Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:10:05 (508981): wrapper (7.7.26015): starting
00:10:05 (508981): wrapper: running run_atlas (--nthreads 3)
[2026-03-03 00:10:05] Arguments: --nthreads 3
[2026-03-03 00:10:05] Threads: 3
[2026-03-03 00:10:05] Checking for CVMFS
[2026-03-03 00:10:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 00:10:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 00:10:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 00:10:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 00:10:07] 2.9.2.0 509179 0 29148 156824 3 1 24054714 36864000 0 130560 0 0 0.000 1336 58086 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-03 00:10:07] CVMFS is ok
[2026-03-03 00:10:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 00:10:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 00:10:07] Further information can be found at the LHC@home message board.
[2026-03-03 00:10:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 00:10:07] Checking for apptainer binary...
[2026-03-03 00:10:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 00:10:07] Running /usr/bin/apptainer --version
[2026-03-03 00:10:07] apptainer version 1.4.1-1.1
[2026-03-03 00:10:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 00:10:07] atlasA215
[2026-03-03 00:10:07] apptainer works
[2026-03-03 00:10:07] Set ATHENA_PROC_NUMBER=3
[2026-03-03 00:10:07] Set ATHENA_CORE_NUMBER=3
[2026-03-03 00:10:07] Starting ATLAS job with PandaID=7035669370
[2026-03-03 00:10:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 02:13:33]  *** The last 200 lines of the pilot log: ***
[2026-03-03 02:13:33] 2026-03-03 01:13:20,081 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 02:13:33] 2026-03-03 01:13:20,081 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 02:13:33] 2026-03-03 01:13:20,656 | INFO     | all payload control threads have been joined
[2026-03-03 02:13:33] 2026-03-03 01:13:20,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 02:13:33] 2026-03-03 01:13:20,874 | INFO     | aborting loop
[2026-03-03 02:13:33] 2026-03-03 01:13:20,949 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 02:13:33] 2026-03-03 01:13:20,958 | INFO     | all data control threads have been joined
[2026-03-03 02:13:33] 2026-03-03 01:13:21,086 | INFO     | [job] retrieve thread has finished
[2026-03-03 02:13:33] 2026-03-03 01:13:21,086 | INFO     | [job] queue monitor thread has finished
[2026-03-03 02:13:33] 2026-03-03 01:13:21,117 | INFO     | [payload] failed_post thread has finished
[2026-03-03 02:13:33] 2026-03-03 01:13:21,608 | INFO     | [job] validate thread has finished
[2026-03-03 02:13:33] 2026-03-03 01:13:21,662 | INFO     | [payload] control thread has finished
[2026-03-03 02:13:33] 2026-03-03 01:13:21,679 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 02:13:33] 2026-03-03 01:13:21,679 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 02:13:33] 2026-03-03 01:13:21,781 | INFO     | all job control threads have been joined
[2026-03-03 02:13:33] 2026-03-03 01:13:21,879 | INFO     | [job] job monitor thread has finished
[2026-03-03 02:13:33] 2026-03-03 01:13:21,910 | INFO     | [data] copytool_in thread has finished
[2026-03-03 02:13:33] 2026-03-03 01:13:21,964 | INFO     | [data] control thread has finished
[2026-03-03 02:13:33] 2026-03-03 01:13:22,031 | INFO     | job.realtimelogging is not enabled
[2026-03-03 02:13:33] 2026-03-03 01:13:22,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 02:13:33] 2026-03-03 01:13:22,116 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 02:13:33] 2026-03-03 01:13:22,546 | INFO     | [payload] validate_post thread has finished
[2026-03-03 02:13:33] 2026-03-03 01:13:22,787 | INFO     | [job] control thread has finished
[2026-03-03 02:13:33] 2026-03-03 01:13:22,955 | INFO     | [data] copytool_out thread has finished
[2026-03-03 02:13:33] 2026-03-03 01:13:23,037 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 02:13:33] 2026-03-03 01:13:26,089 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 02:13:33] 2026-03-03 01:13:26,613 | INFO     | [monitor] cgroup control has ended
[2026-03-03 02:13:33] 2026-03-03 01:13:28,523 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140456878053184)>', '<ExcThread(monitor, started 140456167995136)>']
[2026-03-03 02:13:33] 2026-03-03 01:13:29,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 02:13:33] 2026-03-03 01:13:29,126 | INFO     | [monitor] control thread has ended
[2026-03-03 02:13:33] 2026-03-03 01:13:33,549 | INFO     | all workflow threads have been joined
[2026-03-03 02:13:33] 2026-03-03 01:13:33,549 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 02:13:33] 2026-03-03 01:13:33,549 | INFO     | traces error code: 0
[2026-03-03 02:13:33] 2026-03-03 01:13:33,549 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 02:13:33] 2026-03-03 01:13:33,601 [wrapper] ==== pilot stdout END ====
[2026-03-03 02:13:33] 2026-03-03 01:13:33,603 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 02:13:33] 2026-03-03 01:13:33,606 [wrapper] pilotpid: 513266
[2026-03-03 02:13:33] 2026-03-03 01:13:33,608 [wrapper] Pilot exit status: 0
[2026-03-03 02:13:33] 2026-03-03 01:13:33,616 [wrapper] pandaids: 7035669370
[2026-03-03 02:13:33] 2026-03-03 01:13:33,635 [wrapper] cleanup supervisor_pilot  523748 513267
[2026-03-03 02:13:33] 2026-03-03 01:13:33,638 [wrapper] Test setup, not cleaning
[2026-03-03 02:13:33] 2026-03-03 01:13:33,641 [wrapper] apfmon messages muted
[2026-03-03 02:13:33] 2026-03-03 01:13:33,643 [wrapper] ==== wrapper stdout END ====
[2026-03-03 02:13:33] 2026-03-03 01:13:33,646 [wrapper] ==== wrapper stderr END ====
[2026-03-03 02:13:33]  *** Error codes and diagnostics ***
[2026-03-03 02:13:33]     "exeErrorCode": 0,
[2026-03-03 02:13:33]     "exeErrorDiag": "",
[2026-03-03 02:13:33]     "pilotErrorCode": 0,
[2026-03-03 02:13:33]     "pilotErrorDiag": "",
[2026-03-03 02:13:33]  *** Listing of results directory ***
[2026-03-03 02:13:33] total 489900
[2026-03-03 02:13:33] -rw-r--r-- 1 boinc boinc    584627 Mar  2 00:37 pilot3.tar.gz
[2026-03-03 02:13:33] -rwx------ 1 boinc boinc     36322 Mar  2 00:37 runpilot2-wrapper.sh
[2026-03-03 02:13:33] -rw-r--r-- 1 boinc boinc      5111 Mar  2 00:38 queuedata.json
[2026-03-03 02:13:33] -rw-r--r-- 1 boinc boinc       100 Mar  3 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 02:13:33] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 00:10 run_atlas
[2026-03-03 02:13:33] -rw-r--r-- 1 boinc boinc       105 Mar  3 00:10 job.xml
[2026-03-03 02:13:33] -rw-r--r-- 2 boinc boinc 262600264 Mar  3 00:10 EVNT.48454547._000003.pool.root.1
[2026-03-03 02:13:33] -rw-r--r-- 2 boinc boinc    597985 Mar  3 00:10 input.tar.gz
[2026-03-03 02:13:33] -rw-r--r-- 2 boinc boinc     15845 Mar  3 00:10 start_atlas.sh
[2026-03-03 02:13:33] drwxrwx--x 2 boinc boinc      4096 Mar  3 00:10 shared
[2026-03-03 02:13:33] -rw-r--r-- 1 boinc boinc         0 Mar  3 00:10 boinc_setup_complete
[2026-03-03 02:13:33] -rw-r--r-- 1 boinc boinc      6448 Mar  3 00:10 init_data.xml
[2026-03-03 02:13:33] -rw-r--r-- 1 boinc boinc         0 Mar  3 00:10 boinc_lockfile
[2026-03-03 02:13:33] -rw-r--r-- 1 boinc boinc      2686 Mar  3 00:10 pandaJob.out
[2026-03-03 02:13:33] -rw------- 1 boinc boinc    997714 Mar  3 00:10 agis_schedconf.cvmfs.json
[2026-03-03 02:13:33] -rw------- 1 boinc boinc   1512931 Mar  3 00:10 agis_ddmendpoints.agis.ALL.json
[2026-03-03 02:13:33] -rw------- 1 boinc boinc       426 Mar  3 00:10 workernode_map.json
[2026-03-03 02:13:33] drwx------ 5 boinc boinc      4096 Mar  3 00:10 pilot3
[2026-03-03 02:13:33] -rw-r--r-- 1 boinc boinc       530 Mar  3 02:12 boinc_task_state.xml
[2026-03-03 02:13:33] -rw------- 1 boinc boinc 232462736 Mar  3 02:12 HITS.48844888._000060.pool.root.1
[2026-03-03 02:13:33] -rw------- 1 boinc boinc        95 Mar  3 02:12 pilot_heartbeat.json
[2026-03-03 02:13:33] -rw------- 1 boinc boinc      1016 Mar  3 02:13 memory_monitor_summary.json
[2026-03-03 02:13:33] -rw------- 1 boinc boinc    282969 Mar  3 02:13 log.48844888._000060.job.log.tgz.1
[2026-03-03 02:13:33] -rw------- 1 boinc boinc      6294 Mar  3 02:13 heartbeat.json
[2026-03-03 02:13:33] -rw-r--r-- 1 boinc boinc      8192 Mar  3 02:13 boinc_mmap_file
[2026-03-03 02:13:33] -rw-r--r-- 1 boinc boinc        27 Mar  3 02:13 wrapper_checkpoint.txt
[2026-03-03 02:13:33] -rw------- 1 boinc boinc      4624 Mar  3 02:13 pilotlog.txt
[2026-03-03 02:13:33] -rw------- 1 boinc boinc   1059988 Mar  3 02:13 log.48844888._000060.job.log.1
[2026-03-03 02:13:33] -rw------- 1 boinc boinc       357 Mar  3 02:13 output.list
[2026-03-03 02:13:33] -rw-r--r-- 1 boinc boinc       620 Mar  3 02:13 runtime_log
[2026-03-03 02:13:33] -rw------- 1 boinc boinc   1361920 Mar  3 02:13 result.tar.gz
[2026-03-03 02:13:33] -rw-r--r-- 1 boinc boinc      8911 Mar  3 02:13 runtime_log.err
[2026-03-03 02:13:33] -rw------- 1 boinc boinc       660 Mar  3 02:13 qJqNDm6W5G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmdzBLDmKezPCn.diag
[2026-03-03 02:13:33] -rw-r--r-- 1 boinc boinc      6836 Mar  3 02:13 stderr.txt
[2026-03-03 02:13:33] HITS file was successfully produced:
[2026-03-03 02:13:33] -rw------- 1 boinc boinc 232462736 Mar  3 02:12 shared/HITS.pool.root.1
[2026-03-03 02:13:33]  *** Contents of shared directory: ***
[2026-03-03 02:13:33] total 485396
[2026-03-03 02:13:33] -rw-r--r-- 2 boinc boinc 262600264 Mar  3 00:10 ATLAS.root_0
[2026-03-03 02:13:33] -rw-r--r-- 2 boinc boinc    597985 Mar  3 00:10 input.tar.gz
[2026-03-03 02:13:33] -rw-r--r-- 2 boinc boinc     15845 Mar  3 00:10 start_atlas.sh
[2026-03-03 02:13:33] -rw------- 1 boinc boinc 232462736 Mar  3 02:12 HITS.pool.root.1
[2026-03-03 02:13:33] -rw------- 1 boinc boinc   1361920 Mar  3 02:13 result.tar.gz
02:13:56 (508981): run_atlas exited; CPU time 21348.899470
02:13:56 (508981): called boinc_finish(0)

</stderr_txt>
]]>

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