Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
06:44:06 (1287449): wrapper (7.7.26015): starting
06:44:06 (1287449): wrapper: running run_atlas (--nthreads 12)
[2026-03-02 06:44:06] Arguments: --nthreads 12
[2026-03-02 06:44:06] Threads: 12
[2026-03-02 06:44:06] Checking for CVMFS
[2026-03-02 06:44:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 06:44:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 06:44:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 06:44:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 06:44:07] 2.13.2.0 3497 1150 56580 156807 0 49 11633018 16777217 100 130560 0 1235501 99.994 32914 752 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2026-03-02 06:44:07] CVMFS is ok
[2026-03-02 06:44:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 06:44:07] Checking for apptainer binary...
[2026-03-02 06:44:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 06:44:07] Running /usr/bin/apptainer --version
[2026-03-02 06:44:07] apptainer version 1.3.0-bp160.1.36
[2026-03-02 06:44:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 06:44:07] boinc-runner
[2026-03-02 06:44:07] apptainer works
[2026-03-02 06:44:07] Set ATHENA_PROC_NUMBER=12
[2026-03-02 06:44:07] Set ATHENA_CORE_NUMBER=12
[2026-03-02 06:44:07] Starting ATLAS job with PandaID=7035725763
[2026-03-02 06:44:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 07:33:26]  *** The last 200 lines of the pilot log: ***
[2026-03-02 07:33:26]  filesize=374783
[2026-03-02 07:33:26]  filetype=log
[2026-03-02 07:33:26]  guid=ce83590f-8e3b-488f-acc5-822bc2f553fc
[2026-03-02 07:33:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-02 07:33:26]  is_altstaged=None
[2026-03-02 07:33:26]  is_tar=False
[2026-03-02 07:33:26]  lfn=log.48844207._000049.job.log.tgz.1
[2026-03-02 07:33:26]  mtime=0
[2026-03-02 07:33:26]  protocol_id=None
[2026-03-02 07:33:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-02 07:33:26]  replicas=None
[2026-03-02 07:33:26]  scope=mc23_13p6TeV
[2026-03-02 07:33:26]  status=None
[2026-03-02 07:33:26]  status_code=0
[2026-03-02 07:33:26]  storage_token=
[2026-03-02 07:33:26]  surl=/var/lib/boinc/slots/6/PanDA_Pilot-7035725763/log.48844207._000049.job.log.tgz.1
[2026-03-02 07:33:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/c0/log.48844207._000049.job.log.tgz.1
[2026-03-02 07:33:26]  workdir=None
[2026-03-02 07:33:26] ]
[2026-03-02 07:33:26] 2026-03-02 13:32:25,969 | INFO     | transferring file log.48844207._000049.job.log.tgz.1 from /var/lib/boinc/slots/6/PanDA_Pilot-7035725763/log.48844207._000049.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-03-02 07:33:26] 2026-03-02 13:32:25,969 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/6/PanDA_Pilot-7035725763/log.48844207._000049.job.log.tgz.1 /var/lib/boinc/slots/6/log.48844207._000049.job
[2026-03-02 07:33:26] 2026-03-02 13:32:25,978 | INFO     | adding to output.list: log.48844207._000049.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/c0/log.48844207._000049.job.log.tg
[2026-03-02 07:33:26] 2026-03-02 13:32:25,979 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-02 07:33:26] 2026-03-02 13:32:25,979 | INFO     | summary of transferred files:
[2026-03-02 07:33:26] 2026-03-02 13:32:25,979 | INFO     |  -- lfn=log.48844207._000049.job.log.tgz.1, status_code=0, status=transferred
[2026-03-02 07:33:26] 2026-03-02 13:32:25,979 | INFO     | stage-out finished correctly
[2026-03-02 07:33:26] 2026-03-02 13:32:26,027 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-02 07:33:26] 2026-03-02 13:32:26,622 | WARNING  | process 1296185 can no longer be monitored (due to stat problems) - aborting
[2026-03-02 07:33:26] 2026-03-02 13:32:26,623 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7035725763/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 07:33:26] 2026-03-02 13:32:26,676 | INFO     | number of running child processes to parent process 1296185: 1
[2026-03-02 07:33:26] 2026-03-02 13:32:26,676 | INFO     | maximum number of monitored processes: 6
[2026-03-02 07:33:26] 2026-03-02 13:32:26,738 | INFO     | job 7035725763 has state=finished
[2026-03-02 07:33:26] 2026-03-02 13:32:26,738 | INFO     | preparing for final server update for job 7035725763 in state='finished'
[2026-03-02 07:33:26] 2026-03-02 13:32:26,738 | INFO     | reading metadata from: /var/lib/boinc/slots/6/PanDA_Pilot-7035725763/jobReport.json
[2026-03-02 07:33:26] 2026-03-02 13:32:26,739 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/6/workernode_map.json
[2026-03-02 07:33:26] 2026-03-02 13:32:26,740 | INFO     | this job has now completed (state=finished)
[2026-03-02 07:33:26] 2026-03-02 13:32:26,740 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-02 07:33:26] 2026-03-02 13:32:26,740 | INFO     | log transfer has been attempted: DONE
[2026-03-02 07:33:26] 2026-03-02 13:32:26,740 | INFO     | job 7035725763 has finished - writing final server update
[2026-03-02 07:33:26] 2026-03-02 13:32:26,740 | INFO     | total number of processed events: 400 (read)
[2026-03-02 07:33:26] 2026-03-02 13:32:26,743 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7035725763/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 07:33:26] 2026-03-02 13:32:26,743 | INFO     | extracted standard info from prmon json
[2026-03-02 07:33:26] 2026-03-02 13:32:26,743 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 07:33:26] 2026-03-02 13:32:26,743 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 07:33:26] 2026-03-02 13:32:26,743 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 07:33:26] 2026-03-02 13:32:26,743 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 07:33:26] 2026-03-02 13:32:26,744 | INFO     | fitting pss+swap vs Time
[2026-03-02 07:33:26] 2026-03-02 13:32:26,744 | INFO     | sum of square deviations: 21358540.0
[2026-03-02 07:33:26] 2026-03-02 13:32:26,744 | INFO     | sum of deviations: -2235665616.0
[2026-03-02 07:33:26] 2026-03-02 13:32:26,744 | INFO     | mean x: 1772456997.0
[2026-03-02 07:33:26] 2026-03-02 13:32:26,744 | INFO     | mean y: 2848687.2682926827
[2026-03-02 07:33:26] 2026-03-02 13:32:26,744 | INFO     | intersect: 185531502051.75458
[2026-03-02 07:33:26] 2026-03-02 13:32:26,744 | INFO     | chi2: 0.008130514061119025
[2026-03-02 07:33:26] 2026-03-02 13:32:26,745 | INFO     | current memory leak: -104.67 B/s (using 41 data points, chi2=0.01)
[2026-03-02 07:33:26] 2026-03-02 13:32:26,745 | INFO     | could have reported an average CPU frequency of 4266 MHz (5 samples)
[2026-03-02 07:33:26] 2026-03-02 13:32:26,745 | INFO     | ..............................
[2026-03-02 07:33:26] 2026-03-02 13:32:26,745 | INFO     | . Timing measurements:
[2026-03-02 07:33:26] 2026-03-02 13:32:26,745 | INFO     | . get job = 0 s
[2026-03-02 07:33:26] 2026-03-02 13:32:26,745 | INFO     | . initial setup = 4 s
[2026-03-02 07:33:26] 2026-03-02 13:32:26,745 | INFO     | . payload setup = 2 s
[2026-03-02 07:33:26] 2026-03-02 13:32:26,745 | INFO     | . stage-in = 0 s
[2026-03-02 07:33:26] 2026-03-02 13:32:26,745 | INFO     | . payload execution = 2872 s
[2026-03-02 07:33:26] 2026-03-02 13:32:26,745 | INFO     | . stage-out = 0 s
[2026-03-02 07:33:26] 2026-03-02 13:32:26,745 | INFO     | . log creation = 0 s
[2026-03-02 07:33:26] 2026-03-02 13:32:26,745 | INFO     | ..............................
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | 
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | job summary report
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | --------------------------------------------------
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | PanDA job id: 7035725763
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | task id: 48844207
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | errors: (none)
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | pilot state: finished 
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | transexitcode: 0
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | exeerrorcode: 0
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | exeerrordiag: 
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | exitcode: 0
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | exitmsg: OK
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | cpuconsumptiontime: 32123 s
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | nevents: 400
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | neventsw: 0
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | pid: 1296185
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | pgrp: 1296185
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | corecount: 12
[2026-03-02 07:33:26] 2026-03-02 13:32:26,789 | INFO     | event service: False
[2026-03-02 07:33:26] 2026-03-02 13:32:26,790 | INFO     | sizes: {0: 2282097, 1: 2282359, 11: 2282387, 2878: 2307839, 2879: 2316893, 2880: 2317063}
[2026-03-02 07:33:26] 2026-03-02 13:32:26,790 | INFO     | --------------------------------------------------
[2026-03-02 07:33:26] 2026-03-02 13:32:26,790 | INFO     | 
[2026-03-02 07:33:26] 2026-03-02 13:32:26,790 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 07:33:26] 2026-03-02 13:32:26,804 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,805 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 07:33:26] 2026-03-02 13:32:26,805 | INFO     | job 7035725763 has completed (purged errors)
[2026-03-02 07:33:26] 2026-03-02 13:32:26,805 | INFO     | overall cleanup function is called
[2026-03-02 07:33:26] 2026-03-02 13:32:27,813 | INFO     | --- collectZombieJob: --- 10, [1296185]
[2026-03-02 07:33:26] 2026-03-02 13:32:27,813 | INFO     | zombie collector waiting for pid 1296185
[2026-03-02 07:33:26] 2026-03-02 13:32:27,813 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 07:33:26] 2026-03-02 13:32:27,813 | INFO     | collected zombie processes
[2026-03-02 07:33:26] 2026-03-02 13:32:27,813 | INFO     | will attempt to kill all subprocesses of pid=1296185
[2026-03-02 07:33:26] 2026-03-02 13:32:27,881 | INFO     | process IDs to be killed: [1296185] (in reverse order)
[2026-03-02 07:33:26] 2026-03-02 13:32:27,914 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 07:33:26] 2026-03-02 13:32:27,914 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 07:33:26] 2026-03-02 13:32:27,917 | INFO     | did not find any defunct processes belonging to 1296185
[2026-03-02 07:33:26] 2026-03-02 13:32:27,919 | INFO     | did not find any defunct processes belonging to 1296185
[2026-03-02 07:33:26] 2026-03-02 13:32:27,920 | INFO     | ready for new job
[2026-03-02 07:33:26] 2026-03-02 13:32:27,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 07:33:26] 2026-03-02 13:32:27,921 | INFO     | **************************************
[2026-03-02 07:33:26] 2026-03-02 13:32:27,921 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 07:33:26] 2026-03-02 13:32:27,921 | INFO     | **************************************
[2026-03-02 07:33:26] 2026-03-02 13:32:27,921 | INFO     | 
[2026-03-02 07:33:26] 2026-03-02 13:32:27,922 | INFO     | architecture information:
[2026-03-02 07:33:26] 2026-03-02 13:32:27,922 | INFO     | executing command: cat /etc/os-release
[2026-03-02 07:33:26] 2026-03-02 13:32:27,930 | INFO     | cat /etc/os-release:
[2026-03-02 07:33:26] NAME="CentOS Linux"
[2026-03-02 07:33:26] VERSION="7 (Core)"
[2026-03-02 07:33:26] ID="centos"
[2026-03-02 07:33:26] ID_LIKE="rhel fedora"
[2026-03-02 07:33:26] VERSION_ID="7"
[2026-03-02 07:33:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 07:33:26] ANSI_COLOR="0;31"
[2026-03-02 07:33:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 07:33:26] HOME_URL="https://www.centos.org/"
[2026-03-02 07:33:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 07:33:26] 
[2026-03-02 07:33:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 07:33:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 07:33:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 07:33:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 07:33:26] 
[2026-03-02 07:33:26] 2026-03-02 13:32:27,930 | INFO     | **************************************
[2026-03-02 07:33:26] 2026-03-02 13:32:28,433 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-03-02 07:33:26] 2026-03-02 13:32:28,443 | INFO     | sufficient remaining disk space (3868404482048 B)
[2026-03-02 07:33:26] 2026-03-02 13:32:28,443 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 07:33:26] 2026-03-02 13:32:28,443 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 07:33:26] 2026-03-02 13:32:28,443 | INFO     | update_server=False
[2026-03-02 07:33:26] 2026-03-02 13:32:28,443 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 07:33:26] 2026-03-02 13:32:28,443 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 07:33:26] 2026-03-02 13:32:28,443 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 07:33:26] 2026-03-02 13:32:28,443 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 07:33:26] 2026-03-02 13:32:28,444 | INFO     | aborting loop
[2026-03-02 07:33:26] 2026-03-02 13:32:28,628 | INFO     | all payload control threads have been joined
[2026-03-02 07:33:26] 2026-03-02 13:32:28,786 | INFO     | all data control threads have been joined
[2026-03-02 07:33:26] 2026-03-02 13:32:29,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 07:33:26] 2026-03-02 13:32:29,175 | INFO     | all job control threads have been joined
[2026-03-02 07:33:26] 2026-03-02 13:32:29,446 | INFO     | [job] queue monitor thread has finished
[2026-03-02 07:33:26] 2026-03-02 13:32:29,447 | INFO     | [job] retrieve thread has finished
[2026-03-02 07:33:26] 2026-03-02 13:32:29,449 | INFO     | [job] job monitor thread has finished
[2026-03-02 07:33:26] 2026-03-02 13:32:29,556 | INFO     | [payload] failed_post thread has finished
[2026-03-02 07:33:26] 2026-03-02 13:32:29,633 | INFO     | [payload] control thread has finished
[2026-03-02 07:33:26] 2026-03-02 13:32:29,759 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 07:33:26] 2026-03-02 13:32:29,791 | INFO     | [data] control thread has finished
[2026-03-02 07:33:26] 2026-03-02 13:32:29,808 | INFO     | [payload] validate_post thread has finished
[2026-03-02 07:33:26] 2026-03-02 13:32:29,855 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 07:33:26] 2026-03-02 13:32:29,881 | INFO     | [job] validate thread has finished
[2026-03-02 07:33:26] 2026-03-02 13:32:29,923 | INFO     | [data] copytool_in thread has finished
[2026-03-02 07:33:26] 2026-03-02 13:32:29,976 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 07:33:26] 2026-03-02 13:32:30,181 | INFO     | [job] control thread has finished
[2026-03-02 07:33:26] 2026-03-02 13:32:30,678 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 07:33:26] 2026-03-02 13:32:31,037 | INFO     | [data] copytool_out thread has finished
[2026-03-02 07:33:26] 2026-03-02 13:32:32,448 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 07:33:26] 2026-03-02 13:32:58,369 | INFO     | PID=1291396 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 07:33:26] 2026-03-02 13:32:58,369 | INFO     | .. there are 2 such processes running
[2026-03-02 07:33:26] 2026-03-02 13:32:58,370 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 07:33:26] 2026-03-02 13:32:58,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 07:33:26] 2026-03-02 13:32:58,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 07:33:26] 2026-03-02 13:33:20,838 | INFO     | [monitor] cgroup control has ended
[2026-03-02 07:33:26] 2026-03-02 13:33:21,046 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139768443930432)>', '<ExcThread(monitor, started 139767958202112)>']
[2026-03-02 07:33:26] 2026-03-02 13:33:21,482 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 07:33:26] 2026-03-02 13:33:21,483 | INFO     | [monitor] control thread has ended
[2026-03-02 07:33:26] 2026-03-02 13:33:26,071 | INFO     | all workflow threads have been joined
[2026-03-02 07:33:26] 2026-03-02 13:33:26,072 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 07:33:26] 2026-03-02 13:33:26,072 | INFO     | traces error code: 0
[2026-03-02 07:33:26] 2026-03-02 13:33:26,072 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 07:33:26] 2026-03-02 13:33:26,130 [wrapper] ==== pilot stdout END ====
[2026-03-02 07:33:26] 2026-03-02 13:33:26,131 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 07:33:26] 2026-03-02 13:33:26,133 [wrapper] pilotpid: 1291396
[2026-03-02 07:33:26] 2026-03-02 13:33:26,135 [wrapper] Pilot exit status: 0
[2026-03-02 07:33:26] 2026-03-02 13:33:26,140 [wrapper] pandaids: 7035725763
[2026-03-02 07:33:26] 2026-03-02 13:33:26,163 [wrapper] cleanup supervisor_pilot 1346807 1291397
[2026-03-02 07:33:26] 2026-03-02 13:33:26,164 [wrapper] Test setup, not cleaning
[2026-03-02 07:33:26] 2026-03-02 13:33:26,166 [wrapper] apfmon messages muted
[2026-03-02 07:33:26] 2026-03-02 13:33:26,167 [wrapper] ==== wrapper stdout END ====
[2026-03-02 07:33:26] 2026-03-02 13:33:26,168 [wrapper] ==== wrapper stderr END ====
[2026-03-02 07:33:26]  *** Error codes and diagnostics ***
[2026-03-02 07:33:26]     "exeErrorCode": 0,
[2026-03-02 07:33:26]     "exeErrorDiag": "",
[2026-03-02 07:33:26]     "pilotErrorCode": 0,
[2026-03-02 07:33:26]     "pilotErrorDiag": "",
[2026-03-02 07:33:26]  *** Listing of results directory ***
[2026-03-02 07:33:26] total 440364
[2026-03-02 07:33:26] -rw-r--r--. 1 boinc boinc    584627 Mar  1 18:56 pilot3.tar.gz
[2026-03-02 07:33:26] -rw-r--r--. 1 boinc boinc      5111 Mar  1 18:57 queuedata.json
[2026-03-02 07:33:26] -rwx------. 1 boinc boinc     36322 Mar  1 18:58 runpilot2-wrapper.sh
[2026-03-02 07:33:26] -rw-r--r--. 1 boinc boinc       100 Mar  2 06:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 07:33:26] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 06:44 run_atlas
[2026-03-02 07:33:26] -rw-r--r--. 1 boinc boinc       105 Mar  2 06:44 job.xml
[2026-03-02 07:33:26] -rw-r--r--. 2 boinc boinc     15845 Mar  2 06:44 start_atlas.sh
[2026-03-02 07:33:26] drwxrwx--x. 1 boinc boinc        76 Mar  2 06:44 shared
[2026-03-02 07:33:26] -rw-r--r--. 2 boinc boinc    597970 Mar  2 06:44 input.tar.gz
[2026-03-02 07:33:26] -rw-r--r--. 1 boinc boinc     10052 Mar  2 06:44 init_data.xml
[2026-03-02 07:33:26] -rw-r--r--. 2 boinc boinc 240520364 Mar  2 06:44 EVNT.48452751._000002.pool.root.1
[2026-03-02 07:33:26] -rw-r--r--. 1 boinc boinc         0 Mar  2 06:44 boinc_setup_complete
[2026-03-02 07:33:26] -rw-r--r--. 1 boinc boinc         0 Mar  2 06:44 boinc_lockfile
[2026-03-02 07:33:26] -rw-r--r--. 1 boinc boinc      2627 Mar  2 06:44 pandaJob.out
[2026-03-02 07:33:26] -rw-------. 1 boinc boinc        63 Mar  2 06:44 setup.sh.local
[2026-03-02 07:33:26] -rw-------. 1 boinc boinc    998151 Mar  2 06:44 agis_schedconf.cvmfs.json
[2026-03-02 07:33:26] -rw-------. 1 boinc boinc   1513015 Mar  2 06:44 agis_ddmendpoints.agis.ALL.json
[2026-03-02 07:33:26] -rw-------. 1 boinc boinc       431 Mar  2 06:44 workernode_map.json
[2026-03-02 07:33:26] drwx------. 1 boinc boinc       414 Mar  2 06:44 pilot3
[2026-03-02 07:33:26] -rw-------. 1 boinc boinc 204829081 Mar  2 07:32 HITS.48844207._000049.pool.root.1
[2026-03-02 07:33:26] -rw-r--r--. 1 boinc boinc       529 Mar  2 07:32 boinc_task_state.xml
[2026-03-02 07:33:26] -rw-------. 1 boinc boinc      1025 Mar  2 07:32 memory_monitor_summary.json
[2026-03-02 07:33:26] -rw-------. 1 boinc boinc    374783 Mar  2 07:32 log.48844207._000049.job.log.tgz.1
[2026-03-02 07:33:26] -rw-------. 1 boinc boinc      6334 Mar  2 07:32 heartbeat.json
[2026-03-02 07:33:26] -rw-------. 1 boinc boinc        95 Mar  2 07:32 pilot_heartbeat.json
[2026-03-02 07:33:26] -rw-r--r--. 1 boinc boinc      8192 Mar  2 07:33 boinc_mmap_file
[2026-03-02 07:33:26] -rw-r--r--. 1 boinc boinc        27 Mar  2 07:33 wrapper_checkpoint.txt
[2026-03-02 07:33:26] -rw-------. 1 boinc boinc      4821 Mar  2 07:33 pilotlog.txt
[2026-03-02 07:33:26] -rw-------. 1 boinc boinc    454749 Mar  2 07:33 log.48844207._000049.job.log.1
[2026-03-02 07:33:26] -rw-------. 1 boinc boinc       357 Mar  2 07:33 output.list
[2026-03-02 07:33:26] -rw-r--r--. 1 boinc boinc       620 Mar  2 07:33 runtime_log
[2026-03-02 07:33:26] -rw-------. 1 boinc boinc    849920 Mar  2 07:33 result.tar.gz
[2026-03-02 07:33:26] -rw-r--r--. 1 boinc boinc      9395 Mar  2 07:33 runtime_log.err
[2026-03-02 07:33:26] -rw-------. 1 boinc boinc       652 Mar  2 07:33 qo8MDmzm6G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmJ7BLDmIQNDNm.diag
[2026-03-02 07:33:26] -rw-r--r--. 1 boinc boinc     20925 Mar  2 07:33 stderr.txt
[2026-03-02 07:33:26] HITS file was successfully produced:
[2026-03-02 07:33:26] -rw-------. 1 boinc boinc 204829081 Mar  2 07:32 shared/HITS.pool.root.1
[2026-03-02 07:33:26]  *** Contents of shared directory: ***
[2026-03-02 07:33:26] total 436348
[2026-03-02 07:33:26] -rw-r--r--. 2 boinc boinc     15845 Mar  2 06:44 start_atlas.sh
[2026-03-02 07:33:26] -rw-r--r--. 2 boinc boinc    597970 Mar  2 06:44 input.tar.gz
[2026-03-02 07:33:26] -rw-r--r--. 2 boinc boinc 240520364 Mar  2 06:44 ATLAS.root_0
[2026-03-02 07:33:26] -rw-------. 1 boinc boinc 204829081 Mar  2 07:32 HITS.pool.root.1
[2026-03-02 07:33:26] -rw-------. 1 boinc boinc    849920 Mar  2 07:33 result.tar.gz
07:33:27 (1287449): run_atlas exited; CPU time 32139.304375
07:33:27 (1287449): called boinc_finish(0)

</stderr_txt>
]]>

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