Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:28:16 (362099): wrapper (7.7.26015): starting
19:28:16 (362099): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 19:28:16] Arguments: --nthreads 4
[2026-03-02 19:28:16] Threads: 4
[2026-03-02 19:28:16] Checking for CVMFS
[2026-03-02 19:28:16] No cvmfs_config command found, will try listing directly
[2026-03-02 19:28:17] CVMFS is ok
[2026-03-02 19:28:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 19:28:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 19:28:17] Further information can be found at the LHC@home message board.
[2026-03-02 19:28:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 19:28:17] Checking for apptainer binary...
[2026-03-02 19:28:17] which: no apptainer in ((null))
[2026-03-02 19:28:17] apptainer is not installed, using version from CVMFS
[2026-03-02 19:28:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 19:28:17] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-03-02 19:28:17] apptainer works
[2026-03-02 19:28:17] Set ATHENA_PROC_NUMBER=4
[2026-03-02 19:28:17] Set ATHENA_CORE_NUMBER=4
[2026-03-02 19:28:17] Starting ATLAS job with PandaID=7035725513
[2026-03-02 19:28:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:35:30 (852257): wrapper (7.7.26015): starting
04:35:30 (852257): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 04:35:30] Arguments: --nthreads 4
[2026-03-03 04:35:30] Threads: 4
[2026-03-03 04:35:30] This job has been restarted, cleaning up previous attempt
[2026-03-03 04:35:30] Checking for CVMFS
[2026-03-03 04:35:30] No cvmfs_config command found, will try listing directly
[2026-03-03 04:35:30] CVMFS is ok
[2026-03-03 04:35:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 04:35:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 04:35:30] Further information can be found at the LHC@home message board.
[2026-03-03 04:35:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 04:35:30] Checking for apptainer binary...
[2026-03-03 04:35:30] which: no apptainer in ((null))
[2026-03-03 04:35:30] apptainer is not installed, using version from CVMFS
[2026-03-03 04:35:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 04:35:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-03-03 04:35:30] apptainer works
[2026-03-03 04:35:30] Set ATHENA_PROC_NUMBER=4
[2026-03-03 04:35:30] Set ATHENA_CORE_NUMBER=4
[2026-03-03 04:35:30] Starting ATLAS job with PandaID=7035725513
[2026-03-03 04:35:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 13:51:49]  *** The last 200 lines of the pilot log: ***
[2026-03-03 13:51:49] 2026-03-03 12:41:45,486 | INFO     | job 7035725513 has state=finished
[2026-03-03 13:51:49] 2026-03-03 12:41:45,486 | INFO     | preparing for final server update for job 7035725513 in state='finished'
[2026-03-03 13:51:49] 2026-03-03 12:41:45,487 | INFO     | reading metadata from: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-7035725513/jobReport.json
[2026-03-03 13:51:49] 2026-03-03 12:41:45,489 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot20/slots/0/workernode_map.json
[2026-03-03 13:51:49] 2026-03-03 12:41:45,489 | INFO     | this job has now completed (state=finished)
[2026-03-03 13:51:49] 2026-03-03 12:41:45,489 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 13:51:49] 2026-03-03 12:41:45,490 | INFO     | log transfer has been attempted: DONE
[2026-03-03 13:51:49] 2026-03-03 12:41:45,490 | INFO     | job 7035725513 has finished - writing final server update
[2026-03-03 13:51:49] 2026-03-03 12:41:45,490 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_848300/.job.ad'
[2026-03-03 13:51:49] 2026-03-03 12:41:45,490 | INFO     | total number of processed events: 400 (read)
[2026-03-03 13:51:49] 2026-03-03 12:41:45,502 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-7035725513/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 13:51:49] 2026-03-03 12:41:45,503 | INFO     | extracted standard info from prmon json
[2026-03-03 13:51:49] 2026-03-03 12:41:45,503 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 13:51:49] 2026-03-03 12:41:45,503 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 13:51:49] 2026-03-03 12:41:45,504 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 13:51:49] 2026-03-03 12:41:45,504 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 13:51:49] 2026-03-03 12:41:45,513 | INFO     | fitting pss+swap vs Time
[2026-03-03 13:51:49] 2026-03-03 12:41:45,514 | INFO     | sum of square deviations: 48017525428.0
[2026-03-03 13:51:49] 2026-03-03 12:41:45,519 | INFO     | sum of deviations: 40896300516.0
[2026-03-03 13:51:49] 2026-03-03 12:41:45,520 | INFO     | mean x: 1772525314.0
[2026-03-03 13:51:49] 2026-03-03 12:41:45,520 | INFO     | mean y: 2329131.389199255
[2026-03-03 13:51:49] 2026-03-03 12:41:45,520 | INFO     | intersect: -1507322339.9731925
[2026-03-03 13:51:49] 2026-03-03 12:41:45,521 | INFO     | chi2: 1.3209951530222461
[2026-03-03 13:51:49] 2026-03-03 12:41:45,521 | INFO     | sum of square deviations: 46688700513.0
[2026-03-03 13:51:49] 2026-03-03 12:41:45,527 | INFO     | sum of deviations: 40358298663.499985
[2026-03-03 13:51:49] 2026-03-03 12:41:45,527 | INFO     | mean x: 1772525161.5
[2026-03-03 13:51:49] 2026-03-03 12:41:45,528 | INFO     | mean y: 2329069.6447368423
[2026-03-03 13:51:49] 2026-03-03 12:41:45,528 | INFO     | intersect: -1529863925.0278616
[2026-03-03 13:51:49] 2026-03-03 12:41:45,528 | INFO     | chi2: 1.321100017907784
[2026-03-03 13:51:49] 2026-03-03 12:41:45,528 | INFO     | current chi2=1.321100017907784 (change=-0.00793832477719868 %)
[2026-03-03 13:51:49] 2026-03-03 12:41:45,529 | INFO     | right removable region: 531
[2026-03-03 13:51:49] 2026-03-03 12:41:45,529 | INFO     | sum of square deviations: 46688700513.0
[2026-03-03 13:51:49] 2026-03-03 12:41:45,535 | INFO     | sum of deviations: -23605544936.499996
[2026-03-03 13:51:49] 2026-03-03 12:41:45,535 | INFO     | mean x: 1772525466.5
[2026-03-03 13:51:49] 2026-03-03 12:41:45,535 | INFO     | mean y: 2336494.3966165413
[2026-03-03 13:51:49] 2026-03-03 12:41:45,536 | INFO     | intersect: 898515421.8633608
[2026-03-03 13:51:49] 2026-03-03 12:41:45,536 | INFO     | chi2: 0.05141456361313581
[2026-03-03 13:51:49] 2026-03-03 12:41:45,536 | INFO     | current chi2=0.05141456361313581 (change=96.10789157738341 %)
[2026-03-03 13:51:49] 2026-03-03 12:41:45,537 | INFO     | sum of square deviations: 45384620248.0
[2026-03-03 13:51:49] 2026-03-03 12:41:45,543 | INFO     | sum of deviations: -19260794651.999996
[2026-03-03 13:51:49] 2026-03-03 12:41:45,543 | INFO     | mean x: 1772525619.0
[2026-03-03 13:51:49] 2026-03-03 12:41:45,543 | INFO     | mean y: 2335983.552182163
[2026-03-03 13:51:49] 2026-03-03 12:41:45,543 | INFO     | intersect: 754578742.8043689
[2026-03-03 13:51:49] 2026-03-03 12:41:45,544 | INFO     | chi2: 0.04592757305843258
[2026-03-03 13:51:49] 2026-03-03 12:41:45,544 | INFO     | current chi2=0.04592757305843258 (change=10.67205509316308 %)
[2026-03-03 13:51:49] 2026-03-03 12:41:45,544 | INFO     | left removable region: 20
[2026-03-03 13:51:49] 2026-03-03 12:41:45,545 | INFO     | sum of square deviations: 41375138560.0
[2026-03-03 13:51:49] 2026-03-03 12:41:45,550 | INFO     | sum of deviations: -6041686561.999988
[2026-03-03 13:51:49] 2026-03-03 12:41:45,550 | INFO     | mean x: 1772525741.0
[2026-03-03 13:51:49] 2026-03-03 12:41:45,550 | INFO     | mean y: 2334369.8962818
[2026-03-03 13:51:49] 2026-03-03 12:41:45,550 | INFO     | intersect: 261162384.08333015
[2026-03-03 13:51:49] 2026-03-03 12:41:45,551 | INFO     | chi2: 0.03177857533652314
[2026-03-03 13:51:49] 2026-03-03 12:41:45,551 | INFO     | current memory leak: -0.15 B/s (using 511 data points, chi2=0.03)
[2026-03-03 13:51:49] 2026-03-03 12:41:45,552 | INFO     | could have reported an average CPU frequency of 2595 MHz (22 samples)
[2026-03-03 13:51:49] 2026-03-03 12:41:45,552 | INFO     | ..............................
[2026-03-03 13:51:49] 2026-03-03 12:41:45,552 | INFO     | . Timing measurements:
[2026-03-03 13:51:49] 2026-03-03 12:41:45,553 | INFO     | . get job = 0 s
[2026-03-03 13:51:49] 2026-03-03 12:41:45,553 | INFO     | . initial setup = 1 s
[2026-03-03 13:51:49] 2026-03-03 12:41:45,553 | INFO     | . payload setup = 6 s
[2026-03-03 13:51:49] 2026-03-03 12:41:45,553 | INFO     | . stage-in = 0 s
[2026-03-03 13:51:49] 2026-03-03 12:41:45,553 | INFO     | . payload execution = 32736 s
[2026-03-03 13:51:49] 2026-03-03 12:41:45,553 | INFO     | . stage-out = 1 s
[2026-03-03 13:51:49] 2026-03-03 12:41:45,553 | INFO     | . log creation = 0 s
[2026-03-03 13:51:49] 2026-03-03 12:41:45,553 | INFO     | ..............................
[2026-03-03 13:51:49] 2026-03-03 12:41:45,650 | INFO     | 
[2026-03-03 13:51:49] 2026-03-03 12:41:45,650 | INFO     | job summary report
[2026-03-03 13:51:49] 2026-03-03 12:41:45,651 | INFO     | --------------------------------------------------
[2026-03-03 13:51:49] 2026-03-03 12:41:45,651 | INFO     | PanDA job id: 7035725513
[2026-03-03 13:51:49] 2026-03-03 12:41:45,651 | INFO     | task id: 48842352
[2026-03-03 13:51:49] 2026-03-03 12:41:45,651 | INFO     | errors: (none)
[2026-03-03 13:51:49] 2026-03-03 12:41:45,651 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 13:51:49] 2026-03-03 12:41:45,651 | INFO     | pilot state: finished 
[2026-03-03 13:51:49] 2026-03-03 12:41:45,651 | INFO     | transexitcode: 0
[2026-03-03 13:51:49] 2026-03-03 12:41:45,651 | INFO     | exeerrorcode: 0
[2026-03-03 13:51:49] 2026-03-03 12:41:45,651 | INFO     | exeerrordiag: 
[2026-03-03 13:51:49] 2026-03-03 12:41:45,651 | INFO     | exitcode: 0
[2026-03-03 13:51:49] 2026-03-03 12:41:45,651 | INFO     | exitmsg: OK
[2026-03-03 13:51:49] 2026-03-03 12:41:45,651 | INFO     | cpuconsumptiontime: 124949 s
[2026-03-03 13:51:49] 2026-03-03 12:41:45,652 | INFO     | nevents: 400
[2026-03-03 13:51:49] 2026-03-03 12:41:45,652 | INFO     | neventsw: 0
[2026-03-03 13:51:49] 2026-03-03 12:41:45,652 | INFO     | pid: 864996
[2026-03-03 13:51:49] 2026-03-03 12:41:45,652 | INFO     | pgrp: 864996
[2026-03-03 13:51:49] 2026-03-03 12:41:45,652 | INFO     | corecount: 4
[2026-03-03 13:51:49] 2026-03-03 12:41:45,652 | INFO     | event service: False
[2026-03-03 13:51:49] 2026-03-03 12:41:45,652 | INFO     | sizes: {0: 2281848, 1: 2282309, 11: 2282309, 32746: 2321930, 32747: 2321929, 32748: 2335804, 32751: 2336182}
[2026-03-03 13:51:49] 2026-03-03 12:41:45,652 | INFO     | --------------------------------------------------
[2026-03-03 13:51:49] 2026-03-03 12:41:45,652 | INFO     | 
[2026-03-03 13:51:49] 2026-03-03 12:41:45,652 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2026-03-03 13:51:49] 2026-03-03 12:41:45,678 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,679 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,679 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,679 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,679 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,679 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,679 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,680 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,680 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,680 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,680 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,680 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,680 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,680 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 13:51:49] 2026-03-03 12:41:45,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,680 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 13:51:49] 2026-03-03 12:41:45,681 | INFO     | job 7035725513 has completed (purged errors)
[2026-03-03 13:51:49] 2026-03-03 12:41:45,681 | INFO     | overall cleanup function is called
[2026-03-03 13:51:49] 2026-03-03 12:41:46,689 | INFO     | --- collectZombieJob: --- 10, [864996]
[2026-03-03 13:51:49] 2026-03-03 12:41:46,689 | INFO     | zombie collector waiting for pid 864996
[2026-03-03 13:51:49] 2026-03-03 12:41:46,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 13:51:49] 2026-03-03 12:41:46,690 | INFO     | collected zombie processes
[2026-03-03 13:51:49] 2026-03-03 12:41:46,690 | INFO     | will attempt to kill all subprocesses of pid=864996
[2026-03-03 13:51:49] 2026-03-03 12:41:47,055 | INFO     | process IDs to be killed: [864996] (in reverse order)
[2026-03-03 13:51:49] 2026-03-03 12:41:47,258 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 13:51:49] 2026-03-03 12:41:47,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 13:51:49] 2026-03-03 12:41:47,269 | INFO     | did not find any defunct processes belonging to 864996
[2026-03-03 13:51:49] 2026-03-03 12:41:47,280 | INFO     | did not find any defunct processes belonging to 864996
[2026-03-03 13:51:49] 2026-03-03 12:41:47,280 | INFO     | ready for new job
[2026-03-03 13:51:49] 2026-03-03 12:41:47,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 13:51:49] 2026-03-03 12:41:47,283 | INFO     | **************************************
[2026-03-03 13:51:49] 2026-03-03 12:41:47,283 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 13:51:49] 2026-03-03 12:41:47,283 | INFO     | **************************************
[2026-03-03 13:51:49] 2026-03-03 12:41:47,284 | INFO     | 
[2026-03-03 13:51:49] 2026-03-03 12:41:47,287 | INFO     | architecture information:
[2026-03-03 13:51:49] 2026-03-03 12:41:47,288 | INFO     | executing command: cat /etc/os-release
[2026-03-03 13:51:49] 2026-03-03 12:41:47,303 | INFO     | cat /etc/os-release:
[2026-03-03 13:51:49] NAME="CentOS Linux"
[2026-03-03 13:51:49] VERSION="7 (Core)"
[2026-03-03 13:51:49] ID="centos"
[2026-03-03 13:51:49] ID_LIKE="rhel fedora"
[2026-03-03 13:51:49] VERSION_ID="7"
[2026-03-03 13:51:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 13:51:49] ANSI_COLOR="0;31"
[2026-03-03 13:51:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 13:51:49] HOME_URL="https://www.centos.org/"
[2026-03-03 13:51:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 13:51:49] 
[2026-03-03 13:51:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 13:51:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 13:51:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 13:51:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 13:51:49] 
[2026-03-03 13:51:49] 2026-03-03 12:41:47,303 | INFO     | **************************************
[2026-03-03 13:51:49] 2026-03-03 12:41:47,806 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2026-03-03 13:51:49] 2026-03-03 12:41:47,825 | INFO     | sufficient remaining disk space (672832421888 B)
[2026-03-03 13:51:49] 2026-03-03 12:41:47,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 13:51:49] 2026-03-03 12:41:47,826 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 13:51:49] 2026-03-03 12:41:47,826 | INFO     | update_server=False
[2026-03-03 13:51:49] 2026-03-03 12:41:47,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 13:51:49] 2026-03-03 12:41:47,826 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 13:51:49] 2026-03-03 12:41:47,826 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 13:51:49] 2026-03-03 12:41:47,827 | INFO     | aborting loop
[2026-03-03 13:51:49] 2026-03-03 12:41:47,828 | INFO     | all data control threads have been joined
[2026-03-03 13:51:49] 2026-03-03 12:41:47,870 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 13:51:49] 2026-03-03 12:41:48,831 | INFO     | [job] retrieve thread has finished
[2026-03-03 13:51:49] 2026-03-03 12:41:48,832 | INFO     | [job] job monitor thread has finished
[2026-03-03 13:51:49] 2026-03-03 12:41:48,833 | INFO     | [data] control thread has finished
[2026-03-03 13:51:49] 2026-03-03 12:41:49,205 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 13:51:49] 2026-03-03 12:41:49,217 | INFO     | all job control threads have been joined
[2026-03-03 13:51:49] 2026-03-03 12:41:49,256 | INFO     | all payload control threads have been joined
[2026-03-03 13:51:49] 2026-03-03 12:41:49,315 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 13:51:49] 2026-03-03 12:41:49,469 | INFO     | [job] validate thread has finished
[2026-03-03 13:51:49] 2026-03-03 12:41:49,568 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 13:51:49] 2026-03-03 12:41:49,875 | INFO     | [data] copytool_out thread has finished
[2026-03-03 13:51:49] 2026-03-03 12:41:50,181 | INFO     | [payload] failed_post thread has finished
[2026-03-03 13:51:49] 2026-03-03 12:41:50,182 | INFO     | [payload] validate_post thread has finished
[2026-03-03 13:51:49] 2026-03-03 12:41:50,222 | INFO     | [job] control thread has finished
[2026-03-03 13:51:49] 2026-03-03 12:41:50,237 | INFO     | [data] copytool_in thread has finished
[2026-03-03 13:51:49] 2026-03-03 12:41:50,262 | INFO     | [payload] control thread has finished
[2026-03-03 13:51:49] 2026-03-03 12:41:50,660 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 13:51:49] 2026-03-03 12:41:51,665 | INFO     | [job] queue monitor thread has finished
[2026-03-03 13:51:49] 2026-03-03 12:41:51,831 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 13:51:49] 2026-03-03 12:41:58,810 | INFO     | job.realtimelogging is not enabled
[2026-03-03 13:51:49] 2026-03-03 12:41:59,815 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 13:51:49] 2026-03-03 12:42:18,178 | INFO     | PID=856479 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-03 13:51:49] 2026-03-03 12:42:18,180 | INFO     | .. there are 12 such processes running
[2026-03-03 13:51:49] 2026-03-03 12:42:18,180 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 13:51:49] 2026-03-03 12:42:18,181 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 13:51:49] 2026-03-03 12:42:18,181 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 13:51:49] 2026-03-03 12:42:37,595 | INFO     | [monitor] cgroup control has ended
[2026-03-03 13:51:49] 2026-03-03 12:42:38,685 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22680467765056)>', '<ExcThread(monitor, started 22680224130816)>']
[2026-03-03 13:51:49] 2026-03-03 12:42:39,282 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 13:51:49] 2026-03-03 12:42:39,282 | INFO     | [monitor] control thread has ended
[2026-03-03 13:51:49] 2026-03-03 12:42:43,710 | INFO     | all workflow threads have been joined
[2026-03-03 13:51:49] 2026-03-03 12:42:43,710 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 13:51:49] 2026-03-03 12:42:43,711 | INFO     | traces error code: 0
[2026-03-03 13:51:49] 2026-03-03 12:42:43,711 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 13:51:49] 2026-03-03 12:42:43,842 [wrapper] ==== pilot stdout END ====
[2026-03-03 13:51:49] 2026-03-03 12:42:43,844 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 13:51:49] 2026-03-03 12:42:43,846 [wrapper] pilotpid: 856479
[2026-03-03 13:51:49] 2026-03-03 12:42:43,848 [wrapper] Pilot exit status: 0
[2026-03-03 13:51:49] 2026-03-03 12:42:43,859 [wrapper] pandaids: 7035725513 7035725513
[2026-03-03 13:51:49] 2026-03-03 12:42:43,930 [wrapper] cleanup supervisor_pilot 1396770 856480
[2026-03-03 13:51:49] 2026-03-03 12:42:43,932 [wrapper] Test setup, not cleaning
[2026-03-03 13:51:49] 2026-03-03 12:42:43,935 [wrapper] apfmon messages muted
[2026-03-03 13:51:49] 2026-03-03 12:42:43,937 [wrapper] ==== wrapper stdout END ====
[2026-03-03 13:51:49] 2026-03-03 12:42:43,939 [wrapper] ==== wrapper stderr END ====
[2026-03-03 13:51:49]  *** Error codes and diagnostics ***
[2026-03-03 13:51:49]     "exeErrorCode": 0,
[2026-03-03 13:51:49]     "exeErrorDiag": "",
[2026-03-03 13:51:49]     "pilotErrorCode": 0,
[2026-03-03 13:51:49]     "pilotErrorDiag": "",
[2026-03-03 13:51:49]  *** Listing of results directory ***
[2026-03-03 13:51:49] total 653648
[2026-03-03 13:51:49] drwx------ 5 boinc boinc      4096 Feb  2 16:00 pilot3
[2026-03-03 13:51:49] -rw-r--r-- 1 boinc boinc    584627 Mar  2 01:56 pilot3.tar.gz
[2026-03-03 13:51:49] -rw-r--r-- 1 boinc boinc      5111 Mar  2 01:57 queuedata.json
[2026-03-03 13:51:49] -rwx------ 1 boinc boinc     36322 Mar  2 01:58 runpilot2-wrapper.sh
[2026-03-03 13:51:49] -rw-r--r-- 1 boinc boinc       100 Mar  2 19:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 13:51:49] -rwxr-xr-x 1 boinc boinc      7986 Mar  2 19:28 run_atlas
[2026-03-03 13:51:49] -rw-r--r-- 1 boinc boinc       105 Mar  2 19:28 job.xml
[2026-03-03 13:51:49] -rw-r--r-- 3 boinc boinc 239737314 Mar  2 19:28 EVNT.48447718._000002.pool.root.1
[2026-03-03 13:51:49] -rw-r--r-- 3 boinc boinc 239737314 Mar  2 19:28 ATLAS.root_0
[2026-03-03 13:51:49] -rw-r--r-- 2 boinc boinc     15845 Mar  2 19:28 start_atlas.sh
[2026-03-03 13:51:49] drwxrwx--x 2 boinc boinc      4096 Mar  2 19:28 shared
[2026-03-03 13:51:49] -rw-r--r-- 2 boinc boinc    597960 Mar  2 19:28 input.tar.gz
[2026-03-03 13:51:49] -rw-r--r-- 1 boinc boinc         0 Mar  2 19:28 boinc_lockfile
[2026-03-03 13:51:49] -rw-r--r-- 1 boinc boinc      2598 Mar  3 04:35 pandaJob.out
[2026-03-03 13:51:49] -rw------- 1 boinc boinc    997730 Mar  3 04:35 agis_schedconf.cvmfs.json
[2026-03-03 13:51:49] -rw------- 1 boinc boinc       452 Mar  3 04:35 workernode_map.json
[2026-03-03 13:51:49] -rw-r--r-- 1 boinc boinc      6647 Mar  3 06:29 init_data.xml
[2026-03-03 13:51:49] -rw------- 1 boinc boinc 175515278 Mar  3 13:41 HITS.48842352._000079.pool.root.1
[2026-03-03 13:51:49] -rw-r--r-- 1 boinc boinc       531 Mar  3 13:41 boinc_task_state.xml
[2026-03-03 13:51:49] -rw------- 1 boinc boinc      1031 Mar  3 13:41 memory_monitor_summary.json
[2026-03-03 13:51:49] -rw------- 1 boinc boinc   1516104 Mar  3 13:41 agis_ddmendpoints.agis.ALL.json
[2026-03-03 13:51:49] -rw------- 1 boinc boinc    667555 Mar  3 13:41 log.48842352._000079.job.log.tgz.1
[2026-03-03 13:51:49] -rw------- 1 boinc boinc      6394 Mar  3 13:41 heartbeat.json
[2026-03-03 13:51:49] -rw------- 1 boinc boinc        97 Mar  3 13:42 pilot_heartbeat.json
[2026-03-03 13:51:49] -rw------- 1 boinc boinc      4901 Mar  3 13:42 pilotlog.txt
[2026-03-03 13:51:49] -rw------- 1 boinc boinc   4535851 Mar  3 13:42 log.48842352._000079.job.log.1
[2026-03-03 13:51:49] -rw------- 1 boinc boinc       357 Mar  3 13:42 output.list
[2026-03-03 13:51:49] -rw-r--r-- 1 boinc boinc       620 Mar  3 13:42 runtime_log
[2026-03-03 13:51:49] -rw------- 1 boinc boinc   5222400 Mar  3 13:42 result.tar.gz
[2026-03-03 13:51:49] -rw-r--r-- 1 boinc boinc      9282 Mar  3 13:42 runtime_log.err
[2026-03-03 13:51:49] -rw------- 1 boinc boinc       793 Mar  3 13:42 kRnNDmym6G9n9Rq4apOajLDm4fhM0noT9bVooX4SDm9AALDmyBJe7n.diag
[2026-03-03 13:51:49] -rw-r--r-- 1 boinc boinc        29 Mar  3 13:51 wrapper_checkpoint.txt
[2026-03-03 13:51:49] -rw-r--r-- 1 boinc boinc      8192 Mar  3 13:51 boinc_mmap_file
[2026-03-03 13:51:49] -rw-r--r-- 1 boinc boinc     23021 Mar  3 13:51 stderr.txt
[2026-03-03 13:51:49] HITS file was successfully produced:
[2026-03-03 13:51:49] -rw------- 1 boinc boinc 175515278 Mar  3 13:41 shared/HITS.pool.root.1
[2026-03-03 13:51:49]  *** Contents of shared directory: ***
[2026-03-03 13:51:49] total 411232
[2026-03-03 13:51:49] -rw-r--r-- 3 boinc boinc 239737314 Mar  2 19:28 ATLAS.root_0
[2026-03-03 13:51:49] -rw-r--r-- 2 boinc boinc     15845 Mar  2 19:28 start_atlas.sh
[2026-03-03 13:51:49] -rw-r--r-- 2 boinc boinc    597960 Mar  2 19:28 input.tar.gz
[2026-03-03 13:51:49] -rw------- 1 boinc boinc 175515278 Mar  3 13:41 HITS.pool.root.1
[2026-03-03 13:51:49] -rw------- 1 boinc boinc   5222400 Mar  3 13:42 result.tar.gz
13:51:51 (852257): run_atlas exited; CPU time 126352.832516
13:51:51 (852257): called boinc_finish(0)

</stderr_txt>
]]>

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