Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:33:34 (1206822): wrapper (7.7.26015): starting
09:33:34 (1206822): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 09:33:34] Arguments: --nthreads 4
[2026-03-03 09:33:34] Threads: 4
[2026-03-03 09:33:34] Checking for CVMFS
[2026-03-03 09:33:34] No cvmfs_config command found, will try listing directly
[2026-03-03 09:33:34] CVMFS is ok
[2026-03-03 09:33:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 09:33:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 09:33:34] Further information can be found at the LHC@home message board.
[2026-03-03 09:33:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 09:33:34] Checking for apptainer binary...
[2026-03-03 09:33:34] which: no apptainer in ((null))
[2026-03-03 09:33:34] apptainer is not installed, using version from CVMFS
[2026-03-03 09:33:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 09:33:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-03-03 09:33:35] apptainer works
[2026-03-03 09:33:35] Set ATHENA_PROC_NUMBER=4
[2026-03-03 09:33:35] Set ATHENA_CORE_NUMBER=4
[2026-03-03 09:33:35] Starting ATLAS job with PandaID=7035799912
[2026-03-03 09:33:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 14:09:13]  *** The last 200 lines of the pilot log: ***
[2026-03-03 14:09:13] 2026-03-03 13:04:22,667 | INFO     | extracted standard info from prmon json
[2026-03-03 14:09:13] 2026-03-03 13:04:22,667 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 14:09:13] 2026-03-03 13:04:22,667 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 14:09:13] 2026-03-03 13:04:22,667 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 14:09:13] 2026-03-03 13:04:22,667 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 14:09:13] 2026-03-03 13:04:22,672 | INFO     | fitting pss+swap vs Time
[2026-03-03 14:09:13] 2026-03-03 13:04:22,673 | INFO     | sum of square deviations: 5836025702.5
[2026-03-03 14:09:13] 2026-03-03 13:04:22,675 | INFO     | sum of deviations: 34130070715.999992
[2026-03-03 14:09:13] 2026-03-03 13:04:22,675 | INFO     | mean x: 1772534936.5
[2026-03-03 14:09:13] 2026-03-03 13:04:22,675 | INFO     | mean y: 2357731.6090225563
[2026-03-03 14:09:13] 2026-03-03 13:04:22,675 | INFO     | intersect: -10363727994.060476
[2026-03-03 14:09:13] 2026-03-03 13:04:22,676 | INFO     | chi2: 1.35282647093635
[2026-03-03 14:09:13] 2026-03-03 13:04:22,676 | INFO     | sum of square deviations: 5513070810.0
[2026-03-03 14:09:13] 2026-03-03 13:04:22,678 | INFO     | sum of deviations: 33122102079.999996
[2026-03-03 14:09:13] 2026-03-03 13:04:22,678 | INFO     | mean x: 1772534784.0
[2026-03-03 14:09:13] 2026-03-03 13:04:22,678 | INFO     | mean y: 2357257.042145594
[2026-03-03 14:09:13] 2026-03-03 13:04:22,678 | INFO     | intersect: -10646894326.940094
[2026-03-03 14:09:13] 2026-03-03 13:04:22,679 | INFO     | chi2: 1.3532283738918014
[2026-03-03 14:09:13] 2026-03-03 13:04:22,679 | INFO     | current chi2=1.3532283738918014 (change=-0.029708389367427125 %)
[2026-03-03 14:09:13] 2026-03-03 13:04:22,679 | INFO     | right removable region: 260
[2026-03-03 14:09:13] 2026-03-03 13:04:22,680 | INFO     | sum of square deviations: 5513070810.0
[2026-03-03 14:09:13] 2026-03-03 13:04:22,681 | INFO     | sum of deviations: -1458566119.9999988
[2026-03-03 14:09:13] 2026-03-03 13:04:22,682 | INFO     | mean x: 1772535089.0
[2026-03-03 14:09:13] 2026-03-03 13:04:22,682 | INFO     | mean y: 2374382.4022988505
[2026-03-03 14:09:13] 2026-03-03 13:04:22,682 | INFO     | intersect: 471325302.21219385
[2026-03-03 14:09:13] 2026-03-03 13:04:22,682 | INFO     | chi2: 0.02255785809915186
[2026-03-03 14:09:13] 2026-03-03 13:04:22,682 | INFO     | current chi2=0.02255785809915186 (change=98.33253868224958 %)
[2026-03-03 14:09:13] 2026-03-03 13:04:22,682 | INFO     | sum of square deviations: 5202255680.0
[2026-03-03 14:09:13] 2026-03-03 13:04:22,684 | INFO     | sum of deviations: -3268566629.5
[2026-03-03 14:09:13] 2026-03-03 13:04:22,684 | INFO     | mean x: 1772535241.5
[2026-03-03 14:09:13] 2026-03-03 13:04:22,684 | INFO     | mean y: 2375257.02734375
[2026-03-03 14:09:13] 2026-03-03 13:04:22,685 | INFO     | intersect: 1116055532.7302911
[2026-03-03 14:09:13] 2026-03-03 13:04:22,685 | INFO     | chi2: 0.016111995512548823
[2026-03-03 14:09:13] 2026-03-03 13:04:22,685 | INFO     | current chi2=0.016111995512548823 (change=28.57479889389583 %)
[2026-03-03 14:09:13] 2026-03-03 13:04:22,685 | INFO     | sum of square deviations: 4903347750.0
[2026-03-03 14:09:13] 2026-03-03 13:04:22,687 | INFO     | sum of deviations: -2268357467.9999995
[2026-03-03 14:09:13] 2026-03-03 13:04:22,687 | INFO     | mean x: 1772535394.0
[2026-03-03 14:09:13] 2026-03-03 13:04:22,687 | INFO     | mean y: 2374746.131474104
[2026-03-03 14:09:13] 2026-03-03 13:04:22,687 | INFO     | intersect: 822374489.8319329
[2026-03-03 14:09:13] 2026-03-03 13:04:22,688 | INFO     | chi2: 0.015687723883702247
[2026-03-03 14:09:13] 2026-03-03 13:04:22,688 | INFO     | current chi2=0.015687723883702247 (change=2.633265559912377 %)
[2026-03-03 14:09:13] 2026-03-03 13:04:22,688 | INFO     | left removable region: 30
[2026-03-03 14:09:13] 2026-03-03 13:04:22,688 | INFO     | sum of square deviations: 3772712597.5
[2026-03-03 14:09:13] 2026-03-03 13:04:22,690 | INFO     | sum of deviations: 2366461388.9999995
[2026-03-03 14:09:13] 2026-03-03 13:04:22,690 | INFO     | mean x: 1772535668.5
[2026-03-03 14:09:13] 2026-03-03 13:04:22,690 | INFO     | mean y: 2371673.295652174
[2026-03-03 14:09:13] 2026-03-03 13:04:22,690 | INFO     | intersect: -1109464203.8687367
[2026-03-03 14:09:13] 2026-03-03 13:04:22,691 | INFO     | chi2: 0.00972046368944692
[2026-03-03 14:09:13] 2026-03-03 13:04:22,691 | INFO     | current memory leak: 0.63 B/s (using 230 data points, chi2=0.01)
[2026-03-03 14:09:13] 2026-03-03 13:04:22,692 | INFO     | could have reported an average CPU frequency of 2551 MHz (12 samples)
[2026-03-03 14:09:13] 2026-03-03 13:04:22,692 | INFO     | ..............................
[2026-03-03 14:09:13] 2026-03-03 13:04:22,692 | INFO     | . Timing measurements:
[2026-03-03 14:09:13] 2026-03-03 13:04:22,692 | INFO     | . get job = 0 s
[2026-03-03 14:09:13] 2026-03-03 13:04:22,692 | INFO     | . initial setup = 5 s
[2026-03-03 14:09:13] 2026-03-03 13:04:22,692 | INFO     | . payload setup = 6 s
[2026-03-03 14:09:13] 2026-03-03 13:04:22,692 | INFO     | . stage-in = 0 s
[2026-03-03 14:09:13] 2026-03-03 13:04:22,693 | INFO     | . payload execution = 16207 s
[2026-03-03 14:09:13] 2026-03-03 13:04:22,693 | INFO     | . stage-out = 1 s
[2026-03-03 14:09:13] 2026-03-03 13:04:22,693 | INFO     | . log creation = 0 s
[2026-03-03 14:09:13] 2026-03-03 13:04:22,693 | INFO     | ..............................
[2026-03-03 14:09:13] 2026-03-03 13:04:22,784 | INFO     | 
[2026-03-03 14:09:13] 2026-03-03 13:04:22,784 | INFO     | job summary report
[2026-03-03 14:09:13] 2026-03-03 13:04:22,784 | INFO     | --------------------------------------------------
[2026-03-03 14:09:13] 2026-03-03 13:04:22,784 | INFO     | PanDA job id: 7035799912
[2026-03-03 14:09:13] 2026-03-03 13:04:22,785 | INFO     | task id: 48841995
[2026-03-03 14:09:13] 2026-03-03 13:04:22,785 | INFO     | errors: (none)
[2026-03-03 14:09:13] 2026-03-03 13:04:22,785 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 14:09:13] 2026-03-03 13:04:22,785 | INFO     | pilot state: finished 
[2026-03-03 14:09:13] 2026-03-03 13:04:22,785 | INFO     | transexitcode: 0
[2026-03-03 14:09:13] 2026-03-03 13:04:22,785 | INFO     | exeerrorcode: 0
[2026-03-03 14:09:13] 2026-03-03 13:04:22,785 | INFO     | exeerrordiag: 
[2026-03-03 14:09:13] 2026-03-03 13:04:22,785 | INFO     | exitcode: 0
[2026-03-03 14:09:13] 2026-03-03 13:04:22,785 | INFO     | exitmsg: OK
[2026-03-03 14:09:13] 2026-03-03 13:04:22,785 | INFO     | cpuconsumptiontime: 60963 s
[2026-03-03 14:09:13] 2026-03-03 13:04:22,785 | INFO     | nevents: 400
[2026-03-03 14:09:13] 2026-03-03 13:04:22,786 | INFO     | neventsw: 0
[2026-03-03 14:09:13] 2026-03-03 13:04:22,786 | INFO     | pid: 1223984
[2026-03-03 14:09:13] 2026-03-03 13:04:22,786 | INFO     | pgrp: 1223984
[2026-03-03 14:09:13] 2026-03-03 13:04:22,786 | INFO     | corecount: 4
[2026-03-03 14:09:13] 2026-03-03 13:04:22,786 | INFO     | event service: False
[2026-03-03 14:09:13] 2026-03-03 13:04:22,786 | INFO     | sizes: {0: 2282184, 11: 2282184, 16216: 2314183, 16219: 2328058, 16220: 2328196}
[2026-03-03 14:09:13] 2026-03-03 13:04:22,786 | INFO     | --------------------------------------------------
[2026-03-03 14:09:13] 2026-03-03 13:04:22,786 | INFO     | 
[2026-03-03 14:09:13] 2026-03-03 13:04:22,786 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2026-03-03 14:09:13] 2026-03-03 13:04:22,808 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,808 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,808 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,808 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,808 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,808 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,808 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,809 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,809 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,809 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,809 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,809 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,809 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,809 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 14:09:13] 2026-03-03 13:04:22,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,810 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 14:09:13] 2026-03-03 13:04:22,810 | INFO     | job 7035799912 has completed (purged errors)
[2026-03-03 14:09:13] 2026-03-03 13:04:22,810 | INFO     | overall cleanup function is called
[2026-03-03 14:09:13] 2026-03-03 13:04:22,917 | WARNING  | process 1223984 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 14:09:13] 2026-03-03 13:04:23,184 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 14:09:13] 2026-03-03 13:04:23,544 | INFO     | number of running child processes to parent process 1223984: 1
[2026-03-03 14:09:13] 2026-03-03 13:04:23,544 | INFO     | maximum number of monitored processes: 6
[2026-03-03 14:09:13] 2026-03-03 13:04:23,544 | INFO     | aborting job monitoring since job object (job id=7035799912) has expired
[2026-03-03 14:09:13] 2026-03-03 13:04:23,815 | INFO     | --- collectZombieJob: --- 10, [1223984]
[2026-03-03 14:09:13] 2026-03-03 13:04:23,815 | INFO     | zombie collector waiting for pid 1223984
[2026-03-03 14:09:13] 2026-03-03 13:04:23,815 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 14:09:13] 2026-03-03 13:04:23,815 | INFO     | collected zombie processes
[2026-03-03 14:09:13] 2026-03-03 13:04:23,816 | INFO     | will attempt to kill all subprocesses of pid=1223984
[2026-03-03 14:09:13] 2026-03-03 13:04:24,163 | INFO     | process IDs to be killed: [1223984] (in reverse order)
[2026-03-03 14:09:13] 2026-03-03 13:04:24,284 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 14:09:13] 2026-03-03 13:04:24,285 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 14:09:13] 2026-03-03 13:04:24,296 | INFO     | did not find any defunct processes belonging to 1223984
[2026-03-03 14:09:13] 2026-03-03 13:04:24,307 | INFO     | did not find any defunct processes belonging to 1223984
[2026-03-03 14:09:13] 2026-03-03 13:04:24,307 | INFO     | ready for new job
[2026-03-03 14:09:13] 2026-03-03 13:04:24,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 14:09:13] 2026-03-03 13:04:24,310 | INFO     | **************************************
[2026-03-03 14:09:13] 2026-03-03 13:04:24,310 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 14:09:13] 2026-03-03 13:04:24,310 | INFO     | **************************************
[2026-03-03 14:09:13] 2026-03-03 13:04:24,310 | INFO     | 
[2026-03-03 14:09:13] 2026-03-03 13:04:24,314 | INFO     | architecture information:
[2026-03-03 14:09:13] 2026-03-03 13:04:24,315 | INFO     | executing command: cat /etc/os-release
[2026-03-03 14:09:13] 2026-03-03 13:04:24,332 | INFO     | cat /etc/os-release:
[2026-03-03 14:09:13] NAME="CentOS Linux"
[2026-03-03 14:09:13] VERSION="7 (Core)"
[2026-03-03 14:09:13] ID="centos"
[2026-03-03 14:09:13] ID_LIKE="rhel fedora"
[2026-03-03 14:09:13] VERSION_ID="7"
[2026-03-03 14:09:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 14:09:13] ANSI_COLOR="0;31"
[2026-03-03 14:09:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 14:09:13] HOME_URL="https://www.centos.org/"
[2026-03-03 14:09:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 14:09:13] 
[2026-03-03 14:09:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 14:09:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 14:09:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 14:09:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 14:09:13] 
[2026-03-03 14:09:13] 2026-03-03 13:04:24,332 | INFO     | **************************************
[2026-03-03 14:09:13] 2026-03-03 13:04:24,835 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2026-03-03 14:09:13] 2026-03-03 13:04:24,853 | INFO     | sufficient remaining disk space (667671330816 B)
[2026-03-03 14:09:13] 2026-03-03 13:04:24,853 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 14:09:13] 2026-03-03 13:04:24,853 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 14:09:13] 2026-03-03 13:04:24,853 | INFO     | update_server=False
[2026-03-03 14:09:13] 2026-03-03 13:04:24,853 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 14:09:13] 2026-03-03 13:04:24,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 14:09:13] 2026-03-03 13:04:24,854 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 14:09:13] 2026-03-03 13:04:24,854 | INFO     | aborting loop
[2026-03-03 14:09:13] 2026-03-03 13:04:24,994 | INFO     | all job control threads have been joined
[2026-03-03 14:09:13] 2026-03-03 13:04:25,008 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 14:09:13] 2026-03-03 13:04:25,039 | INFO     | all payload control threads have been joined
[2026-03-03 14:09:13] 2026-03-03 13:04:25,226 | INFO     | all data control threads have been joined
[2026-03-03 14:09:13] 2026-03-03 13:04:25,855 | INFO     | [job] retrieve thread has finished
[2026-03-03 14:09:13] 2026-03-03 13:04:25,858 | INFO     | [job] job monitor thread has finished
[2026-03-03 14:09:13] 2026-03-03 13:04:25,999 | INFO     | [job] control thread has finished
[2026-03-03 14:09:13] 2026-03-03 13:04:26,043 | INFO     | [payload] control thread has finished
[2026-03-03 14:09:13] 2026-03-03 13:04:26,065 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 14:09:13] 2026-03-03 13:04:26,112 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 14:09:13] 2026-03-03 13:04:26,155 | INFO     | [job] validate thread has finished
[2026-03-03 14:09:13] 2026-03-03 13:04:26,232 | INFO     | [data] control thread has finished
[2026-03-03 14:09:13] 2026-03-03 13:04:26,509 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 14:09:13] 2026-03-03 13:04:26,631 | INFO     | [data] copytool_in thread has finished
[2026-03-03 14:09:13] 2026-03-03 13:04:26,925 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 14:09:13] 2026-03-03 13:04:27,014 | INFO     | [data] copytool_out thread has finished
[2026-03-03 14:09:13] 2026-03-03 13:04:27,057 | INFO     | [payload] validate_post thread has finished
[2026-03-03 14:09:13] 2026-03-03 13:04:27,076 | INFO     | [payload] failed_post thread has finished
[2026-03-03 14:09:13] 2026-03-03 13:04:27,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 14:09:13] 2026-03-03 13:04:28,800 | INFO     | [job] queue monitor thread has finished
[2026-03-03 14:09:13] 2026-03-03 13:04:28,860 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 14:09:13] 2026-03-03 13:04:55,965 | INFO     | PID=1214497 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 14:09:13] 2026-03-03 13:04:55,966 | INFO     | .. there are 12 such processes running
[2026-03-03 14:09:13] 2026-03-03 13:04:55,966 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 14:09:13] 2026-03-03 13:04:55,967 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 14:09:13] 2026-03-03 13:04:55,967 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 14:09:13] 2026-03-03 13:05:18,474 | INFO     | [monitor] cgroup control has ended
[2026-03-03 14:09:13] 2026-03-03 13:05:18,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22415765546816)>', '<ExcThread(monitor, started 22415521613568)>']
[2026-03-03 14:09:13] 2026-03-03 13:05:19,081 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 14:09:13] 2026-03-03 13:05:19,081 | INFO     | [monitor] control thread has ended
[2026-03-03 14:09:13] 2026-03-03 13:05:23,886 | INFO     | all workflow threads have been joined
[2026-03-03 14:09:13] 2026-03-03 13:05:23,886 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 14:09:13] 2026-03-03 13:05:23,888 | INFO     | traces error code: 0
[2026-03-03 14:09:13] 2026-03-03 13:05:23,888 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 14:09:13] 2026-03-03 13:05:24,030 [wrapper] ==== pilot stdout END ====
[2026-03-03 14:09:13] 2026-03-03 13:05:24,033 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 14:09:13] 2026-03-03 13:05:24,035 [wrapper] pilotpid: 1214497
[2026-03-03 14:09:13] 2026-03-03 13:05:24,038 [wrapper] Pilot exit status: 0
[2026-03-03 14:09:13] 2026-03-03 13:05:24,048 [wrapper] pandaids: 7035799912
[2026-03-03 14:09:13] 2026-03-03 13:05:24,123 [wrapper] cleanup supervisor_pilot 1442465 1214498
[2026-03-03 14:09:13] 2026-03-03 13:05:24,126 [wrapper] Test setup, not cleaning
[2026-03-03 14:09:13] 2026-03-03 13:05:24,130 [wrapper] apfmon messages muted
[2026-03-03 14:09:13] 2026-03-03 13:05:24,133 [wrapper] ==== wrapper stdout END ====
[2026-03-03 14:09:13] 2026-03-03 13:05:24,136 [wrapper] ==== wrapper stderr END ====
[2026-03-03 14:09:13]  *** Error codes and diagnostics ***
[2026-03-03 14:09:13]     "exeErrorCode": 0,
[2026-03-03 14:09:13]     "exeErrorDiag": "",
[2026-03-03 14:09:13]     "pilotErrorCode": 0,
[2026-03-03 14:09:13]     "pilotErrorDiag": "",
[2026-03-03 14:09:13]  *** Listing of results directory ***
[2026-03-03 14:09:13] total 572592
[2026-03-03 14:09:13] -rw-r--r-- 1 boinc boinc    584627 Mar  2 03:17 pilot3.tar.gz
[2026-03-03 14:09:13] -rwx------ 1 boinc boinc     36322 Mar  2 03:30 runpilot2-wrapper.sh
[2026-03-03 14:09:13] -rw-r--r-- 1 boinc boinc      5111 Mar  2 03:31 queuedata.json
[2026-03-03 14:09:13] -rw-r--r-- 1 boinc boinc       100 Mar  3 09:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 14:09:13] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 09:33 run_atlas
[2026-03-03 14:09:13] -rw-r--r-- 1 boinc boinc       105 Mar  3 09:33 job.xml
[2026-03-03 14:09:13] -rw-r--r-- 1 boinc boinc      6640 Mar  3 09:33 init_data.xml
[2026-03-03 14:09:13] -rw-r--r-- 2 boinc boinc 313323178 Mar  3 09:33 EVNT.48252743._000065.pool.root.1
[2026-03-03 14:09:13] -rw-r--r-- 2 boinc boinc     15845 Mar  3 09:33 start_atlas.sh
[2026-03-03 14:09:13] drwxrwx--x 2 boinc boinc      4096 Mar  3 09:33 shared
[2026-03-03 14:09:13] -rw-r--r-- 2 boinc boinc    597947 Mar  3 09:33 input.tar.gz
[2026-03-03 14:09:13] -rw-r--r-- 1 boinc boinc         0 Mar  3 09:33 boinc_lockfile
[2026-03-03 14:09:13] -rw-r--r-- 1 boinc boinc      2492 Mar  3 09:33 pandaJob.out
[2026-03-03 14:09:13] -rw------- 1 boinc boinc    998420 Mar  3 09:33 agis_schedconf.cvmfs.json
[2026-03-03 14:09:13] -rw------- 1 boinc boinc       452 Mar  3 09:33 workernode_map.json
[2026-03-03 14:09:13] drwx------ 5 boinc boinc      4096 Mar  3 09:33 pilot3
[2026-03-03 14:09:13] -rw------- 1 boinc boinc 263646448 Mar  3 14:03 HITS.48841995._001658.pool.root.1
[2026-03-03 14:09:13] -rw-r--r-- 1 boinc boinc       529 Mar  3 14:03 boinc_task_state.xml
[2026-03-03 14:09:13] -rw------- 1 boinc boinc      1033 Mar  3 14:04 memory_monitor_summary.json
[2026-03-03 14:09:13] -rw------- 1 boinc boinc   1516104 Mar  3 14:04 agis_ddmendpoints.agis.ALL.json
[2026-03-03 14:09:13] -rw------- 1 boinc boinc    442127 Mar  3 14:04 log.48841995._001658.job.log.tgz.1
[2026-03-03 14:09:13] -rw------- 1 boinc boinc      6399 Mar  3 14:04 heartbeat.json
[2026-03-03 14:09:13] -rw------- 1 boinc boinc        95 Mar  3 14:04 pilot_heartbeat.json
[2026-03-03 14:09:13] -rw------- 1 boinc boinc      4830 Mar  3 14:05 pilotlog.txt
[2026-03-03 14:09:13] -rw------- 1 boinc boinc   2275801 Mar  3 14:05 log.48841995._001658.job.log.1
[2026-03-03 14:09:13] -rw------- 1 boinc boinc       357 Mar  3 14:05 output.list
[2026-03-03 14:09:13] -rw-r--r-- 1 boinc boinc       620 Mar  3 14:05 runtime_log
[2026-03-03 14:09:13] -rw------- 1 boinc boinc   2734080 Mar  3 14:05 result.tar.gz
[2026-03-03 14:09:13] -rw-r--r-- 1 boinc boinc      9205 Mar  3 14:05 runtime_log.err
[2026-03-03 14:09:13] -rw------- 1 boinc boinc       665 Mar  3 14:05 TZcMDmvD8G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm6SCLDmFJn6gn.diag
[2026-03-03 14:09:13] -rw-r--r-- 1 boinc boinc        26 Mar  3 14:08 wrapper_checkpoint.txt
[2026-03-03 14:09:13] -rw-r--r-- 1 boinc boinc      8192 Mar  3 14:09 boinc_mmap_file
[2026-03-03 14:09:13] -rw-r--r-- 1 boinc boinc     20858 Mar  3 14:09 stderr.txt
[2026-03-03 14:09:13] HITS file was successfully produced:
[2026-03-03 14:09:13] -rw------- 1 boinc boinc 263646448 Mar  3 14:03 shared/HITS.pool.root.1
[2026-03-03 14:09:13]  *** Contents of shared directory: ***
[2026-03-03 14:09:13] total 566728
[2026-03-03 14:09:13] -rw-r--r-- 2 boinc boinc 313323178 Mar  3 09:33 ATLAS.root_0
[2026-03-03 14:09:13] -rw-r--r-- 2 boinc boinc     15845 Mar  3 09:33 start_atlas.sh
[2026-03-03 14:09:13] -rw-r--r-- 2 boinc boinc    597947 Mar  3 09:33 input.tar.gz
[2026-03-03 14:09:13] -rw------- 1 boinc boinc 263646448 Mar  3 14:03 HITS.pool.root.1
[2026-03-03 14:09:13] -rw------- 1 boinc boinc   2734080 Mar  3 14:05 result.tar.gz
14:09:15 (1206822): run_atlas exited; CPU time 61607.171764
14:09:15 (1206822): called boinc_finish(0)

</stderr_txt>
]]>

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