Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:07:38 (2632621): wrapper (7.7.26015): starting
03:07:38 (2632621): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 03:07:38] Arguments: --nthreads 4
[2026-03-03 03:07:38] Threads: 4
[2026-03-03 03:07:38] Checking for CVMFS
[2026-03-03 03:07:38] No cvmfs_config command found, will try listing directly
[2026-03-03 03:07:38] CVMFS is ok
[2026-03-03 03:07:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 03:07:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 03:07:38] Further information can be found at the LHC@home message board.
[2026-03-03 03:07:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 03:07:38] Checking for apptainer binary...
[2026-03-03 03:07:38] which: no apptainer in ((null))
[2026-03-03 03:07:38] apptainer is not installed, using version from CVMFS
[2026-03-03 03:07:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 03:07:38] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot160/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-03 03:07:38] apptainer works
[2026-03-03 03:07:38] Set ATHENA_PROC_NUMBER=4
[2026-03-03 03:07:38] Set ATHENA_CORE_NUMBER=4
[2026-03-03 03:07:38] Starting ATLAS job with PandaID=7035800525
[2026-03-03 03:07:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot160/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 05:03:06]  *** The last 200 lines of the pilot log: ***
[2026-03-03 05:03:06] 2026-03-03 04:02:11,884 | INFO     | mean x: 1772507106.0
[2026-03-03 05:03:06] 2026-03-03 04:02:11,884 | INFO     | mean y: 2310931.8230088498
[2026-03-03 05:03:06] 2026-03-03 04:02:11,884 | INFO     | intersect: -22319129617.19846
[2026-03-03 05:03:06] 2026-03-03 04:02:11,884 | INFO     | chi2: 1.938606540754511
[2026-03-03 05:03:06] 2026-03-03 04:02:11,884 | INFO     | sum of square deviations: 390582207.0
[2026-03-03 05:03:06] 2026-03-03 04:02:11,884 | INFO     | sum of deviations: 12308206161.5
[2026-03-03 05:03:06] 2026-03-03 04:02:11,884 | INFO     | mean x: 1772506953.5
[2026-03-03 05:03:06] 2026-03-03 04:02:11,884 | INFO     | mean y: 2328156.8055555555
[2026-03-03 05:03:06] 2026-03-03 04:02:11,884 | INFO     | intersect: -55853726254.73167
[2026-03-03 05:03:06] 2026-03-03 04:02:11,884 | INFO     | chi2: 1.1180483133064574
[2026-03-03 05:03:06] 2026-03-03 04:02:11,884 | INFO     | current chi2=1.1180483133064574 (change=42.32721855610217 %)
[2026-03-03 05:03:06] 2026-03-03 04:02:11,884 | INFO     | sum of square deviations: 338804492.0
[2026-03-03 05:03:06] 2026-03-03 04:02:11,885 | INFO     | sum of deviations: 11627601254.0
[2026-03-03 05:03:06] 2026-03-03 04:02:11,885 | INFO     | mean x: 1772506801.0
[2026-03-03 05:03:06] 2026-03-03 04:02:11,885 | INFO     | mean y: 2326150.708737864
[2026-03-03 05:03:06] 2026-03-03 04:02:11,885 | INFO     | intersect: -60829223573.93638
[2026-03-03 05:03:06] 2026-03-03 04:02:11,885 | INFO     | chi2: 1.1196173629752866
[2026-03-03 05:03:06] 2026-03-03 04:02:11,885 | INFO     | current chi2=1.1196173629752866 (change=-0.14033827073080396 %)
[2026-03-03 05:03:06] 2026-03-03 04:02:11,885 | INFO     | right removable region: 102
[2026-03-03 05:03:06] 2026-03-03 04:02:11,885 | INFO     | sum of square deviations: 390582207.0
[2026-03-03 05:03:06] 2026-03-03 04:02:11,885 | INFO     | sum of deviations: -5370539308.0
[2026-03-03 05:03:06] 2026-03-03 04:02:11,885 | INFO     | mean x: 1772507258.5
[2026-03-03 05:03:06] 2026-03-03 04:02:11,885 | INFO     | mean y: 2339643.685185185
[2026-03-03 05:03:06] 2026-03-03 04:02:11,885 | INFO     | intersect: 24374468570.41217
[2026-03-03 05:03:06] 2026-03-03 04:02:11,885 | INFO     | chi2: 0.8517130478902948
[2026-03-03 05:03:06] 2026-03-03 04:02:11,886 | INFO     | current chi2=0.8517130478902948 (change=56.065708539350865 %)
[2026-03-03 05:03:06] 2026-03-03 04:02:11,886 | INFO     | sum of square deviations: 338804492.0
[2026-03-03 05:03:06] 2026-03-03 04:02:11,886 | INFO     | sum of deviations: -5616246088.0
[2026-03-03 05:03:06] 2026-03-03 04:02:11,886 | INFO     | mean x: 1772507411.0
[2026-03-03 05:03:06] 2026-03-03 04:02:11,886 | INFO     | mean y: 2340366.203883495
[2026-03-03 05:03:06] 2026-03-03 04:02:11,886 | INFO     | intersect: 29384588972.812553
[2026-03-03 05:03:06] 2026-03-03 04:02:11,886 | INFO     | chi2: 0.8522029770979955
[2026-03-03 05:03:06] 2026-03-03 04:02:11,886 | INFO     | current chi2=0.8522029770979955 (change=-0.05752280171288993 %)
[2026-03-03 05:03:06] 2026-03-03 04:02:11,886 | INFO     | left removable region: 20
[2026-03-03 05:03:06] 2026-03-03 04:02:11,886 | INFO     | sum of square deviations: 170944600.5
[2026-03-03 05:03:06] 2026-03-03 04:02:11,886 | INFO     | sum of deviations: 398208274.50000006
[2026-03-03 05:03:06] 2026-03-03 04:02:11,886 | INFO     | mean x: 1772507380.5
[2026-03-03 05:03:06] 2026-03-03 04:02:11,886 | INFO     | mean y: 2361984.4024390243
[2026-03-03 05:03:06] 2026-03-03 04:02:11,886 | INFO     | intersect: -4126619588.9431314
[2026-03-03 05:03:06] 2026-03-03 04:02:11,887 | INFO     | chi2: 0.00010036709486526095
[2026-03-03 05:03:06] 2026-03-03 04:02:11,887 | INFO     | current memory leak: 2.33 B/s (using 82 data points, chi2=0.00)
[2026-03-03 05:03:06] 2026-03-03 04:02:11,887 | INFO     | could have reported an average CPU frequency of 3623 MHz (7 samples)
[2026-03-03 05:03:06] 2026-03-03 04:02:11,887 | INFO     | ..............................
[2026-03-03 05:03:06] 2026-03-03 04:02:11,887 | INFO     | . Timing measurements:
[2026-03-03 05:03:06] 2026-03-03 04:02:11,887 | INFO     | . get job = 0 s
[2026-03-03 05:03:06] 2026-03-03 04:02:11,887 | INFO     | . initial setup = 4 s
[2026-03-03 05:03:06] 2026-03-03 04:02:11,887 | INFO     | . payload setup = 4 s
[2026-03-03 05:03:06] 2026-03-03 04:02:11,887 | INFO     | . stage-in = 0 s
[2026-03-03 05:03:06] 2026-03-03 04:02:11,887 | INFO     | . payload execution = 6838 s
[2026-03-03 05:03:06] 2026-03-03 04:02:11,887 | INFO     | . stage-out = 0 s
[2026-03-03 05:03:06] 2026-03-03 04:02:11,887 | INFO     | . log creation = 0 s
[2026-03-03 05:03:06] 2026-03-03 04:02:11,887 | INFO     | ..............................
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | 
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | job summary report
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | --------------------------------------------------
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | PanDA job id: 7035800525
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | task id: 48841995
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | errors: (none)
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | pilot state: finished 
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | transexitcode: 0
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | exeerrorcode: 0
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | exeerrordiag: 
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | exitcode: 0
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | exitmsg: OK
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | cpuconsumptiontime: 26487 s
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | nevents: 400
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | neventsw: 0
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | pid: 2642994
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | pgrp: 2642994
[2026-03-03 05:03:06] 2026-03-03 04:02:11,934 | INFO     | corecount: 4
[2026-03-03 05:03:06] 2026-03-03 04:02:11,935 | INFO     | event service: False
[2026-03-03 05:03:06] 2026-03-03 04:02:11,935 | INFO     | sizes: {0: 2282185, 11: 2282185, 6847: 2309359, 6848: 2318381, 6851: 2318631}
[2026-03-03 05:03:06] 2026-03-03 04:02:11,935 | INFO     | --------------------------------------------------
[2026-03-03 05:03:06] 2026-03-03 04:02:11,935 | INFO     | 
[2026-03-03 05:03:06] 2026-03-03 04:02:11,935 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot160/slots/0
[2026-03-03 05:03:06] 2026-03-03 04:02:11,952 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | job 7035800525 has completed (purged errors)
[2026-03-03 05:03:06] 2026-03-03 04:02:11,953 | INFO     | overall cleanup function is called
[2026-03-03 05:03:06] 2026-03-03 04:02:12,958 | INFO     | --- collectZombieJob: --- 10, [2642994]
[2026-03-03 05:03:06] 2026-03-03 04:02:12,958 | INFO     | zombie collector waiting for pid 2642994
[2026-03-03 05:03:06] 2026-03-03 04:02:12,958 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 05:03:06] 2026-03-03 04:02:12,958 | INFO     | collected zombie processes
[2026-03-03 05:03:06] 2026-03-03 04:02:12,958 | INFO     | will attempt to kill all subprocesses of pid=2642994
[2026-03-03 05:03:06] 2026-03-03 04:02:13,387 | INFO     | process IDs to be killed: [2642994] (in reverse order)
[2026-03-03 05:03:06] 2026-03-03 04:02:13,582 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 05:03:06] 2026-03-03 04:02:13,582 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 05:03:06] 2026-03-03 04:02:13,610 | INFO     | did not find any defunct processes belonging to 2642994
[2026-03-03 05:03:06] 2026-03-03 04:02:13,637 | INFO     | did not find any defunct processes belonging to 2642994
[2026-03-03 05:03:06] 2026-03-03 04:02:13,637 | INFO     | ready for new job
[2026-03-03 05:03:06] 2026-03-03 04:02:13,637 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 05:03:06] 2026-03-03 04:02:13,638 | INFO     | **************************************
[2026-03-03 05:03:06] 2026-03-03 04:02:13,638 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 05:03:06] 2026-03-03 04:02:13,638 | INFO     | **************************************
[2026-03-03 05:03:06] 2026-03-03 04:02:13,638 | INFO     | 
[2026-03-03 05:03:06] 2026-03-03 04:02:13,644 | INFO     | architecture information:
[2026-03-03 05:03:06] 2026-03-03 04:02:13,644 | INFO     | executing command: cat /etc/os-release
[2026-03-03 05:03:06] 2026-03-03 04:02:13,658 | INFO     | cat /etc/os-release:
[2026-03-03 05:03:06] NAME="CentOS Linux"
[2026-03-03 05:03:06] VERSION="7 (Core)"
[2026-03-03 05:03:06] ID="centos"
[2026-03-03 05:03:06] ID_LIKE="rhel fedora"
[2026-03-03 05:03:06] VERSION_ID="7"
[2026-03-03 05:03:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 05:03:06] ANSI_COLOR="0;31"
[2026-03-03 05:03:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 05:03:06] HOME_URL="https://www.centos.org/"
[2026-03-03 05:03:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 05:03:06] 
[2026-03-03 05:03:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 05:03:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 05:03:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 05:03:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 05:03:06] 
[2026-03-03 05:03:06] 2026-03-03 04:02:13,659 | INFO     | **************************************
[2026-03-03 05:03:06] 2026-03-03 04:02:14,160 | INFO     | executing command: df -mP /var/lib/boinc/var/slot160/slots/0
[2026-03-03 05:03:06] 2026-03-03 04:02:14,174 | INFO     | sufficient remaining disk space (21551382528 B)
[2026-03-03 05:03:06] 2026-03-03 04:02:14,174 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 05:03:06] 2026-03-03 04:02:14,174 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 05:03:06] 2026-03-03 04:02:14,175 | INFO     | update_server=False
[2026-03-03 05:03:06] 2026-03-03 04:02:14,175 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 05:03:06] 2026-03-03 04:02:14,175 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 05:03:06] 2026-03-03 04:02:14,211 | WARNING  | process 2642994 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 05:03:06] 2026-03-03 04:02:14,307 | INFO     | all data control threads have been joined
[2026-03-03 05:03:06] 2026-03-03 04:02:14,430 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 05:03:06] 2026-03-03 04:02:14,510 | INFO     | using path: /var/lib/boinc/var/slot160/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 05:03:06] 2026-03-03 04:02:14,510 | INFO     | using path: /var/lib/boinc/var/slot160/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 05:03:06] 2026-03-03 04:02:14,511 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-03 05:03:06] 2026-03-03 04:02:14,511 | WARNING  | maxPSS not found in memory monitor output
[2026-03-03 05:03:06] 2026-03-03 04:02:14,511 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot160/slots/0/PanDA_Pilot-7035800525/payload.stdout) since it has not been created yet
[2026-03-03 05:03:06] 2026-03-03 04:02:14,511 | INFO     | executing command: df -mP /var/lib/boinc/var/slot160/slots/0
[2026-03-03 05:03:06] 2026-03-03 04:02:14,524 | INFO     | sufficient remaining disk space (21551382528 B)
[2026-03-03 05:03:06] 2026-03-03 04:02:14,524 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-03 05:03:06] 2026-03-03 04:02:14,525 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot160/slots/0/PanDA_Pilot-7035800525/HITS.48841995._002039.pool.root.1 since it does not exist
[2026-03-03 05:03:06] 2026-03-03 04:02:14,954 | INFO     | number of running child processes to parent process 2642994: 1
[2026-03-03 05:03:06] 2026-03-03 04:02:14,954 | INFO     | maximum number of monitored processes: 6
[2026-03-03 05:03:06] 2026-03-03 04:02:14,954 | INFO     | aborting job monitoring since job object (job id=7035800525) has expired
[2026-03-03 05:03:06] 2026-03-03 04:02:14,954 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 05:03:06] 2026-03-03 04:02:14,954 | INFO     | will abort loop
[2026-03-03 05:03:06] 2026-03-03 04:02:15,180 | INFO     | [job] retrieve thread has finished
[2026-03-03 05:03:06] 2026-03-03 04:02:15,221 | INFO     | all job control threads have been joined
[2026-03-03 05:03:06] 2026-03-03 04:02:15,228 | INFO     | [payload] failed_post thread has finished
[2026-03-03 05:03:06] 2026-03-03 04:02:15,294 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 05:03:06] 2026-03-03 04:02:15,312 | INFO     | [data] control thread has finished
[2026-03-03 05:03:06] 2026-03-03 04:02:15,414 | INFO     | all payload control threads have been joined
[2026-03-03 05:03:06] 2026-03-03 04:02:15,618 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 05:03:06] 2026-03-03 04:02:15,770 | INFO     | [payload] validate_post thread has finished
[2026-03-03 05:03:06] 2026-03-03 04:02:15,959 | INFO     | [job] job monitor thread has finished
[2026-03-03 05:03:06] 2026-03-03 04:02:15,973 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 05:03:06] 2026-03-03 04:02:16,060 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 05:03:06] 2026-03-03 04:02:16,136 | INFO     | [job] validate thread has finished
[2026-03-03 05:03:06] 2026-03-03 04:02:16,214 | INFO     | [data] copytool_in thread has finished
[2026-03-03 05:03:06] 2026-03-03 04:02:16,224 | INFO     | [job] control thread has finished
[2026-03-03 05:03:06] 2026-03-03 04:02:16,415 | INFO     | [payload] control thread has finished
[2026-03-03 05:03:06] 2026-03-03 04:02:16,436 | INFO     | [data] copytool_out thread has finished
[2026-03-03 05:03:06] 2026-03-03 04:02:16,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 05:03:06] 2026-03-03 04:02:17,950 | INFO     | [job] queue monitor thread has finished
[2026-03-03 05:03:06] 2026-03-03 04:02:18,181 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 05:03:06] 2026-03-03 04:02:44,198 | INFO     | PID=2637160 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 05:03:06] 2026-03-03 04:02:44,198 | INFO     | .. there are 47 such processes running
[2026-03-03 05:03:06] 2026-03-03 04:02:44,199 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 05:03:06] 2026-03-03 04:02:44,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 05:03:06] 2026-03-03 04:02:44,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 05:03:06] 2026-03-03 04:03:00,851 | INFO     | [monitor] cgroup control has ended
[2026-03-03 05:03:06] 2026-03-03 04:03:00,899 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23215696840512)>', '<ExcThread(monitor, started 23215461385984)>']
[2026-03-03 05:03:06] 2026-03-03 04:03:01,273 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 05:03:06] 2026-03-03 04:03:01,273 | INFO     | [monitor] control thread has ended
[2026-03-03 05:03:06] 2026-03-03 04:03:05,924 | INFO     | all workflow threads have been joined
[2026-03-03 05:03:06] 2026-03-03 04:03:05,924 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 05:03:06] 2026-03-03 04:03:05,924 | INFO     | traces error code: 0
[2026-03-03 05:03:06] 2026-03-03 04:03:05,924 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 05:03:06] 2026-03-03 04:03:06,106 [wrapper] ==== pilot stdout END ====
[2026-03-03 05:03:06] 2026-03-03 04:03:06,108 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 05:03:06] 2026-03-03 04:03:06,110 [wrapper] pilotpid: 2637160
[2026-03-03 05:03:06] 2026-03-03 04:03:06,112 [wrapper] Pilot exit status: 0
[2026-03-03 05:03:06] 2026-03-03 04:03:06,121 [wrapper] pandaids: 7035800525
[2026-03-03 05:03:06] 2026-03-03 04:03:06,240 [wrapper] cleanup supervisor_pilot 3431931 2637161
[2026-03-03 05:03:06] 2026-03-03 04:03:06,242 [wrapper] Test setup, not cleaning
[2026-03-03 05:03:06] 2026-03-03 04:03:06,245 [wrapper] apfmon messages muted
[2026-03-03 05:03:06] 2026-03-03 04:03:06,247 [wrapper] ==== wrapper stdout END ====
[2026-03-03 05:03:06] 2026-03-03 04:03:06,249 [wrapper] ==== wrapper stderr END ====
[2026-03-03 05:03:06]  *** Error codes and diagnostics ***
[2026-03-03 05:03:06]     "exeErrorCode": 0,
[2026-03-03 05:03:06]     "exeErrorDiag": "",
[2026-03-03 05:03:06]     "pilotErrorCode": 0,
[2026-03-03 05:03:06]     "pilotErrorDiag": "",
[2026-03-03 05:03:06]  *** Listing of results directory ***
[2026-03-03 05:03:06] total 571164
[2026-03-03 05:03:06] -rw-r--r--. 1 boinc boinc    584627 Mar  2 03:17 pilot3.tar.gz
[2026-03-03 05:03:06] -rwx------. 1 boinc boinc     36322 Mar  2 03:30 runpilot2-wrapper.sh
[2026-03-03 05:03:06] -rw-r--r--. 1 boinc boinc      5111 Mar  2 03:31 queuedata.json
[2026-03-03 05:03:06] -rw-r--r--. 1 boinc boinc       100 Mar  3 03:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 05:03:06] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 03:07 run_atlas
[2026-03-03 05:03:06] -rw-r--r--. 1 boinc boinc       105 Mar  3 03:07 job.xml
[2026-03-03 05:03:06] -rw-r--r--. 2 boinc boinc    597947 Mar  3 03:07 input.tar.gz
[2026-03-03 05:03:06] -rw-r--r--. 1 boinc boinc      6705 Mar  3 03:07 init_data.xml
[2026-03-03 05:03:06] -rw-r--r--. 2 boinc boinc 313293012 Mar  3 03:07 EVNT.48252743._000081.pool.root.1
[2026-03-03 05:03:06] -rw-r--r--. 2 boinc boinc     15845 Mar  3 03:07 start_atlas.sh
[2026-03-03 05:03:06] drwxrwx--x. 2 boinc boinc      4096 Mar  3 03:07 shared
[2026-03-03 05:03:06] -rw-r--r--. 1 boinc boinc         0 Mar  3 03:07 boinc_lockfile
[2026-03-03 05:03:06] -rw-r--r--. 1 boinc boinc      2492 Mar  3 03:07 pandaJob.out
[2026-03-03 05:03:06] -rw-------. 1 boinc boinc    997722 Mar  3 03:07 agis_schedconf.cvmfs.json
[2026-03-03 05:03:06] -rw-------. 1 boinc boinc   1512931 Mar  3 03:07 agis_ddmendpoints.agis.ALL.json
[2026-03-03 05:03:06] -rw-------. 1 boinc boinc       445 Mar  3 03:07 workernode_map.json
[2026-03-03 05:03:06] drwx------. 5 boinc boinc      4096 Mar  3 03:07 pilot3
[2026-03-03 05:03:06] -rw-r--r--. 1 boinc boinc       529 Mar  3 05:01 boinc_task_state.xml
[2026-03-03 05:03:06] -rw-------. 1 boinc boinc 265100687 Mar  3 05:01 HITS.48841995._002039.pool.root.1
[2026-03-03 05:03:06] -rw-------. 1 boinc boinc      1031 Mar  3 05:02 memory_monitor_summary.json
[2026-03-03 05:03:06] -rw-------. 1 boinc boinc    288443 Mar  3 05:02 log.48841995._002039.job.log.tgz.1
[2026-03-03 05:03:06] -rw-------. 1 boinc boinc      6349 Mar  3 05:02 heartbeat.json
[2026-03-03 05:03:06] -rw-r--r--. 1 boinc boinc        27 Mar  3 05:02 wrapper_checkpoint.txt
[2026-03-03 05:03:06] -rw-------. 1 boinc boinc        95 Mar  3 05:02 pilot_heartbeat.json
[2026-03-03 05:03:06] -rw-------. 1 boinc boinc      6375 Mar  3 05:03 pilotlog.txt
[2026-03-03 05:03:06] -rw-------. 1 boinc boinc    989160 Mar  3 05:03 log.48841995._002039.job.log.1
[2026-03-03 05:03:06] -rw-------. 1 boinc boinc       357 Mar  3 05:03 output.list
[2026-03-03 05:03:06] -rw-r--r--. 1 boinc boinc       620 Mar  3 05:03 runtime_log
[2026-03-03 05:03:06] -rw-------. 1 boinc boinc   1290240 Mar  3 05:03 result.tar.gz
[2026-03-03 05:03:06] -rw-r--r--. 1 boinc boinc      8192 Mar  3 05:03 boinc_mmap_file
[2026-03-03 05:03:06] -rw-r--r--. 1 boinc boinc      9221 Mar  3 05:03 runtime_log.err
[2026-03-03 05:03:06] -rw-------. 1 boinc boinc       662 Mar  3 05:03 ZDqKDmwD8G9n9Rq4apOajLDm4fhM0noT9bVooX4SDmaWALDmT5zAan.diag
[2026-03-03 05:03:06] -rw-r--r--. 1 boinc boinc     21234 Mar  3 05:03 stderr.txt
[2026-03-03 05:03:06] HITS file was successfully produced:
[2026-03-03 05:03:06] -rw-------. 1 boinc boinc 265100687 Mar  3 05:01 shared/HITS.pool.root.1
[2026-03-03 05:03:06]  *** Contents of shared directory: ***
[2026-03-03 05:03:06] total 566708
[2026-03-03 05:03:06] -rw-r--r--. 2 boinc boinc    597947 Mar  3 03:07 input.tar.gz
[2026-03-03 05:03:06] -rw-r--r--. 2 boinc boinc 313293012 Mar  3 03:07 ATLAS.root_0
[2026-03-03 05:03:06] -rw-r--r--. 2 boinc boinc     15845 Mar  3 03:07 start_atlas.sh
[2026-03-03 05:03:06] -rw-------. 1 boinc boinc 265100687 Mar  3 05:01 HITS.pool.root.1
[2026-03-03 05:03:06] -rw-------. 1 boinc boinc   1290240 Mar  3 05:03 result.tar.gz
05:03:07 (2632621): run_atlas exited; CPU time 26782.513089
05:03:07 (2632621): called boinc_finish(0)

</stderr_txt>
]]>

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