Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:04:06 (22120): wrapper (7.7.26015): starting
13:04:06 (22120): wrapper: running run_atlas (--nthreads 8)
[2026-03-02 13:04:06] Arguments: --nthreads 8
[2026-03-02 13:04:06] Threads: 8
[2026-03-02 13:04:06] Checking for CVMFS
[2026-03-02 13:04:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-02 13:04:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-02 13:04:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-02 13:04:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-02 13:04:09] 2.11.2.0 31778 78528 132336 156805 0 54 21136685 25165824 899 130560 156 23120780 99.792 17798871 649 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-02 13:04:09] CVMFS is ok
[2026-03-02 13:04:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 13:04:09] Checking for apptainer binary...
[2026-03-02 13:04:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-02 13:04:09] Running /usr/bin/apptainer --version
[2026-03-02 13:04:09] apptainer version 1.3.2-1.el7
[2026-03-02 13:04:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 13:04:15] cg-vwn373.simple-grid.lan
[2026-03-02 13:04:15] apptainer works
[2026-03-02 13:04:15] Set ATHENA_PROC_NUMBER=8
[2026-03-02 13:04:15] Set ATHENA_CORE_NUMBER=8
[2026-03-02 13:04:15] Starting ATLAS job with PandaID=7035712961
[2026-03-02 13:04:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 18:06:31]  *** The last 200 lines of the pilot log: ***
[2026-03-02 18:06:31] 2026-03-02 17:05:47,495 | INFO     | total number of processed events: 400 (read)
[2026-03-02 18:06:31] 2026-03-02 17:05:47,497 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-7035712961/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 18:06:31] 2026-03-02 17:05:47,497 | INFO     | extracted standard info from prmon json
[2026-03-02 18:06:31] 2026-03-02 17:05:47,498 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 18:06:31] 2026-03-02 17:05:47,498 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 18:06:31] 2026-03-02 17:05:47,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 18:06:31] 2026-03-02 17:05:47,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 18:06:31] 2026-03-02 17:05:47,504 | INFO     | fitting pss+swap vs Time
[2026-03-02 18:06:31] 2026-03-02 17:05:47,504 | INFO     | sum of square deviations: 7253894147.5
[2026-03-02 18:06:31] 2026-03-02 17:05:47,507 | INFO     | sum of deviations: 143411081404.49997
[2026-03-02 18:06:31] 2026-03-02 17:05:47,507 | INFO     | mean x: 1772462434.5
[2026-03-02 18:06:31] 2026-03-02 17:05:47,508 | INFO     | mean y: 2437891.618881119
[2026-03-02 18:06:31] 2026-03-02 17:05:47,508 | INFO     | intersect: -35039533952.99407
[2026-03-02 18:06:31] 2026-03-02 17:05:47,508 | INFO     | chi2: 9.357477582381055
[2026-03-02 18:06:31] 2026-03-02 17:05:47,509 | INFO     | sum of square deviations: 6880054580.0
[2026-03-02 18:06:31] 2026-03-02 17:05:47,516 | INFO     | sum of deviations: 179660482410.0
[2026-03-02 18:06:31] 2026-03-02 17:05:47,516 | INFO     | mean x: 1772462282.0
[2026-03-02 18:06:31] 2026-03-02 17:05:47,516 | INFO     | mean y: 2452510.533807829
[2026-03-02 18:06:31] 2026-03-02 17:05:47,516 | INFO     | intersect: -46282271678.04225
[2026-03-02 18:06:31] 2026-03-02 17:05:47,517 | INFO     | chi2: 7.834789244723173
[2026-03-02 18:06:31] 2026-03-02 17:05:47,517 | INFO     | current chi2=7.834789244723173 (change=16.272423035508105 %)
[2026-03-02 18:06:31] 2026-03-02 17:05:47,517 | INFO     | right removable region: 280
[2026-03-02 18:06:31] 2026-03-02 17:05:47,518 | INFO     | sum of square deviations: 6880054580.0
[2026-03-02 18:06:31] 2026-03-02 17:05:47,520 | INFO     | sum of deviations: 43081065048.000015
[2026-03-02 18:06:31] 2026-03-02 17:05:47,520 | INFO     | mean x: 1772462587.0
[2026-03-02 18:06:31] 2026-03-02 17:05:47,521 | INFO     | mean y: 2478798.6014234875
[2026-03-02 18:06:31] 2026-03-02 17:05:47,521 | INFO     | intersect: -11096208736.184586
[2026-03-02 18:06:31] 2026-03-02 17:05:47,521 | INFO     | chi2: 4.400647788458231
[2026-03-02 18:06:31] 2026-03-02 17:05:47,521 | INFO     | current chi2=4.400647788458231 (change=52.97185860488628 %)
[2026-03-02 18:06:31] 2026-03-02 17:05:47,522 | INFO     | sum of square deviations: 6519285025.0
[2026-03-02 18:06:31] 2026-03-02 17:05:47,525 | INFO     | sum of deviations: -31088198264.500008
[2026-03-02 18:06:31] 2026-03-02 17:05:47,525 | INFO     | mean x: 1772462739.5
[2026-03-02 18:06:31] 2026-03-02 17:05:47,525 | INFO     | mean y: 2510097.3804347827
[2026-03-02 18:06:31] 2026-03-02 17:05:47,525 | INFO     | intersect: 8454767185.497982
[2026-03-02 18:06:31] 2026-03-02 17:05:47,525 | INFO     | chi2: 1.823807530515246
[2026-03-02 18:06:31] 2026-03-02 17:05:47,526 | INFO     | current chi2=1.823807530515246 (change=58.55593044054503 %)
[2026-03-02 18:06:31] 2026-03-02 17:05:47,526 | INFO     | sum of square deviations: 6171352920.0
[2026-03-02 18:06:31] 2026-03-02 17:05:47,529 | INFO     | sum of deviations: -41122590935.0
[2026-03-02 18:06:31] 2026-03-02 17:05:47,529 | INFO     | mean x: 1772462892.0
[2026-03-02 18:06:31] 2026-03-02 17:05:47,529 | INFO     | mean y: 2514465.147601476
[2026-03-02 18:06:31] 2026-03-02 17:05:47,529 | INFO     | intersect: 11813257976.342403
[2026-03-02 18:06:31] 2026-03-02 17:05:47,530 | INFO     | chi2: 1.7491652034883531
[2026-03-02 18:06:31] 2026-03-02 17:05:47,530 | INFO     | current chi2=1.7491652034883531 (change=4.092664701620433 %)
[2026-03-02 18:06:31] 2026-03-02 17:05:47,530 | INFO     | left removable region: 30
[2026-03-02 18:06:31] 2026-03-02 17:05:47,530 | INFO     | sum of square deviations: 4844974562.5
[2026-03-02 18:06:31] 2026-03-02 17:05:47,533 | INFO     | sum of deviations: 9137020420.0
[2026-03-02 18:06:31] 2026-03-02 17:05:47,533 | INFO     | mean x: 1772463166.5
[2026-03-02 18:06:31] 2026-03-02 17:05:47,533 | INFO     | mean y: 2525152.312
[2026-03-02 18:06:31] 2026-03-02 17:05:47,533 | INFO     | intersect: -3340120291.351949
[2026-03-02 18:06:31] 2026-03-02 17:05:47,533 | INFO     | chi2: 0.0007790108258010175
[2026-03-02 18:06:31] 2026-03-02 17:05:47,534 | INFO     | current memory leak: 1.89 B/s (using 250 data points, chi2=0.00)
[2026-03-02 18:06:31] 2026-03-02 17:05:47,534 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-02 18:06:31] 2026-03-02 17:05:47,535 | INFO     | ..............................
[2026-03-02 18:06:31] 2026-03-02 17:05:47,535 | INFO     | . Timing measurements:
[2026-03-02 18:06:31] 2026-03-02 17:05:47,535 | INFO     | . get job = 0 s
[2026-03-02 18:06:31] 2026-03-02 17:05:47,535 | INFO     | . initial setup = 126 s
[2026-03-02 18:06:31] 2026-03-02 17:05:47,535 | INFO     | . payload setup = 159 s
[2026-03-02 18:06:31] 2026-03-02 17:05:47,535 | INFO     | . stage-in = 0 s
[2026-03-02 18:06:31] 2026-03-02 17:05:47,535 | INFO     | . payload execution = 17525 s
[2026-03-02 18:06:31] 2026-03-02 17:05:47,535 | INFO     | . stage-out = 4 s
[2026-03-02 18:06:31] 2026-03-02 17:05:47,536 | INFO     | . log creation = 1 s
[2026-03-02 18:06:31] 2026-03-02 17:05:47,536 | INFO     | ..............................
[2026-03-02 18:06:31] 2026-03-02 17:05:47,660 | INFO     | 
[2026-03-02 18:06:31] 2026-03-02 17:05:47,660 | INFO     | job summary report
[2026-03-02 18:06:31] 2026-03-02 17:05:47,660 | INFO     | --------------------------------------------------
[2026-03-02 18:06:31] 2026-03-02 17:05:47,660 | INFO     | PanDA job id: 7035712961
[2026-03-02 18:06:31] 2026-03-02 17:05:47,661 | INFO     | task id: 48838610
[2026-03-02 18:06:31] 2026-03-02 17:05:47,661 | INFO     | errors: (none)
[2026-03-02 18:06:31] 2026-03-02 17:05:47,661 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 18:06:31] 2026-03-02 17:05:47,661 | INFO     | pilot state: finished 
[2026-03-02 18:06:31] 2026-03-02 17:05:47,661 | INFO     | transexitcode: 0
[2026-03-02 18:06:31] 2026-03-02 17:05:47,661 | INFO     | exeerrorcode: 0
[2026-03-02 18:06:31] 2026-03-02 17:05:47,661 | INFO     | exeerrordiag: 
[2026-03-02 18:06:31] 2026-03-02 17:05:47,661 | INFO     | exitcode: 0
[2026-03-02 18:06:31] 2026-03-02 17:05:47,661 | INFO     | exitmsg: OK
[2026-03-02 18:06:31] 2026-03-02 17:05:47,661 | INFO     | cpuconsumptiontime: 66008 s
[2026-03-02 18:06:31] 2026-03-02 17:05:47,662 | INFO     | nevents: 400
[2026-03-02 18:06:31] 2026-03-02 17:05:47,662 | INFO     | neventsw: 0
[2026-03-02 18:06:31] 2026-03-02 17:05:47,662 | INFO     | pid: 30544
[2026-03-02 18:06:31] 2026-03-02 17:05:47,662 | INFO     | pgrp: 30544
[2026-03-02 18:06:31] 2026-03-02 17:05:47,662 | INFO     | corecount: 8
[2026-03-02 18:06:31] 2026-03-02 17:05:47,662 | INFO     | event service: False
[2026-03-02 18:06:31] 2026-03-02 17:05:47,662 | INFO     | sizes: {0: 2281143, 1: 2281829, 2: 2282290, 17689: 2314380, 17695: 2323574}
[2026-03-02 18:06:31] 2026-03-02 17:05:47,662 | INFO     | --------------------------------------------------
[2026-03-02 18:06:31] 2026-03-02 17:05:47,662 | INFO     | 
[2026-03-02 18:06:31] 2026-03-02 17:05:47,663 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-03-02 18:06:31] 2026-03-02 17:05:48,276 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,276 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,276 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,277 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,277 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,277 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,277 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,277 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,277 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,277 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,278 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,278 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,278 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,278 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,278 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,278 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,278 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 18:06:31] 2026-03-02 17:05:48,278 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,278 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 18:06:31] 2026-03-02 17:05:48,279 | INFO     | job 7035712961 has completed (purged errors)
[2026-03-02 18:06:31] 2026-03-02 17:05:48,279 | INFO     | overall cleanup function is called
[2026-03-02 18:06:31] 2026-03-02 17:05:49,287 | INFO     | --- collectZombieJob: --- 10, [30544]
[2026-03-02 18:06:31] 2026-03-02 17:05:49,288 | INFO     | zombie collector waiting for pid 30544
[2026-03-02 18:06:31] 2026-03-02 17:05:49,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 18:06:31] 2026-03-02 17:05:49,288 | INFO     | collected zombie processes
[2026-03-02 18:06:31] 2026-03-02 17:05:49,288 | INFO     | will attempt to kill all subprocesses of pid=30544
[2026-03-02 18:06:31] 2026-03-02 17:05:49,384 | INFO     | process IDs to be killed: [30544] (in reverse order)
[2026-03-02 18:06:31] 2026-03-02 17:05:50,354 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 18:06:31] 2026-03-02 17:05:50,354 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 18:06:31] 2026-03-02 17:05:50,357 | INFO     | did not find any defunct processes belonging to 30544
[2026-03-02 18:06:31] 2026-03-02 17:05:50,358 | INFO     | did not find any defunct processes belonging to 30544
[2026-03-02 18:06:31] 2026-03-02 17:05:50,358 | INFO     | ready for new job
[2026-03-02 18:06:31] 2026-03-02 17:05:50,359 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 18:06:31] 2026-03-02 17:05:50,361 | INFO     | **************************************
[2026-03-02 18:06:31] 2026-03-02 17:05:50,361 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 18:06:31] 2026-03-02 17:05:50,361 | INFO     | **************************************
[2026-03-02 18:06:31] 2026-03-02 17:05:50,361 | INFO     | 
[2026-03-02 18:06:31] 2026-03-02 17:05:50,362 | INFO     | pilot is running in a VM
[2026-03-02 18:06:31] 2026-03-02 17:05:50,362 | INFO     | architecture information:
[2026-03-02 18:06:31] 2026-03-02 17:05:50,368 | INFO     | executing command: cat /etc/os-release
[2026-03-02 18:06:31] 2026-03-02 17:05:50,699 | INFO     | cat /etc/os-release:
[2026-03-02 18:06:31] NAME="CentOS Linux"
[2026-03-02 18:06:31] VERSION="7 (Core)"
[2026-03-02 18:06:31] ID="centos"
[2026-03-02 18:06:31] ID_LIKE="rhel fedora"
[2026-03-02 18:06:31] VERSION_ID="7"
[2026-03-02 18:06:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 18:06:31] ANSI_COLOR="0;31"
[2026-03-02 18:06:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 18:06:31] HOME_URL="https://www.centos.org/"
[2026-03-02 18:06:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 18:06:31] 
[2026-03-02 18:06:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 18:06:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 18:06:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 18:06:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 18:06:31] 
[2026-03-02 18:06:31] 2026-03-02 17:05:50,699 | INFO     | **************************************
[2026-03-02 18:06:31] 2026-03-02 17:05:51,203 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-03-02 18:06:31] 2026-03-02 17:05:51,485 | INFO     | sufficient remaining disk space (496306749440 B)
[2026-03-02 18:06:31] 2026-03-02 17:05:51,485 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 18:06:31] 2026-03-02 17:05:51,486 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 18:06:31] 2026-03-02 17:05:51,486 | INFO     | update_server=False
[2026-03-02 18:06:31] 2026-03-02 17:05:51,486 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 18:06:31] 2026-03-02 17:05:51,646 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-02 18:06:31] 2026-03-02 17:05:51,647 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-02 18:06:31] 2026-03-02 17:05:51,647 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 18:06:31] 2026-03-02 17:05:51,647 | INFO     | will abort loop
[2026-03-02 18:06:31] 2026-03-02 17:05:51,728 | INFO     | all data control threads have been joined
[2026-03-02 18:06:31] 2026-03-02 17:05:52,249 | INFO     | all job control threads have been joined
[2026-03-02 18:06:31] 2026-03-02 17:05:52,421 | INFO     | all payload control threads have been joined
[2026-03-02 18:06:31] 2026-03-02 17:05:52,494 | INFO     | [job] retrieve thread has finished
[2026-03-02 18:06:31] 2026-03-02 17:05:52,654 | INFO     | [job] job monitor thread has finished
[2026-03-02 18:06:31] 2026-03-02 17:05:52,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 18:06:31] 2026-03-02 17:05:52,674 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 18:06:31] 2026-03-02 17:05:52,735 | INFO     | [data] control thread has finished
[2026-03-02 18:06:31] 2026-03-02 17:05:52,868 | INFO     | [payload] failed_post thread has finished
[2026-03-02 18:06:31] 2026-03-02 17:05:52,937 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 18:06:31] 2026-03-02 17:05:52,981 | INFO     | [job] validate thread has finished
[2026-03-02 18:06:31] 2026-03-02 17:05:53,209 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 18:06:31] 2026-03-02 17:05:53,219 | INFO     | [data] copytool_in thread has finished
[2026-03-02 18:06:31] 2026-03-02 17:05:53,254 | INFO     | [job] control thread has finished
[2026-03-02 18:06:31] 2026-03-02 17:05:53,334 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 18:06:31] 2026-03-02 17:05:53,427 | INFO     | [payload] control thread has finished
[2026-03-02 18:06:31] 2026-03-02 17:05:53,480 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 18:06:31] 2026-03-02 17:05:53,680 | INFO     | [job] queue monitor thread has finished
[2026-03-02 18:06:31] 2026-03-02 17:05:53,953 | INFO     | [payload] validate_post thread has finished
[2026-03-02 18:06:31] 2026-03-02 17:05:53,993 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 18:06:31] 2026-03-02 17:05:54,673 | INFO     | [data] copytool_out thread has finished
[2026-03-02 18:06:31] 2026-03-02 17:05:57,489 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 18:06:31] 2026-03-02 17:06:19,747 | INFO     | [monitor] cgroup control has ended
[2026-03-02 18:06:31] 2026-03-02 17:06:20,096 | INFO     | PID=26114 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-02 18:06:31] 2026-03-02 17:06:20,096 | INFO     | .. there are 2 such processes running
[2026-03-02 18:06:31] 2026-03-02 17:06:20,097 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 18:06:31] 2026-03-02 17:06:20,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 18:06:31] 2026-03-02 17:06:20,098 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 18:06:31] 2026-03-02 17:06:20,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140537288165184)>', '<ExcThread(monitor, started 140536631523072)>']
[2026-03-02 18:06:31] 2026-03-02 17:06:21,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 18:06:31] 2026-03-02 17:06:21,104 | INFO     | [monitor] control thread has ended
[2026-03-02 18:06:31] 2026-03-02 17:06:25,780 | INFO     | all workflow threads have been joined
[2026-03-02 18:06:31] 2026-03-02 17:06:25,781 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 18:06:31] 2026-03-02 17:06:25,781 | INFO     | traces error code: 0
[2026-03-02 18:06:31] 2026-03-02 17:06:25,781 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 18:06:31] 2026-03-02 17:06:26,210 [wrapper] ==== pilot stdout END ====
[2026-03-02 18:06:31] 2026-03-02 17:06:26,279 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 18:06:31] 2026-03-02 17:06:26,373 [wrapper] pilotpid: 26114
[2026-03-02 18:06:31] 2026-03-02 17:06:26,477 [wrapper] Pilot exit status: 0
[2026-03-02 18:06:31] 2026-03-02 17:06:26,995 [wrapper] pandaids: 7035712961
[2026-03-02 18:06:31] 2026-03-02 17:06:28,171 [wrapper] cleanup supervisor_pilot  4253 26115
[2026-03-02 18:06:31] 2026-03-02 17:06:28,291 [wrapper] Test setup, not cleaning
[2026-03-02 18:06:31] 2026-03-02 17:06:28,355 [wrapper] apfmon messages muted
[2026-03-02 18:06:31] 2026-03-02 17:06:28,421 [wrapper] ==== wrapper stdout END ====
[2026-03-02 18:06:31] 2026-03-02 17:06:28,528 [wrapper] ==== wrapper stderr END ====
[2026-03-02 18:06:31]  *** Error codes and diagnostics ***
[2026-03-02 18:06:31]     "exeErrorCode": 0,
[2026-03-02 18:06:31]     "exeErrorDiag": "",
[2026-03-02 18:06:31]     "pilotErrorCode": 0,
[2026-03-02 18:06:31]     "pilotErrorDiag": "",
[2026-03-02 18:06:31]  *** Listing of results directory ***
[2026-03-02 18:06:31] total 474016
[2026-03-02 18:06:31] -rw-r--r--. 1 boinc boinc    584627 Mar  2 00:37 pilot3.tar.gz
[2026-03-02 18:06:31] -rwx------. 1 boinc boinc     36322 Mar  2 00:37 runpilot2-wrapper.sh
[2026-03-02 18:06:31] -rw-r--r--. 1 boinc boinc      5111 Mar  2 00:38 queuedata.json
[2026-03-02 18:06:31] -rw-r--r--. 1 boinc boinc       100 Mar  2 13:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 18:06:31] -rwxr-xr-x. 1 boinc boinc      7986 Mar  2 13:04 run_atlas
[2026-03-02 18:06:31] -rw-r--r--. 1 boinc boinc       105 Mar  2 13:04 job.xml
[2026-03-02 18:06:31] -rw-r--r--. 2 boinc boinc 272883823 Mar  2 13:04 EVNT.48343779._000085.pool.root.1
[2026-03-02 18:06:31] -rw-r--r--. 2 boinc boinc     15845 Mar  2 13:04 start_atlas.sh
[2026-03-02 18:06:31] drwxrwx--x. 2 boinc boinc        68 Mar  2 13:04 shared
[2026-03-02 18:06:31] -rw-r--r--. 2 boinc boinc    597969 Mar  2 13:04 input.tar.gz
[2026-03-02 18:06:31] -rw-r--r--. 1 boinc boinc      6392 Mar  2 13:04 init_data.xml
[2026-03-02 18:06:31] -rw-r--r--. 1 boinc boinc         0 Mar  2 13:04 boinc_lockfile
[2026-03-02 18:06:31] -rw-r--r--. 1 boinc boinc      2575 Mar  2 13:04 pandaJob.out
[2026-03-02 18:06:31] -rw-------. 1 boinc boinc       415 Mar  2 13:10 workernode_map.json
[2026-03-02 18:06:31] -rw-------. 1 boinc boinc    998151 Mar  2 13:10 agis_schedconf.cvmfs.json
[2026-03-02 18:06:31] drwx------. 5 boinc boinc      4096 Mar  2 13:10 pilot3
[2026-03-02 18:06:31] -rw-------. 1 boinc boinc 202629998 Mar  2 18:04 HITS.48838610._002157.pool.root.1
[2026-03-02 18:06:31] -rw-r--r--. 1 boinc boinc       530 Mar  2 18:04 boinc_task_state.xml
[2026-03-02 18:06:31] -rw-------. 1 boinc boinc      1011 Mar  2 18:05 memory_monitor_summary.json
[2026-03-02 18:06:31] -rw-------. 1 boinc boinc   1512931 Mar  2 18:05 agis_ddmendpoints.agis.ALL.json
[2026-03-02 18:06:31] -rw-------. 1 boinc boinc    495350 Mar  2 18:05 log.48838610._002157.job.log.tgz.1
[2026-03-02 18:06:31] -rw-------. 1 boinc boinc      6310 Mar  2 18:05 heartbeat.json
[2026-03-02 18:06:31] -rw-r--r--. 1 boinc boinc        28 Mar  2 18:06 wrapper_checkpoint.txt
[2026-03-02 18:06:31] -rw-r--r--. 1 boinc boinc      8192 Mar  2 18:06 boinc_mmap_file
[2026-03-02 18:06:31] -rw-------. 1 boinc boinc        95 Mar  2 18:06 pilot_heartbeat.json
[2026-03-02 18:06:31] -rw-------. 1 boinc boinc      5067 Mar  2 18:06 pilotlog.txt
[2026-03-02 18:06:31] -rw-------. 1 boinc boinc   2484329 Mar  2 18:06 log.48838610._002157.job.log.1
[2026-03-02 18:06:31] -rw-------. 1 boinc boinc       357 Mar  2 18:06 output.list
[2026-03-02 18:06:31] -rw-r--r--. 1 boinc boinc       620 Mar  2 18:06 runtime_log
[2026-03-02 18:06:31] -rw-------. 1 boinc boinc   3000320 Mar  2 18:06 result.tar.gz
[2026-03-02 18:06:31] -rw-r--r--. 1 boinc boinc      8832 Mar  2 18:06 runtime_log.err
[2026-03-02 18:06:31] -rw-------. 1 boinc boinc       655 Mar  2 18:06 5tTNDmuW5G9n9Rq4apOajLDm4fhM0noT9bVooX4SDmx39KDm02AUnm.diag
[2026-03-02 18:06:31] -rw-r--r--. 1 boinc boinc     20670 Mar  2 18:06 stderr.txt
[2026-03-02 18:06:31] HITS file was successfully produced:
[2026-03-02 18:06:31] -rw-------. 1 boinc boinc 202629998 Mar  2 18:04 shared/HITS.pool.root.1
[2026-03-02 18:06:31]  *** Contents of shared directory: ***
[2026-03-02 18:06:31] total 467908
[2026-03-02 18:06:31] -rw-r--r--. 2 boinc boinc 272883823 Mar  2 13:04 ATLAS.root_0
[2026-03-02 18:06:31] -rw-r--r--. 2 boinc boinc     15845 Mar  2 13:04 start_atlas.sh
[2026-03-02 18:06:31] -rw-r--r--. 2 boinc boinc    597969 Mar  2 13:04 input.tar.gz
[2026-03-02 18:06:31] -rw-------. 1 boinc boinc 202629998 Mar  2 18:04 HITS.pool.root.1
[2026-03-02 18:06:31] -rw-------. 1 boinc boinc   3000320 Mar  2 18:06 result.tar.gz
18:06:33 (22120): run_atlas exited; CPU time 66209.826966
18:06:33 (22120): called boinc_finish(0)

</stderr_txt>
]]>

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