Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:27 (3857781): wrapper (7.7.26015): starting
00:04:27 (3857781): wrapper: running run_atlas (--nthreads 12)
[2026-03-02 00:04:27] Arguments: --nthreads 12
[2026-03-02 00:04:27] Threads: 12
[2026-03-02 00:04:27] Checking for CVMFS
[2026-03-02 00:04:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 00:04:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 00:04:27] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 00:04:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 00:04:28] 2.13.3.0 11285 167801 285260 156795 1 575 23253217 32935937 34812 16776704 0 904961123 99.533 1148774295 36605 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-02 00:04:28] CVMFS is ok
[2026-03-02 00:04:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 00:04:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 00:04:28] Further information can be found at the LHC@home message board.
[2026-03-02 00:04:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 00:04:28] Checking for apptainer binary...
[2026-03-02 00:04:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 00:04:28] Running /usr/bin/apptainer --version
[2026-03-02 00:04:28] apptainer version 1.4.5-2.el9
[2026-03-02 00:04:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 00:04:28] c7-3-29.aglt2.org
[2026-03-02 00:04:28] apptainer works
[2026-03-02 00:04:28] Set ATHENA_PROC_NUMBER=12
[2026-03-02 00:04:28] Set ATHENA_CORE_NUMBER=12
[2026-03-02 00:04:28] Starting ATLAS job with PandaID=7035725553
[2026-03-02 00:04:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 06:45:27]  *** The last 200 lines of the pilot log: ***
[2026-03-02 06:45:27] 2026-03-02 11:44:41,963 | INFO     | job 7035725553 has finished - writing final server update
[2026-03-02 06:45:27] 2026-03-02 11:44:41,963 | INFO     | total number of processed events: 400 (read)
[2026-03-02 06:45:27] 2026-03-02 11:44:42,023 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7035725553/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 06:45:27] 2026-03-02 11:44:42,024 | INFO     | extracted standard info from prmon json
[2026-03-02 06:45:27] 2026-03-02 11:44:42,024 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 06:45:27] 2026-03-02 11:44:42,024 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 06:45:27] 2026-03-02 11:44:42,024 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 06:45:27] 2026-03-02 11:44:42,024 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 06:45:27] 2026-03-02 11:44:42,033 | INFO     | fitting pss+swap vs Time
[2026-03-02 06:45:27] 2026-03-02 11:44:42,034 | INFO     | sum of square deviations: 18677962717.507595
[2026-03-02 06:45:27] 2026-03-02 11:44:42,140 | INFO     | sum of deviations: 92718189147.5026
[2026-03-02 06:45:27] 2026-03-02 11:44:42,141 | INFO     | mean x: 1772439920.8443878
[2026-03-02 06:45:27] 2026-03-02 11:44:42,141 | INFO     | mean y: 2670138.6147959186
[2026-03-02 06:45:27] 2026-03-02 11:44:42,141 | INFO     | intersect: -8795795856.790287
[2026-03-02 06:45:27] 2026-03-02 11:44:42,157 | INFO     | chi2: 4.4705947947981395
[2026-03-02 06:45:27] 2026-03-02 11:44:42,158 | INFO     | sum of square deviations: 17972353451.906918
[2026-03-02 06:45:27] 2026-03-02 11:44:42,161 | INFO     | sum of deviations: 171890320806.69778
[2026-03-02 06:45:27] 2026-03-02 11:44:42,250 | INFO     | mean x: 1772439768.3488371
[2026-03-02 06:45:27] 2026-03-02 11:44:42,250 | INFO     | mean y: 2687158.88372093
[2026-03-02 06:45:27] 2026-03-02 11:44:42,250 | INFO     | intersect: -16949196255.122076
[2026-03-02 06:45:27] 2026-03-02 11:44:42,251 | INFO     | chi2: 2.325524095582703
[2026-03-02 06:45:27] 2026-03-02 11:44:42,251 | INFO     | current chi2=2.325524095582703 (change=47.9817741860967 %)
[2026-03-02 06:45:27] 2026-03-02 11:44:42,251 | INFO     | sum of square deviations: 17284744523.790497
[2026-03-02 06:45:27] 2026-03-02 11:44:42,270 | INFO     | sum of deviations: 168838022951.42923
[2026-03-02 06:45:27] 2026-03-02 11:44:42,271 | INFO     | mean x: 1772439615.853403
[2026-03-02 06:45:27] 2026-03-02 11:44:42,271 | INFO     | mean y: 2686481.90052356
[2026-03-02 06:45:27] 2026-03-02 11:44:42,271 | INFO     | intersect: -17310569153.992058
[2026-03-02 06:45:27] 2026-03-02 11:44:42,271 | INFO     | chi2: 2.3254180336229777
[2026-03-02 06:45:27] 2026-03-02 11:44:42,271 | INFO     | current chi2=2.3254180336229777 (change=0.004560776640694925 %)
[2026-03-02 06:45:27] 2026-03-02 11:44:42,271 | INFO     | right removable region: 381
[2026-03-02 06:45:27] 2026-03-02 11:44:42,272 | INFO     | sum of square deviations: 17972271101.906914
[2026-03-02 06:45:27] 2026-03-02 11:44:42,320 | INFO     | sum of deviations: -866613711.7208748
[2026-03-02 06:45:27] 2026-03-02 11:44:42,320 | INFO     | mean x: 1772440073.3488371
[2026-03-02 06:45:27] 2026-03-02 11:44:42,320 | INFO     | mean y: 2690287.842377261
[2026-03-02 06:45:27] 2026-03-02 11:44:42,320 | INFO     | intersect: 88156440.78754838
[2026-03-02 06:45:27] 2026-03-02 11:44:42,321 | INFO     | chi2: 2.2866985603030234
[2026-03-02 06:45:27] 2026-03-02 11:44:42,321 | INFO     | current chi2=2.2866985603030234 (change=48.85023883256513 %)
[2026-03-02 06:45:27] 2026-03-02 11:44:42,321 | INFO     | sum of square deviations: 17284579823.790497
[2026-03-02 06:45:27] 2026-03-02 11:44:42,367 | INFO     | sum of deviations: -21413961585.308914
[2026-03-02 06:45:27] 2026-03-02 11:44:42,367 | INFO     | mean x: 1772440225.853403
[2026-03-02 06:45:27] 2026-03-02 11:44:42,367 | INFO     | mean y: 2694839.0837696334
[2026-03-02 06:45:27] 2026-03-02 11:44:42,368 | INFO     | intersect: 2198580842.4241467
[2026-03-02 06:45:27] 2026-03-02 11:44:42,368 | INFO     | chi2: 2.1967674384681435
[2026-03-02 06:45:27] 2026-03-02 11:44:42,368 | INFO     | current chi2=2.1967674384681435 (change=3.9327930404155524 %)
[2026-03-02 06:45:27] 2026-03-02 11:44:42,368 | INFO     | left removable region: 20
[2026-03-02 06:45:27] 2026-03-02 11:44:42,368 | INFO     | sum of square deviations: 14587930212.614935
[2026-03-02 06:45:27] 2026-03-02 11:44:42,438 | INFO     | sum of deviations: 43477678840.93076
[2026-03-02 06:45:27] 2026-03-02 11:44:42,439 | INFO     | mean x: 1772440195.3545706
[2026-03-02 06:45:27] 2026-03-02 11:44:42,439 | INFO     | mean y: 2715125.617728532
[2026-03-02 06:45:27] 2026-03-02 11:44:42,439 | INFO     | intersect: -5279842746.214115
[2026-03-02 06:45:27] 2026-03-02 11:44:42,439 | INFO     | chi2: 0.00392793256034379
[2026-03-02 06:45:27] 2026-03-02 11:44:42,439 | INFO     | current memory leak: 2.98 B/s (using 361 data points, chi2=0.00)
[2026-03-02 06:45:27] 2026-03-02 11:44:42,440 | INFO     | could have reported an average CPU frequency of 3220 MHz (17 samples)
[2026-03-02 06:45:27] 2026-03-02 11:44:42,440 | INFO     | ..............................
[2026-03-02 06:45:27] 2026-03-02 11:44:42,440 | INFO     | . Timing measurements:
[2026-03-02 06:45:27] 2026-03-02 11:44:42,440 | INFO     | . get job = 0 s
[2026-03-02 06:45:27] 2026-03-02 11:44:42,440 | INFO     | . initial setup = 28 s
[2026-03-02 06:45:27] 2026-03-02 11:44:42,440 | INFO     | . payload setup = 32 s
[2026-03-02 06:45:27] 2026-03-02 11:44:42,440 | INFO     | . stage-in = 0 s
[2026-03-02 06:45:27] 2026-03-02 11:44:42,440 | INFO     | . payload execution = 23883 s
[2026-03-02 06:45:27] 2026-03-02 11:44:42,440 | INFO     | . stage-out = 4 s
[2026-03-02 06:45:27] 2026-03-02 11:44:42,440 | INFO     | . log creation = 0 s
[2026-03-02 06:45:27] 2026-03-02 11:44:42,440 | INFO     | ..............................
[2026-03-02 06:45:27] 2026-03-02 11:44:43,413 | INFO     | 
[2026-03-02 06:45:27] 2026-03-02 11:44:43,413 | INFO     | job summary report
[2026-03-02 06:45:27] 2026-03-02 11:44:43,413 | INFO     | --------------------------------------------------
[2026-03-02 06:45:27] 2026-03-02 11:44:43,413 | INFO     | PanDA job id: 7035725553
[2026-03-02 06:45:27] 2026-03-02 11:44:43,413 | INFO     | task id: 48842841
[2026-03-02 06:45:27] 2026-03-02 11:44:43,413 | INFO     | errors: (none)
[2026-03-02 06:45:27] 2026-03-02 11:44:43,414 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 06:45:27] 2026-03-02 11:44:43,414 | INFO     | pilot state: finished 
[2026-03-02 06:45:27] 2026-03-02 11:44:43,414 | INFO     | transexitcode: 0
[2026-03-02 06:45:27] 2026-03-02 11:44:43,414 | INFO     | exeerrorcode: 0
[2026-03-02 06:45:27] 2026-03-02 11:44:43,414 | INFO     | exeerrordiag: 
[2026-03-02 06:45:27] 2026-03-02 11:44:43,414 | INFO     | exitcode: 0
[2026-03-02 06:45:27] 2026-03-02 11:44:43,414 | INFO     | exitmsg: OK
[2026-03-02 06:45:27] 2026-03-02 11:44:43,414 | INFO     | cpuconsumptiontime: 81811 s
[2026-03-02 06:45:27] 2026-03-02 11:44:43,414 | INFO     | nevents: 400
[2026-03-02 06:45:27] 2026-03-02 11:44:43,414 | INFO     | neventsw: 0
[2026-03-02 06:45:27] 2026-03-02 11:44:43,414 | INFO     | pid: 3870740
[2026-03-02 06:45:27] 2026-03-02 11:44:43,414 | INFO     | pgrp: 3870740
[2026-03-02 06:45:27] 2026-03-02 11:44:43,414 | INFO     | corecount: 12
[2026-03-02 06:45:27] 2026-03-02 11:44:43,414 | INFO     | event service: False
[2026-03-02 06:45:27] 2026-03-02 11:44:43,415 | INFO     | sizes: {0: 2281141, 1: 2281826, 2: 2282287, 13: 2282287, 23920: 2316887, 23927: 2325885, 23932: 2326069, 23935: 2326327}
[2026-03-02 06:45:27] 2026-03-02 11:44:43,415 | INFO     | --------------------------------------------------
[2026-03-02 06:45:27] 2026-03-02 11:44:43,415 | INFO     | 
[2026-03-02 06:45:27] 2026-03-02 11:44:43,415 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-02 06:45:27] 2026-03-02 11:44:43,463 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,463 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,463 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,463 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,463 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,463 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,463 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,464 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,464 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,465 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 06:45:27] 2026-03-02 11:44:43,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,465 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 06:45:27] 2026-03-02 11:44:43,465 | INFO     | job 7035725553 has completed (purged errors)
[2026-03-02 06:45:27] 2026-03-02 11:44:43,465 | INFO     | overall cleanup function is called
[2026-03-02 06:45:27] 2026-03-02 11:44:43,771 | INFO     | PID=3861697 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-02 06:45:27] 2026-03-02 11:44:43,771 | INFO     | .. there are 46 such processes running
[2026-03-02 06:45:27] 2026-03-02 11:44:44,474 | INFO     | --- collectZombieJob: --- 10, [3870740]
[2026-03-02 06:45:27] 2026-03-02 11:44:44,474 | INFO     | zombie collector waiting for pid 3870740
[2026-03-02 06:45:27] 2026-03-02 11:44:44,474 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 06:45:27] 2026-03-02 11:44:44,475 | INFO     | collected zombie processes
[2026-03-02 06:45:27] 2026-03-02 11:44:44,475 | INFO     | will attempt to kill all subprocesses of pid=3870740
[2026-03-02 06:45:27] 2026-03-02 11:44:49,537 | INFO     | process IDs to be killed: [3870740] (in reverse order)
[2026-03-02 06:45:27] 2026-03-02 11:44:49,818 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 06:45:27] 2026-03-02 11:44:49,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 06:45:27] 2026-03-02 11:44:49,869 | INFO     | did not find any defunct processes belonging to 3870740
[2026-03-02 06:45:27] 2026-03-02 11:44:49,961 | INFO     | did not find any defunct processes belonging to 3870740
[2026-03-02 06:45:27] 2026-03-02 11:44:49,973 | INFO     | ready for new job
[2026-03-02 06:45:27] 2026-03-02 11:44:49,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 06:45:27] 2026-03-02 11:44:49,976 | INFO     | **************************************
[2026-03-02 06:45:27] 2026-03-02 11:44:49,976 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 06:45:27] 2026-03-02 11:44:49,976 | INFO     | **************************************
[2026-03-02 06:45:27] 2026-03-02 11:44:49,976 | INFO     | 
[2026-03-02 06:45:27] 2026-03-02 11:44:49,994 | INFO     | architecture information:
[2026-03-02 06:45:27] 2026-03-02 11:44:50,004 | INFO     | executing command: cat /etc/os-release
[2026-03-02 06:45:27] 2026-03-02 11:44:50,056 | INFO     | cat /etc/os-release:
[2026-03-02 06:45:27] NAME="CentOS Linux"
[2026-03-02 06:45:27] VERSION="7 (Core)"
[2026-03-02 06:45:27] ID="centos"
[2026-03-02 06:45:27] ID_LIKE="rhel fedora"
[2026-03-02 06:45:27] VERSION_ID="7"
[2026-03-02 06:45:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 06:45:27] ANSI_COLOR="0;31"
[2026-03-02 06:45:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 06:45:27] HOME_URL="https://www.centos.org/"
[2026-03-02 06:45:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 06:45:27] 
[2026-03-02 06:45:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 06:45:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 06:45:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 06:45:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 06:45:27] 
[2026-03-02 06:45:27] 2026-03-02 11:44:50,057 | INFO     | **************************************
[2026-03-02 06:45:27] 2026-03-02 11:44:50,559 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-02 06:45:27] 2026-03-02 11:44:50,604 | INFO     | sufficient remaining disk space (72373764096 B)
[2026-03-02 06:45:27] 2026-03-02 11:44:50,604 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 06:45:27] 2026-03-02 11:44:50,605 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 06:45:27] 2026-03-02 11:44:50,605 | INFO     | update_server=False
[2026-03-02 06:45:27] 2026-03-02 11:44:50,605 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 06:45:27] 2026-03-02 11:44:50,608 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 06:45:27] 2026-03-02 11:44:50,624 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 06:45:27] 2026-03-02 11:44:50,624 | INFO     | aborting loop
[2026-03-02 06:45:27] 2026-03-02 11:44:50,748 | INFO     | all payload control threads have been joined
[2026-03-02 06:45:27] 2026-03-02 11:44:50,950 | INFO     | all data control threads have been joined
[2026-03-02 06:45:27] 2026-03-02 11:44:51,571 | INFO     | all job control threads have been joined
[2026-03-02 06:45:27] 2026-03-02 11:44:51,595 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 06:45:27] 2026-03-02 11:44:51,612 | INFO     | [job] retrieve thread has finished
[2026-03-02 06:45:27] 2026-03-02 11:44:51,633 | INFO     | [job] job monitor thread has finished
[2026-03-02 06:45:27] 2026-03-02 11:44:51,657 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 06:45:27] 2026-03-02 11:44:51,767 | INFO     | [payload] control thread has finished
[2026-03-02 06:45:27] 2026-03-02 11:44:51,939 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 06:45:27] 2026-03-02 11:44:51,956 | INFO     | [data] control thread has finished
[2026-03-02 06:45:27] 2026-03-02 11:44:52,132 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 06:45:27] 2026-03-02 11:44:52,578 | INFO     | [job] control thread has finished
[2026-03-02 06:45:27] 2026-03-02 11:44:52,601 | INFO     | [data] copytool_in thread has finished
[2026-03-02 06:45:27] 2026-03-02 11:44:52,602 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 06:45:27] 2026-03-02 11:44:52,638 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 06:45:27] 2026-03-02 11:44:52,880 | INFO     | [payload] failed_post thread has finished
[2026-03-02 06:45:27] 2026-03-02 11:44:52,882 | INFO     | [payload] validate_post thread has finished
[2026-03-02 06:45:27] 2026-03-02 11:44:52,934 | INFO     | [job] validate thread has finished
[2026-03-02 06:45:27] 2026-03-02 11:44:53,626 | INFO     | [data] copytool_out thread has finished
[2026-03-02 06:45:27] 2026-03-02 11:44:53,646 | INFO     | [job] queue monitor thread has finished
[2026-03-02 06:45:27] 2026-03-02 11:44:54,618 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 06:45:27] 2026-03-02 11:45:20,827 | INFO     | PID=3861697 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 06:45:27] 2026-03-02 11:45:20,828 | INFO     | .. there are 46 such processes running
[2026-03-02 06:45:27] 2026-03-02 11:45:20,836 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 06:45:27] 2026-03-02 11:45:20,837 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 06:45:27] 2026-03-02 11:45:20,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 06:45:27] 2026-03-02 11:45:20,849 | INFO     | [monitor] cgroup control has ended
[2026-03-02 06:45:27] 2026-03-02 11:45:21,265 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140655229720384)>', '<ExcThread(monitor, started 140654566942464)>']
[2026-03-02 06:45:27] 2026-03-02 11:45:21,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 06:45:27] 2026-03-02 11:45:21,846 | INFO     | [monitor] control thread has ended
[2026-03-02 06:45:27] 2026-03-02 11:45:26,291 | INFO     | all workflow threads have been joined
[2026-03-02 06:45:27] 2026-03-02 11:45:26,291 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 06:45:27] 2026-03-02 11:45:26,292 | INFO     | traces error code: 0
[2026-03-02 06:45:27] 2026-03-02 11:45:26,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 06:45:27] 2026-03-02 11:45:26,600 [wrapper] ==== pilot stdout END ====
[2026-03-02 06:45:27] 2026-03-02 11:45:26,617 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 06:45:27] 2026-03-02 11:45:26,634 [wrapper] pilotpid: 3861697
[2026-03-02 06:45:27] 2026-03-02 11:45:26,663 [wrapper] Pilot exit status: 0
[2026-03-02 06:45:27] 2026-03-02 11:45:26,744 [wrapper] pandaids: 7035725553
[2026-03-02 06:45:27] 2026-03-02 11:45:27,119 [wrapper] cleanup supervisor_pilot 1136085 3861698
[2026-03-02 06:45:27] 2026-03-02 11:45:27,122 [wrapper] Test setup, not cleaning
[2026-03-02 06:45:27] 2026-03-02 11:45:27,125 [wrapper] apfmon messages muted
[2026-03-02 06:45:27] 2026-03-02 11:45:27,127 [wrapper] ==== wrapper stdout END ====
[2026-03-02 06:45:27] 2026-03-02 11:45:27,129 [wrapper] ==== wrapper stderr END ====
[2026-03-02 06:45:27]  *** Error codes and diagnostics ***
[2026-03-02 06:45:27]     "exeErrorCode": 0,
[2026-03-02 06:45:27]     "exeErrorDiag": "",
[2026-03-02 06:45:27]     "pilotErrorCode": 0,
[2026-03-02 06:45:27]     "pilotErrorDiag": "",
[2026-03-02 06:45:27]  *** Listing of results directory ***
[2026-03-02 06:45:27] total 588564
[2026-03-02 06:45:27] -rwx------. 1 boincer umatlas     36322 Mar  1 19:56 runpilot2-wrapper.sh
[2026-03-02 06:45:27] -rw-r--r--. 1 boincer umatlas      5111 Mar  1 19:56 queuedata.json
[2026-03-02 06:45:27] -rw-r--r--. 1 boincer umatlas    584627 Mar  1 19:56 pilot3.tar.gz
[2026-03-02 06:45:27] -rw-r--r--. 1 boincer umatlas       100 Mar  2 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 06:45:27] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  2 00:04 run_atlas
[2026-03-02 06:45:27] -rw-r--r--. 1 boincer umatlas       105 Mar  2 00:04 job.xml
[2026-03-02 06:45:27] -rw-r--r--. 2 boincer umatlas 297317643 Mar  2 00:04 EVNT.48449441._000001.pool.root.1
[2026-03-02 06:45:27] -rw-r--r--. 2 boincer umatlas     15845 Mar  2 00:04 start_atlas.sh
[2026-03-02 06:45:27] drwxrwx--x. 2 boincer umatlas      4096 Mar  2 00:04 shared
[2026-03-02 06:45:27] -rw-r--r--. 2 boincer umatlas    597963 Mar  2 00:04 input.tar.gz
[2026-03-02 06:45:27] -rw-r--r--. 1 boincer umatlas         0 Mar  2 00:04 boinc_lockfile
[2026-03-02 06:45:27] -rw-r--r--. 1 boincer umatlas      2612 Mar  2 00:04 pandaJob.out
[2026-03-02 06:45:27] -rw-------. 1 boincer umatlas        57 Mar  2 00:04 setup.sh.local
[2026-03-02 06:45:27] -rw-------. 1 boincer umatlas    998242 Mar  2 00:05 agis_schedconf.cvmfs.json
[2026-03-02 06:45:27] -rw-------. 1 boincer umatlas       429 Mar  2 00:05 workernode_map.json
[2026-03-02 06:45:27] drwx------. 5 boincer umatlas      4096 Mar  2 00:05 pilot3
[2026-03-02 06:45:27] -rw-------. 1 boincer umatlas 295065479 Mar  2 06:41 HITS.48842841._000077.pool.root.1
[2026-03-02 06:45:27] -rw-r--r--. 1 boincer umatlas       530 Mar  2 06:41 boinc_task_state.xml
[2026-03-02 06:45:27] -rw-------. 1 boincer umatlas      1033 Mar  2 06:44 memory_monitor_summary.json
[2026-03-02 06:45:27] -rw-------. 1 boincer umatlas   1513015 Mar  2 06:44 agis_ddmendpoints.agis.ALL.json
[2026-03-02 06:45:27] -rw-------. 1 boincer umatlas    593187 Mar  2 06:44 log.48842841._000077.job.log.tgz.1
[2026-03-02 06:45:27] -rw-------. 1 boincer umatlas      6307 Mar  2 06:44 heartbeat.json
[2026-03-02 06:45:27] -rw-r--r--. 1 boincer umatlas      6946 Mar  2 06:45 init_data.xml
[2026-03-02 06:45:27] -rw-------. 1 boincer umatlas        95 Mar  2 06:45 pilot_heartbeat.json
[2026-03-02 06:45:27] -rw-r--r--. 1 boincer umatlas      8192 Mar  2 06:45 boinc_mmap_file
[2026-03-02 06:45:27] -rw-------. 1 boincer umatlas      4820 Mar  2 06:45 pilotlog.txt
[2026-03-02 06:45:27] -rw-r--r--. 1 boincer umatlas        28 Mar  2 06:45 wrapper_checkpoint.txt
[2026-03-02 06:45:27] -rw-------. 1 boincer umatlas   2592253 Mar  2 06:45 log.48842841._000077.job.log.1
[2026-03-02 06:45:27] -rw-------. 1 boincer umatlas       357 Mar  2 06:45 output.list
[2026-03-02 06:45:27] -rw-r--r--. 1 boincer umatlas       620 Mar  2 06:45 runtime_log
[2026-03-02 06:45:27] -rw-------. 1 boincer umatlas   3205120 Mar  2 06:45 result.tar.gz
[2026-03-02 06:45:27] -rw-r--r--. 1 boincer umatlas      9339 Mar  2 06:45 runtime_log.err
[2026-03-02 06:45:27] -rw-------. 1 boincer umatlas       656 Mar  2 06:45 FpTKDmgl6G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmY4BLDmemmb3m.diag
[2026-03-02 06:45:27] -rw-r--r--. 1 boincer umatlas     21259 Mar  2 06:45 stderr.txt
[2026-03-02 06:45:27] HITS file was successfully produced:
[2026-03-02 06:45:27] -rw-------. 1 boincer umatlas 295065479 Mar  2 06:41 shared/HITS.pool.root.1
[2026-03-02 06:45:27]  *** Contents of shared directory: ***
[2026-03-02 06:45:27] total 582244
[2026-03-02 06:45:27] -rw-r--r--. 2 boincer umatlas 297317643 Mar  2 00:04 ATLAS.root_0
[2026-03-02 06:45:27] -rw-r--r--. 2 boincer umatlas     15845 Mar  2 00:04 start_atlas.sh
[2026-03-02 06:45:27] -rw-r--r--. 2 boincer umatlas    597963 Mar  2 00:04 input.tar.gz
[2026-03-02 06:45:27] -rw-------. 1 boincer umatlas 295065479 Mar  2 06:41 HITS.pool.root.1
[2026-03-02 06:45:27] -rw-------. 1 boincer umatlas   3205120 Mar  2 06:45 result.tar.gz
06:45:28 (3857781): run_atlas exited; CPU time 82688.532047
06:45:28 (3857781): called boinc_finish(0)

</stderr_txt>
]]>

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