat /etc/os-release
[2026-03-03 10:41:18] 2026-03-03 09:25:37,977 | INFO     | cat /etc/os-release:
[2026-03-03 10:41:18] NAME="CentOS Linux"
[2026-03-03 10:41:18] VERSION="7 (Core)"
[2026-03-03 10:41:18] ID="centos"
[2026-03-03 10:41:18] ID_LIKE="rhel fedora"
[2026-03-03 10:41:18] VERSION_ID="7"
[2026-03-03 10:41:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 10:41:18] ANSI_COLOR="0;31"
[2026-03-03 10:41:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 10:41:18] HOME_URL="https://www.centos.org/"
[2026-03-03 10:41:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 10:41:18] 
[2026-03-03 10:41:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 10:41:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 10:41:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 10:41:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 10:41:18] 
[2026-03-03 10:41:18] 2026-03-03 09:25:37,977 | INFO     | **************************************
[2026-03-03 10:41:18] 2026-03-03 09:25:38,480 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2026-03-03 10:41:18] 2026-03-03 09:25:38,501 | INFO     | sufficient remaining disk space (672104710144 B)
[2026-03-03 10:41:18] 2026-03-03 09:25:38,501 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 10:41:18] 2026-03-03 09:25:38,501 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 10:41:18] 2026-03-03 09:25:38,501 | INFO     | update_server=False
[2026-03-03 10:41:18] 2026-03-03 09:25:38,501 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 10:41:18] 2026-03-03 09:25:38,502 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 10:41:18] 2026-03-03 09:25:38,816 | INFO     | all job control threads have been joined
[2026-03-03 10:41:18] 2026-03-03 09:25:38,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 10:41:18] 2026-03-03 09:25:39,016 | INFO     | all data control threads have been joined
[2026-03-03 10:41:18] 2026-03-03 09:25:39,506 | INFO     | [job] retrieve thread has finished
[2026-03-03 10:41:18] 2026-03-03 09:25:39,636 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 10:41:18] 2026-03-03 09:25:39,641 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 10:41:18] 2026-03-03 09:25:39,647 | INFO     | all payload control threads have been joined
[2026-03-03 10:41:18] 2026-03-03 09:25:39,826 | INFO     | [job] control thread has finished
[2026-03-03 10:41:18] 2026-03-03 09:25:39,944 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 10:41:18] 2026-03-03 09:25:40,002 | INFO     | [payload] validate_post thread has finished
[2026-03-03 10:41:18] 2026-03-03 09:25:40,022 | INFO     | [data] control thread has finished
[2026-03-03 10:41:18] 2026-03-03 09:25:40,093 | WARNING  | process 1099347 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 10:41:18] 2026-03-03 09:25:40,161 | INFO     | [job] validate thread has finished
[2026-03-03 10:41:18] 2026-03-03 09:25:40,324 | INFO     | [data] copytool_in thread has finished
[2026-03-03 10:41:18] 2026-03-03 09:25:40,376 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 10:41:18] 2026-03-03 09:25:40,377 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot20/slots/0/PanDA_Pilot-7035840862/payload.stdout) since it has not been created yet
[2026-03-03 10:41:18] 2026-03-03 09:25:40,377 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2026-03-03 10:41:18] 2026-03-03 09:25:40,404 | INFO     | sufficient remaining disk space (672104710144 B)
[2026-03-03 10:41:18] 2026-03-03 09:25:40,405 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-03 10:41:18] 2026-03-03 09:25:40,405 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-7035840862/HITS.48844130._000037.pool.root.1 since it does not exist
[2026-03-03 10:41:18] 2026-03-03 09:25:40,652 | INFO     | [payload] control thread has finished
[2026-03-03 10:41:18] 2026-03-03 09:25:40,796 | INFO     | [payload] failed_post thread has finished
[2026-03-03 10:41:18] 2026-03-03 09:25:40,797 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 10:41:18] 2026-03-03 09:25:40,804 | INFO     | number of running child processes to parent process 1099347: 1
[2026-03-03 10:41:18] 2026-03-03 09:25:40,805 | INFO     | maximum number of monitored processes: 6
[2026-03-03 10:41:18] 2026-03-03 09:25:40,805 | INFO     | aborting job monitoring since job object (job id=7035840862) has expired
[2026-03-03 10:41:18] 2026-03-03 09:25:40,805 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 10:41:18] 2026-03-03 09:25:40,805 | INFO     | will abort loop
[2026-03-03 10:41:18] 2026-03-03 09:25:40,953 | INFO     | [data] copytool_out thread has finished
[2026-03-03 10:41:18] 2026-03-03 09:25:41,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 10:41:18] 2026-03-03 09:25:41,810 | INFO     | [job] job monitor thread has finished
[2026-03-03 10:41:18] 2026-03-03 09:25:42,273 | INFO     | [job] queue monitor thread has finished
[2026-03-03 10:41:18] 2026-03-03 09:25:42,507 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 10:41:18] 2026-03-03 09:26:07,870 | INFO     | PID=1096722 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 10:41:18] 2026-03-03 09:26:07,871 | INFO     | .. there are 12 such processes running
[2026-03-03 10:41:18] 2026-03-03 09:26:07,871 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 10:41:18] 2026-03-03 09:26:07,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 10:41:18] 2026-03-03 09:26:07,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 10:41:18] 2026-03-03 09:26:19,102 | INFO     | [monitor] cgroup control has ended
[2026-03-03 10:41:18] 2026-03-03 09:26:19,356 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22730209449792)>', '<ExcThread(monitor, started 22729902249728)>']
[2026-03-03 10:41:18] 2026-03-03 09:26:19,930 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 10:41:18] 2026-03-03 09:26:19,931 | INFO     | [monitor] control thread has ended
[2026-03-03 10:41:18] 2026-03-03 09:26:24,381 | INFO     | all workflow threads have been joined
[2026-03-03 10:41:18] 2026-03-03 09:26:24,382 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 10:41:18] 2026-03-03 09:26:24,382 | INFO     | traces error code: 0
[2026-03-03 10:41:18] 2026-03-03 09:26:24,382 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 10:41:18] 2026-03-03 09:26:24,609 [wrapper] ==== pilot stdout END ====
[2026-03-03 10:41:18] 2026-03-03 09:26:24,629 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 10:41:18] 2026-03-03 09:26:24,654 [wrapper] pilotpid: 1096722
[2026-03-03 10:41:18] 2026-03-03 09:26:24,672 [wrapper] Pilot exit status: 0
[2026-03-03 10:41:18] 2026-03-03 09:26:24,707 [wrapper] pandaids: 7035840862 7035840862
[2026-03-03 10:41:18] 2026-03-03 09:26:24,818 [wrapper] cleanup supervisor_pilot 1394292 1096723
[2026-03-03 10:41:18] 2026-03-03 09:26:24,821 [wrapper] Test setup, not cleaning
[2026-03-03 10:41:18] 2026-03-03 09:26:24,824 [wrapper] apfmon messages muted
[2026-03-03 10:41:18] 2026-03-03 09:26:24,827 [wrapper] ==== wrapper stdout END ====
[2026-03-03 10:41:18] 2026-03-03 09:26:24,836 [wrapper] ==== wrapper stderr END ====
[2026-03-03 10:41:18]  *** Error codes and diagnostics ***
[2026-03-03 10:41:18]     "exeErrorCode": 0,
[2026-03-03 10:41:18]     "exeErrorDiag": "",
[2026-03-03 10:41:18]     "pilotErrorCode": 0,
[2026-03-03 10:41:18]     "pilotErrorDiag": "",
[2026-03-03 10:41:18]  *** Listing of results directory ***
[2026-03-03 10:41:18] total 734400
[2026-03-03 10:41:18] drwx------ 5 boinc boinc      4096 Feb  2 16:00 pilot3
[2026-03-03 10:41:18] -rw-r--r-- 1 boinc boinc    584627 Mar  2 05:46 pilot3.tar.gz
[2026-03-03 10:41:18] -rwx------ 1 boinc boinc     36322 Mar  2 05:48 runpilot2-wrapper.sh
[2026-03-03 10:41:18] -rw-r--r-- 1 boinc boinc      5111 Mar  2 05:49 queuedata.json
[2026-03-03 10:41:18] -rw-r--r-- 1 boinc boinc       100 Mar  2 22:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 10:41:18] -rwxr-xr-x 1 boinc boinc      7986 Mar  2 22:48 run_atlas
[2026-03-03 10:41:18] -rw-r--r-- 1 boinc boinc       105 Mar  2 22:48 job.xml
[2026-03-03 10:41:18] -rw-r--r-- 3 boinc boinc 256442751 Mar  2 22:48 EVNT.48452589._000002.pool.root.1
[2026-03-03 10:41:18] -rw-r--r-- 3 boinc boinc 256442751 Mar  2 22:48 ATLAS.root_0
[2026-03-03 10:41:18] -rw-r--r-- 2 boinc boinc     15845 Mar  2 22:48 start_atlas.sh
[2026-03-03 10:41:18] drwxrwx--x 2 boinc boinc      4096 Mar  2 22:48 shared
[2026-03-03 10:41:18] -rw-r--r-- 2 boinc boinc    597974 Mar  2 22:48 input.tar.gz
[2026-03-03 10:41:18] -rw-r--r-- 1 boinc boinc         0 Mar  2 22:48 boinc_lockfile
[2026-03-03 10:41:18] -rw-r--r-- 1 boinc boinc      6647 Mar  3 04:51 init_data.xml
[2026-03-03 10:41:18] -rw-r--r-- 1 boinc boinc      2647 Mar  3 04:51 pandaJob.out
[2026-03-03 10:41:18] -rw------- 1 boinc boinc    997730 Mar  3 04:51 agis_schedconf.cvmfs.json
[2026-03-03 10:41:18] -rw------- 1 boinc boinc       452 Mar  3 04:51 workernode_map.json
[2026-03-03 10:41:18] -rw------- 1 boinc boinc 228599686 Mar  3 10:24 HITS.48844130._000037.pool.root.1
[2026-03-03 10:41:18] -rw-r--r-- 1 boinc boinc       531 Mar  3 10:24 boinc_task_state.xml
[2026-03-03 10:41:18] -rw------- 1 boinc boinc        97 Mar  3 10:25 pilot_heartbeat.json
[2026-03-03 10:41:18] -rw------- 1 boinc boinc      1033 Mar  3 10:25 memory_monitor_summary.json
[2026-03-03 10:41:18] -rw------- 1 boinc boinc   1512931 Mar  3 10:25 agis_ddmendpoints.agis.ALL.json
[2026-03-03 10:41:18] -rw------- 1 boinc boinc    486026 Mar  3 10:25 log.48844130._000037.job.log.tgz.1
[2026-03-03 10:41:18] -rw------- 1 boinc boinc      6394 Mar  3 10:25 heartbeat.json
[2026-03-03 10:41:18] -rw------- 1 boinc boinc      6037 Mar  3 10:26 pilotlog.txt
[2026-03-03 10:41:18] -rw------- 1 boinc boinc   2815536 Mar  3 10:26 log.48844130._000037.job.log.1
[2026-03-03 10:41:18] -rw------- 1 boinc boinc       357 Mar  3 10:26 output.list
[2026-03-03 10:41:18] -rw-r--r-- 1 boinc boinc       620 Mar  3 10:26 runtime_log
[2026-03-03 10:41:18] -rw------- 1 boinc boinc   3317760 Mar  3 10:26 result.tar.gz
[2026-03-03 10:41:18] -rw-r--r-- 1 boinc boinc      9282 Mar  3 10:26 runtime_log.err
[2026-03-03 10:41:18] -rw------- 1 boinc boinc       790 Mar  3 10:26 83TMDmXNAH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmFdALDmppMPzn.diag
[2026-03-03 10:41:18] -rw-r--r-- 1 boinc boinc        29 Mar  3 10:41 wrapper_checkpoint.txt
[2026-03-03 10:41:18] -rw-r--r-- 1 boinc boinc      8192 Mar  3 10:41 boinc_mmap_file
[2026-03-03 10:41:18] -rw-r--r-- 1 boinc boinc     23142 Mar  3 10:41 stderr.txt
[2026-03-03 10:41:18] HITS file was successfully produced:
[2026-03-03 10:41:18] -rw------- 1 boinc boinc 228599686 Mar  3 10:24 shared/HITS.pool.root.1
[2026-03-03 10:41:18]  *** Contents of shared directory: ***
[2026-03-03 10:41:18] total 477528
[2026-03-03 10:41:18] -rw-r--r-- 3 boinc boinc 256442751 Mar  2 22:48 ATLAS.root_0
[2026-03-03 10:41:18] -rw-r--r-- 2 boinc boinc     15845 Mar  2 22:48 start_atlas.sh
[2026-03-03 10:41:18] -rw-r--r-- 2 boinc boinc    597974 Mar  2 22:48 input.tar.gz
[2026-03-03 10:41:18] -rw------- 1 boinc boinc 228599686 Mar  3 10:24 HITS.pool.root.1
[2026-03-03 10:41:18] -rw------- 1 boinc boinc   3317760 Mar  3 10:26 result.tar.gz
10:41:20 (1092629): run_atlas exited; CPU time 77307.328121
10:41:20 (1092629): called boinc_finish(0)

</stderr_txt>
]]>

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