Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:37:05 (1172718): wrapper (7.7.26015): starting
05:37:05 (1172718): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 05:37:05] Arguments: --nthreads 4
[2026-03-03 05:37:05] Threads: 4
[2026-03-03 05:37:05] Checking for CVMFS
[2026-03-03 05:37:05] No cvmfs_config command found, will try listing directly
[2026-03-03 05:37:05] CVMFS is ok
[2026-03-03 05:37:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 05:37:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 05:37:05] Further information can be found at the LHC@home message board.
[2026-03-03 05:37:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 05:37:05] Checking for apptainer binary...
[2026-03-03 05:37:05] which: no apptainer in ((null))
[2026-03-03 05:37:05] apptainer is not installed, using version from CVMFS
[2026-03-03 05:37:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 05:37:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-03 05:37:05] apptainer works
[2026-03-03 05:37:05] Set ATHENA_PROC_NUMBER=4
[2026-03-03 05:37:05] Set ATHENA_CORE_NUMBER=4
[2026-03-03 05:37:06] Starting ATLAS job with PandaID=7035840404
[2026-03-03 05:37:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 13:00:16]  *** The last 200 lines of the pilot log: ***
[2026-03-03 13:00:16] 2026-03-03 11:55:02,447 | INFO     | log transfer has been attempted: DONE
[2026-03-03 13:00:16] 2026-03-03 11:55:02,447 | INFO     | job 7035840404 has finished - writing final server update
[2026-03-03 13:00:16] 2026-03-03 11:55:02,447 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2650884/.job.ad'
[2026-03-03 13:00:16] 2026-03-03 11:55:02,447 | INFO     | total number of processed events: 400 (read)
[2026-03-03 13:00:16] 2026-03-03 11:55:02,460 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-7035840404/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 13:00:16] 2026-03-03 11:55:02,460 | INFO     | extracted standard info from prmon json
[2026-03-03 13:00:16] 2026-03-03 11:55:02,461 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 13:00:16] 2026-03-03 11:55:02,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 13:00:16] 2026-03-03 11:55:02,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 13:00:16] 2026-03-03 11:55:02,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 13:00:16] 2026-03-03 11:55:02,469 | INFO     | fitting pss+swap vs Time
[2026-03-03 13:00:16] 2026-03-03 11:55:02,470 | INFO     | sum of square deviations: 24653662247.5
[2026-03-03 13:00:16] 2026-03-03 11:55:02,474 | INFO     | sum of deviations: -20407654370.999985
[2026-03-03 13:00:16] 2026-03-03 11:55:02,475 | INFO     | mean x: 1772525752.5
[2026-03-03 13:00:16] 2026-03-03 11:55:02,475 | INFO     | mean y: 2348891.8930232557
[2026-03-03 13:00:16] 2026-03-03 11:55:02,475 | INFO     | intersect: 1469599175.3426876
[2026-03-03 13:00:16] 2026-03-03 11:55:02,475 | INFO     | chi2: 1.480524141662563
[2026-03-03 13:00:16] 2026-03-03 11:55:02,476 | INFO     | sum of square deviations: 23803609100.0
[2026-03-03 13:00:16] 2026-03-03 11:55:02,480 | INFO     | sum of deviations: -20389049127.0
[2026-03-03 13:00:16] 2026-03-03 11:55:02,481 | INFO     | mean x: 1772525600.0
[2026-03-03 13:00:16] 2026-03-03 11:55:02,481 | INFO     | mean y: 2348895.2494117646
[2026-03-03 13:00:16] 2026-03-03 11:55:02,481 | INFO     | intersect: 1520610743.0826108
[2026-03-03 13:00:16] 2026-03-03 11:55:02,481 | INFO     | chi2: 1.4801177846508564
[2026-03-03 13:00:16] 2026-03-03 11:55:02,482 | INFO     | current chi2=1.4801177846508564 (change=0.02744683455483729 %)
[2026-03-03 13:00:16] 2026-03-03 11:55:02,482 | INFO     | right removable region: 424
[2026-03-03 13:00:16] 2026-03-03 11:55:02,482 | INFO     | sum of square deviations: 23803609100.0
[2026-03-03 13:00:16] 2026-03-03 11:55:02,487 | INFO     | sum of deviations: -63931697698.00001
[2026-03-03 13:00:16] 2026-03-03 11:55:02,487 | INFO     | mean x: 1772525905.0
[2026-03-03 13:00:16] 2026-03-03 11:55:02,487 | INFO     | mean y: 2356634.9411764704
[2026-03-03 13:00:16] 2026-03-03 11:55:02,487 | INFO     | intersect: 4763004057.9546
[2026-03-03 13:00:16] 2026-03-03 11:55:02,488 | INFO     | chi2: 0.2886511718209957
[2026-03-03 13:00:16] 2026-03-03 11:55:02,488 | INFO     | current chi2=0.2886511718209957 (change=80.503447144276 %)
[2026-03-03 13:00:16] 2026-03-03 11:55:02,489 | INFO     | sum of square deviations: 22973323765.0
[2026-03-03 13:00:16] 2026-03-03 11:55:02,493 | INFO     | sum of deviations: -46514756115.50001
[2026-03-03 13:00:16] 2026-03-03 11:55:02,493 | INFO     | time since job start (26258s) is within the limit (349056.0s)
[2026-03-03 13:00:16] 2026-03-03 11:55:02,494 | INFO     | mean x: 1772526057.5
[2026-03-03 13:00:16] 2026-03-03 11:55:02,494 | INFO     | mean y: 2353431.1642857143
[2026-03-03 13:00:16] 2026-03-03 11:55:02,494 | INFO     | intersect: 3591238440.419769
[2026-03-03 13:00:16] 2026-03-03 11:55:02,495 | INFO     | chi2: 0.23611707227224502
[2026-03-03 13:00:16] 2026-03-03 11:55:02,495 | INFO     | current chi2=0.23611707227224502 (change=18.19985667036516 %)
[2026-03-03 13:00:16] 2026-03-03 11:55:02,495 | INFO     | left removable region: 20
[2026-03-03 13:00:16] 2026-03-03 11:55:02,496 | INFO     | sum of square deviations: 20446541505.0
[2026-03-03 13:00:16] 2026-03-03 11:55:02,500 | INFO     | sum of deviations: -6891226973.99998
[2026-03-03 13:00:16] 2026-03-03 11:55:02,500 | INFO     | mean x: 1772526179.5
[2026-03-03 13:00:16] 2026-03-03 11:55:02,500 | INFO     | mean y: 2345825.6584158414
[2026-03-03 13:00:16] 2026-03-03 11:55:02,500 | INFO     | intersect: 599751514.8946371
[2026-03-03 13:00:16] 2026-03-03 11:55:02,501 | INFO     | chi2: 0.07087645437464675
[2026-03-03 13:00:16] 2026-03-03 11:55:02,501 | INFO     | current memory leak: -0.34 B/s (using 404 data points, chi2=0.07)
[2026-03-03 13:00:16] 2026-03-03 11:55:02,502 | INFO     | could have reported an average CPU frequency of 2559 MHz (18 samples)
[2026-03-03 13:00:16] 2026-03-03 11:55:02,502 | INFO     | ..............................
[2026-03-03 13:00:16] 2026-03-03 11:55:02,502 | INFO     | . Timing measurements:
[2026-03-03 13:00:16] 2026-03-03 11:55:02,502 | INFO     | . get job = 0 s
[2026-03-03 13:00:16] 2026-03-03 11:55:02,502 | INFO     | . initial setup = 6 s
[2026-03-03 13:00:16] 2026-03-03 11:55:02,502 | INFO     | . payload setup = 6 s
[2026-03-03 13:00:16] 2026-03-03 11:55:02,502 | INFO     | . stage-in = 0 s
[2026-03-03 13:00:16] 2026-03-03 11:55:02,502 | INFO     | . payload execution = 26233 s
[2026-03-03 13:00:16] 2026-03-03 11:55:02,502 | INFO     | . stage-out = 1 s
[2026-03-03 13:00:16] 2026-03-03 11:55:02,502 | INFO     | . log creation = 0 s
[2026-03-03 13:00:16] 2026-03-03 11:55:02,502 | INFO     | ..............................
[2026-03-03 13:00:16] 2026-03-03 11:55:02,599 | INFO     | 
[2026-03-03 13:00:16] 2026-03-03 11:55:02,600 | INFO     | job summary report
[2026-03-03 13:00:16] 2026-03-03 11:55:02,600 | INFO     | --------------------------------------------------
[2026-03-03 13:00:16] 2026-03-03 11:55:02,600 | INFO     | PanDA job id: 7035840404
[2026-03-03 13:00:16] 2026-03-03 11:55:02,600 | INFO     | task id: 48847122
[2026-03-03 13:00:16] 2026-03-03 11:55:02,600 | INFO     | errors: (none)
[2026-03-03 13:00:16] 2026-03-03 11:55:02,600 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 13:00:16] 2026-03-03 11:55:02,600 | INFO     | pilot state: finished 
[2026-03-03 13:00:16] 2026-03-03 11:55:02,600 | INFO     | transexitcode: 0
[2026-03-03 13:00:16] 2026-03-03 11:55:02,600 | INFO     | exeerrorcode: 0
[2026-03-03 13:00:16] 2026-03-03 11:55:02,601 | INFO     | exeerrordiag: 
[2026-03-03 13:00:16] 2026-03-03 11:55:02,601 | INFO     | exitcode: 0
[2026-03-03 13:00:16] 2026-03-03 11:55:02,601 | INFO     | exitmsg: OK
[2026-03-03 13:00:16] 2026-03-03 11:55:02,601 | INFO     | cpuconsumptiontime: 99896 s
[2026-03-03 13:00:16] 2026-03-03 11:55:02,601 | INFO     | nevents: 400
[2026-03-03 13:00:16] 2026-03-03 11:55:02,601 | INFO     | neventsw: 0
[2026-03-03 13:00:16] 2026-03-03 11:55:02,601 | INFO     | pid: 1181525
[2026-03-03 13:00:16] 2026-03-03 11:55:02,601 | INFO     | pgrp: 1181525
[2026-03-03 13:00:16] 2026-03-03 11:55:02,601 | INFO     | corecount: 4
[2026-03-03 13:00:16] 2026-03-03 11:55:02,601 | INFO     | event service: False
[2026-03-03 13:00:16] 2026-03-03 11:55:02,601 | INFO     | sizes: {0: 2282169, 1: 2282431, 11: 2282459, 26244: 2319062, 26245: 2332937, 26246: 2333075}
[2026-03-03 13:00:16] 2026-03-03 11:55:02,601 | INFO     | --------------------------------------------------
[2026-03-03 13:00:16] 2026-03-03 11:55:02,602 | INFO     | 
[2026-03-03 13:00:16] 2026-03-03 11:55:02,602 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2026-03-03 13:00:16] 2026-03-03 11:55:02,624 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,624 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,624 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,624 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,625 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,625 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,625 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,625 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,625 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,625 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,625 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,625 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,626 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,626 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,626 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,626 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 13:00:16] 2026-03-03 11:55:02,626 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,626 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 13:00:16] 2026-03-03 11:55:02,626 | INFO     | job 7035840404 has completed (purged errors)
[2026-03-03 13:00:16] 2026-03-03 11:55:02,626 | INFO     | overall cleanup function is called
[2026-03-03 13:00:16] 2026-03-03 11:55:03,634 | INFO     | --- collectZombieJob: --- 10, [1181525]
[2026-03-03 13:00:16] 2026-03-03 11:55:03,635 | INFO     | zombie collector waiting for pid 1181525
[2026-03-03 13:00:16] 2026-03-03 11:55:03,635 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 13:00:16] 2026-03-03 11:55:03,635 | INFO     | collected zombie processes
[2026-03-03 13:00:16] 2026-03-03 11:55:03,635 | INFO     | will attempt to kill all subprocesses of pid=1181525
[2026-03-03 13:00:16] 2026-03-03 11:55:04,415 | INFO     | PID=1176788 has CPU usage=13.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-03 13:00:16] 2026-03-03 11:55:04,415 | INFO     | .. there are 10 such processes running
[2026-03-03 13:00:16] 2026-03-03 11:55:04,489 | INFO     | process IDs to be killed: [1181525] (in reverse order)
[2026-03-03 13:00:16] 2026-03-03 11:55:04,607 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 13:00:16] 2026-03-03 11:55:04,608 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 13:00:16] 2026-03-03 11:55:04,622 | INFO     | did not find any defunct processes belonging to 1181525
[2026-03-03 13:00:16] 2026-03-03 11:55:04,635 | INFO     | did not find any defunct processes belonging to 1181525
[2026-03-03 13:00:16] 2026-03-03 11:55:04,635 | INFO     | ready for new job
[2026-03-03 13:00:16] 2026-03-03 11:55:04,635 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 13:00:16] 2026-03-03 11:55:04,639 | INFO     | **************************************
[2026-03-03 13:00:16] 2026-03-03 11:55:04,639 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 13:00:16] 2026-03-03 11:55:04,639 | INFO     | **************************************
[2026-03-03 13:00:16] 2026-03-03 11:55:04,639 | INFO     | 
[2026-03-03 13:00:16] 2026-03-03 11:55:04,643 | INFO     | architecture information:
[2026-03-03 13:00:16] 2026-03-03 11:55:04,643 | INFO     | executing command: cat /etc/os-release
[2026-03-03 13:00:16] 2026-03-03 11:55:04,658 | INFO     | cat /etc/os-release:
[2026-03-03 13:00:16] NAME="CentOS Linux"
[2026-03-03 13:00:16] VERSION="7 (Core)"
[2026-03-03 13:00:16] ID="centos"
[2026-03-03 13:00:16] ID_LIKE="rhel fedora"
[2026-03-03 13:00:16] VERSION_ID="7"
[2026-03-03 13:00:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 13:00:16] ANSI_COLOR="0;31"
[2026-03-03 13:00:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 13:00:16] HOME_URL="https://www.centos.org/"
[2026-03-03 13:00:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 13:00:16] 
[2026-03-03 13:00:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 13:00:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 13:00:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 13:00:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 13:00:16] 
[2026-03-03 13:00:16] 2026-03-03 11:55:04,658 | INFO     | **************************************
[2026-03-03 13:00:16] 2026-03-03 11:55:05,161 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2026-03-03 13:00:16] 2026-03-03 11:55:05,177 | INFO     | sufficient remaining disk space (670324228096 B)
[2026-03-03 13:00:16] 2026-03-03 11:55:05,177 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 13:00:16] 2026-03-03 11:55:05,177 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 13:00:16] 2026-03-03 11:55:05,178 | INFO     | update_server=False
[2026-03-03 13:00:16] 2026-03-03 11:55:05,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 13:00:16] 2026-03-03 11:55:05,178 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 13:00:16] 2026-03-03 11:55:05,178 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-03 13:00:16] 2026-03-03 11:55:05,179 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 13:00:16] 2026-03-03 11:55:05,179 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 13:00:16] 2026-03-03 11:55:05,179 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 13:00:16] 2026-03-03 11:55:05,253 | INFO     | all job control threads have been joined
[2026-03-03 13:00:16] 2026-03-03 11:55:05,871 | INFO     | all data control threads have been joined
[2026-03-03 13:00:16] 2026-03-03 11:55:06,182 | INFO     | [job] retrieve thread has finished
[2026-03-03 13:00:16] 2026-03-03 11:55:06,221 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 13:00:16] 2026-03-03 11:55:06,259 | INFO     | [job] control thread has finished
[2026-03-03 13:00:16] 2026-03-03 11:55:06,360 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 13:00:16] 2026-03-03 11:55:06,363 | INFO     | all payload control threads have been joined
[2026-03-03 13:00:16] 2026-03-03 11:55:06,407 | WARNING  | process 1181525 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 13:00:16] 2026-03-03 11:55:06,685 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 13:00:16] 2026-03-03 11:55:06,738 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 13:00:16] 2026-03-03 11:55:06,876 | INFO     | [data] control thread has finished
[2026-03-03 13:00:16] 2026-03-03 11:55:06,919 | INFO     | [job] validate thread has finished
[2026-03-03 13:00:16] 2026-03-03 11:55:06,942 | INFO     | [data] copytool_in thread has finished
[2026-03-03 13:00:16] 2026-03-03 11:55:07,058 | INFO     | number of running child processes to parent process 1181525: 1
[2026-03-03 13:00:16] 2026-03-03 11:55:07,059 | INFO     | maximum number of monitored processes: 6
[2026-03-03 13:00:16] 2026-03-03 11:55:07,059 | INFO     | aborting job monitoring since job object (job id=7035840404) has expired
[2026-03-03 13:00:16] 2026-03-03 11:55:07,059 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 13:00:16] 2026-03-03 11:55:07,059 | INFO     | will abort loop
[2026-03-03 13:00:16] 2026-03-03 11:55:07,139 | INFO     | [payload] failed_post thread has finished
[2026-03-03 13:00:16] 2026-03-03 11:55:07,184 | INFO     | [data] copytool_out thread has finished
[2026-03-03 13:00:16] 2026-03-03 11:55:07,365 | INFO     | [payload] control thread has finished
[2026-03-03 13:00:16] 2026-03-03 11:55:07,474 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 13:00:16] 2026-03-03 11:55:07,531 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 13:00:16] 2026-03-03 11:55:07,540 | INFO     | [payload] validate_post thread has finished
[2026-03-03 13:00:16] 2026-03-03 11:55:07,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 13:00:16] 2026-03-03 11:55:08,064 | INFO     | [job] job monitor thread has finished
[2026-03-03 13:00:16] 2026-03-03 11:55:08,441 | INFO     | [monitor] cgroup control has ended
[2026-03-03 13:00:16] 2026-03-03 11:55:08,612 | INFO     | [job] queue monitor thread has finished
[2026-03-03 13:00:16] 2026-03-03 11:55:11,480 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 13:00:16] 2026-03-03 11:55:11,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23105999386432)>', '<ExcThread(monitor, started 23105750951680)>']
[2026-03-03 13:00:16] 2026-03-03 11:55:12,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 13:00:16] 2026-03-03 11:55:12,212 | INFO     | [monitor] control thread has ended
[2026-03-03 13:00:16] 2026-03-03 11:55:16,902 | INFO     | all workflow threads have been joined
[2026-03-03 13:00:16] 2026-03-03 11:55:16,902 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 13:00:16] 2026-03-03 11:55:16,903 | INFO     | traces error code: 0
[2026-03-03 13:00:16] 2026-03-03 11:55:16,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 13:00:16] 2026-03-03 11:55:17,044 [wrapper] ==== pilot stdout END ====
[2026-03-03 13:00:16] 2026-03-03 11:55:17,047 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 13:00:16] 2026-03-03 11:55:17,050 [wrapper] pilotpid: 1176788
[2026-03-03 13:00:16] 2026-03-03 11:55:17,052 [wrapper] Pilot exit status: 0
[2026-03-03 13:00:16] 2026-03-03 11:55:17,062 [wrapper] pandaids: 7035840404
[2026-03-03 13:00:16] 2026-03-03 11:55:17,133 [wrapper] cleanup supervisor_pilot 1476790 1176789
[2026-03-03 13:00:16] 2026-03-03 11:55:17,136 [wrapper] Test setup, not cleaning
[2026-03-03 13:00:16] 2026-03-03 11:55:17,138 [wrapper] apfmon messages muted
[2026-03-03 13:00:16] 2026-03-03 11:55:17,141 [wrapper] ==== wrapper stdout END ====
[2026-03-03 13:00:16] 2026-03-03 11:55:17,143 [wrapper] ==== wrapper stderr END ====
[2026-03-03 13:00:16]  *** Error codes and diagnostics ***
[2026-03-03 13:00:16]     "exeErrorCode": 0,
[2026-03-03 13:00:16]     "exeErrorDiag": "",
[2026-03-03 13:00:16]     "pilotErrorCode": 0,
[2026-03-03 13:00:16]     "pilotErrorDiag": "",
[2026-03-03 13:00:16]  *** Listing of results directory ***
[2026-03-03 13:00:16] total 439096
[2026-03-03 13:00:16] -rw-r--r-- 1 boinc boinc    584627 Mar  2 05:46 pilot3.tar.gz
[2026-03-03 13:00:16] -rwx------ 1 boinc boinc     36322 Mar  2 05:48 runpilot2-wrapper.sh
[2026-03-03 13:00:16] -rw-r--r-- 1 boinc boinc      5111 Mar  2 05:49 queuedata.json
[2026-03-03 13:00:16] -rw-r--r-- 1 boinc boinc       100 Mar  3 05:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 13:00:16] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 05:37 run_atlas
[2026-03-03 13:00:16] -rw-r--r-- 1 boinc boinc       105 Mar  3 05:37 job.xml
[2026-03-03 13:00:16] -rw-r--r-- 2 boinc boinc 228796445 Mar  3 05:37 EVNT.48453019._000003.pool.root.1
[2026-03-03 13:00:16] -rw-r--r-- 1 boinc boinc      6641 Mar  3 05:37 init_data.xml
[2026-03-03 13:00:16] -rw-r--r-- 2 boinc boinc     15845 Mar  3 05:37 start_atlas.sh
[2026-03-03 13:00:16] drwxrwx--x 2 boinc boinc      4096 Mar  3 05:37 shared
[2026-03-03 13:00:16] -rw-r--r-- 2 boinc boinc    597991 Mar  3 05:37 input.tar.gz
[2026-03-03 13:00:16] -rw-r--r-- 1 boinc boinc         0 Mar  3 05:37 boinc_lockfile
[2026-03-03 13:00:16] -rw-r--r-- 1 boinc boinc      2694 Mar  3 05:37 pandaJob.out
[2026-03-03 13:00:16] -rw------- 1 boinc boinc    997730 Mar  3 05:37 agis_schedconf.cvmfs.json
[2026-03-03 13:00:16] -rw------- 1 boinc boinc       452 Mar  3 05:37 workernode_map.json
[2026-03-03 13:00:16] drwx------ 5 boinc boinc      4096 Mar  3 05:37 pilot3
[2026-03-03 13:00:16] -rw------- 1 boinc boinc 208500764 Mar  3 12:54 HITS.48847122._000055.pool.root.1
[2026-03-03 13:00:16] -rw------- 1 boinc boinc        95 Mar  3 12:54 pilot_heartbeat.json
[2026-03-03 13:00:16] -rw-r--r-- 1 boinc boinc       530 Mar  3 12:54 boinc_task_state.xml
[2026-03-03 13:00:16] -rw------- 1 boinc boinc      1044 Mar  3 12:54 memory_monitor_summary.json
[2026-03-03 13:00:16] -rw------- 1 boinc boinc   1516104 Mar  3 12:55 agis_ddmendpoints.agis.ALL.json
[2026-03-03 13:00:16] -rw------- 1 boinc boinc    557119 Mar  3 12:55 log.48847122._000055.job.log.tgz.1
[2026-03-03 13:00:16] -rw------- 1 boinc boinc      6388 Mar  3 12:55 heartbeat.json
[2026-03-03 13:00:16] -rw------- 1 boinc boinc      5090 Mar  3 12:55 pilotlog.txt
[2026-03-03 13:00:16] -rw------- 1 boinc boinc   3643007 Mar  3 12:55 log.48847122._000055.job.log.1
[2026-03-03 13:00:16] -rw------- 1 boinc boinc       357 Mar  3 12:55 output.list
[2026-03-03 13:00:16] -rw-r--r-- 1 boinc boinc       620 Mar  3 12:55 runtime_log
[2026-03-03 13:00:16] -rw------- 1 boinc boinc   4218880 Mar  3 12:55 result.tar.gz
[2026-03-03 13:00:16] -rw-r--r-- 1 boinc boinc      9205 Mar  3 12:55 runtime_log.err
[2026-03-03 13:00:16] -rw------- 1 boinc boinc       667 Mar  3 12:55 OgXMDmgNAH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmCeALDmiiTJHm.diag
[2026-03-03 13:00:16] -rw-r--r-- 1 boinc boinc        28 Mar  3 12:59 wrapper_checkpoint.txt
[2026-03-03 13:00:16] -rw-r--r-- 1 boinc boinc      8192 Mar  3 13:00 boinc_mmap_file
[2026-03-03 13:00:16] -rw-r--r-- 1 boinc boinc     21146 Mar  3 13:00 stderr.txt
[2026-03-03 13:00:16] HITS file was successfully produced:
[2026-03-03 13:00:16] -rw------- 1 boinc boinc 208500764 Mar  3 12:54 shared/HITS.pool.root.1
[2026-03-03 13:00:16]  *** Contents of shared directory: ***
[2026-03-03 13:00:16] total 431780
[2026-03-03 13:00:16] -rw-r--r-- 2 boinc boinc 228796445 Mar  3 05:37 ATLAS.root_0
[2026-03-03 13:00:16] -rw-r--r-- 2 boinc boinc     15845 Mar  3 05:37 start_atlas.sh
[2026-03-03 13:00:16] -rw-r--r-- 2 boinc boinc    597991 Mar  3 05:37 input.tar.gz
[2026-03-03 13:00:16] -rw------- 1 boinc boinc 208500764 Mar  3 12:54 HITS.pool.root.1
[2026-03-03 13:00:16] -rw------- 1 boinc boinc   4218880 Mar  3 12:55 result.tar.gz
13:00:18 (1172718): run_atlas exited; CPU time 101103.417284
13:00:18 (1172718): called boinc_finish(0)

</stderr_txt>
]]>

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