Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
16:09:01 (17430): wrapper (7.7.26015): starting
16:09:01 (17430): wrapper: running run_atlas (--nthreads 12)
[2026-03-04 16:09:01] Arguments: --nthreads 12
[2026-03-04 16:09:01] Threads: 12
[2026-03-04 16:09:01] Checking for CVMFS
[2026-03-04 16:09:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 16:09:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 16:09:02] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 16:09:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 16:09:02] 2.13.3.0 4145730 59 44576 156880 0 188 3506562 4096001 0 130560 0 40353 99.958 2887 1567 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-04 16:09:02] CVMFS is ok
[2026-03-04 16:09:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 16:09:02] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-04 16:09:02] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-04 16:09:02] Further information can be found at the LHC@home message board.
[2026-03-04 16:09:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 16:09:02] Checking for apptainer binary...
[2026-03-04 16:09:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 16:09:02] Running /usr/bin/apptainer --version
[2026-03-04 16:09:02] apptainer version 1.4.5
[2026-03-04 16:09:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 16:09:02] BoincUbuntu
[2026-03-04 16:09:02] apptainer works
[2026-03-04 16:09:02] Set ATHENA_PROC_NUMBER=12
[2026-03-04 16:09:02] Set ATHENA_CORE_NUMBER=12
[2026-03-04 16:09:02] Starting ATLAS job with PandaID=7035725738
[2026-03-04 16:09:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 17:52:44]  *** The last 200 lines of the pilot log: ***
[2026-03-04 17:52:44] 2026-03-04 17:52:10,958 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 17:52:44] 2026-03-04 17:52:10,958 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 17:52:44] 2026-03-04 17:52:10,958 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 17:52:44] 2026-03-04 17:52:10,958 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 17:52:44] 2026-03-04 17:52:10,959 | INFO     | fitting pss+swap vs Time
[2026-03-04 17:52:44] 2026-03-04 17:52:10,959 | INFO     | sum of square deviations: 319447850.0
[2026-03-04 17:52:44] 2026-03-04 17:52:10,960 | INFO     | sum of deviations: 15247737509.999996
[2026-03-04 17:52:44] 2026-03-04 17:52:10,960 | INFO     | mean x: 1772643624.0
[2026-03-04 17:52:44] 2026-03-04 17:52:10,960 | INFO     | mean y: 3067498.3168316833
[2026-03-04 17:52:44] 2026-03-04 17:52:10,960 | INFO     | intersect: -84607940769.62778
[2026-03-04 17:52:44] 2026-03-04 17:52:10,960 | INFO     | chi2: 1.3711001272926882
[2026-03-04 17:52:44] 2026-03-04 17:52:10,960 | INFO     | sum of square deviations: 274312120.0
[2026-03-04 17:52:44] 2026-03-04 17:52:10,960 | INFO     | sum of deviations: 20213870455.5
[2026-03-04 17:52:44] 2026-03-04 17:52:10,960 | INFO     | mean x: 1772643471.5
[2026-03-04 17:52:44] 2026-03-04 17:52:10,961 | INFO     | mean y: 3084291.3645833335
[2026-03-04 17:52:44] 2026-03-04 17:52:10,961 | INFO     | intersect: -130621787466.72182
[2026-03-04 17:52:44] 2026-03-04 17:52:10,961 | INFO     | chi2: 1.273410038782905
[2026-03-04 17:52:44] 2026-03-04 17:52:10,961 | INFO     | current chi2=1.273410038782905 (change=7.1249419765336555 %)
[2026-03-04 17:52:44] 2026-03-04 17:52:10,961 | INFO     | right removable region: 95
[2026-03-04 17:52:44] 2026-03-04 17:52:10,961 | INFO     | sum of square deviations: 274312120.0
[2026-03-04 17:52:44] 2026-03-04 17:52:10,961 | INFO     | sum of deviations: -2198107001.000001
[2026-03-04 17:52:44] 2026-03-04 17:52:10,961 | INFO     | mean x: 1772643776.5
[2026-03-04 17:52:44] 2026-03-04 17:52:10,961 | INFO     | mean y: 3125332.1458333335
[2026-03-04 17:52:44] 2026-03-04 17:52:10,961 | INFO     | intersect: 14207604140.459995
[2026-03-04 17:52:44] 2026-03-04 17:52:10,962 | INFO     | chi2: 0.13268694266304998
[2026-03-04 17:52:44] 2026-03-04 17:52:10,962 | INFO     | current chi2=0.13268694266304998 (change=90.32259278357391 %)
[2026-03-04 17:52:44] 2026-03-04 17:52:10,962 | INFO     | sum of square deviations: 233641590.0
[2026-03-04 17:52:44] 2026-03-04 17:52:10,962 | INFO     | sum of deviations: -4536655644.0
[2026-03-04 17:52:44] 2026-03-04 17:52:10,962 | INFO     | mean x: 1772643929.0
[2026-03-04 17:52:44] 2026-03-04 17:52:10,962 | INFO     | mean y: 3133867.032967033
[2026-03-04 17:52:44] 2026-03-04 17:52:10,962 | INFO     | intersect: 34422840929.03415
[2026-03-04 17:52:44] 2026-03-04 17:52:10,962 | INFO     | chi2: 0.09510041019739775
[2026-03-04 17:52:44] 2026-03-04 17:52:10,962 | INFO     | current chi2=0.09510041019739775 (change=28.327227767317563 %)
[2026-03-04 17:52:44] 2026-03-04 17:52:10,962 | INFO     | sum of square deviations: 197203697.5
[2026-03-04 17:52:44] 2026-03-04 17:52:10,963 | INFO     | sum of deviations: -4830103037.0
[2026-03-04 17:52:44] 2026-03-04 17:52:10,963 | INFO     | mean x: 1772644081.5
[2026-03-04 17:52:44] 2026-03-04 17:52:10,963 | INFO     | mean y: 3135081.6511627906
[2026-03-04 17:52:44] 2026-03-04 17:52:10,963 | INFO     | intersect: 43420442516.128784
[2026-03-04 17:52:44] 2026-03-04 17:52:10,963 | INFO     | chi2: 0.09208000149614541
[2026-03-04 17:52:44] 2026-03-04 17:52:10,963 | INFO     | current chi2=0.09208000149614541 (change=3.176020686959123 %)
[2026-03-04 17:52:44] 2026-03-04 17:52:10,963 | INFO     | left removable region: 30
[2026-03-04 17:52:44] 2026-03-04 17:52:10,963 | INFO     | sum of square deviations: 85136480.0
[2026-03-04 17:52:44] 2026-03-04 17:52:10,963 | INFO     | sum of deviations: 479059412.99999994
[2026-03-04 17:52:44] 2026-03-04 17:52:10,963 | INFO     | mean x: 1772644356.0
[2026-03-04 17:52:44] 2026-03-04 17:52:10,963 | INFO     | mean y: 3169306.846153846
[2026-03-04 17:52:44] 2026-03-04 17:52:10,964 | INFO     | intersect: -9971426361.698317
[2026-03-04 17:52:44] 2026-03-04 17:52:10,964 | INFO     | chi2: 5.325293056133922e-05
[2026-03-04 17:52:44] 2026-03-04 17:52:10,964 | INFO     | current memory leak: 5.63 B/s (using 65 data points, chi2=0.00)
[2026-03-04 17:52:44] 2026-03-04 17:52:10,964 | INFO     | could have reported an average CPU frequency of 3650 MHz (7 samples)
[2026-03-04 17:52:44] 2026-03-04 17:52:10,964 | INFO     | ..............................
[2026-03-04 17:52:44] 2026-03-04 17:52:10,964 | INFO     | . Timing measurements:
[2026-03-04 17:52:44] 2026-03-04 17:52:10,964 | INFO     | . get job = 0 s
[2026-03-04 17:52:44] 2026-03-04 17:52:10,964 | INFO     | . initial setup = 4 s
[2026-03-04 17:52:44] 2026-03-04 17:52:10,964 | INFO     | . payload setup = 4 s
[2026-03-04 17:52:44] 2026-03-04 17:52:10,964 | INFO     | . stage-in = 0 s
[2026-03-04 17:52:44] 2026-03-04 17:52:10,964 | INFO     | . payload execution = 6156 s
[2026-03-04 17:52:44] 2026-03-04 17:52:10,964 | INFO     | . stage-out = 0 s
[2026-03-04 17:52:44] 2026-03-04 17:52:10,964 | INFO     | . log creation = 0 s
[2026-03-04 17:52:44] 2026-03-04 17:52:10,964 | INFO     | ..............................
[2026-03-04 17:52:44] 2026-03-04 17:52:11,208 | INFO     | 
[2026-03-04 17:52:44] 2026-03-04 17:52:11,208 | INFO     | job summary report
[2026-03-04 17:52:44] 2026-03-04 17:52:11,208 | INFO     | --------------------------------------------------
[2026-03-04 17:52:44] 2026-03-04 17:52:11,208 | INFO     | PanDA job id: 7035725738
[2026-03-04 17:52:44] 2026-03-04 17:52:11,208 | INFO     | task id: 48844171
[2026-03-04 17:52:44] 2026-03-04 17:52:11,208 | INFO     | errors: (none)
[2026-03-04 17:52:44] 2026-03-04 17:52:11,209 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 17:52:44] 2026-03-04 17:52:11,209 | INFO     | pilot state: finished 
[2026-03-04 17:52:44] 2026-03-04 17:52:11,209 | INFO     | transexitcode: 0
[2026-03-04 17:52:44] 2026-03-04 17:52:11,209 | INFO     | exeerrorcode: 0
[2026-03-04 17:52:44] 2026-03-04 17:52:11,209 | INFO     | exeerrordiag: 
[2026-03-04 17:52:44] 2026-03-04 17:52:11,209 | INFO     | exitcode: 0
[2026-03-04 17:52:44] 2026-03-04 17:52:11,209 | INFO     | exitmsg: OK
[2026-03-04 17:52:44] 2026-03-04 17:52:11,209 | INFO     | cpuconsumptiontime: 65441 s
[2026-03-04 17:52:44] 2026-03-04 17:52:11,209 | INFO     | nevents: 400
[2026-03-04 17:52:44] 2026-03-04 17:52:11,209 | INFO     | neventsw: 0
[2026-03-04 17:52:44] 2026-03-04 17:52:11,209 | INFO     | pid: 26862
[2026-03-04 17:52:44] 2026-03-04 17:52:11,209 | INFO     | pgrp: 26862
[2026-03-04 17:52:44] 2026-03-04 17:52:11,209 | INFO     | corecount: 12
[2026-03-04 17:52:44] 2026-03-04 17:52:11,209 | INFO     | event service: False
[2026-03-04 17:52:44] 2026-03-04 17:52:11,209 | INFO     | sizes: {0: 2286963, 1: 2287169, 11: 2287197, 6164: 2314280, 6165: 2323486}
[2026-03-04 17:52:44] 2026-03-04 17:52:11,209 | INFO     | --------------------------------------------------
[2026-03-04 17:52:44] 2026-03-04 17:52:11,210 | INFO     | 
[2026-03-04 17:52:44] 2026-03-04 17:52:11,210 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-03-04 17:52:44] 2026-03-04 17:52:11,229 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,229 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,229 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,229 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,229 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,229 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,229 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,230 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 17:52:44] 2026-03-04 17:52:11,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,230 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 17:52:44] 2026-03-04 17:52:11,230 | INFO     | job 7035725738 has completed (purged errors)
[2026-03-04 17:52:44] 2026-03-04 17:52:11,230 | INFO     | overall cleanup function is called
[2026-03-04 17:52:44] 2026-03-04 17:52:11,757 | INFO     | PID=21775 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-04 17:52:44] 2026-03-04 17:52:12,239 | INFO     | --- collectZombieJob: --- 10, [26862]
[2026-03-04 17:52:44] 2026-03-04 17:52:12,239 | INFO     | zombie collector waiting for pid 26862
[2026-03-04 17:52:44] 2026-03-04 17:52:12,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 17:52:44] 2026-03-04 17:52:12,239 | INFO     | collected zombie processes
[2026-03-04 17:52:44] 2026-03-04 17:52:12,239 | INFO     | will attempt to kill all subprocesses of pid=26862
[2026-03-04 17:52:44] 2026-03-04 17:52:12,314 | INFO     | process IDs to be killed: [26862] (in reverse order)
[2026-03-04 17:52:44] 2026-03-04 17:52:12,365 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 17:52:44] 2026-03-04 17:52:12,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 17:52:44] 2026-03-04 17:52:12,367 | INFO     | did not find any defunct processes belonging to 26862
[2026-03-04 17:52:44] 2026-03-04 17:52:12,369 | INFO     | did not find any defunct processes belonging to 26862
[2026-03-04 17:52:44] 2026-03-04 17:52:12,369 | INFO     | ready for new job
[2026-03-04 17:52:44] 2026-03-04 17:52:12,369 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 17:52:44] 2026-03-04 17:52:12,371 | INFO     | **************************************
[2026-03-04 17:52:44] 2026-03-04 17:52:12,371 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 17:52:44] 2026-03-04 17:52:12,371 | INFO     | **************************************
[2026-03-04 17:52:44] 2026-03-04 17:52:12,371 | INFO     | 
[2026-03-04 17:52:44] 2026-03-04 17:52:12,371 | INFO     | architecture information:
[2026-03-04 17:52:44] 2026-03-04 17:52:12,372 | INFO     | executing command: cat /etc/os-release
[2026-03-04 17:52:44] 2026-03-04 17:52:12,388 | INFO     | cat /etc/os-release:
[2026-03-04 17:52:44] NAME="CentOS Linux"
[2026-03-04 17:52:44] VERSION="7 (Core)"
[2026-03-04 17:52:44] ID="centos"
[2026-03-04 17:52:44] ID_LIKE="rhel fedora"
[2026-03-04 17:52:44] VERSION_ID="7"
[2026-03-04 17:52:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 17:52:44] ANSI_COLOR="0;31"
[2026-03-04 17:52:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 17:52:44] HOME_URL="https://www.centos.org/"
[2026-03-04 17:52:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 17:52:44] 
[2026-03-04 17:52:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 17:52:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 17:52:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 17:52:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 17:52:44] 
[2026-03-04 17:52:44] 2026-03-04 17:52:12,388 | INFO     | **************************************
[2026-03-04 17:52:44] 2026-03-04 17:52:12,890 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-04 17:52:44] 2026-03-04 17:52:12,908 | INFO     | sufficient remaining disk space (278910730240 B)
[2026-03-04 17:52:44] 2026-03-04 17:52:12,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 17:52:44] 2026-03-04 17:52:12,908 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 17:52:44] 2026-03-04 17:52:12,908 | INFO     | update_server=False
[2026-03-04 17:52:44] 2026-03-04 17:52:12,908 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 17:52:44] 2026-03-04 17:52:12,908 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 17:52:44] 2026-03-04 17:52:12,908 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 17:52:44] 2026-03-04 17:52:13,301 | INFO     | all job control threads have been joined
[2026-03-04 17:52:44] 2026-03-04 17:52:13,589 | INFO     | all data control threads have been joined
[2026-03-04 17:52:44] 2026-03-04 17:52:13,901 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 17:52:44] 2026-03-04 17:52:13,913 | INFO     | [job] queue monitor thread has finished
[2026-03-04 17:52:44] 2026-03-04 17:52:13,913 | INFO     | [job] retrieve thread has finished
[2026-03-04 17:52:44] 2026-03-04 17:52:13,940 | INFO     | [data] copytool_in thread has finished
[2026-03-04 17:52:44] 2026-03-04 17:52:13,984 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 17:52:44] 2026-03-04 17:52:14,212 | INFO     | all payload control threads have been joined
[2026-03-04 17:52:44] 2026-03-04 17:52:14,264 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 17:52:44] 2026-03-04 17:52:14,306 | INFO     | [job] control thread has finished
[2026-03-04 17:52:44] 2026-03-04 17:52:14,524 | INFO     | [payload] validate_post thread has finished
[2026-03-04 17:52:44] 2026-03-04 17:52:14,594 | INFO     | [data] control thread has finished
[2026-03-04 17:52:44] 2026-03-04 17:52:15,180 | INFO     | [job] validate thread has finished
[2026-03-04 17:52:44] 2026-03-04 17:52:15,203 | INFO     | [payload] failed_post thread has finished
[2026-03-04 17:52:44] 2026-03-04 17:52:15,217 | INFO     | [payload] control thread has finished
[2026-03-04 17:52:44] 2026-03-04 17:52:15,318 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 17:52:44] 2026-03-04 17:52:15,520 | WARNING  | process 26862 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 17:52:44] 2026-03-04 17:52:15,577 | INFO     | using path: /var/lib/boinc-client/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 17:52:44] 2026-03-04 17:52:15,650 | INFO     | number of running child processes to parent process 26862: 1
[2026-03-04 17:52:44] 2026-03-04 17:52:15,650 | INFO     | maximum number of monitored processes: 6
[2026-03-04 17:52:44] 2026-03-04 17:52:15,650 | INFO     | aborting job monitoring since job object (job id=7035725738) has expired
[2026-03-04 17:52:44] 2026-03-04 17:52:15,650 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 17:52:44] 2026-03-04 17:52:15,650 | INFO     | will abort loop
[2026-03-04 17:52:44] 2026-03-04 17:52:15,906 | INFO     | [data] copytool_out thread has finished
[2026-03-04 17:52:44] 2026-03-04 17:52:16,654 | INFO     | [job] job monitor thread has finished
[2026-03-04 17:52:44] 2026-03-04 17:52:16,913 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 17:52:44] 2026-03-04 17:52:23,455 | INFO     | job.realtimelogging is not enabled
[2026-03-04 17:52:44] 2026-03-04 17:52:24,460 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 17:52:44] 2026-03-04 17:52:24,945 | INFO     | [monitor] cgroup control has ended
[2026-03-04 17:52:44] 2026-03-04 17:52:26,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140491353900864)>', '<ExcThread(monitor, started 140490720667392)>']
[2026-03-04 17:52:44] 2026-03-04 17:52:31,774 | INFO     | all workflow threads have been joined
[2026-03-04 17:52:44] 2026-03-04 17:52:31,774 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 17:52:44] 2026-03-04 17:52:31,774 | INFO     | traces error code: 0
[2026-03-04 17:52:44] 2026-03-04 17:52:31,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 17:52:44] 2026-03-04 17:52:43,901 | INFO     | PID=21775 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-04 17:52:44] 2026-03-04 17:52:43,901 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 17:52:44] 2026-03-04 17:52:43,901 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 17:52:44] 2026-03-04 17:52:43,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 17:52:44] 2026-03-04 17:52:43,902 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 17:52:44] 2026-03-04 17:52:43,902 | INFO     | [monitor] control thread has ended
[2026-03-04 17:52:44] 2026-03-04 17:52:43,983 [wrapper] ==== pilot stdout END ====
[2026-03-04 17:52:44] 2026-03-04 17:52:43,985 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 17:52:44] 2026-03-04 17:52:43,987 [wrapper] pilotpid: 21775
[2026-03-04 17:52:44] 2026-03-04 17:52:43,991 [wrapper] Pilot exit status: 0
[2026-03-04 17:52:44] 2026-03-04 17:52:43,998 [wrapper] pandaids: 7035725738
[2026-03-04 17:52:44] 2026-03-04 17:52:44,028 [wrapper] cleanup supervisor_pilot  110331 21776
[2026-03-04 17:52:44] 2026-03-04 17:52:44,030 [wrapper] Test setup, not cleaning
[2026-03-04 17:52:44] 2026-03-04 17:52:44,032 [wrapper] apfmon messages muted
[2026-03-04 17:52:44] 2026-03-04 17:52:44,034 [wrapper] ==== wrapper stdout END ====
[2026-03-04 17:52:44] 2026-03-04 17:52:44,036 [wrapper] ==== wrapper stderr END ====
[2026-03-04 17:52:44]  *** Error codes and diagnostics ***
[2026-03-04 17:52:44]     "exeErrorCode": 0,
[2026-03-04 17:52:44]     "exeErrorDiag": "",
[2026-03-04 17:52:44]     "pilotErrorCode": 0,
[2026-03-04 17:52:44]     "pilotErrorDiag": "",
[2026-03-04 17:52:44]  *** Listing of results directory ***
[2026-03-04 17:52:44] total 470880
[2026-03-04 17:52:44] -rw-r--r-- 1 boinc boinc    584627 Mar  2 00:56 pilot3.tar.gz
[2026-03-04 17:52:44] -rw-r--r-- 1 boinc boinc      5111 Mar  2 00:57 queuedata.json
[2026-03-04 17:52:44] -rwx------ 1 boinc boinc     36322 Mar  2 00:58 runpilot2-wrapper.sh
[2026-03-04 17:52:44] -rw-r--r-- 1 boinc boinc       100 Mar  4 16:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 17:52:44] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 16:09 run_atlas
[2026-03-04 17:52:44] -rw-r--r-- 1 boinc boinc       105 Mar  4 16:09 job.xml
[2026-03-04 17:52:44] -rw-r--r-- 2 boinc boinc 234210504 Mar  4 16:09 EVNT.48452672._000003.pool.root.1
[2026-03-04 17:52:44] -rw-r--r-- 1 boinc boinc      9590 Mar  4 16:09 init_data.xml
[2026-03-04 17:52:44] drwxrwx--x 2 boinc boinc      4096 Mar  4 16:09 shared
[2026-03-04 17:52:44] -rw-r--r-- 2 boinc boinc    597969 Mar  4 16:09 input.tar.gz
[2026-03-04 17:52:44] -rw-r--r-- 2 boinc boinc     15845 Mar  4 16:09 start_atlas.sh
[2026-03-04 17:52:44] -rw-r--r-- 1 boinc boinc         0 Mar  4 16:09 boinc_lockfile
[2026-03-04 17:52:44] -rw-r--r-- 1 boinc boinc      2631 Mar  4 16:09 pandaJob.out
[2026-03-04 17:52:44] -rw------- 1 boinc boinc    997352 Mar  4 16:09 agis_schedconf.cvmfs.json
[2026-03-04 17:52:44] -rw------- 1 boinc boinc   1516092 Mar  4 16:09 agis_ddmendpoints.agis.ALL.json
[2026-03-04 17:52:44] -rw------- 1 boinc boinc       423 Mar  4 16:09 workernode_map.json
[2026-03-04 17:52:44] drwx------ 5 boinc boinc      4096 Mar  4 16:09 pilot3
[2026-03-04 17:52:44] -rw------- 1 boinc boinc 241408907 Mar  4 17:51 HITS.48844171._000074.pool.root.1
[2026-03-04 17:52:44] -rw-r--r-- 1 boinc boinc       529 Mar  4 17:51 boinc_task_state.xml
[2026-03-04 17:52:44] -rw------- 1 boinc boinc      1012 Mar  4 17:52 memory_monitor_summary.json
[2026-03-04 17:52:44] -rw------- 1 boinc boinc    421672 Mar  4 17:52 log.48844171._000074.job.log.tgz.1
[2026-03-04 17:52:44] -rw------- 1 boinc boinc      6273 Mar  4 17:52 heartbeat.json
[2026-03-04 17:52:44] -rw------- 1 boinc boinc        95 Mar  4 17:52 pilot_heartbeat.json
[2026-03-04 17:52:44] -rw-r--r-- 1 boinc boinc      8192 Mar  4 17:52 boinc_mmap_file
[2026-03-04 17:52:44] -rw-r--r-- 1 boinc boinc        27 Mar  4 17:52 wrapper_checkpoint.txt
[2026-03-04 17:52:44] -rw------- 1 boinc boinc       745 Mar  4 17:52 pilotlog.txt
[2026-03-04 17:52:44] -rw------- 1 boinc boinc    893976 Mar  4 17:52 log.48844171._000074.job.log.1
[2026-03-04 17:52:44] -rw------- 1 boinc boinc       357 Mar  4 17:52 output.list
[2026-03-04 17:52:44] -rw-r--r-- 1 boinc boinc       620 Mar  4 17:52 runtime_log
[2026-03-04 17:52:44] -rw------- 1 boinc boinc   1331200 Mar  4 17:52 result.tar.gz
[2026-03-04 17:52:44] -rw-r--r-- 1 boinc boinc      8910 Mar  4 17:52 runtime_log.err
[2026-03-04 17:52:44] -rw------- 1 boinc boinc       650 Mar  4 17:52 BbMLDmzm6G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm26BLDmxr7pQn.diag
[2026-03-04 17:52:44] -rw-r--r-- 1 boinc boinc     21209 Mar  4 17:52 stderr.txt
[2026-03-04 17:52:44] HITS file was successfully produced:
[2026-03-04 17:52:44] -rw------- 1 boinc boinc 241408907 Mar  4 17:51 shared/HITS.pool.root.1
[2026-03-04 17:52:44]  *** Contents of shared directory: ***
[2026-03-04 17:52:44] total 466384
[2026-03-04 17:52:44] -rw-r--r-- 2 boinc boinc 234210504 Mar  4 16:09 ATLAS.root_0
[2026-03-04 17:52:44] -rw-r--r-- 2 boinc boinc    597969 Mar  4 16:09 input.tar.gz
[2026-03-04 17:52:44] -rw-r--r-- 2 boinc boinc     15845 Mar  4 16:09 start_atlas.sh
[2026-03-04 17:52:44] -rw------- 1 boinc boinc 241408907 Mar  4 17:51 HITS.pool.root.1
[2026-03-04 17:52:44] -rw------- 1 boinc boinc   1331200 Mar  4 17:52 result.tar.gz
17:52:45 (17430): run_atlas exited; CPU time 65438.243015
17:52:45 (17430): called boinc_finish(0)

</stderr_txt>
]]>

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