Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:36:58 (2982229): wrapper (7.7.26015): starting
04:36:58 (2982229): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 04:36:58] Arguments: --nthreads 4
[2026-03-03 04:36:58] Threads: 4
[2026-03-03 04:36:58] Checking for CVMFS
[2026-03-03 04:36:58] No cvmfs_config command found, will try listing directly
[2026-03-03 04:36:58] CVMFS is ok
[2026-03-03 04:36:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 04:36:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 04:36:58] Further information can be found at the LHC@home message board.
[2026-03-03 04:36:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 04:36:58] Checking for apptainer binary...
[2026-03-03 04:36:58] which: no apptainer in ((null))
[2026-03-03 04:36:58] apptainer is not installed, using version from CVMFS
[2026-03-03 04:36:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 04:36:59] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot196/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-03 04:36:59] apptainer works
[2026-03-03 04:36:59] Set ATHENA_PROC_NUMBER=4
[2026-03-03 04:36:59] Set ATHENA_CORE_NUMBER=4
[2026-03-03 04:36:59] Starting ATLAS job with PandaID=7035716191
[2026-03-03 04:36:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot196/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 06:12:25]  *** The last 200 lines of the pilot log: ***
[2026-03-03 06:12:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-03 06:12:25]  is_altstaged=None
[2026-03-03 06:12:25]  is_tar=False
[2026-03-03 06:12:25]  lfn=log.48838416._009980.job.log.tgz.1
[2026-03-03 06:12:25]  mtime=0
[2026-03-03 06:12:25]  protocol_id=None
[2026-03-03 06:12:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-03 06:12:25]  replicas=None
[2026-03-03 06:12:25]  scope=mc23_13p6TeV
[2026-03-03 06:12:25]  status=None
[2026-03-03 06:12:25]  status_code=0
[2026-03-03 06:12:25]  storage_token=
[2026-03-03 06:12:25]  surl=/var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7035716191/log.48838416._009980.job.log.tgz.1
[2026-03-03 06:12:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/bb/log.48838416._009980.job.log.tgz.1
[2026-03-03 06:12:25]  workdir=None
[2026-03-03 06:12:25] ]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,282 | INFO     | transferring file log.48838416._009980.job.log.tgz.1 from /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7035716191/log.48838416._009980.job.log.tgz.1 to /var/lib/
[2026-03-03 06:12:25] 2026-03-03 05:11:16,283 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7035716191/log.48838416._009980.job.log.tgz.1 /var/lib/boinc/var/slot196/slots/0/
[2026-03-03 06:12:25] 2026-03-03 05:11:16,299 | INFO     | adding to output.list: log.48838416._009980.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/bb/log.48838416._009980.job.log.tg
[2026-03-03 06:12:25] 2026-03-03 05:11:16,299 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 06:12:25] 2026-03-03 05:11:16,299 | INFO     | summary of transferred files:
[2026-03-03 06:12:25] 2026-03-03 05:11:16,299 | INFO     |  -- lfn=log.48838416._009980.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 06:12:25] 2026-03-03 05:11:16,300 | INFO     | stage-out finished correctly
[2026-03-03 06:12:25] 2026-03-03 05:11:16,353 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 06:12:25] 2026-03-03 05:11:16,719 | INFO     | job 7035716191 has state=finished
[2026-03-03 06:12:25] 2026-03-03 05:11:16,719 | INFO     | preparing for final server update for job 7035716191 in state='finished'
[2026-03-03 06:12:25] 2026-03-03 05:11:16,719 | INFO     | reading metadata from: /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7035716191/jobReport.json
[2026-03-03 06:12:25] 2026-03-03 05:11:16,721 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot196/slots/0/workernode_map.json
[2026-03-03 06:12:25] 2026-03-03 05:11:16,721 | INFO     | this job has now completed (state=finished)
[2026-03-03 06:12:25] 2026-03-03 05:11:16,721 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 06:12:25] 2026-03-03 05:11:16,722 | INFO     | log transfer has been attempted: DONE
[2026-03-03 06:12:25] 2026-03-03 05:11:16,722 | INFO     | job 7035716191 has finished - writing final server update
[2026-03-03 06:12:25] 2026-03-03 05:11:16,722 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_16301/.job.ad'
[2026-03-03 06:12:25] 2026-03-03 05:11:16,722 | INFO     | total number of processed events: 400 (read)
[2026-03-03 06:12:25] 2026-03-03 05:11:16,740 | INFO     | using path: /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7035716191/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 06:12:25] 2026-03-03 05:11:16,740 | INFO     | extracted standard info from prmon json
[2026-03-03 06:12:25] 2026-03-03 05:11:16,741 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 06:12:25] 2026-03-03 05:11:16,741 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 06:12:25] 2026-03-03 05:11:16,741 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 06:12:25] 2026-03-03 05:11:16,741 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 06:12:25] 2026-03-03 05:11:16,742 | INFO     | fitting pss+swap vs Time
[2026-03-03 06:12:25] 2026-03-03 05:11:16,742 | INFO     | sum of square deviations: 197203697.5
[2026-03-03 06:12:25] 2026-03-03 05:11:16,743 | INFO     | sum of deviations: -112661723.5
[2026-03-03 06:12:25] 2026-03-03 05:11:16,743 | INFO     | mean x: 1772511947.5
[2026-03-03 06:12:25] 2026-03-03 05:11:16,743 | INFO     | mean y: 2360609.5465116277
[2026-03-03 06:12:25] 2026-03-03 05:11:16,743 | INFO     | intersect: 1014989954.0327706
[2026-03-03 06:12:25] 2026-03-03 05:11:16,743 | INFO     | chi2: 0.0008940377990473765
[2026-03-03 06:12:25] 2026-03-03 05:11:16,743 | INFO     | current memory leak: -0.57 B/s (using 86 data points, chi2=0.00)
[2026-03-03 06:12:25] 2026-03-03 05:11:16,743 | INFO     | could have reported an average CPU frequency of 3610 MHz (7 samples)
[2026-03-03 06:12:25] 2026-03-03 05:11:16,743 | INFO     | ..............................
[2026-03-03 06:12:25] 2026-03-03 05:11:16,743 | INFO     | . Timing measurements:
[2026-03-03 06:12:25] 2026-03-03 05:11:16,743 | INFO     | . get job = 0 s
[2026-03-03 06:12:25] 2026-03-03 05:11:16,743 | INFO     | . initial setup = 4 s
[2026-03-03 06:12:25] 2026-03-03 05:11:16,743 | INFO     | . payload setup = 4 s
[2026-03-03 06:12:25] 2026-03-03 05:11:16,743 | INFO     | . stage-in = 0 s
[2026-03-03 06:12:25] 2026-03-03 05:11:16,743 | INFO     | . payload execution = 5626 s
[2026-03-03 06:12:25] 2026-03-03 05:11:16,744 | INFO     | . stage-out = 0 s
[2026-03-03 06:12:25] 2026-03-03 05:11:16,744 | INFO     | . log creation = 0 s
[2026-03-03 06:12:25] 2026-03-03 05:11:16,744 | INFO     | ..............................
[2026-03-03 06:12:25] 2026-03-03 05:11:16,794 | INFO     | 
[2026-03-03 06:12:25] 2026-03-03 05:11:16,794 | INFO     | job summary report
[2026-03-03 06:12:25] 2026-03-03 05:11:16,794 | INFO     | --------------------------------------------------
[2026-03-03 06:12:25] 2026-03-03 05:11:16,794 | INFO     | PanDA job id: 7035716191
[2026-03-03 06:12:25] 2026-03-03 05:11:16,794 | INFO     | task id: 48838416
[2026-03-03 06:12:25] 2026-03-03 05:11:16,794 | INFO     | errors: (none)
[2026-03-03 06:12:25] 2026-03-03 05:11:16,794 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 06:12:25] 2026-03-03 05:11:16,794 | INFO     | pilot state: finished 
[2026-03-03 06:12:25] 2026-03-03 05:11:16,794 | INFO     | transexitcode: 0
[2026-03-03 06:12:25] 2026-03-03 05:11:16,794 | INFO     | exeerrorcode: 0
[2026-03-03 06:12:25] 2026-03-03 05:11:16,794 | INFO     | exeerrordiag: 
[2026-03-03 06:12:25] 2026-03-03 05:11:16,794 | INFO     | exitcode: 0
[2026-03-03 06:12:25] 2026-03-03 05:11:16,794 | INFO     | exitmsg: OK
[2026-03-03 06:12:25] 2026-03-03 05:11:16,794 | INFO     | cpuconsumptiontime: 21739 s
[2026-03-03 06:12:25] 2026-03-03 05:11:16,794 | INFO     | nevents: 400
[2026-03-03 06:12:25] 2026-03-03 05:11:16,794 | INFO     | neventsw: 0
[2026-03-03 06:12:25] 2026-03-03 05:11:16,794 | INFO     | pid: 2992574
[2026-03-03 06:12:25] 2026-03-03 05:11:16,795 | INFO     | pgrp: 2992574
[2026-03-03 06:12:25] 2026-03-03 05:11:16,795 | INFO     | corecount: 4
[2026-03-03 06:12:25] 2026-03-03 05:11:16,795 | INFO     | event service: False
[2026-03-03 06:12:25] 2026-03-03 05:11:16,795 | INFO     | sizes: {0: 2282029, 1: 2282291, 11: 2282319, 5634: 2308989, 5635: 2318067, 5636: 2318205}
[2026-03-03 06:12:25] 2026-03-03 05:11:16,795 | INFO     | --------------------------------------------------
[2026-03-03 06:12:25] 2026-03-03 05:11:16,795 | INFO     | 
[2026-03-03 06:12:25] 2026-03-03 05:11:16,795 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot196/slots/0
[2026-03-03 06:12:25] 2026-03-03 05:11:16,811 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,811 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,811 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,811 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,811 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,811 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,811 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,812 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,812 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 06:12:25] 2026-03-03 05:11:16,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,812 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 06:12:25] 2026-03-03 05:11:16,812 | INFO     | job 7035716191 has completed (purged errors)
[2026-03-03 06:12:25] 2026-03-03 05:11:16,812 | INFO     | overall cleanup function is called
[2026-03-03 06:12:25] 2026-03-03 05:11:17,819 | INFO     | --- collectZombieJob: --- 10, [2992574]
[2026-03-03 06:12:25] 2026-03-03 05:11:17,819 | INFO     | zombie collector waiting for pid 2992574
[2026-03-03 06:12:25] 2026-03-03 05:11:17,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 06:12:25] 2026-03-03 05:11:17,819 | INFO     | collected zombie processes
[2026-03-03 06:12:25] 2026-03-03 05:11:17,819 | INFO     | will attempt to kill all subprocesses of pid=2992574
[2026-03-03 06:12:25] 2026-03-03 05:11:18,246 | INFO     | process IDs to be killed: [2992574] (in reverse order)
[2026-03-03 06:12:25] 2026-03-03 05:11:18,440 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 06:12:25] 2026-03-03 05:11:18,440 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 06:12:25] 2026-03-03 05:11:18,466 | INFO     | did not find any defunct processes belonging to 2992574
[2026-03-03 06:12:25] 2026-03-03 05:11:18,491 | INFO     | did not find any defunct processes belonging to 2992574
[2026-03-03 06:12:25] 2026-03-03 05:11:18,492 | INFO     | ready for new job
[2026-03-03 06:12:25] 2026-03-03 05:11:18,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 06:12:25] 2026-03-03 05:11:18,493 | INFO     | **************************************
[2026-03-03 06:12:25] 2026-03-03 05:11:18,493 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 06:12:25] 2026-03-03 05:11:18,493 | INFO     | **************************************
[2026-03-03 06:12:25] 2026-03-03 05:11:18,494 | INFO     | 
[2026-03-03 06:12:25] 2026-03-03 05:11:18,500 | INFO     | architecture information:
[2026-03-03 06:12:25] 2026-03-03 05:11:18,500 | INFO     | executing command: cat /etc/os-release
[2026-03-03 06:12:25] 2026-03-03 05:11:18,513 | INFO     | cat /etc/os-release:
[2026-03-03 06:12:25] NAME="CentOS Linux"
[2026-03-03 06:12:25] VERSION="7 (Core)"
[2026-03-03 06:12:25] ID="centos"
[2026-03-03 06:12:25] ID_LIKE="rhel fedora"
[2026-03-03 06:12:25] VERSION_ID="7"
[2026-03-03 06:12:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 06:12:25] ANSI_COLOR="0;31"
[2026-03-03 06:12:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 06:12:25] HOME_URL="https://www.centos.org/"
[2026-03-03 06:12:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 06:12:25] 
[2026-03-03 06:12:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 06:12:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 06:12:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 06:12:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 06:12:25] 
[2026-03-03 06:12:25] 2026-03-03 05:11:18,514 | INFO     | **************************************
[2026-03-03 06:12:25] 2026-03-03 05:11:19,016 | INFO     | executing command: df -mP /var/lib/boinc/var/slot196/slots/0
[2026-03-03 06:12:25] 2026-03-03 05:11:19,028 | INFO     | sufficient remaining disk space (22038970368 B)
[2026-03-03 06:12:25] 2026-03-03 05:11:19,028 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 06:12:25] 2026-03-03 05:11:19,028 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 06:12:25] 2026-03-03 05:11:19,028 | INFO     | update_server=False
[2026-03-03 06:12:25] 2026-03-03 05:11:19,028 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 06:12:25] 2026-03-03 05:11:19,358 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 06:12:25] 2026-03-03 05:11:19,550 | WARNING  | process 2992574 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 06:12:25] 2026-03-03 05:11:19,599 | INFO     | all job control threads have been joined
[2026-03-03 06:12:25] 2026-03-03 05:11:19,899 | INFO     | using path: /var/lib/boinc/var/slot196/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 06:12:25] 2026-03-03 05:11:20,034 | INFO     | [job] retrieve thread has finished
[2026-03-03 06:12:25] 2026-03-03 05:11:20,073 | INFO     | [job] validate thread has finished
[2026-03-03 06:12:25] 2026-03-03 05:11:20,128 | INFO     | all data control threads have been joined
[2026-03-03 06:12:25] 2026-03-03 05:11:20,246 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 06:12:25] 2026-03-03 05:11:20,287 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 06:12:25] 2026-03-03 05:11:20,335 | INFO     | number of running child processes to parent process 2992574: 1
[2026-03-03 06:12:25] 2026-03-03 05:11:20,335 | INFO     | maximum number of monitored processes: 6
[2026-03-03 06:12:25] 2026-03-03 05:11:20,335 | INFO     | aborting job monitoring since job object (job id=7035716191) has expired
[2026-03-03 06:12:25] 2026-03-03 05:11:20,335 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 06:12:25] 2026-03-03 05:11:20,335 | INFO     | will abort loop
[2026-03-03 06:12:25] 2026-03-03 05:11:20,519 | INFO     | [data] copytool_in thread has finished
[2026-03-03 06:12:25] 2026-03-03 05:11:20,559 | INFO     | all payload control threads have been joined
[2026-03-03 06:12:25] 2026-03-03 05:11:20,604 | INFO     | [job] control thread has finished
[2026-03-03 06:12:25] 2026-03-03 05:11:21,095 | INFO     | [payload] failed_post thread has finished
[2026-03-03 06:12:25] 2026-03-03 05:11:21,134 | INFO     | [data] control thread has finished
[2026-03-03 06:12:25] 2026-03-03 05:11:21,135 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 06:12:25] 2026-03-03 05:11:21,340 | INFO     | [job] job monitor thread has finished
[2026-03-03 06:12:25] 2026-03-03 05:11:21,364 | INFO     | [data] copytool_out thread has finished
[2026-03-03 06:12:25] 2026-03-03 05:11:21,565 | INFO     | [payload] control thread has finished
[2026-03-03 06:12:25] 2026-03-03 05:11:21,593 | INFO     | [payload] validate_post thread has finished
[2026-03-03 06:12:25] 2026-03-03 05:11:21,805 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 06:12:25] 2026-03-03 05:11:22,070 | INFO     | job.realtimelogging is not enabled
[2026-03-03 06:12:25] 2026-03-03 05:11:22,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 06:12:25] 2026-03-03 05:11:22,810 | INFO     | [job] queue monitor thread has finished
[2026-03-03 06:12:25] 2026-03-03 05:11:23,075 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 06:12:25] 2026-03-03 05:11:26,414 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 06:12:25] 2026-03-03 05:11:48,740 | INFO     | PID=2986824 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 06:12:25] 2026-03-03 05:11:48,740 | INFO     | .. there are 45 such processes running
[2026-03-03 06:12:25] 2026-03-03 05:11:48,740 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 06:12:25] 2026-03-03 05:11:48,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 06:12:25] 2026-03-03 05:11:48,741 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 06:12:25] 2026-03-03 05:12:18,780 | INFO     | [monitor] cgroup control has ended
[2026-03-03 06:12:25] 2026-03-03 05:12:20,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23118813656896)>', '<ExcThread(monitor, started 23118572955392)>']
[2026-03-03 06:12:25] 2026-03-03 05:12:20,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 06:12:25] 2026-03-03 05:12:20,892 | INFO     | [monitor] control thread has ended
[2026-03-03 06:12:25] 2026-03-03 05:12:25,081 | INFO     | all workflow threads have been joined
[2026-03-03 06:12:25] 2026-03-03 05:12:25,081 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 06:12:25] 2026-03-03 05:12:25,081 | INFO     | traces error code: 0
[2026-03-03 06:12:25] 2026-03-03 05:12:25,081 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 06:12:25] 2026-03-03 05:12:25,257 [wrapper] ==== pilot stdout END ====
[2026-03-03 06:12:25] 2026-03-03 05:12:25,260 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 06:12:25] 2026-03-03 05:12:25,262 [wrapper] pilotpid: 2986824
[2026-03-03 06:12:25] 2026-03-03 05:12:25,265 [wrapper] Pilot exit status: 0
[2026-03-03 06:12:25] 2026-03-03 05:12:25,273 [wrapper] pandaids: 7035716191
[2026-03-03 06:12:25] 2026-03-03 05:12:25,394 [wrapper] cleanup supervisor_pilot 3621286 2986825
[2026-03-03 06:12:25] 2026-03-03 05:12:25,397 [wrapper] Test setup, not cleaning
[2026-03-03 06:12:25] 2026-03-03 05:12:25,399 [wrapper] apfmon messages muted
[2026-03-03 06:12:25] 2026-03-03 05:12:25,401 [wrapper] ==== wrapper stdout END ====
[2026-03-03 06:12:25] 2026-03-03 05:12:25,403 [wrapper] ==== wrapper stderr END ====
[2026-03-03 06:12:25]  *** Error codes and diagnostics ***
[2026-03-03 06:12:25]     "exeErrorCode": 0,
[2026-03-03 06:12:25]     "exeErrorDiag": "",
[2026-03-03 06:12:25]     "pilotErrorCode": 0,
[2026-03-03 06:12:25]     "pilotErrorDiag": "",
[2026-03-03 06:12:25]  *** Listing of results directory ***
[2026-03-03 06:12:25] total 512472
[2026-03-03 06:12:25] -rw-r--r--. 1 boinc boinc    584627 Mar  2 00:37 pilot3.tar.gz
[2026-03-03 06:12:25] -rwx------. 1 boinc boinc     36322 Mar  2 00:40 runpilot2-wrapper.sh
[2026-03-03 06:12:25] -rw-r--r--. 1 boinc boinc      5111 Mar  2 00:41 queuedata.json
[2026-03-03 06:12:25] -rw-r--r--. 1 boinc boinc       100 Mar  3 04:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 06:12:25] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 04:36 run_atlas
[2026-03-03 06:12:25] -rw-r--r--. 1 boinc boinc       105 Mar  3 04:36 job.xml
[2026-03-03 06:12:25] -rw-r--r--. 2 boinc boinc    597964 Mar  3 04:36 input.tar.gz
[2026-03-03 06:12:25] -rw-r--r--. 1 boinc boinc      6705 Mar  3 04:36 init_data.xml
[2026-03-03 06:12:25] -rw-r--r--. 2 boinc boinc 290829829 Mar  3 04:36 EVNT.48220085._000389.pool.root.1
[2026-03-03 06:12:25] -rw-r--r--. 2 boinc boinc     15845 Mar  3 04:36 start_atlas.sh
[2026-03-03 06:12:25] drwxrwx--x. 2 boinc boinc      4096 Mar  3 04:36 shared
[2026-03-03 06:12:25] -rw-r--r--. 1 boinc boinc         0 Mar  3 04:36 boinc_lockfile
[2026-03-03 06:12:25] -rw-r--r--. 1 boinc boinc      2567 Mar  3 04:36 pandaJob.out
[2026-03-03 06:12:25] -rw-------. 1 boinc boinc    997730 Mar  3 04:37 agis_schedconf.cvmfs.json
[2026-03-03 06:12:25] -rw-------. 1 boinc boinc   1512931 Mar  3 04:37 agis_ddmendpoints.agis.ALL.json
[2026-03-03 06:12:25] -rw-------. 1 boinc boinc       445 Mar  3 04:37 workernode_map.json
[2026-03-03 06:12:25] drwx------. 5 boinc boinc      4096 Mar  3 04:37 pilot3
[2026-03-03 06:12:25] -rw-------. 1 boinc boinc 227831079 Mar  3 06:10 HITS.48838416._009980.pool.root.1
[2026-03-03 06:12:25] -rw-------. 1 boinc boinc        95 Mar  3 06:11 pilot_heartbeat.json
[2026-03-03 06:12:25] -rw-r--r--. 1 boinc boinc       529 Mar  3 06:11 boinc_task_state.xml
[2026-03-03 06:12:25] -rw-------. 1 boinc boinc      1043 Mar  3 06:11 memory_monitor_summary.json
[2026-03-03 06:12:25] -rw-------. 1 boinc boinc    270441 Mar  3 06:11 log.48838416._009980.job.log.tgz.1
[2026-03-03 06:12:25] -rw-------. 1 boinc boinc      6352 Mar  3 06:11 heartbeat.json
[2026-03-03 06:12:25] -rw-r--r--. 1 boinc boinc      8192 Mar  3 06:12 boinc_mmap_file
[2026-03-03 06:12:25] -rw-r--r--. 1 boinc boinc        27 Mar  3 06:12 wrapper_checkpoint.txt
[2026-03-03 06:12:25] -rw-------. 1 boinc boinc      5435 Mar  3 06:12 pilotlog.txt
[2026-03-03 06:12:25] -rw-------. 1 boinc boinc    822776 Mar  3 06:12 log.48838416._009980.job.log.1
[2026-03-03 06:12:25] -rw-------. 1 boinc boinc       357 Mar  3 06:12 output.list
[2026-03-03 06:12:25] -rw-r--r--. 1 boinc boinc       620 Mar  3 06:12 runtime_log
[2026-03-03 06:12:25] -rw-------. 1 boinc boinc   1105920 Mar  3 06:12 result.tar.gz
[2026-03-03 06:12:25] -rw-r--r--. 1 boinc boinc      9221 Mar  3 06:12 runtime_log.err
[2026-03-03 06:12:25] -rw-------. 1 boinc boinc       662 Mar  3 06:12 IdxMDmdZ5G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmC1BLDmRM3MPo.diag
[2026-03-03 06:12:25] -rw-r--r--. 1 boinc boinc     21311 Mar  3 06:12 stderr.txt
[2026-03-03 06:12:25] HITS file was successfully produced:
[2026-03-03 06:12:25] -rw-------. 1 boinc boinc 227831079 Mar  3 06:10 shared/HITS.pool.root.1
[2026-03-03 06:12:25]  *** Contents of shared directory: ***
[2026-03-03 06:12:25] total 508196
[2026-03-03 06:12:25] -rw-r--r--. 2 boinc boinc    597964 Mar  3 04:36 input.tar.gz
[2026-03-03 06:12:25] -rw-r--r--. 2 boinc boinc 290829829 Mar  3 04:36 ATLAS.root_0
[2026-03-03 06:12:25] -rw-r--r--. 2 boinc boinc     15845 Mar  3 04:36 start_atlas.sh
[2026-03-03 06:12:25] -rw-------. 1 boinc boinc 227831079 Mar  3 06:10 HITS.pool.root.1
[2026-03-03 06:12:25] -rw-------. 1 boinc boinc   1105920 Mar  3 06:12 result.tar.gz
06:12:27 (2982229): run_atlas exited; CPU time 21972.238933
06:12:27 (2982229): called boinc_finish(0)

</stderr_txt>
]]>

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