Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:05:30 (524301): wrapper (7.7.26015): starting
19:05:30 (524301): wrapper: running run_atlas (--nthreads 4)
[2026-03-02 19:05:30] Arguments: --nthreads 4
[2026-03-02 19:05:30] Threads: 4
[2026-03-02 19:05:30] Checking for CVMFS
[2026-03-02 19:05:30] No cvmfs_config command found, will try listing directly
[2026-03-02 19:05:30] CVMFS is ok
[2026-03-02 19:05:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-02 19:05:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-02 19:05:30] Further information can be found at the LHC@home message board.
[2026-03-02 19:05:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-02 19:05:30] Checking for apptainer binary...
[2026-03-02 19:05:30] which: no apptainer in ((null))
[2026-03-02 19:05:30] apptainer is not installed, using version from CVMFS
[2026-03-02 19:05:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-02 19:05:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-02 19:05:30] apptainer works
[2026-03-02 19:05:30] Set ATHENA_PROC_NUMBER=4
[2026-03-02 19:05:30] Set ATHENA_CORE_NUMBER=4
[2026-03-02 19:05:30] Starting ATLAS job with PandaID=7035829884
[2026-03-02 19:05:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-02 22:50:13]  *** The last 200 lines of the pilot log: ***
[2026-03-02 22:50:13] 2026-03-02 21:49:26,957 | INFO     | extracted standard info from prmon json
[2026-03-02 22:50:13] 2026-03-02 21:49:26,957 | INFO     | extracted standard memory fields from prmon json
[2026-03-02 22:50:13] 2026-03-02 21:49:26,957 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-02 22:50:13] 2026-03-02 21:49:26,958 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-02 22:50:13] 2026-03-02 21:49:26,958 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-02 22:50:13] 2026-03-02 21:49:26,963 | INFO     | fitting pss+swap vs Time
[2026-03-02 22:50:13] 2026-03-02 21:49:26,963 | INFO     | sum of square deviations: 3301699115.0
[2026-03-02 22:50:13] 2026-03-02 21:49:26,965 | INFO     | sum of deviations: 22185294380.499992
[2026-03-02 22:50:13] 2026-03-02 21:49:26,965 | INFO     | mean x: 1772481448.5
[2026-03-02 22:50:13] 2026-03-02 21:49:26,965 | INFO     | mean y: 2314174.45
[2026-03-02 22:50:13] 2026-03-02 21:49:26,965 | INFO     | intersect: -11907621088.971947
[2026-03-02 22:50:13] 2026-03-02 21:49:26,965 | INFO     | chi2: 2.1656865962696674
[2026-03-02 22:50:13] 2026-03-02 21:49:26,966 | INFO     | sum of square deviations: 3081657780.0
[2026-03-02 22:50:13] 2026-03-02 21:49:26,967 | INFO     | sum of deviations: 35684442398.999985
[2026-03-02 22:50:13] 2026-03-02 21:49:26,967 | INFO     | mean x: 1772481296.0
[2026-03-02 22:50:13] 2026-03-02 21:49:26,967 | INFO     | mean y: 2323347.488372093
[2026-03-02 22:50:13] 2026-03-02 21:49:26,967 | INFO     | intersect: -20522345913.6185
[2026-03-02 22:50:13] 2026-03-02 21:49:26,968 | INFO     | chi2: 1.3158809508955225
[2026-03-02 22:50:13] 2026-03-02 21:49:26,968 | INFO     | current chi2=1.3158809508955225 (change=39.23954864189078 %)
[2026-03-02 22:50:13] 2026-03-02 21:49:26,968 | INFO     | sum of square deviations: 2871616632.5
[2026-03-02 22:50:13] 2026-03-02 21:49:26,970 | INFO     | sum of deviations: 34621448347.00001
[2026-03-02 22:50:13] 2026-03-02 21:49:26,970 | INFO     | mean x: 1772481143.5
[2026-03-02 22:50:13] 2026-03-02 21:49:26,970 | INFO     | mean y: 2322575.533333333
[2026-03-02 22:50:13] 2026-03-02 21:49:26,970 | INFO     | intersect: -21367474374.79714
[2026-03-02 22:50:13] 2026-03-02 21:49:26,970 | INFO     | chi2: 1.316284685280575
[2026-03-02 22:50:13] 2026-03-02 21:49:26,970 | INFO     | current chi2=1.316284685280575 (change=-0.030681680191336266 %)
[2026-03-02 22:50:13] 2026-03-02 21:49:26,970 | INFO     | right removable region: 209
[2026-03-02 22:50:13] 2026-03-02 21:49:26,971 | INFO     | sum of square deviations: 3081657780.0
[2026-03-02 22:50:13] 2026-03-02 21:49:26,972 | INFO     | sum of deviations: -7220815342.0
[2026-03-02 22:50:13] 2026-03-02 21:49:26,972 | INFO     | mean x: 1772481601.0
[2026-03-02 22:50:13] 2026-03-02 21:49:26,972 | INFO     | mean y: 2334341.925581395
[2026-03-02 22:50:13] 2026-03-02 21:49:26,973 | INFO     | intersect: 4155541236.2724037
[2026-03-02 22:50:13] 2026-03-02 21:49:26,973 | INFO     | chi2: 0.8710096575632373
[2026-03-02 22:50:13] 2026-03-02 21:49:26,973 | INFO     | current chi2=0.8710096575632373 (change=59.78136176012142 %)
[2026-03-02 22:50:13] 2026-03-02 21:49:26,973 | INFO     | sum of square deviations: 2871616632.5
[2026-03-02 22:50:13] 2026-03-02 21:49:26,975 | INFO     | sum of deviations: -6833342244.000001
[2026-03-02 22:50:13] 2026-03-02 21:49:26,975 | INFO     | mean x: 1772481753.5
[2026-03-02 22:50:13] 2026-03-02 21:49:26,975 | INFO     | mean y: 2334071.2285714285
[2026-03-02 22:50:13] 2026-03-02 21:49:26,975 | INFO     | intersect: 4220158381.6993546
[2026-03-02 22:50:13] 2026-03-02 21:49:26,975 | INFO     | chi2: 0.8693840616171403
[2026-03-02 22:50:13] 2026-03-02 21:49:26,976 | INFO     | current chi2=0.8693840616171403 (change=0.18663351571150538 %)
[2026-03-02 22:50:13] 2026-03-02 21:49:26,976 | INFO     | left removable region: 20
[2026-03-02 22:50:13] 2026-03-02 21:49:26,976 | INFO     | sum of square deviations: 2093397390.0
[2026-03-02 22:50:13] 2026-03-02 21:49:26,977 | INFO     | sum of deviations: 4504300268.0
[2026-03-02 22:50:13] 2026-03-02 21:49:26,977 | INFO     | mean x: 1772481723.0
[2026-03-02 22:50:13] 2026-03-02 21:49:26,977 | INFO     | mean y: 2345357.2433862435
[2026-03-02 22:50:13] 2026-03-02 21:49:26,977 | INFO     | intersect: -3811450311.974488
[2026-03-02 22:50:13] 2026-03-02 21:49:26,978 | INFO     | chi2: 0.0001673802498520066
[2026-03-02 22:50:13] 2026-03-02 21:49:26,978 | INFO     | current memory leak: 2.15 B/s (using 189 data points, chi2=0.00)
[2026-03-02 22:50:13] 2026-03-02 21:49:26,979 | INFO     | could have reported an average CPU frequency of 2524 MHz (11 samples)
[2026-03-02 22:50:13] 2026-03-02 21:49:26,979 | INFO     | ..............................
[2026-03-02 22:50:13] 2026-03-02 21:49:26,979 | INFO     | . Timing measurements:
[2026-03-02 22:50:13] 2026-03-02 21:49:26,979 | INFO     | . get job = 0 s
[2026-03-02 22:50:13] 2026-03-02 21:49:26,979 | INFO     | . initial setup = 6 s
[2026-03-02 22:50:13] 2026-03-02 21:49:26,979 | INFO     | . payload setup = 6 s
[2026-03-02 22:50:13] 2026-03-02 21:49:26,979 | INFO     | . stage-in = 0 s
[2026-03-02 22:50:13] 2026-03-02 21:49:26,979 | INFO     | . payload execution = 13395 s
[2026-03-02 22:50:13] 2026-03-02 21:49:26,979 | INFO     | . stage-out = 1 s
[2026-03-02 22:50:13] 2026-03-02 21:49:26,979 | INFO     | . log creation = 0 s
[2026-03-02 22:50:13] 2026-03-02 21:49:26,980 | INFO     | ..............................
[2026-03-02 22:50:13] 2026-03-02 21:49:27,074 | INFO     | 
[2026-03-02 22:50:13] 2026-03-02 21:49:27,076 | INFO     | job summary report
[2026-03-02 22:50:13] 2026-03-02 21:49:27,076 | INFO     | --------------------------------------------------
[2026-03-02 22:50:13] 2026-03-02 21:49:27,076 | INFO     | PanDA job id: 7035829884
[2026-03-02 22:50:13] 2026-03-02 21:49:27,076 | INFO     | task id: 48838610
[2026-03-02 22:50:13] 2026-03-02 21:49:27,076 | INFO     | errors: (none)
[2026-03-02 22:50:13] 2026-03-02 21:49:27,076 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-02 22:50:13] 2026-03-02 21:49:27,076 | INFO     | pilot state: finished 
[2026-03-02 22:50:13] 2026-03-02 21:49:27,076 | INFO     | transexitcode: 0
[2026-03-02 22:50:13] 2026-03-02 21:49:27,076 | INFO     | exeerrorcode: 0
[2026-03-02 22:50:13] 2026-03-02 21:49:27,076 | INFO     | exeerrordiag: 
[2026-03-02 22:50:13] 2026-03-02 21:49:27,077 | INFO     | exitcode: 0
[2026-03-02 22:50:13] 2026-03-02 21:49:27,077 | INFO     | exitmsg: OK
[2026-03-02 22:50:13] 2026-03-02 21:49:27,077 | INFO     | cpuconsumptiontime: 51373 s
[2026-03-02 22:50:13] 2026-03-02 21:49:27,077 | INFO     | nevents: 400
[2026-03-02 22:50:13] 2026-03-02 21:49:27,077 | INFO     | neventsw: 0
[2026-03-02 22:50:13] 2026-03-02 21:49:27,077 | INFO     | pid: 533088
[2026-03-02 22:50:13] 2026-03-02 21:49:27,077 | INFO     | pgrp: 533088
[2026-03-02 22:50:13] 2026-03-02 21:49:27,077 | INFO     | corecount: 4
[2026-03-02 22:50:13] 2026-03-02 21:49:27,077 | INFO     | event service: False
[2026-03-02 22:50:13] 2026-03-02 21:49:27,077 | INFO     | sizes: {0: 2281874, 1: 2282278, 11: 2282278, 13406: 2312583, 13408: 2321603, 13409: 2321659, 13410: 2321981}
[2026-03-02 22:50:13] 2026-03-02 21:49:27,077 | INFO     | --------------------------------------------------
[2026-03-02 22:50:13] 2026-03-02 21:49:27,077 | INFO     | 
[2026-03-02 22:50:13] 2026-03-02 21:49:27,078 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2026-03-02 22:50:13] 2026-03-02 21:49:27,101 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,101 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,102 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,102 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,102 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,102 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,102 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,102 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,102 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,102 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,102 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,102 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,102 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,103 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,103 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,103 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,103 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,103 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-02 22:50:13] 2026-03-02 21:49:27,103 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,103 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-02 22:50:13] 2026-03-02 21:49:27,103 | INFO     | job 7035829884 has completed (purged errors)
[2026-03-02 22:50:13] 2026-03-02 21:49:27,103 | INFO     | overall cleanup function is called
[2026-03-02 22:50:13] 2026-03-02 21:49:28,108 | INFO     | --- collectZombieJob: --- 10, [533088]
[2026-03-02 22:50:13] 2026-03-02 21:49:28,109 | INFO     | zombie collector waiting for pid 533088
[2026-03-02 22:50:13] 2026-03-02 21:49:28,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-02 22:50:13] 2026-03-02 21:49:28,109 | INFO     | collected zombie processes
[2026-03-02 22:50:13] 2026-03-02 21:49:28,109 | INFO     | will attempt to kill all subprocesses of pid=533088
[2026-03-02 22:50:13] 2026-03-02 21:49:28,479 | INFO     | process IDs to be killed: [533088] (in reverse order)
[2026-03-02 22:50:13] 2026-03-02 21:49:28,605 | WARNING  | found no corresponding commands to process id(s)
[2026-03-02 22:50:13] 2026-03-02 21:49:28,605 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-02 22:50:13] 2026-03-02 21:49:28,616 | INFO     | did not find any defunct processes belonging to 533088
[2026-03-02 22:50:13] 2026-03-02 21:49:28,627 | INFO     | did not find any defunct processes belonging to 533088
[2026-03-02 22:50:13] 2026-03-02 21:49:28,627 | INFO     | ready for new job
[2026-03-02 22:50:13] 2026-03-02 21:49:28,627 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-02 22:50:13] 2026-03-02 21:49:28,630 | INFO     | **************************************
[2026-03-02 22:50:13] 2026-03-02 21:49:28,630 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-02 22:50:13] 2026-03-02 21:49:28,630 | INFO     | **************************************
[2026-03-02 22:50:13] 2026-03-02 21:49:28,630 | INFO     | 
[2026-03-02 22:50:13] 2026-03-02 21:49:28,634 | INFO     | architecture information:
[2026-03-02 22:50:13] 2026-03-02 21:49:28,635 | INFO     | executing command: cat /etc/os-release
[2026-03-02 22:50:13] 2026-03-02 21:49:28,654 | INFO     | cat /etc/os-release:
[2026-03-02 22:50:13] NAME="CentOS Linux"
[2026-03-02 22:50:13] VERSION="7 (Core)"
[2026-03-02 22:50:13] ID="centos"
[2026-03-02 22:50:13] ID_LIKE="rhel fedora"
[2026-03-02 22:50:13] VERSION_ID="7"
[2026-03-02 22:50:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-02 22:50:13] ANSI_COLOR="0;31"
[2026-03-02 22:50:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-02 22:50:13] HOME_URL="https://www.centos.org/"
[2026-03-02 22:50:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-02 22:50:13] 
[2026-03-02 22:50:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-02 22:50:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-02 22:50:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-02 22:50:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-02 22:50:13] 
[2026-03-02 22:50:13] 2026-03-02 21:49:28,655 | INFO     | **************************************
[2026-03-02 22:50:13] 2026-03-02 21:49:29,158 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2026-03-02 22:50:13] 2026-03-02 21:49:29,178 | INFO     | sufficient remaining disk space (673965932544 B)
[2026-03-02 22:50:13] 2026-03-02 21:49:29,179 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-02 22:50:13] 2026-03-02 21:49:29,179 | INFO     | current server update state: UPDATING_FINAL
[2026-03-02 22:50:13] 2026-03-02 21:49:29,179 | INFO     | update_server=False
[2026-03-02 22:50:13] 2026-03-02 21:49:29,179 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-02 22:50:13] 2026-03-02 21:49:29,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-02 22:50:13] 2026-03-02 21:49:29,625 | WARNING  | process 533088 can no longer be monitored (due to stat problems) - aborting
[2026-03-02 22:50:13] 2026-03-02 21:49:29,854 | INFO     | all data control threads have been joined
[2026-03-02 22:50:13] 2026-03-02 21:49:29,895 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-02 22:50:13] 2026-03-02 21:49:30,184 | INFO     | [job] retrieve thread has finished
[2026-03-02 22:50:13] 2026-03-02 21:49:30,197 | INFO     | all job control threads have been joined
[2026-03-02 22:50:13] 2026-03-02 21:49:30,264 | INFO     | number of running child processes to parent process 533088: 1
[2026-03-02 22:50:13] 2026-03-02 21:49:30,264 | INFO     | maximum number of monitored processes: 6
[2026-03-02 22:50:13] 2026-03-02 21:49:30,264 | INFO     | aborting job monitoring since job object (job id=7035829884) has expired
[2026-03-02 22:50:13] 2026-03-02 21:49:30,264 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-02 22:50:13] 2026-03-02 21:49:30,264 | INFO     | will abort loop
[2026-03-02 22:50:13] 2026-03-02 21:49:30,273 | INFO     | [job] create_data_payload thread has finished
[2026-03-02 22:50:13] 2026-03-02 21:49:30,280 | INFO     | all payload control threads have been joined
[2026-03-02 22:50:13] 2026-03-02 21:49:30,439 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-02 22:50:13] 2026-03-02 21:49:30,441 | INFO     | [payload] validate_pre thread has finished
[2026-03-02 22:50:13] 2026-03-02 21:49:30,527 | INFO     | [payload] validate_post thread has finished
[2026-03-02 22:50:13] 2026-03-02 21:49:30,859 | INFO     | [data] control thread has finished
[2026-03-02 22:50:13] 2026-03-02 21:49:30,945 | INFO     | [data] copytool_in thread has finished
[2026-03-02 22:50:13] 2026-03-02 21:49:31,118 | INFO     | [payload] failed_post thread has finished
[2026-03-02 22:50:13] 2026-03-02 21:49:31,184 | INFO     | [data] copytool_out thread has finished
[2026-03-02 22:50:13] 2026-03-02 21:49:31,203 | INFO     | [job] control thread has finished
[2026-03-02 22:50:13] 2026-03-02 21:49:31,268 | INFO     | [job] job monitor thread has finished
[2026-03-02 22:50:13] 2026-03-02 21:49:31,286 | INFO     | [payload] control thread has finished
[2026-03-02 22:50:13] 2026-03-02 21:49:31,503 | INFO     | [job] validate thread has finished
[2026-03-02 22:50:13] 2026-03-02 21:49:31,564 | INFO     | [payload] execute_payloads thread has finished
[2026-03-02 22:50:13] 2026-03-02 21:49:32,083 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-02 22:50:13] 2026-03-02 21:49:32,328 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-02 22:50:13] 2026-03-02 21:49:33,088 | INFO     | [job] queue monitor thread has finished
[2026-03-02 22:50:13] 2026-03-02 21:49:36,333 | INFO     | [data] queue_monitor thread has finished
[2026-03-02 22:50:13] 2026-03-02 21:50:00,207 | INFO     | PID=528099 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-02 22:50:13] 2026-03-02 21:50:00,207 | INFO     | .. there are 13 such processes running
[2026-03-02 22:50:13] 2026-03-02 21:50:00,208 | INFO     | found 0 job(s) in 20 queues
[2026-03-02 22:50:13] 2026-03-02 21:50:00,208 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-02 22:50:13] 2026-03-02 21:50:00,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-02 22:50:13] 2026-03-02 21:50:08,116 | INFO     | [monitor] cgroup control has ended
[2026-03-02 22:50:13] 2026-03-02 21:50:08,303 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22366971385664)>', '<ExcThread(monitor, started 22366725076736)>']
[2026-03-02 22:50:13] 2026-03-02 21:50:09,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-02 22:50:13] 2026-03-02 21:50:09,253 | INFO     | [monitor] control thread has ended
[2026-03-02 22:50:13] 2026-03-02 21:50:13,328 | INFO     | all workflow threads have been joined
[2026-03-02 22:50:13] 2026-03-02 21:50:13,329 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-02 22:50:13] 2026-03-02 21:50:13,329 | INFO     | traces error code: 0
[2026-03-02 22:50:13] 2026-03-02 21:50:13,329 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-02 22:50:13] 2026-03-02 21:50:13,483 [wrapper] ==== pilot stdout END ====
[2026-03-02 22:50:13] 2026-03-02 21:50:13,486 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-02 22:50:13] 2026-03-02 21:50:13,488 [wrapper] pilotpid: 528099
[2026-03-02 22:50:13] 2026-03-02 21:50:13,491 [wrapper] Pilot exit status: 0
[2026-03-02 22:50:13] 2026-03-02 21:50:13,502 [wrapper] pandaids: 7035829884
[2026-03-02 22:50:13] 2026-03-02 21:50:13,574 [wrapper] cleanup supervisor_pilot  719249 528100
[2026-03-02 22:50:13] 2026-03-02 21:50:13,577 [wrapper] Test setup, not cleaning
[2026-03-02 22:50:13] 2026-03-02 21:50:13,580 [wrapper] apfmon messages muted
[2026-03-02 22:50:13] 2026-03-02 21:50:13,583 [wrapper] ==== wrapper stdout END ====
[2026-03-02 22:50:13] 2026-03-02 21:50:13,585 [wrapper] ==== wrapper stderr END ====
[2026-03-02 22:50:13]  *** Error codes and diagnostics ***
[2026-03-02 22:50:13]     "exeErrorCode": 0,
[2026-03-02 22:50:13]     "exeErrorDiag": "",
[2026-03-02 22:50:13]     "pilotErrorCode": 0,
[2026-03-02 22:50:13]     "pilotErrorDiag": "",
[2026-03-02 22:50:13]  *** Listing of results directory ***
[2026-03-02 22:50:13] total 480576
[2026-03-02 22:50:13] -rw-r--r-- 1 boinc boinc    584627 Mar  2 03:17 pilot3.tar.gz
[2026-03-02 22:50:13] -rwx------ 1 boinc boinc     36322 Mar  2 03:30 runpilot2-wrapper.sh
[2026-03-02 22:50:13] -rw-r--r-- 1 boinc boinc      5111 Mar  2 03:31 queuedata.json
[2026-03-02 22:50:13] -rw-r--r-- 1 boinc boinc       100 Mar  2 19:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-02 22:50:13] -rwxr-xr-x 1 boinc boinc      7986 Mar  2 19:05 run_atlas
[2026-03-02 22:50:13] -rw-r--r-- 1 boinc boinc       105 Mar  2 19:05 job.xml
[2026-03-02 22:50:13] -rw-r--r-- 2 boinc boinc 275190742 Mar  2 19:05 EVNT.48343779._000090.pool.root.1
[2026-03-02 22:50:13] -rw-r--r-- 1 boinc boinc      6639 Mar  2 19:05 init_data.xml
[2026-03-02 22:50:13] -rw-r--r-- 2 boinc boinc     15845 Mar  2 19:05 start_atlas.sh
[2026-03-02 22:50:13] drwxrwx--x 2 boinc boinc      4096 Mar  2 19:05 shared
[2026-03-02 22:50:13] -rw-r--r-- 2 boinc boinc    597972 Mar  2 19:05 input.tar.gz
[2026-03-02 22:50:13] -rw-r--r-- 1 boinc boinc         0 Mar  2 19:05 boinc_lockfile
[2026-03-02 22:50:13] -rw-r--r-- 1 boinc boinc      2578 Mar  2 19:05 pandaJob.out
[2026-03-02 22:50:13] -rw------- 1 boinc boinc    998486 Mar  2 19:05 agis_schedconf.cvmfs.json
[2026-03-02 22:50:13] -rw------- 1 boinc boinc       452 Mar  2 19:05 workernode_map.json
[2026-03-02 22:50:13] drwx------ 5 boinc boinc      4096 Mar  2 19:05 pilot3
[2026-03-02 22:50:13] -rw------- 1 boinc boinc 208397943 Mar  2 22:48 HITS.48838610._002310.pool.root.1
[2026-03-02 22:50:13] -rw-r--r-- 1 boinc boinc       530 Mar  2 22:48 boinc_task_state.xml
[2026-03-02 22:50:13] -rw------- 1 boinc boinc      1034 Mar  2 22:49 memory_monitor_summary.json
[2026-03-02 22:50:13] -rw------- 1 boinc boinc   1512931 Mar  2 22:49 agis_ddmendpoints.agis.ALL.json
[2026-03-02 22:50:13] -rw------- 1 boinc boinc    407138 Mar  2 22:49 log.48838610._002310.job.log.tgz.1
[2026-03-02 22:50:13] -rw------- 1 boinc boinc      6401 Mar  2 22:49 heartbeat.json
[2026-03-02 22:50:13] -rw-r--r-- 1 boinc boinc      8192 Mar  2 22:49 boinc_mmap_file
[2026-03-02 22:50:13] -rw-r--r-- 1 boinc boinc        28 Mar  2 22:49 wrapper_checkpoint.txt
[2026-03-02 22:50:13] -rw------- 1 boinc boinc        95 Mar  2 22:50 pilot_heartbeat.json
[2026-03-02 22:50:13] -rw------- 1 boinc boinc      5359 Mar  2 22:50 pilotlog.txt
[2026-03-02 22:50:13] -rw------- 1 boinc boinc   1891044 Mar  2 22:50 log.48838610._002310.job.log.1
[2026-03-02 22:50:13] -rw------- 1 boinc boinc       357 Mar  2 22:50 output.list
[2026-03-02 22:50:13] -rw-r--r-- 1 boinc boinc       620 Mar  2 22:50 runtime_log
[2026-03-02 22:50:13] -rw------- 1 boinc boinc   2314240 Mar  2 22:50 result.tar.gz
[2026-03-02 22:50:13] -rw------- 1 boinc boinc       665 Mar  2 22:50 GRtNDmpE8G9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxVCLDmvqfICo.diag
[2026-03-02 22:50:13] -rw-r--r-- 1 boinc boinc      9205 Mar  2 22:50 runtime_log.err
[2026-03-02 22:50:13] -rw-r--r-- 1 boinc boinc     20851 Mar  2 22:50 stderr.txt
[2026-03-02 22:50:13] HITS file was successfully produced:
[2026-03-02 22:50:13] -rw------- 1 boinc boinc 208397943 Mar  2 22:48 shared/HITS.pool.root.1
[2026-03-02 22:50:13]  *** Contents of shared directory: ***
[2026-03-02 22:50:13] total 475124
[2026-03-02 22:50:13] -rw-r--r-- 2 boinc boinc 275190742 Mar  2 19:05 ATLAS.root_0
[2026-03-02 22:50:13] -rw-r--r-- 2 boinc boinc     15845 Mar  2 19:05 start_atlas.sh
[2026-03-02 22:50:13] -rw-r--r-- 2 boinc boinc    597972 Mar  2 19:05 input.tar.gz
[2026-03-02 22:50:13] -rw------- 1 boinc boinc 208397943 Mar  2 22:48 HITS.pool.root.1
[2026-03-02 22:50:13] -rw------- 1 boinc boinc   2314240 Mar  2 22:50 result.tar.gz
22:50:15 (524301): run_atlas exited; CPU time 51898.938867
22:50:15 (524301): called boinc_finish(0)

</stderr_txt>
]]>

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