Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:35:39 (4090850): wrapper (7.7.26015): starting
16:35:39 (4090850): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 16:35:39] Arguments: --nthreads 4
[2026-03-02 16:35:39] Threads: 4
[2026-03-02 16:35:39] Checking for CVMFS
[2026-03-02 16:35:39] No cvmfs_config command found, will try listing directly
[2026-03-02 16:35:39] CVMFS is ok
[2026-03-02 16:35:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 16:35:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 16:35:39] Further information can be found at the LHC@home message board.
[2026-03-02 16:35:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 16:35:39] Checking for apptainer binary...
[2026-03-02 16:35:39] which: no apptainer in ((null))
[2026-03-02 16:35:39] apptainer is not installed, using version from CVMFS
[2026-03-02 16:35:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 16:35:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-03-02 16:35:40] apptainer works
[2026-03-02 16:35:40] Set ATHENA_PROC_NUMBER=4
[2026-03-02 16:35:40] Set ATHENA_CORE_NUMBER=4
[2026-03-02 16:35:40] Starting ATLAS job with PandaID=7035668827
[2026-03-02 16:35:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 22:17:33]  *** The last 200 lines of the pilot log: ***
[2026-03-02 22:17:33] 2026-03-02 21:16:28,210 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1720862/.job.ad'
[2026-03-02 22:17:33] 2026-03-02 21:16:28,210 | INFO     | total number of processed events: 400 (read)
[2026-03-02 22:17:33] 2026-03-02 21:16:28,221 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-7035668827/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 22:17:33] 2026-03-02 21:16:28,222 | INFO     | extracted standard info from prmon json
[2026-03-02 22:17:33] 2026-03-02 21:16:28,222 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 22:17:33] 2026-03-02 21:16:28,222 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 22:17:33] 2026-03-02 21:16:28,222 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 22:17:33] 2026-03-02 21:16:28,223 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 22:17:33] 2026-03-02 21:16:28,228 | INFO     | fitting pss+swap vs Time
[2026-03-02 22:17:33] 2026-03-02 21:16:28,229 | INFO     | sum of square deviations: 11657595320.0
[2026-03-02 22:17:33] 2026-03-02 21:16:28,232 | INFO     | sum of deviations: 43385749739.000015
[2026-03-02 22:17:33] 2026-03-02 21:16:28,232 | INFO     | mean x: 1772475961.0
[2026-03-02 22:17:33] 2026-03-02 21:16:28,232 | INFO     | mean y: 2328483.1820895523
[2026-03-02 22:17:33] 2026-03-02 21:16:28,232 | INFO     | intersect: -6594246226.390138
[2026-03-02 22:17:33] 2026-03-02 21:16:28,233 | INFO     | chi2: 1.3241390378524422
[2026-03-02 22:17:33] 2026-03-02 21:16:28,233 | INFO     | sum of square deviations: 11143362422.5
[2026-03-02 22:17:33] 2026-03-02 21:16:28,236 | INFO     | sum of deviations: 42498821694.999985
[2026-03-02 22:17:33] 2026-03-02 21:16:28,236 | INFO     | mean x: 1772475808.5
[2026-03-02 22:17:33] 2026-03-02 21:16:28,236 | INFO     | mean y: 2328220.1272727274
[2026-03-02 22:17:33] 2026-03-02 21:16:28,236 | INFO     | intersect: -6757582342.59879
[2026-03-02 22:17:33] 2026-03-02 21:16:28,236 | INFO     | chi2: 1.3244317389605407
[2026-03-02 22:17:33] 2026-03-02 21:16:28,237 | INFO     | current chi2=1.3244317389605407 (change=-0.02210501312408577 %)
[2026-03-02 22:17:33] 2026-03-02 21:16:28,237 | INFO     | right removable region: 329
[2026-03-02 22:17:33] 2026-03-02 21:16:28,237 | INFO     | sum of square deviations: 11143362422.5
[2026-03-02 22:17:33] 2026-03-02 21:16:28,240 | INFO     | sum of deviations: 548391128.5000017
[2026-03-02 22:17:33] 2026-03-02 21:16:28,240 | INFO     | mean x: 1772476113.5
[2026-03-02 22:17:33] 2026-03-02 21:16:28,240 | INFO     | mean y: 2341089.4454545453
[2026-03-02 22:17:33] 2026-03-02 21:16:28,240 | INFO     | intersect: -84886637.63258952
[2026-03-02 22:17:33] 2026-03-02 21:16:28,241 | INFO     | chi2: 0.013439052628203534
[2026-03-02 22:17:33] 2026-03-02 21:16:28,241 | INFO     | current chi2=0.013439052628203534 (change=98.98507239466335 %)
[2026-03-02 22:17:33] 2026-03-02 21:16:28,241 | INFO     | sum of square deviations: 10644478650.0
[2026-03-02 22:17:33] 2026-03-02 21:16:28,244 | INFO     | sum of deviations: -1248803650.999998
[2026-03-02 22:17:33] 2026-03-02 21:16:28,244 | INFO     | mean x: 1772476266.0
[2026-03-02 22:17:33] 2026-03-02 21:16:28,244 | INFO     | mean y: 2341633.473846154
[2026-03-02 22:17:33] 2026-03-02 21:16:28,244 | INFO     | intersect: 210287452.6231611
[2026-03-02 22:17:33] 2026-03-02 21:16:28,245 | INFO     | chi2: 0.009834658788082935
[2026-03-02 22:17:33] 2026-03-02 21:16:28,245 | INFO     | current chi2=0.009834658788082935 (change=26.820297083712042 %)
[2026-03-02 22:17:33] 2026-03-02 21:16:28,245 | INFO     | sum of square deviations: 10160711440.0
[2026-03-02 22:17:33] 2026-03-02 21:16:28,248 | INFO     | sum of deviations: -576868887.0
[2026-03-02 22:17:33] 2026-03-02 21:16:28,248 | INFO     | mean x: 1772476418.5
[2026-03-02 22:17:33] 2026-03-02 21:16:28,248 | INFO     | mean y: 2341420.75
[2026-03-02 22:17:33] 2026-03-02 21:16:28,248 | INFO     | intersect: 102972809.09438165
[2026-03-02 22:17:33] 2026-03-02 21:16:28,248 | INFO     | chi2: 0.009648284139915295
[2026-03-02 22:17:33] 2026-03-02 21:16:28,248 | INFO     | current chi2=0.009648284139915295 (change=1.8950799634602327 %)
[2026-03-02 22:17:33] 2026-03-02 21:16:28,248 | INFO     | left removable region: 30
[2026-03-02 22:17:33] 2026-03-02 21:16:28,249 | INFO     | sum of square deviations: 8288713550.0
[2026-03-02 22:17:33] 2026-03-02 21:16:28,251 | INFO     | sum of deviations: 3835550436.000001
[2026-03-02 22:17:33] 2026-03-02 21:16:28,251 | INFO     | mean x: 1772476693.0
[2026-03-02 22:17:33] 2026-03-02 21:16:28,251 | INFO     | mean y: 2339696.565217391
[2026-03-02 22:17:33] 2026-03-02 21:16:28,251 | INFO     | intersect: -817862824.8062674
[2026-03-02 22:17:33] 2026-03-02 21:16:28,252 | INFO     | chi2: 0.006174020954484013
[2026-03-02 22:17:33] 2026-03-02 21:16:28,252 | INFO     | current memory leak: 0.46 B/s (using 299 data points, chi2=0.01)
[2026-03-02 22:17:33] 2026-03-02 21:16:28,253 | INFO     | could have reported an average CPU frequency of 2697 MHz (15 samples)
[2026-03-02 22:17:33] 2026-03-02 21:16:28,253 | INFO     | ..............................
[2026-03-02 22:17:33] 2026-03-02 21:16:28,253 | INFO     | . Timing measurements:
[2026-03-02 22:17:33] 2026-03-02 21:16:28,253 | INFO     | . get job = 0 s
[2026-03-02 22:17:33] 2026-03-02 21:16:28,253 | INFO     | . initial setup = 5 s
[2026-03-02 22:17:33] 2026-03-02 21:16:28,253 | INFO     | . payload setup = 5 s
[2026-03-02 22:17:33] 2026-03-02 21:16:28,253 | INFO     | . stage-in = 0 s
[2026-03-02 22:17:33] 2026-03-02 21:16:28,253 | INFO     | . payload execution = 20410 s
[2026-03-02 22:17:33] 2026-03-02 21:16:28,253 | INFO     | . stage-out = 1 s
[2026-03-02 22:17:33] 2026-03-02 21:16:28,253 | INFO     | . log creation = 0 s
[2026-03-02 22:17:33] 2026-03-02 21:16:28,253 | INFO     | ..............................
[2026-03-02 22:17:33] 2026-03-02 21:16:28,320 | INFO     | time since job start (20435s) is within the limit (349056.0s)
[2026-03-02 22:17:33] 2026-03-02 21:16:28,343 | INFO     | 
[2026-03-02 22:17:33] 2026-03-02 21:16:28,344 | INFO     | job summary report
[2026-03-02 22:17:33] 2026-03-02 21:16:28,344 | INFO     | --------------------------------------------------
[2026-03-02 22:17:33] 2026-03-02 21:16:28,344 | INFO     | PanDA job id: 7035668827
[2026-03-02 22:17:33] 2026-03-02 21:16:28,344 | INFO     | task id: 48844516
[2026-03-02 22:17:33] 2026-03-02 21:16:28,344 | INFO     | errors: (none)
[2026-03-02 22:17:33] 2026-03-02 21:16:28,344 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 22:17:33] 2026-03-02 21:16:28,344 | INFO     | pilot state: finished 
[2026-03-02 22:17:33] 2026-03-02 21:16:28,344 | INFO     | transexitcode: 0
[2026-03-02 22:17:33] 2026-03-02 21:16:28,345 | INFO     | exeerrorcode: 0
[2026-03-02 22:17:33] 2026-03-02 21:16:28,345 | INFO     | exeerrordiag: 
[2026-03-02 22:17:33] 2026-03-02 21:16:28,345 | INFO     | exitcode: 0
[2026-03-02 22:17:33] 2026-03-02 21:16:28,345 | INFO     | exitmsg: OK
[2026-03-02 22:17:33] 2026-03-02 21:16:28,345 | INFO     | cpuconsumptiontime: 78922 s
[2026-03-02 22:17:33] 2026-03-02 21:16:28,345 | INFO     | nevents: 400
[2026-03-02 22:17:33] 2026-03-02 21:16:28,345 | INFO     | neventsw: 0
[2026-03-02 22:17:33] 2026-03-02 21:16:28,345 | INFO     | pid: 4106658
[2026-03-02 22:17:33] 2026-03-02 21:16:28,345 | INFO     | pgrp: 4106658
[2026-03-02 22:17:33] 2026-03-02 21:16:28,345 | INFO     | corecount: 4
[2026-03-02 22:17:33] 2026-03-02 21:16:28,345 | INFO     | event service: False
[2026-03-02 22:17:33] 2026-03-02 21:16:28,345 | INFO     | sizes: {0: 2282000, 1: 2282461, 11: 2282461, 20420: 2316019, 20421: 2325039, 20423: 2325095, 20424: 2325417}
[2026-03-02 22:17:33] 2026-03-02 21:16:28,345 | INFO     | --------------------------------------------------
[2026-03-02 22:17:33] 2026-03-02 21:16:28,345 | INFO     | 
[2026-03-02 22:17:33] 2026-03-02 21:16:28,346 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2026-03-02 22:17:33] 2026-03-02 21:16:28,366 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,366 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,366 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,366 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,366 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,366 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,367 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,367 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,367 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,367 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,367 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,367 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,367 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,367 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,367 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 22:17:33] 2026-03-02 21:16:28,367 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,368 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 22:17:33] 2026-03-02 21:16:28,368 | INFO     | job 7035668827 has completed (purged errors)
[2026-03-02 22:17:33] 2026-03-02 21:16:28,368 | INFO     | overall cleanup function is called
[2026-03-02 22:17:33] 2026-03-02 21:16:29,375 | INFO     | --- collectZombieJob: --- 10, [4106658]
[2026-03-02 22:17:33] 2026-03-02 21:16:29,376 | INFO     | zombie collector waiting for pid 4106658
[2026-03-02 22:17:33] 2026-03-02 21:16:29,376 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 22:17:33] 2026-03-02 21:16:29,376 | INFO     | collected zombie processes
[2026-03-02 22:17:33] 2026-03-02 21:16:29,376 | INFO     | will attempt to kill all subprocesses of pid=4106658
[2026-03-02 22:17:33] 2026-03-02 21:16:30,166 | INFO     | PID=4094668 has CPU usage=16.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-02 22:17:33] 2026-03-02 21:16:30,166 | INFO     | .. there are 13 such processes running
[2026-03-02 22:17:33] 2026-03-02 21:16:30,212 | INFO     | process IDs to be killed: [4106658] (in reverse order)
[2026-03-02 22:17:33] 2026-03-02 21:16:30,351 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 22:17:33] 2026-03-02 21:16:30,352 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 22:17:33] 2026-03-02 21:16:30,362 | INFO     | did not find any defunct processes belonging to 4106658
[2026-03-02 22:17:33] 2026-03-02 21:16:30,372 | INFO     | did not find any defunct processes belonging to 4106658
[2026-03-02 22:17:33] 2026-03-02 21:16:30,372 | INFO     | ready for new job
[2026-03-02 22:17:33] 2026-03-02 21:16:30,372 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 22:17:33] 2026-03-02 21:16:30,375 | INFO     | **************************************
[2026-03-02 22:17:33] 2026-03-02 21:16:30,375 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 22:17:33] 2026-03-02 21:16:30,375 | INFO     | **************************************
[2026-03-02 22:17:33] 2026-03-02 21:16:30,375 | INFO     | 
[2026-03-02 22:17:33] 2026-03-02 21:16:30,379 | INFO     | architecture information:
[2026-03-02 22:17:33] 2026-03-02 21:16:30,379 | INFO     | executing command: cat /etc/os-release
[2026-03-02 22:17:33] 2026-03-02 21:16:30,397 | INFO     | cat /etc/os-release:
[2026-03-02 22:17:33] NAME="CentOS Linux"
[2026-03-02 22:17:33] VERSION="7 (Core)"
[2026-03-02 22:17:33] ID="centos"
[2026-03-02 22:17:33] ID_LIKE="rhel fedora"
[2026-03-02 22:17:33] VERSION_ID="7"
[2026-03-02 22:17:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 22:17:33] ANSI_COLOR="0;31"
[2026-03-02 22:17:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 22:17:33] HOME_URL="https://www.centos.org/"
[2026-03-02 22:17:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 22:17:33] 
[2026-03-02 22:17:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 22:17:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 22:17:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 22:17:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 22:17:33] 
[2026-03-02 22:17:33] 2026-03-02 21:16:30,398 | INFO     | **************************************
[2026-03-02 22:17:33] 2026-03-02 21:16:30,901 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2026-03-02 22:17:33] 2026-03-02 21:16:30,919 | INFO     | sufficient remaining disk space (667248754688 B)
[2026-03-02 22:17:33] 2026-03-02 21:16:30,920 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 22:17:33] 2026-03-02 21:16:30,920 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 22:17:33] 2026-03-02 21:16:30,920 | INFO     | update_server=False
[2026-03-02 22:17:33] 2026-03-02 21:16:30,920 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 22:17:33] 2026-03-02 21:16:30,920 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-02 22:17:33] 2026-03-02 21:16:30,921 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 22:17:33] 2026-03-02 21:16:30,921 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 22:17:33] 2026-03-02 21:16:30,921 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 22:17:33] 2026-03-02 21:16:30,921 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 22:17:33] 2026-03-02 21:16:30,922 | INFO     | aborting loop
[2026-03-02 22:17:33] 2026-03-02 21:16:31,228 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 22:17:33] 2026-03-02 21:16:31,864 | INFO     | all data control threads have been joined
[2026-03-02 22:17:33] 2026-03-02 21:16:31,925 | INFO     | [job] retrieve thread has finished
[2026-03-02 22:17:33] 2026-03-02 21:16:31,926 | INFO     | [job] job monitor thread has finished
[2026-03-02 22:17:33] 2026-03-02 21:16:31,937 | INFO     | [payload] validate_post thread has finished
[2026-03-02 22:17:33] 2026-03-02 21:16:32,145 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 22:17:33] 2026-03-02 21:16:32,329 | INFO     | all job control threads have been joined
[2026-03-02 22:17:33] 2026-03-02 21:16:32,353 | INFO     | [job] validate thread has finished
[2026-03-02 22:17:33] 2026-03-02 21:16:32,383 | INFO     | all payload control threads have been joined
[2026-03-02 22:17:33] 2026-03-02 21:16:32,597 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 22:17:33] 2026-03-02 21:16:32,682 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 22:17:33] 2026-03-02 21:16:32,828 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 22:17:33] 2026-03-02 21:16:32,869 | INFO     | [data] control thread has finished
[2026-03-02 22:17:33] 2026-03-02 21:16:32,889 | INFO     | [payload] failed_post thread has finished
[2026-03-02 22:17:33] 2026-03-02 21:16:33,219 | INFO     | [data] copytool_in thread has finished
[2026-03-02 22:17:33] 2026-03-02 21:16:33,234 | INFO     | [data] copytool_out thread has finished
[2026-03-02 22:17:33] 2026-03-02 21:16:33,334 | INFO     | [job] control thread has finished
[2026-03-02 22:17:33] 2026-03-02 21:16:33,361 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 22:17:33] 2026-03-02 21:16:33,388 | INFO     | [payload] control thread has finished
[2026-03-02 22:17:33] 2026-03-02 21:16:33,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 22:17:33] 2026-03-02 21:16:34,366 | INFO     | [job] queue monitor thread has finished
[2026-03-02 22:17:33] 2026-03-02 21:16:37,429 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 22:17:33] 2026-03-02 21:17:27,003 | INFO     | [monitor] cgroup control has ended
[2026-03-02 22:17:33] 2026-03-02 21:17:28,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23061438666560)>', '<ExcThread(monitor, started 23061194868480)>']
[2026-03-02 22:17:33] 2026-03-02 21:17:29,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 22:17:33] 2026-03-02 21:17:29,211 | INFO     | [monitor] control thread has ended
[2026-03-02 22:17:33] 2026-03-02 21:17:33,628 | INFO     | all workflow threads have been joined
[2026-03-02 22:17:33] 2026-03-02 21:17:33,628 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 22:17:33] 2026-03-02 21:17:33,629 | INFO     | traces error code: 0
[2026-03-02 22:17:33] 2026-03-02 21:17:33,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 22:17:33] 2026-03-02 21:17:33,795 [wrapper] ==== pilot stdout END ====
[2026-03-02 22:17:33] 2026-03-02 21:17:33,797 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 22:17:33] 2026-03-02 21:17:33,800 [wrapper] pilotpid: 4094668
[2026-03-02 22:17:33] 2026-03-02 21:17:33,802 [wrapper] Pilot exit status: 0
[2026-03-02 22:17:33] 2026-03-02 21:17:33,813 [wrapper] pandaids: 7035668827
[2026-03-02 22:17:33] 2026-03-02 21:17:33,884 [wrapper] cleanup supervisor_pilot  240343 4094669
[2026-03-02 22:17:33] 2026-03-02 21:17:33,887 [wrapper] Test setup, not cleaning
[2026-03-02 22:17:33] 2026-03-02 21:17:33,890 [wrapper] apfmon messages muted
[2026-03-02 22:17:33] 2026-03-02 21:17:33,892 [wrapper] ==== wrapper stdout END ====
[2026-03-02 22:17:33] 2026-03-02 21:17:33,896 [wrapper] ==== wrapper stderr END ====
[2026-03-02 22:17:33]  *** Error codes and diagnostics ***
[2026-03-02 22:17:33]     "exeErrorCode": 0,
[2026-03-02 22:17:33]     "exeErrorDiag": "",
[2026-03-02 22:17:33]     "pilotErrorCode": 0,
[2026-03-02 22:17:33]     "pilotErrorDiag": "",
[2026-03-02 22:17:33]  *** Listing of results directory ***
[2026-03-02 22:17:33] total 420304
[2026-03-02 22:17:33] -rw-r--r-- 1 boinc boinc    584627 Mar  2 00:37 pilot3.tar.gz
[2026-03-02 22:17:33] -rwx------ 1 boinc boinc     36322 Mar  2 00:37 runpilot2-wrapper.sh
[2026-03-02 22:17:33] -rw-r--r-- 1 boinc boinc      5111 Mar  2 00:38 queuedata.json
[2026-03-02 22:17:33] -rw-r--r-- 1 boinc boinc       100 Mar  2 16:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 22:17:33] -rwxr-xr-x 1 boinc boinc      7986 Mar  2 16:35 run_atlas
[2026-03-02 22:17:33] -rw-r--r-- 1 boinc boinc       105 Mar  2 16:35 job.xml
[2026-03-02 22:17:33] -rw-r--r-- 1 boinc boinc      6639 Mar  2 16:35 init_data.xml
[2026-03-02 22:17:33] -rw-r--r-- 2 boinc boinc 223539181 Mar  2 16:35 EVNT.48453475._000003.pool.root.1
[2026-03-02 22:17:33] -rw-r--r-- 2 boinc boinc     15845 Mar  2 16:35 start_atlas.sh
[2026-03-02 22:17:33] drwxrwx--x 2 boinc boinc      4096 Mar  2 16:35 shared
[2026-03-02 22:17:33] -rw-r--r-- 2 boinc boinc    597995 Mar  2 16:35 input.tar.gz
[2026-03-02 22:17:33] -rw-r--r-- 1 boinc boinc         0 Mar  2 16:35 boinc_lockfile
[2026-03-02 22:17:33] -rw-r--r-- 1 boinc boinc      2690 Mar  2 16:35 pandaJob.out
[2026-03-02 22:17:33] -rw------- 1 boinc boinc    998123 Mar  2 16:35 agis_schedconf.cvmfs.json
[2026-03-02 22:17:33] -rw------- 1 boinc boinc       442 Mar  2 16:35 workernode_map.json
[2026-03-02 22:17:33] drwx------ 5 boinc boinc      4096 Mar  2 16:35 pilot3
[2026-03-02 22:17:33] -rw------- 1 boinc boinc 196225563 Mar  2 22:15 HITS.48844516._000058.pool.root.1
[2026-03-02 22:17:33] -rw------- 1 boinc boinc        95 Mar  2 22:15 pilot_heartbeat.json
[2026-03-02 22:17:33] -rw-r--r-- 1 boinc boinc       530 Mar  2 22:16 boinc_task_state.xml
[2026-03-02 22:17:33] -rw------- 1 boinc boinc      1033 Mar  2 22:16 memory_monitor_summary.json
[2026-03-02 22:17:33] -rw------- 1 boinc boinc   1512931 Mar  2 22:16 agis_ddmendpoints.agis.ALL.json
[2026-03-02 22:17:33] -rw------- 1 boinc boinc    485121 Mar  2 22:16 log.48844516._000058.job.log.tgz.1
[2026-03-02 22:17:33] -rw------- 1 boinc boinc      6378 Mar  2 22:16 heartbeat.json
[2026-03-02 22:17:33] -rw-r--r-- 1 boinc boinc      8192 Mar  2 22:17 boinc_mmap_file
[2026-03-02 22:17:33] -rw-r--r-- 1 boinc boinc        28 Mar  2 22:17 wrapper_checkpoint.txt
[2026-03-02 22:17:33] -rw------- 1 boinc boinc      4558 Mar  2 22:17 pilotlog.txt
[2026-03-02 22:17:33] -rw------- 1 boinc boinc   2861638 Mar  2 22:17 log.48844516._000058.job.log.1
[2026-03-02 22:17:33] -rw------- 1 boinc boinc       357 Mar  2 22:17 output.list
[2026-03-02 22:17:33] -rw-r--r-- 1 boinc boinc       620 Mar  2 22:17 runtime_log
[2026-03-02 22:17:33] -rw------- 1 boinc boinc   3368960 Mar  2 22:17 result.tar.gz
[2026-03-02 22:17:33] -rw-r--r-- 1 boinc boinc      9205 Mar  2 22:17 runtime_log.err
[2026-03-02 22:17:33] -rw------- 1 boinc boinc       665 Mar  2 22:17 iagKDmxW5G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmhxBLDmqgN2Tn.diag
[2026-03-02 22:17:33] -rw-r--r-- 1 boinc boinc     20965 Mar  2 22:17 stderr.txt
[2026-03-02 22:17:33] HITS file was successfully produced:
[2026-03-02 22:17:33] -rw------- 1 boinc boinc 196225563 Mar  2 22:15 shared/HITS.pool.root.1
[2026-03-02 22:17:33]  *** Contents of shared directory: ***
[2026-03-02 22:17:33] total 413828
[2026-03-02 22:17:33] -rw-r--r-- 2 boinc boinc 223539181 Mar  2 16:35 ATLAS.root_0
[2026-03-02 22:17:33] -rw-r--r-- 2 boinc boinc     15845 Mar  2 16:35 start_atlas.sh
[2026-03-02 22:17:33] -rw-r--r-- 2 boinc boinc    597995 Mar  2 16:35 input.tar.gz
[2026-03-02 22:17:33] -rw------- 1 boinc boinc 196225563 Mar  2 22:15 HITS.pool.root.1
[2026-03-02 22:17:33] -rw------- 1 boinc boinc   3368960 Mar  2 22:17 result.tar.gz
22:17:35 (4090850): run_atlas exited; CPU time 79737.588902
22:17:35 (4090850): called boinc_finish(0)

</stderr_txt>
]]>

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