Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:10:50 (3124617): wrapper (7.7.26015): starting
10:10:50 (3124617): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 10:10:50] Arguments: --nthreads 4
[2026-03-02 10:10:50] Threads: 4
[2026-03-02 10:10:50] Checking for CVMFS
[2026-03-02 10:10:50] No cvmfs_config command found, will try listing directly
[2026-03-02 10:10:50] CVMFS is ok
[2026-03-02 10:10:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 10:10:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 10:10:50] Further information can be found at the LHC@home message board.
[2026-03-02 10:10:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 10:10:50] Checking for apptainer binary...
[2026-03-02 10:10:50] which: no apptainer in ((null))
[2026-03-02 10:10:50] apptainer is not installed, using version from CVMFS
[2026-03-02 10:10:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 10:10:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2026-03-02 10:10:50] apptainer works
[2026-03-02 10:10:50] Set ATHENA_PROC_NUMBER=4
[2026-03-02 10:10:50] Set ATHENA_CORE_NUMBER=4
[2026-03-02 10:10:50] Starting ATLAS job with PandaID=7035659938
[2026-03-02 10:10:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 14:03:38]  *** The last 200 lines of the pilot log: ***
[2026-03-02 14:03:38] 2026-03-02 13:02:44,552 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 14:03:38] 2026-03-02 13:02:44,552 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 14:03:38] 2026-03-02 13:02:44,552 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 14:03:38] 2026-03-02 13:02:44,553 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 14:03:38] 2026-03-02 13:02:44,557 | INFO     | fitting pss+swap vs Time
[2026-03-02 14:03:38] 2026-03-02 13:02:44,557 | INFO     | sum of square deviations: 3675146117.0
[2026-03-02 14:03:38] 2026-03-02 13:02:44,559 | INFO     | sum of deviations: 25002445271.99999
[2026-03-02 14:03:38] 2026-03-02 13:02:44,559 | INFO     | mean x: 1772449616.5
[2026-03-02 14:03:38] 2026-03-02 13:02:44,559 | INFO     | mean y: 2316486.4210526315
[2026-03-02 14:03:38] 2026-03-02 13:02:44,559 | INFO     | intersect: -12055863820.731783
[2026-03-02 14:03:38] 2026-03-02 13:02:44,560 | INFO     | chi2: 1.994052513485589
[2026-03-02 14:03:38] 2026-03-02 13:02:44,560 | INFO     | sum of square deviations: 3438620752.0
[2026-03-02 14:03:38] 2026-03-02 13:02:44,562 | INFO     | sum of deviations: 37352245717.0
[2026-03-02 14:03:38] 2026-03-02 13:02:44,562 | INFO     | mean x: 1772449464.0
[2026-03-02 14:03:38] 2026-03-02 13:02:44,562 | INFO     | mean y: 2324297.8251121077
[2026-03-02 14:03:38] 2026-03-02 13:02:44,562 | INFO     | intersect: -19251025424.38146
[2026-03-02 14:03:38] 2026-03-02 13:02:44,563 | INFO     | chi2: 1.3224125383016052
[2026-03-02 14:03:38] 2026-03-02 13:02:44,563 | INFO     | current chi2=1.3224125383016052 (change=33.6821608579386 %)
[2026-03-02 14:03:38] 2026-03-02 13:02:44,563 | INFO     | sum of square deviations: 3212467674.5
[2026-03-02 14:03:38] 2026-03-02 13:02:44,565 | INFO     | sum of deviations: 36291355890.5
[2026-03-02 14:03:38] 2026-03-02 13:02:44,565 | INFO     | mean x: 1772449311.5
[2026-03-02 14:03:38] 2026-03-02 13:02:44,565 | INFO     | mean y: 2323582.3256880734
[2026-03-02 14:03:38] 2026-03-02 13:02:44,565 | INFO     | intersect: -20021096193.105953
[2026-03-02 14:03:38] 2026-03-02 13:02:44,565 | INFO     | chi2: 1.3227618809085695
[2026-03-02 14:03:38] 2026-03-02 13:02:44,566 | INFO     | current chi2=1.3227618809085695 (change=-0.026417067053292838 %)
[2026-03-02 14:03:38] 2026-03-02 13:02:44,566 | INFO     | right removable region: 217
[2026-03-02 14:03:38] 2026-03-02 13:02:44,566 | INFO     | sum of square deviations: 3438620752.0
[2026-03-02 14:03:38] 2026-03-02 13:02:44,568 | INFO     | sum of deviations: -4565475703.999999
[2026-03-02 14:03:38] 2026-03-02 13:02:44,568 | INFO     | mean x: 1772449769.0
[2026-03-02 14:03:38] 2026-03-02 13:02:44,568 | INFO     | mean y: 2335339.2825112105
[2026-03-02 14:03:38] 2026-03-02 13:02:44,568 | INFO     | intersect: 2355626655.931295
[2026-03-02 14:03:38] 2026-03-02 13:02:44,568 | INFO     | chi2: 0.6881407431241244
[2026-03-02 14:03:38] 2026-03-02 13:02:44,569 | INFO     | current chi2=0.6881407431241244 (change=65.49033997498594 %)
[2026-03-02 14:03:38] 2026-03-02 13:02:44,569 | INFO     | sum of square deviations: 3212467674.5
[2026-03-02 14:03:38] 2026-03-02 13:02:44,571 | INFO     | sum of deviations: -6337477483.499999
[2026-03-02 14:03:38] 2026-03-02 13:02:44,571 | INFO     | mean x: 1772449921.5
[2026-03-02 14:03:38] 2026-03-02 13:02:44,571 | INFO     | mean y: 2336530.3256880734
[2026-03-02 14:03:38] 2026-03-02 13:02:44,571 | INFO     | intersect: 3498982288.756833
[2026-03-02 14:03:38] 2026-03-02 13:02:44,571 | INFO     | chi2: 0.6858725441793297
[2026-03-02 14:03:38] 2026-03-02 13:02:44,571 | INFO     | current chi2=0.6858725441793297 (change=0.3296126508215713 %)
[2026-03-02 14:03:38] 2026-03-02 13:02:44,571 | INFO     | left removable region: 20
[2026-03-02 14:03:38] 2026-03-02 13:02:44,572 | INFO     | sum of square deviations: 2370641658.0
[2026-03-02 14:03:38] 2026-03-02 13:02:44,573 | INFO     | sum of deviations: 3945461212.0
[2026-03-02 14:03:38] 2026-03-02 13:02:44,573 | INFO     | mean x: 1772449891.0
[2026-03-02 14:03:38] 2026-03-02 13:02:44,573 | INFO     | mean y: 2346314.7106598984
[2026-03-02 14:03:38] 2026-03-02 13:02:44,573 | INFO     | intersect: -2947543758.9556856
[2026-03-02 14:03:38] 2026-03-02 13:02:44,574 | INFO     | chi2: 0.00037186700612211145
[2026-03-02 14:03:38] 2026-03-02 13:02:44,574 | INFO     | current memory leak: 1.66 B/s (using 197 data points, chi2=0.00)
[2026-03-02 14:03:38] 2026-03-02 13:02:44,575 | INFO     | could have reported an average CPU frequency of 2511 MHz (11 samples)
[2026-03-02 14:03:38] 2026-03-02 13:02:44,575 | INFO     | ..............................
[2026-03-02 14:03:38] 2026-03-02 13:02:44,575 | INFO     | . Timing measurements:
[2026-03-02 14:03:38] 2026-03-02 13:02:44,575 | INFO     | . get job = 0 s
[2026-03-02 14:03:38] 2026-03-02 13:02:44,575 | INFO     | . initial setup = 6 s
[2026-03-02 14:03:38] 2026-03-02 13:02:44,575 | INFO     | . payload setup = 6 s
[2026-03-02 14:03:38] 2026-03-02 13:02:44,575 | INFO     | . stage-in = 0 s
[2026-03-02 14:03:38] 2026-03-02 13:02:44,575 | INFO     | . payload execution = 13871 s
[2026-03-02 14:03:38] 2026-03-02 13:02:44,575 | INFO     | . stage-out = 1 s
[2026-03-02 14:03:38] 2026-03-02 13:02:44,575 | INFO     | . log creation = 0 s
[2026-03-02 14:03:38] 2026-03-02 13:02:44,575 | INFO     | ..............................
[2026-03-02 14:03:38] 2026-03-02 13:02:44,671 | INFO     | 
[2026-03-02 14:03:38] 2026-03-02 13:02:44,672 | INFO     | job summary report
[2026-03-02 14:03:38] 2026-03-02 13:02:44,672 | INFO     | --------------------------------------------------
[2026-03-02 14:03:38] 2026-03-02 13:02:44,672 | INFO     | PanDA job id: 7035659938
[2026-03-02 14:03:38] 2026-03-02 13:02:44,672 | INFO     | task id: 48838432
[2026-03-02 14:03:38] 2026-03-02 13:02:44,672 | INFO     | errors: (none)
[2026-03-02 14:03:38] 2026-03-02 13:02:44,672 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 14:03:38] 2026-03-02 13:02:44,672 | INFO     | pilot state: finished 
[2026-03-02 14:03:38] 2026-03-02 13:02:44,672 | INFO     | transexitcode: 0
[2026-03-02 14:03:38] 2026-03-02 13:02:44,673 | INFO     | exeerrorcode: 0
[2026-03-02 14:03:38] 2026-03-02 13:02:44,673 | INFO     | exeerrordiag: 
[2026-03-02 14:03:38] 2026-03-02 13:02:44,673 | INFO     | exitcode: 0
[2026-03-02 14:03:38] 2026-03-02 13:02:44,673 | INFO     | exitmsg: OK
[2026-03-02 14:03:38] 2026-03-02 13:02:44,673 | INFO     | cpuconsumptiontime: 53137 s
[2026-03-02 14:03:38] 2026-03-02 13:02:44,673 | INFO     | nevents: 400
[2026-03-02 14:03:38] 2026-03-02 13:02:44,673 | INFO     | neventsw: 0
[2026-03-02 14:03:38] 2026-03-02 13:02:44,673 | INFO     | pid: 3133518
[2026-03-02 14:03:38] 2026-03-02 13:02:44,673 | INFO     | pgrp: 3133518
[2026-03-02 14:03:38] 2026-03-02 13:02:44,673 | INFO     | corecount: 4
[2026-03-02 14:03:38] 2026-03-02 13:02:44,673 | INFO     | event service: False
[2026-03-02 14:03:38] 2026-03-02 13:02:44,673 | INFO     | sizes: {0: 2281814, 1: 2282331, 12: 2282331, 13880: 2312634, 13883: 2321848}
[2026-03-02 14:03:38] 2026-03-02 13:02:44,673 | INFO     | --------------------------------------------------
[2026-03-02 14:03:38] 2026-03-02 13:02:44,674 | INFO     | 
[2026-03-02 14:03:38] 2026-03-02 13:02:44,674 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2026-03-02 14:03:38] 2026-03-02 13:02:44,697 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,697 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,697 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,698 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,698 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,698 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,698 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,698 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,698 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,698 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,699 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,699 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,699 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,700 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,700 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,700 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,700 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,700 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 14:03:38] 2026-03-02 13:02:44,700 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,700 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 14:03:38] 2026-03-02 13:02:44,700 | INFO     | job 7035659938 has completed (purged errors)
[2026-03-02 14:03:38] 2026-03-02 13:02:44,701 | INFO     | overall cleanup function is called
[2026-03-02 14:03:38] 2026-03-02 13:02:45,708 | INFO     | --- collectZombieJob: --- 10, [3133518]
[2026-03-02 14:03:38] 2026-03-02 13:02:45,709 | INFO     | zombie collector waiting for pid 3133518
[2026-03-02 14:03:38] 2026-03-02 13:02:45,709 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 14:03:38] 2026-03-02 13:02:45,709 | INFO     | collected zombie processes
[2026-03-02 14:03:38] 2026-03-02 13:02:45,709 | INFO     | will attempt to kill all subprocesses of pid=3133518
[2026-03-02 14:03:38] 2026-03-02 13:02:46,085 | INFO     | process IDs to be killed: [3133518] (in reverse order)
[2026-03-02 14:03:38] 2026-03-02 13:02:46,238 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 14:03:38] 2026-03-02 13:02:46,239 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 14:03:38] 2026-03-02 13:02:46,256 | INFO     | did not find any defunct processes belonging to 3133518
[2026-03-02 14:03:38] 2026-03-02 13:02:46,271 | INFO     | did not find any defunct processes belonging to 3133518
[2026-03-02 14:03:38] 2026-03-02 13:02:46,272 | INFO     | ready for new job
[2026-03-02 14:03:38] 2026-03-02 13:02:46,272 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 14:03:38] 2026-03-02 13:02:46,275 | INFO     | **************************************
[2026-03-02 14:03:38] 2026-03-02 13:02:46,275 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 14:03:38] 2026-03-02 13:02:46,276 | INFO     | **************************************
[2026-03-02 14:03:38] 2026-03-02 13:02:46,276 | INFO     | 
[2026-03-02 14:03:38] 2026-03-02 13:02:46,281 | INFO     | architecture information:
[2026-03-02 14:03:38] 2026-03-02 13:02:46,282 | INFO     | executing command: cat /etc/os-release
[2026-03-02 14:03:38] 2026-03-02 13:02:46,299 | INFO     | cat /etc/os-release:
[2026-03-02 14:03:38] NAME="CentOS Linux"
[2026-03-02 14:03:38] VERSION="7 (Core)"
[2026-03-02 14:03:38] ID="centos"
[2026-03-02 14:03:38] ID_LIKE="rhel fedora"
[2026-03-02 14:03:38] VERSION_ID="7"
[2026-03-02 14:03:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 14:03:38] ANSI_COLOR="0;31"
[2026-03-02 14:03:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 14:03:38] HOME_URL="https://www.centos.org/"
[2026-03-02 14:03:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 14:03:38] 
[2026-03-02 14:03:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 14:03:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 14:03:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 14:03:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 14:03:38] 
[2026-03-02 14:03:38] 2026-03-02 13:02:46,300 | INFO     | **************************************
[2026-03-02 14:03:38] 2026-03-02 13:02:46,782 | WARNING  | process 3133518 can no longer be monitored (due to stat problems) - aborting
[2026-03-02 14:03:38] 2026-03-02 13:02:46,803 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2026-03-02 14:03:38] 2026-03-02 13:02:46,828 | INFO     | sufficient remaining disk space (667908308992 B)
[2026-03-02 14:03:38] 2026-03-02 13:02:46,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 14:03:38] 2026-03-02 13:02:46,829 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 14:03:38] 2026-03-02 13:02:46,829 | INFO     | update_server=False
[2026-03-02 14:03:38] 2026-03-02 13:02:46,829 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 14:03:38] 2026-03-02 13:02:46,879 | INFO     | all payload control threads have been joined
[2026-03-02 14:03:38] 2026-03-02 13:02:46,880 | INFO     | all job control threads have been joined
[2026-03-02 14:03:38] 2026-03-02 13:02:47,087 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 14:03:38] 2026-03-02 13:02:47,225 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 14:03:38] 2026-03-02 13:02:47,479 | INFO     | number of running child processes to parent process 3133518: 1
[2026-03-02 14:03:38] 2026-03-02 13:02:47,479 | INFO     | maximum number of monitored processes: 6
[2026-03-02 14:03:38] 2026-03-02 13:02:47,479 | INFO     | aborting job monitoring since job object (job id=7035659938) has expired
[2026-03-02 14:03:38] 2026-03-02 13:02:47,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 14:03:38] 2026-03-02 13:02:47,479 | INFO     | will abort loop
[2026-03-02 14:03:38] 2026-03-02 13:02:47,558 | INFO     | all data control threads have been joined
[2026-03-02 14:03:38] 2026-03-02 13:02:47,834 | INFO     | [job] retrieve thread has finished
[2026-03-02 14:03:38] 2026-03-02 13:02:47,885 | INFO     | [payload] control thread has finished
[2026-03-02 14:03:38] 2026-03-02 13:02:47,885 | INFO     | [job] control thread has finished
[2026-03-02 14:03:38] 2026-03-02 13:02:48,305 | INFO     | [payload] failed_post thread has finished
[2026-03-02 14:03:38] 2026-03-02 13:02:48,388 | INFO     | job.realtimelogging is not enabled
[2026-03-02 14:03:38] 2026-03-02 13:02:48,485 | INFO     | [job] job monitor thread has finished
[2026-03-02 14:03:38] 2026-03-02 13:02:48,564 | INFO     | [data] control thread has finished
[2026-03-02 14:03:38] 2026-03-02 13:02:48,646 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 14:03:38] 2026-03-02 13:02:48,752 | INFO     | [data] copytool_in thread has finished
[2026-03-02 14:03:38] 2026-03-02 13:02:48,967 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 14:03:38] 2026-03-02 13:02:49,000 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 14:03:38] 2026-03-02 13:02:49,067 | INFO     | [job] validate thread has finished
[2026-03-02 14:03:38] 2026-03-02 13:02:49,122 | INFO     | [payload] validate_post thread has finished
[2026-03-02 14:03:38] 2026-03-02 13:02:49,229 | INFO     | [data] copytool_out thread has finished
[2026-03-02 14:03:38] 2026-03-02 13:02:49,393 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 14:03:38] 2026-03-02 13:02:49,682 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 14:03:38] 2026-03-02 13:02:50,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 14:03:38] 2026-03-02 13:02:50,687 | INFO     | [job] queue monitor thread has finished
[2026-03-02 14:03:38] 2026-03-02 13:02:54,325 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 14:03:38] 2026-03-02 13:03:16,470 | INFO     | PID=3128697 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-02 14:03:38] 2026-03-02 13:03:16,470 | INFO     | .. there are 12 such processes running
[2026-03-02 14:03:38] 2026-03-02 13:03:16,470 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 14:03:38] 2026-03-02 13:03:16,470 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 14:03:38] 2026-03-02 13:03:16,471 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 14:03:38] 2026-03-02 13:03:31,954 | INFO     | [monitor] cgroup control has ended
[2026-03-02 14:03:38] 2026-03-02 13:03:33,367 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23128055420736)>', '<ExcThread(monitor, started 23127817205504)>']
[2026-03-02 14:03:38] 2026-03-02 13:03:33,557 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 14:03:38] 2026-03-02 13:03:33,558 | INFO     | [monitor] control thread has ended
[2026-03-02 14:03:38] 2026-03-02 13:03:38,392 | INFO     | all workflow threads have been joined
[2026-03-02 14:03:38] 2026-03-02 13:03:38,393 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 14:03:38] 2026-03-02 13:03:38,393 | INFO     | traces error code: 0
[2026-03-02 14:03:38] 2026-03-02 13:03:38,393 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 14:03:38] 2026-03-02 13:03:38,550 [wrapper] ==== pilot stdout END ====
[2026-03-02 14:03:38] 2026-03-02 13:03:38,553 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 14:03:38] 2026-03-02 13:03:38,556 [wrapper] pilotpid: 3128697
[2026-03-02 14:03:38] 2026-03-02 13:03:38,559 [wrapper] Pilot exit status: 0
[2026-03-02 14:03:38] 2026-03-02 13:03:38,570 [wrapper] pandaids: 7035659938
[2026-03-02 14:03:38] 2026-03-02 13:03:38,645 [wrapper] cleanup supervisor_pilot 3363915 3128698
[2026-03-02 14:03:38] 2026-03-02 13:03:38,648 [wrapper] Test setup, not cleaning
[2026-03-02 14:03:38] 2026-03-02 13:03:38,652 [wrapper] apfmon messages muted
[2026-03-02 14:03:38] 2026-03-02 13:03:38,655 [wrapper] ==== wrapper stdout END ====
[2026-03-02 14:03:38] 2026-03-02 13:03:38,658 [wrapper] ==== wrapper stderr END ====
[2026-03-02 14:03:38]  *** Error codes and diagnostics ***
[2026-03-02 14:03:38]     "exeErrorCode": 0,
[2026-03-02 14:03:38]     "exeErrorDiag": "",
[2026-03-02 14:03:38]     "pilotErrorCode": 0,
[2026-03-02 14:03:38]     "pilotErrorDiag": "",
[2026-03-02 14:03:38]  *** Listing of results directory ***
[2026-03-02 14:03:38] total 506088
[2026-03-02 14:03:38] -rw-r--r-- 1 boinc boinc    584627 Mar  2 00:37 pilot3.tar.gz
[2026-03-02 14:03:38] -rwx------ 1 boinc boinc     36322 Mar  2 00:37 runpilot2-wrapper.sh
[2026-03-02 14:03:38] -rw-r--r-- 1 boinc boinc      5111 Mar  2 00:37 queuedata.json
[2026-03-02 14:03:38] -rw-r--r-- 1 boinc boinc       100 Mar  2 10:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 14:03:38] -rwxr-xr-x 1 boinc boinc      7986 Mar  2 10:10 run_atlas
[2026-03-02 14:03:38] -rw-r--r-- 1 boinc boinc       105 Mar  2 10:10 job.xml
[2026-03-02 14:03:38] -rw-r--r-- 1 boinc boinc      6638 Mar  2 10:10 init_data.xml
[2026-03-02 14:03:38] -rw-r--r-- 2 boinc boinc 288283386 Mar  2 10:10 EVNT.48220101._000222.pool.root.1
[2026-03-02 14:03:38] -rw-r--r-- 2 boinc boinc     15845 Mar  2 10:10 start_atlas.sh
[2026-03-02 14:03:38] drwxrwx--x 2 boinc boinc      4096 Mar  2 10:10 shared
[2026-03-02 14:03:38] -rw-r--r-- 2 boinc boinc    597973 Mar  2 10:10 input.tar.gz
[2026-03-02 14:03:38] -rw-r--r-- 1 boinc boinc         0 Mar  2 10:10 boinc_lockfile
[2026-03-02 14:03:38] -rw-r--r-- 1 boinc boinc      2580 Mar  2 10:10 pandaJob.out
[2026-03-02 14:03:38] -rw------- 1 boinc boinc    997493 Mar  2 10:11 agis_schedconf.cvmfs.json
[2026-03-02 14:03:38] -rw------- 1 boinc boinc       452 Mar  2 10:11 workernode_map.json
[2026-03-02 14:03:38] drwx------ 5 boinc boinc      4096 Mar  2 10:11 pilot3
[2026-03-02 14:03:38] -rw------- 1 boinc boinc 221331561 Mar  2 14:02 HITS.48838432._005862.pool.root.1
[2026-03-02 14:03:38] -rw-r--r-- 1 boinc boinc       530 Mar  2 14:02 boinc_task_state.xml
[2026-03-02 14:03:38] -rw------- 1 boinc boinc        95 Mar  2 14:02 pilot_heartbeat.json
[2026-03-02 14:03:38] -rw------- 1 boinc boinc      1032 Mar  2 14:02 memory_monitor_summary.json
[2026-03-02 14:03:38] -rw------- 1 boinc boinc   1513015 Mar  2 14:02 agis_ddmendpoints.agis.ALL.json
[2026-03-02 14:03:38] -rw------- 1 boinc boinc    393121 Mar  2 14:02 log.48838432._005862.job.log.tgz.1
[2026-03-02 14:03:38] -rw------- 1 boinc boinc      6401 Mar  2 14:02 heartbeat.json
[2026-03-02 14:03:38] -rw-r--r-- 1 boinc boinc      8192 Mar  2 14:03 boinc_mmap_file
[2026-03-02 14:03:38] -rw-r--r-- 1 boinc boinc        28 Mar  2 14:03 wrapper_checkpoint.txt
[2026-03-02 14:03:38] -rw------- 1 boinc boinc      5434 Mar  2 14:03 pilotlog.txt
[2026-03-02 14:03:38] -rw------- 1 boinc boinc   1953621 Mar  2 14:03 log.48838432._005862.job.log.1
[2026-03-02 14:03:38] -rw------- 1 boinc boinc       357 Mar  2 14:03 output.list
[2026-03-02 14:03:38] -rw-r--r-- 1 boinc boinc       620 Mar  2 14:03 runtime_log
[2026-03-02 14:03:38] -rw------- 1 boinc boinc   2365440 Mar  2 14:03 result.tar.gz
[2026-03-02 14:03:38] -rw-r--r-- 1 boinc boinc      9205 Mar  2 14:03 runtime_log.err
[2026-03-02 14:03:38] -rw------- 1 boinc boinc       665 Mar  2 14:03 2wSLDmuW5G9n9Rq4apOajLDm4fhM0noT9bVooX4SDmq29KDmLoTqHm.diag
[2026-03-02 14:03:38] -rw-r--r-- 1 boinc boinc     20835 Mar  2 14:03 stderr.txt
[2026-03-02 14:03:38] HITS file was successfully produced:
[2026-03-02 14:03:38] -rw------- 1 boinc boinc 221331561 Mar  2 14:02 shared/HITS.pool.root.1
[2026-03-02 14:03:38]  *** Contents of shared directory: ***
[2026-03-02 14:03:38] total 500592
[2026-03-02 14:03:38] -rw-r--r-- 2 boinc boinc 288283386 Mar  2 10:10 ATLAS.root_0
[2026-03-02 14:03:38] -rw-r--r-- 2 boinc boinc     15845 Mar  2 10:10 start_atlas.sh
[2026-03-02 14:03:38] -rw-r--r-- 2 boinc boinc    597973 Mar  2 10:10 input.tar.gz
[2026-03-02 14:03:38] -rw------- 1 boinc boinc 221331561 Mar  2 14:02 HITS.pool.root.1
[2026-03-02 14:03:38] -rw------- 1 boinc boinc   2365440 Mar  2 14:03 result.tar.gz
14:03:40 (3124617): run_atlas exited; CPU time 53732.675465
14:03:40 (3124617): called boinc_finish(0)

</stderr_txt>
]]>

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